ID expr.6.4.exp_090507.CEL expr.6.4.exp_150607.CEL expr.6.5.exp_090507.CEL expr.6.5.exp_150607.CEL expr.6.7.exp_1_040507.CEL expr.6.7.exp_150607.CEL expr.7.2.exp_1_040507.CEL expr.7.2.exp_150607.CEL expr.6.4.3_exp160807.CEL expr.6.4.4_exp160807.CEL expr.6.5.11_exp160807.CEL expr.6.5.2_exp160807.CEL expr.6.5.6_exp160807.CEL expr.6.5.8_exp160807.CEL expr.6.7.19_exp160807.CEL expr.6.7.20_exp160807.CEL expr.6.7.21_exp160807.CEL expr.6.7.22_exp160807.CEL expr.7.2.1_exp160807.CEL se.expr.6.4.exp_090507.CEL se.expr.6.4.exp_150607.CEL se.expr.6.5.exp_090507.CEL se.expr.6.5.exp_150607.CEL se.expr.6.7.exp_1_040507.CEL se.expr.6.7.exp_150607.CEL se.expr.7.2.exp_1_040507.CEL se.expr.7.2.exp_150607.CEL se.expr.6.4.3_exp160807.CEL se.expr.6.4.4_exp160807.CEL se.expr.6.5.11_exp160807.CEL se.expr.6.5.2_exp160807.CEL se.expr.6.5.6_exp160807.CEL se.expr.6.5.8_exp160807.CEL se.expr.6.7.19_exp160807.CEL se.expr.6.7.20_exp160807.CEL se.expr.6.7.21_exp160807.CEL se.expr.6.7.22_exp160807.CEL se.expr.7.2.1_exp160807.CEL Chr ChrList StrandList From.Min From.Max From.Mean start end strand type Note isChr5 isClean IDlist Short.description Currator.summary Description logFC t P.Value adj.P.Val B A M M.se AT5G24470_at 10.7571532265792 10.8836709072374 10.7497195710861 10.6958660080735 11.7220710777589 11.4320229187142 5.18287687902041 5.01199791446558 4.33535175693041 3.10749041503632 7.36364166390188 7.82243771702625 7.42433341542747 8.29731181890888 7.25517514963212 6.45867413434506 7.64667743477548 7.11556724275924 2.98810060819448 0.324507023440168 0.325627787489842 0.324790715410429 0.324366628240032 0.329027873993121 0.327694081493219 0.323258703320552 0.315115446670247 0.342864973621369 0.338106906385165 0.323222812378649 0.31872196745625 0.314068927010782 0.314936354452093 0.316513494786742 0.315583830701753 0.322985943081892 0.331813982193778 0.343187346813134 5 5 - 8356230 8356862 8356634.364 8355954 8358876 - gene protein_coding_gene TRUE TRUE AT5G24470.1 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Identical to Two-component response regulator-like APRR5 (Pseudo-response regulator 5) (APRR5) [Arabidopsis Thaliana] (GB:Q6LA42;GB:Q9FGE3); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to pseudo-response regulator 95 homologue [Lemna paucicostata] (GB:BAE72699.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 3.56849577872958 40.4257352554862 6.11110737945045e-13 1.86932654432221e-08 22.9819831352057 15.0044014372756 3.56849577872958 0.062929701517431 AT5G60610_at 0.47193487041811 0.688018269584166 4.24062957569215 4.22536409461309 5.58717051661902 5.17055330005376 0.720959449774976 0.781845461405405 1.03699448949133 0.758594067593838 4.05851274524134 3.28383123783477 4.75574453292965 4.15852659599434 3.8829157044447 3.99697744133215 4.55421778302649 3.88404251769284 0.778331539177667 0.29954677370812 0.304003204741207 0.303697718850592 0.303856131894717 0.294141939412978 0.303733924239375 0.291778205703560 0.304299574874961 0.294854880549899 0.307284041725415 0.29790113383038 0.291938257436025 0.291906977013954 0.295246675186265 0.291778205703560 0.291778205703560 0.303849956619557 0.296482659744897 0.309604462758001 5 5 + 24381851 24382575 24382121 24380817 24382754 + gene protein_coding_gene TRUE TRUE AT5G60610.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G26860.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE78248.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 3.67705628166997 39.123563715641 8.62291343488304e-13 1.86932654432221e-08 22.8807463758895 5.20071915988657 3.67705628166997 0.081941352588263 AT5G62360_at 11.0292364077358 11.1407589789803 10.4285717300907 10.5164332416279 11.8739783777667 11.7544467663919 6.09366406826987 5.47718533359317 5.52507638270376 4.94070747842891 10.3030647577165 10.1976792221581 9.77980143801336 10.2836787202326 9.85148293171796 10.7925883926414 9.19747054670967 9.65482522359098 4.32977635292743 0.193576234331100 0.187991177744669 0.196415454662793 0.187991177744669 0.196485865983776 0.198642133879920 0.233688091768486 0.239347734071791 0.228871328709853 0.249217750914306 0.187991177744669 0.187991177744669 0.193804800401371 0.191440910368760 0.187991177744669 0.192885047498908 0.200204830832159 0.194854778952713 0.222719896290017 5 5 + 25058060 25058510 25058216.455 25057882 25058687 + gene protein_coding_gene TRUE TRUE AT5G62360.