News from the group:
IAESTE Research Exchange Fellowships available (apply)
CAMDA 2022
ISMB Conference Track,
11-12 July, Madison, USA
(read more)
NVIDIA GTC Best Poster Award
for MM Kańduła
at GTC'18
Outstanding Presentation Prize
for MM Kańduła
at CAMDA'17
Outstanding Presentation Prize
for PP Łabaj
at CAMDA'15 (photo)
Austrian Marshall Plan Foundation scholarship
for MM Kańduła
at Boston University
OeAW APART fellowship
for PP Łabaj

Sequencing Quality Control (SEQC) project,
MAQC Consortium 2011–2014 (read more)
Host–parasite interactions in biocontrol, WWTF grant 2010–2013 (read more)

Power and limitations of RNA-Seq,
FDA SEQC, Nature Biotechnology (read more)
Characterization and improvement of RNA-Seq precision,
Bioinformatics (read more)
Impact of heavy tails in microarray analysis, Bioinformatics (read more)
Novel conserved repeats in sorting signals,
FEBS Journal (read more)
Sound sensation gene,
Nature communications
(read more)
RNA interference in ageing research,
Gerontology (read more)

CAMDA 2008

  • Keynote, ‘Towards cracking the code of transcription and chromatin regulation’,
    Eran Segal, Weizmann Institute, Israel.
  • ‘Analysis of comparative genomic hybridization and SNP arrays for the detection of chromosomal aberrations in single cells’,
    Peter Konings, et al., Katholieke Universiteit Leuven, Belgium.
  • Introduction to the Emerald dataset,
    Ron Peterson, Novartis Institute of Biomedical Research, Cambridge, Massachusetts, U.S.A.
  • Keynote, ‘Muddling or modelling your way through normalization?’,
    Ernst Wit, University of Groningen, The Netherlands.
  • ‘Metrology for Gene Expression: Measurement Batch Effects, Probe Sensitivity, Gene-List Reproducibility’,
    Walter Liggett, NIST, Gaithersburg, Maryland, U.S.A.
  • ‘Intrinsic metrics for hybridization control and global expression profiling – the fruit fly developmental time series’,
    Hans Binder, Mario Fasold, and Jan Brücker, IZBI, Universität Leipzig, Germany.
  • ‘Experiment quality – direct route to reliable data’,
    Ralph Beneke, Tecan Austria.
  • Keynote, ‘An array of FDA efforts in pharmacogenomics’,
    Weida Tong, MAQC consortium, Toxicoinformatics, FDA, Jefferson, Arizona, U.S.A.
  • ‘Identification of spatial biases in Affymetrix oligonucleotide microarrays’,
    Jose Manuel Arteaga-Salas, et al., BEAMS, University of Essex, Colchester, U.K.
  • ‘EMERALD microarray platform comparison based on hypothesis tests under order restrictions’,
    Florian Klinglmüller and Thomas Tuechler, Department of Statistics and Probability Theory, University of Technology Vienna, Austria.
  • ‘Exploiting the EMERALD mixture design for model based microarray platform comparisons by Bayesian inference of technical and biological variance components’.
    Thomas Tuechler, et al., Chair of Bioinformatics, Boku University Vienna, Austria.
  • Keynote, ‘Multiple Testing on the Graph of Gene Ontology’,
    Jelle Goeman, Leiden University Medical Center, The Netherlands.
  • ‘Effect of Single Nucleotide Polymorphism (SNP) in Affymetrix probes’,
    Olivia Sanchez-Graillet, William B. Langdon, and Andrew Harrison, BEAMS, University of Essex, Colchester, U.K.
  • ‘Extending pathways with inferred regulatory interactions from microarray data and protein domain signatures’,
    Christian Bender, et al., Molecular Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.
  • ‘Modeling of microarray time-course data with dynamic Bayesian networks and within-time-point interaction’,
    Brian Godsey and Peter Sykacek. Chair of Bioinformatics, Boku University Vienna, Austria.
  • ‘Inference of Key Transcriptional Regulators in Endothelial Cell Apoptosis using Bayesian State Space Models’,
    David Wild, Claudia Rangel-Escareno, and Irma Aguilar-Delfin, Systems Biology Centre, University of Warwick, U.K.