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 3.89193341561769 37.1289311857008 1.49455770855690e-12 1.99666435808499e-08 22.7088485085078 17.2589980174492 3.89193341561769 0.111414249112432 AT5G67480_at 8.81876619350765 8.763141102903 9.6232824702716 9.64956235519845 9.8117187350077 9.576647497577 5.07732546687054 5.3147989974435 7.72730227572033 5.08159870824778 10.2928366098068 8.95248953916347 8.79831324781676 9.89700373493947 9.08335681177646 8.92818805961064 8.06960677645495 9.32164625948246 3.66957016752449 0.156252351953723 0.155554814704337 0.160960916969826 0.155554814704337 0.161013790899373 0.164031634606082 0.184804956628814 0.203279698262291 0.192990204020428 0.180602951725731 0.15995786919407 0.155554814704337 0.159647041962378 0.156370925846118 0.162345722728574 0.155554814704337 0.162138800947177 0.155554814704337 0.178749442370136 5 5 - 26948406 26948910 26948585.818 26948165 26950319 - gene protein_coding_gene TRUE TRUE AT5G67480.1|AT5G67480.2 BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator|BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding similar to BT5 (BTB and TAZ domain protein 5), protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT4G37610.1); similar to Zinc finger, TAZ-type; BTB/POZ [Medicago truncatula] (GB:ABE77424.1); contains InterPro domain Zinc finger, TAZ-type; (InterPro:IPR000197); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 3.17345061852485 36.397363629693 1.84206060418683e-12 1.99666435808499e-08 22.6401235823680 15.6597822758702 3.17345061852485 0.0587970754577408 AT5G57785_at 5.78309183901304 5.98587828104411 8.21100420101432 8.63304994696253 9.08817959925966 8.8033820017665 4.8938388130743 5.23324595478579 3.71653649238008 5.23199772912976 7.6900274253351 7.76278833701045 8.48846890492238 8.2853281719007 7.43205799952313 7.92700359312568 9.02077060054065 8.16408407813675 4.84203064753006 0.312625949277707 0.30658249858449 0.305667999129311 0.306955462958348 0.311048334229248 0.309891758555229 0.321868901676277 0.317933283363671 0.361000489817476 0.309638510479166 0.305836693778489 0.301805336187630 0.303182605192305 0.302784864244465 0.301805336187630 0.304206431822645 0.308470791682448 0.304581728849336 0.316217845452296 5 5 - 23426354 23426526 23426435.818 23426122 23426648 - gene protein_coding_gene TRUE TRUE AT5G57785.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 3.35467569886833 31.9860277379274 7.14588223385027e-12 4.57170939517845e-08 22.1468475006431 13.4255443771943 3.35467569886833 0.111556764202033 AT5G42180_at 1.21278612454865 0.840716251833278 6.1382949742135 6.42611058075773 4.73657499210234 4.46267417779029 1.05528790631285 1.1299005861138 1.20876613873187 1.56125379901612 1.73120194312101 1.21368949179264 4.29649081210713 3.73473342888427 1.00417437205799 3.26319340246071 8.59577672574673 2.45410933050201 1.37827225266306 0.347465884557932 0.351876647788996 0.364115444658019 0.354072985980592 0.35482859673894 0.352453370286268 0.345511992766652 0.345511992766652 0.351620101504008 0.355303688920618 0.345782171686668 0.348254079713129 0.352466042879166 0.352559732172413 0.345511992766652 0.345511992766652 0.372102134500147 0.345511992766652 0.346498266020685 5 5|0 +|/ 16870382 16871097 16870861.111 16869858 16871452 + gene protein_coding_gene TRUE TRUE AT5G42180.1 peroxidase 64 (PER64) (P64) (PRXR4) Identical to Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) (PER64) [Arabidopsis Thaliana] (GB:Q43872); similar to peroxidase [Arabidopsis thaliana] (TAIR:AT5G51890.1); similar to peroxidase [Striga asiatica] (GB:ABE66389.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 3.14257404443877 31.8873807100998 7.3810052445522e-12 4.57170939517845e-08 22.1340245926701 5.58501082511126 3.14257404443877 0.0950797225610572 AT5G22460_at 3.16297881075178 3.10412583016740 4.42732329350259 4.67910019313942 4.09502715469487 4.33184404633853 3.461932789952 3.59007012838623 3.25013583537813 3.07589102771596 8.39590954360742 8.36998269402253 6.23890119724129 7.45288225277613 9.06709181568305 7.77444965086288 6.01722109718409 8.31884795028983 3.93541971911254 0.260078856732366 0.254230121934947 0.259793991668059 0.253880941651677 0.256753103359555 0.262079801478584 0.256556118107785 0.257240961366084 0.274636931281839 0.257301899834649 0.257734608490454 0.259239363616250 0.262587465244379 0.263696801243613 0.254581029793563 0.256857845691893 0.260888279491860 0.255687336388209 0.258868462706733 5 5|0 -|/ 7443705 7444414 7444020 7443511 7445549 - gene protein_coding_gene TRUE TRUE AT5G22460.1|AT5G22460.2 esterase/lipase/thioesterase family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G74280.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G36290.1); similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74300.1); similar to Os12g0152100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066173.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95828.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 2.66873768162201 30.077593445608 1.36117551051473e-11 5.6687945808339e-08 21.8821136237963 9.41899676550524 2.66873768162201 0.0646021886945903 AT5G51570_at 8.31972082165833 8.33126605139633 8.87043894217112 8.88163656722587 9.13464218537122 8.87089877984937 4.39739258762318 4.47481837414308 3.74535951423889 3.92720875655377 6.60632219216201 6.34710136147425 6.02141758092585 6.83365889798142 6.08774029185188 5.49078868050739 6.91796096867216 5.72990198672026 3.52605087480862 0.279352538859832 0.282718234906771 0.276673493668713 0.284721707357399 0.277725518843523 0.285985933125959 0.277236873143798 0.276638674067916 0.285413030669408 0.289197663591571 0.276443863003735 0.285079195075012 0.280332481311839 0.280065542864199 0.276443863003735 0.277210314558082 0.285643048399074 0.276443863003735 0.290533641611411 5 5|0 +|/ 20967279 20968433 20968007.3 20966630 20968723 + gene protein_coding_gene TRUE TRUE AT5G51570.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to Os06g0136000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056723.1); similar to hypersensitive-induced reaction protein 4 [Hordeum vulgare subsp. vulgare] (GB:AAN17454.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 2.54004655322615 30.0322210934052 1.3828571978235e-11 5.6687945808339e-08 21.8753677565253 12.6537190604651 2.54004655322615 0.0476494681889597 AT5G35735_at 9.96987327525456 10.0459283197204 11.1282192488574 10.9630265379673 10.9279306336640 10.5958401783033 5.68485797023033 6.13535574026724 6.4119972795028 6.03437580836003 9.35959726224227 8.84712810207425 8.70689121391081 9.17294189091477 8.60509513411762 8.05788407291506 7.70796928559468 8.82625864711133 4.23174438010977 0.257228563411439 0.25258540357583 0.255284768297912 0.256184993250206 0.255494175896406 0.261473350198823 0.259279596422597 0.270467684529363 0.289831100618216 0.271909328156344 0.252202505472181 0.252202505472181 0.256272907627474 0.25876124217784 0.261422123555308 0.252202505472181 0.261569941721001 0.268080081648086 0.268801521884524 5 5 - 13918182 13918637 13918428.545 13917982 13920227 - gene protein_coding_gene TRUE TRUE AT5G35735.1 auxin-responsive family protein similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G47530.1); similar to putative membrane protein [Solanum tuberosum] (GB:CAC37356.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 3.02292426755789 29.9083826715947 1.44398077978605e-11 5.6687945808339e-08 21.8568421213974 16.5413005832502 3.02292426755789 0.101838709001291 AT5G63760_at 5.16270796851606 5.14347931339513 7.08073397718436 6.9877392079117 7.10116636058184 7.25140776388167 3.74488103323653 3.35094405539019 2.37137607309513 2.54779864118751 5.6136999720668 4.76015411089605 6.10647181691627 6.06571505522441 4.85048064219337 5.63176529189358 6.34640966411189 4.8676222234398 3.55177263136551 0.238729561471704 0.233282513203926 0.245571726904478 0.239978518528211 0.234884581885 0.236715113633757 0.239505277856214 0.234031175133135 0.250937740975128 0.246788092635929 0.233282513203926 0.235151983129206 0.239792292441577 0.241687313497024 0.242146955622191 0.233282513203926 0.241447199544064 0.238880301434758 0.239057411623604 5 5 - 25533118 25533869 25533558.2 25533104 25535059 - gene protein_coding_gene TRUE TRUE AT5G63760.1|AT5G63760.2 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to Zinc finger, RING-type; Zinc finger, RanBP2-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85988.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 2.73069973331607 29.7773641617173 1.51188101696041e-11 5.6687945808339e-08 21.8370597161169 9.9048519411666 2.73069973331607 0.0747901715113814 AT5G54960_at 9.89666256380962 10.033007818192 11.1758310480982 11.2164376518302 11.486638778104 11.2958953590993 8.16063314567683 8.08121456340308 7.3066789145754 7.64019939068447 9.93099867150212 9.39482090273112 9.5753693763478 9.85658717339092 9.31056239958707 9.97351358551429 10.1917483134485 9.8099587792837 6.17338420041754 0.149552422941730 0.149642069475308 0.158878893558211 0.154505710550093 0.155340684506766 0.156327948946348 0.155446066463334 0.159394703231749 0.175615850263210 0.169094380672421 0.149552422941730 0.149552422941730 0.152267433403102 0.149552422941730 0.152466260820842 0.150483116698333 0.153658652469283 0.158962989288171 0.184339771513676 5 5 - 22328115 22328628 22328427.636 22327913 22329987 - gene protein_coding_gene TRUE TRUE AT5G54960.1 PDC2 (PYRUVATE DECARBOXYLASE-2); pyruvate decarboxylase pyruvate decarboxylase-2 similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G33070.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAG13131.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain Pyruvate decarboxylase/indolepyruvate decarboxylase; (InterPro:IPR012110); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766) 2.48308929242288 29.6627959476297 1.57412313171608e-11 5.6687945808339e-08 21.8196054805086 18.5660563170857 2.48308929242288 0.0434119921890826 AT5G59320_at 9.912217136731 9.94743397927033 13.1110722407403 13.1983238306972 13.6779537409228 13.7557170661492 13.0316864217597 12.9102712849222 9.19573411246882 11.2413216582939 11.6748265577845 8.38382407317743 11.5649607886042 11.8202393732929 13.1234011019407 12.6361819266668 13.8807231143630 14.1829030812639 7.65787804854878 0.117841895520754 0.115313163354335 0.113731383330438 0.111949228185197 0.117354533389022 0.119008252766400 0.112811485936201 0.111287923181893 0.127574651589184 0.110291390230067 0.109223875736701 0.114527848118226 0.110904739290113 0.110642069055974 0.109223875736701 0.109223875736701 0.116530846604648 0.110807320310462 0.131855952422072 5 5 + 23946293 23946588 23946432.727 23946197 23946970 + gene protein_coding_gene TRUE TRUE AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding lipid transfer protein 3 Identical to Nonspecific lipid-transfer protein 3 precursor (LTP 3) (LTP3) [Arabidopsis Thaliana] (GB:Q9LLR7;GB:Q9FIE6); similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 2.38938453816138 29.3433623309154 1.7629579596215e-11 5.6687945808339e-08 21.7701601953783 23.2047646836027 2.38938453816138 0.0297944833639828 AT5G22630_at 5.41451950115192 5.4845045456432 8.93264710957 8.8736907367921 7.4617602271647 7.72908656290659 5.40212771268017 5.64571901790254 5.5139705154249 4.74183839233915 7.55281815096734 7.51383430980604 7.59128515734147 8.0773447940588 7.11520378417963 7.60698109374116 8.5407386849831 7.4915940247024 5.52709910357862 0.204260364266095 0.198647095689231 0.204974543358744 0.207749725002614 0.197725317435069 0.196825615232292 0.205888491746653 0.199724095962751 0.205905521479405 0.208421100343045 0.193365481588467 0.201404150239344 0.194728186384785 0.197646658136128 0.201362799987649 0.199837689782527 0.199044925341510 0.202867626836073 0.200793662635989 5 5 + 7525350 7525884 7525596.091 7524345 7526163 + gene protein_coding_gene TRUE TRUE AT5G22630.1 prephenate dehydratase family protein similar to prephenate dehydratase family protein [Arabidopsis thaliana] (TAIR:AT3G44720.1); similar to prephenate dehydratase [Ipomoea trifida] (GB:AAS79603.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) 2.59391706381108 29.2381835316567 1.83044891591544e-11 5.6687945808339e-08 21.7536240148761 13.3416040952698 2.59391706381108 0.0645597938728606 AT5G24160_at 7.70755603535134 8.14205120434125 9.568911585694 9.5798097715129 10.4036334102802 10.2460109177864 7.60742237690595 7.726283255709 4.63569175184284 5.62715513029529 8.26200352236031 7.54676442194498 8.76468337220823 8.72542902699662 7.70053824927642 7.63010958957712 8.77444713538535 8.71303010732791 4.86298099735749 0.213438456463959 0.210439393778670 0.207429889045735 0.206897727247149 0.208776173173958 0.207889229966524 0.208555954200896 0.213620834582521 0.232061725541192 0.233135736077156 0.207341484690576 0.209643043079766 0.208467151929125 0.206746611678731 0.211229084762551 0.207182630593928 0.208119918854239 0.204488258848249 0.225500628719421 5 5|0 -|/ 8183315 8184020 8183683.556 8183078 8186643 - gene protein_coding_gene TRUE TRUE AT5G24160.1 squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) Identical to Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene epoxidase 1,2) (SE 1,2) (SQP1,2) [Arabidopsis Thaliana] (GB:O65402); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 2.68822312743877 28.5353299845549 2.3609209684166e-11 6.8241934989233e-08 21.6397580384916 15.5259939720142 2.68822312743877 0.0826102826854855 AT5G61380_at 8.64572276461965 8.37842612065829 9.16142787897321 8.85216664725696 9.53369511491726 9.55874040230773 3.89550411419174 3.78993284388393 4.44367044825854 4.1502421772951 5.41516423773872 6.07941976754599 5.97596587275917 6.38453988008643 5.85795732381111 6.10408453523871 6.4233389488778 6.13554797396482 4.04105569200199 0.246234824554589 0.241602186652022 0.245894113279670 0.243834985123397 0.245474782194289 0.246862879932185 0.240913627257521 0.255580087188827 0.245426162033377 0.265209452011461 0.239900539702332 0.238575878144012 0.238575878144012 0.238575878144012 0.240859474526820 0.23919705621116 0.242348909297312 0.240046447428621 0.253257134762243 5 5 + 24694841 24695357 24695054.909 24692313 24695776 + gene protein_coding_gene TRUE TRUE AT5G61380.1 TOC1 (TIMING OF CAB1 1); transcription regulator pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Two-component response regulator-like APRR1 (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) (APRR1) [Arabidopsis Thaliana] (GB:Q9LKL2;GB:Q9M4B7); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to timing of CAB expression 1 protein [Castanea sativa] (GB:AAU20772.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 2.46722863083818 27.0487799354316 4.12921735948912e-11 1.02354655758507e-07 21.3782201692446 12.8562811975285 2.46722863083818 0.07318853179925 AT5G09440_at 7.64326034916878 8.36068901016098 10.7611568770137 10.9824141882550 11.0678153619523 11.1717051403661 6.29263555308362 6.69585530231149 3.86742032095519 5.28927441264743 8.04049624971101 6.06409902228196 8.54867411478178 8.24038427860308 5.27223283558273 7.66502498670789 7.99009235131094 7.8993571615968 4.89892348167961 0.283001028646020 0.281816697852954 0.302976717026858 0.304783847226832 0.304252726057668 0.301359536375567 0.281629627216584 0.278558018405031 0.323811064634257 0.294793697684265 0.278558018405031 0.286549550984244 0.287825321667669 0.282510455551085 0.299366503544367 0.278558018405031 0.293921766260824 0.282165231305650 0.314613563412934 5 5 + 2938649 2939154 2938844 2938348 2939462 + gene protein_coding_gene TRUE TRUE AT5G09440.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G64260.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 3.26375094576342 26.9746127662626 4.24931537536469e-11 1.02354655758507e-07 21.3643813067048 15.1970670712054 3.26375094576342 0.148569009608784 AT5G17650_at 7.68442240836174 7.85036969955783 10.4989207929463 10.4233563874110 9.95981380066942 9.76815220373574 9.09777835474515 8.91829018008503 5.79591356531642 7.32909037067482 8.62266501130531 8.01556466050265 9.5505761978719 9.3082379537367 8.69466910076253 9.68011501076937 10.3175086447784 9.22955312381846 5.87156248143254 0.174543747727051 0.175731412332562 0.176400302958457 0.175230779828688 0.176568918071835 0.180450125348983 0.176546184351903 0.176176581027500 0.241690069034687 0.190135092480175 0.177699240731549 0.182361096883543 0.172373355086099 0.172373355086099 0.172373355086099 0.174897304839482 0.178560281973317 0.177578109466880 0.215494669944684 5 5|0 -|/ 5817104 5817710 5817447.6 5816700 5818349 - gene protein_coding_gene TRUE TRUE AT5G17650.1 glycine/proline-rich protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G45350.2); similar to Unknown (protein for MGC:12025) [Mus musculus] (GB:AAH05782.1) 2.31000902131921 26.7593681176295 4.62002119577029e-11 1.05426917684925e-07 21.323769295739 17.0299129878146 2.31000902131921 0.0553230224770811 AT5G59310_at 3.27246855739377 3.28281730896273 7.27435657177273 7.832951643397 11.1071467952284 11.1500115522863 7.2390106194164 7.15448767030933 1.91276308237684 8.08430296932905 4.00995697560340 2.30668680106403 3.65972460433983 3.93867640657133 6.02884583489397 6.19688066641352 7.91532831422464 8.30620876722767 2.44768260485377 0.396754674969860 0.392887778964479 0.39589049567445 0.392887778964479 0.407352073709049 0.40882975130281 0.392887778964479 0.395234645730447 0.41415881331818 0.396695353482993 0.40001674535796 0.402568931660751 0.395273753755638 0.405638781226554 0.392887778964479 0.392887778964479 0.402569627076321 0.392887778964479 0.412563555564644 5 5 - 23942735 23942958 23942846.182 23942311 23943078 - gene protein_coding_gene TRUE TRUE AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Identical to Nonspecific lipid-transfer protein 4 precursor (LTP 4) (LTP4) [Arabidopsis Thaliana] (GB:Q9LLR6;GB:Q9FIE7); similar to LTP3 (LIPID TRANSFER PROTEIN 3), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59320.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 2.62547979787815 26.3464547628045 5.43413932845084e-11 1.17804509681433e-07 21.2439475805432 12.0109253890853 2.62547979787815 0.0980652189286259 AT5G17760_at 5.60530953634399 5.55062857958923 7.99574204941981 8.29173413268386 5.70595868371024 6.06582543515686 2.19466249748676 2.20054494186330 1.70603041569879 1.67569052113703 3.24444044949381 3.39118290208577 3.45584702644867 3.06523572275323 2.57869344738071 3.04979732908188 3.47369105545384 4.03270798281149 1.36525493833867 0.288756702271889 0.291849604723919 0.284969814816765 0.283774698215710 0.288092721098906 0.294400128355713 0.283774698215710 0.283774698215710 0.284672044775354 0.302880591518676 0.283774698215710 0.283774698215710 0.288229310819128 0.286927058433775 0.283774698215710 0.283774698215710 0.283774698215710 0.288513577653701 0.295312839215215 5 5 - 5861298 5861752 5861510.182 5860423 5862424 - gene protein_coding_gene TRUE TRUE AT5G17760.1|AT5G17760.2 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959)|similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 2.41557644206786 25.7686938351399 6.8482940931524e-11 1.36609765039214e-07 21.1278686474650 7.8856881226135 2.41557644206786 0.0811956553328696 AT5G13320_at 6.62071009585105 7.1747137218336 10.338313859626 10.4747974598435 7.80290591520339 7.28942175916854 2.83104345330801 3.0486337340592 3.38870005764116 3.67800632480888 5.24718891161337 5.14048890789158 5.90689869534318 5.25353499518171 4.38843188848383 7.0045579382528 5.34507440862733 5.31954096147769 3.51351648590193 0.239067303797603 0.241367932633696 0.237963633482136 0.237963633482136 0.237963633482136 0.252685273806902 0.237963633482136 0.248881142957817 0.243790842506091 0.242316988609531 0.237963633482136 0.237963633482136 0.237963633482136 0.245287621510521 0.238464688253064 0.239081550998482 0.241720982682438 0.237963633482136 0.239029439334757 5 5|0 +|/ 4270208 4270799 4270536.8 4267513 4271054 + gene protein_coding_gene TRUE TRUE AT5G13320.1 PBS3 (AVRPPHB SUSCEPTIBLE 3) signaling gene in disease-resistance involved in restricting the spread of both virulent and avirulent pathogens similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48660.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G51470.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 2.99077906471951 25.7387768530616 6.9317562523137e-11 1.36609765039214e-07 21.1217139067666 11.4362952720998 2.99077906471951 0.138071086238243 AT5G27420_at 7.35914515630858 7.54874031840167 9.4899923440599 9.5614803939793 8.19704432076656 8.40771216140252 2.36758184393533 2.49190943110547 3.84051350500446 2.75330217673605 2.77019695754335 4.44625641404465 3.02689176096423 3.51327349762894 3.44097354062889 3.02044573626021 3.72380784138509 3.93540452771984 2.52345669922490 0.306628231945181 0.313066902261858 0.301226645559065 0.301435023797153 0.306387098489277 0.305509347743301 0.298325444392341 0.297476528294918 0.297507854438442 0.290731960283122 0.285367968534180 0.293793799476645 0.291647258565252 0.302770021894051 0.288874555262871 0.285179844829985 0.286916254316823 0.292814960178719 0.29437704461776 5 5 + 9684633 9685196 9684848.455 9684075 9685564 + gene protein_coding_gene TRUE TRUE AT5G27420.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5H precursor (ATL5H) [Arabidopsis Thaliana] (GB:Q8LGA5); similar to ATL6 (Arabidopsis T?xicos en Levadura 6), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G05200.1); similar to RING/C3HC4/PHD zinc finger-like protein [Cucumis melo] (GB:AAO45753.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 2.20888930424054 25.6133617705697 7.29394108360246e-11 1.37497739202446e-07 21.0957545346322 10.1898242853334 2.20888930424054 0.0549690793758309 AT5G53710_at 2.43929511253510 2.79659903003748 5.8156780386138 6.00752522599812 8.10604656910958 7.91586616787573 4.62797617922568 4.93316237214644 3.8165917508116 3.61248642223553 5.67159059464662 3.65453648499011 4.47918300119968 6.17439045975652 4.5866831164117 3.66111977696766 5.52940038535202 5.92405305816299 2.32099081558154 0.251797658070169 0.251965784543517 0.255154085728676 0.252160433504404 0.249378271751852 0.248252088453178 0.249287831792591 0.253114388430654 0.246805184948295 0.246805184948295 0.248658997527701 0.254712597872648 0.246805184948295 0.24840817338539 0.246805184948295 0.247130946636746 0.264603622901055 0.25681845308508 0.255228168146838 5 5 - 21822640 21822935 21822782.455 21822485 21823020 - gene protein_coding_gene TRUE TRUE AT5G53710.1 unknown protein 2.48605872019475 25.3454850910271 8.13880874418909e-11 1.47031620456796e-07 21.0394407361767 9.43533988989047 2.48605872019475 0.0937979633769479 AT5G26570_at 9.95845837380043 10.0323581298725 10.3115654017271 10.3452410931300 11.0035239588910 10.6189236050087 8.52750103972108 8.55978129577128 5.34902521703883 7.40445014538367 9.65086120051 9.58183001752777 9.64914340987083 9.654707341547 10.0170831996566 9.34307391758564 9.75181142758938 9.87102074312328 6.65301531053544 0.113592254337421 0.116043309436999 0.124109617137058 0.119075723483597 0.117054894806481 0.125077699453892 0.122601826013268 0.120399919463501 0.172137934996789 0.138260366381718 0.117975100555407 0.113592254337421 0.11801087993289 0.117021700911096 0.117500057733993 0.113592254337421 0.124548671684754 0.116921546954993 0.133782916859209 5 5 + 9266983 9267504 9267175.909 9261583 9267732 + gene protein_coding_gene TRUE TRUE AT5G26570.1 PWD (PHOSPHOGLUCAN WATER DIKINASE); catalytic chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position. Identical to Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) (GWD3) [Arabidopsis Thaliana] (GB:Q6ZY51;GB:O81504;GB:O81505;GB:Q5XMK9;GB:Q84TI8); similar to SEX1 (STARCH EXCESS 1) [Arabidopsis thaliana] (TAIR:AT1G10760.1); similar to Os12g0297500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066613.1); similar to chloroplast alpha-glucan water dikinase isoform 3, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21981.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) 2.26069999387745 25.1872035956785 8.68791538604061e-11 1.50673444362799e-07 21.0056014478414 17.9990549279881 2.26069999387745 0.0682534863020183 AT5G56870_at 9.41954446546259 9.62695606764894 10.39169661833 10.1242320692697 11.2155550265478 11.0934615312203 6.56979439169407 6.43435811437699 7.83147532725276 6.67902276519253 8.13541486298182 8.78667013772668 8.78040421671882 9.00359283257916 8.06160487330471 9.28548806586169 9.75750342776879 8.5522297867954 6.88981535773429 0.200166347945583 0.203486609483932 0.204308921088049 0.205305005142728 0.209592685239974 0.204595415748283 0.210493352354638 0.208331771877327 0.220518108018382 0.232565636491056 0.218884216202466 0.200166347945583 0.200166347945583 0.210350636060396 0.206682837770191 0.200166347945583 0.202577928776437 0.205374205432408 0.227660005824925 5 5|0 +|/ 23024811 23025595 23025284.556 23021422 23025875 + gene protein_coding_gene TRUE TRUE AT5G56870.1 beta-galactosidase, putative / lactase, putative similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT3G52840.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to pear beta-galactosidase1 [Pyrus communis] (GB:BAE72073.1); similar to beta-galactosidase [Pyrus communis] (GB:CAH18936.1); similar to beta-galactosidase precursor [Carica papaya] (GB:AAC77377.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 2.17774938014345 24.3962066174221 1.21131144513225e-10 2.01393016084289e-07 20.8299481480462 17.3238504566656 2.17774938014345 0.066531959781992 AT5G57220_at 4.38005740370082 5.16984743993366 8.5043623921378 8.61057275536894 9.05939123202631 8.54797272979125 1.99891150972582 1.65529561979154 3.78271914437781 2.69631792557470 3.59057115555419 7.72698061372539 2.50138110418810 4.77316137581336 4.73985817259147 2.50584527427419 3.61020980177412 3.39707593859581 2.52192771198513 0.275243831072700 0.273189748277187 0.285506980375604 0.281677245401644 0.279787249881148 0.278314478394705 0.280847297292816 0.276236468793538 0.269514023679598 0.28187552966426 0.269514023679598 0.280256299319303 0.280135275170299 0.271513902198221 0.283834165182410 0.274245288547784 0.286849656566895 0.277867251124897 0.275572342681567 5 5 + 23206310 23206876 23206609 23205066 23207083 + gene protein_coding_gene TRUE TRUE AT5G57220.1 CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2); oxygen binding member of CYP81F similar to CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37430.1); similar to CYP81F3 (cytochrome P450, family 81, subfamily F, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37400.1); similar to CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37410.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 3.24243030981424 24.3149084286713 1.25414291132562e-10 2.01393016084289e-07 20.8112552390944 9.54377989708141 3.24243030981424 0.174319373061222 AT5G11970_at 6.58373443228228 6.44924918611908 7.924425267513 7.98916281081492 7.86719204193484 7.7228432840694 4.82573489475536 5.41910457817002 5.50356221892819 4.41046824897427 8.48375781031667 8.02640648562535 7.85008182307277 8.2611263989031 8.04156375713077 8.1880639831451 7.8796453204652 6.93331063190799 5.08437856601799 0.2081861763746 0.202616379676127 0.207461753400402 0.205852760702387 0.201726821911318 0.211890694379409 0.206759068602727 0.211129886838452 0.209614489761123 0.226861362144190 0.206854638404312 0.200858847426008 0.197688507330340 0.199068166128867 0.211849234280076 0.198004211812461 0.201128413394914 0.212019284815830 0.202186437436175 5 5 - 3863297 3863583 3863453.091 3863072 3863756 - gene protein_coding_gene TRUE TRUE AT5G11970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19460.1); similar to hypothetical protein MtrDRAFT_AC152551g19v1 [Medicago truncatula] (GB:ABE86249.1) 2.50748746329937 24.1626852272788 1.33886149394786e-10 2.03507833567229e-07 20.7759230722415 13.3264129141045 2.50748746329937 0.108790890593999 AT5G53760_at 3.78199438770027 3.74545791445982 5.2619491959148 5.23424459061084 5.62418181330576 5.56948298285336 5.28046067473579 5.31994790323723 2.64182684782528 4.35843946869197 6.8263717162528 6.22966863071954 6.76641024886302 7.15917263766528 5.7284535567932 6.55204522269118 6.66654112728436 6.52143716606508 3.81474070305773 0.257373631227376 0.257650441976531 0.260877077775836 0.257565592776506 0.249937414130586 0.257886134277086 0.266291430285449 0.254871332707627 0.27446109225427 0.254463836712359 0.264514062918366 0.249053209894101 0.251211757402993 0.263165114260732 0.250648816495699 0.249053209894101 0.264339267726494 0.25709265878733 0.264808114178986 5 5|0 +|/ 21842806 21843481 21843120.4 21839712 21843677 + gene protein_coding_gene TRUE TRUE AT5G53760.1|AT5G53760.2 MLO11 (MILDEW RESISTANCE LOCUS O 11); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Identical to MLO-like protein 11 (AtMlo11) (MLO11) [Arabidopsis Thaliana] (GB:Q9FI00); similar to MLO14 (MILDEW RESISTANCE LOCUS O 14), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G26700.1); similar to OSJNBb0017I01.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE05742.1); similar to H0901F07.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86271.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 1.92087981203570 24.0668468900949 1.39539689277188e-10 2.03507833567229e-07 20.7534541530981 10.0578473719273 1.92087981203570 0.0141160661684873 AT5G37740_at 7.5617267744122 7.67321612307873 9.02603574055749 9.19819142088354 9.05728207994768 8.72329350580814 3.0616988758562 3.23016254448083 5.16014694194704 3.6967374180303 5.34800825845649 4.9037966162493 4.49554924077051 5.9416405698161 5.73116636609192 5.52982312669902 5.1893890117493 5.26400940342757 4.73588547195782 0.236735223094504 0.231460217668322 0.239019492489488 0.233858384461018 0.235557454947855 0.243846354135517 0.227919654845587 0.227519319926312 0.246302418895496 0.238213877263609 0.228140952686259 0.228823173457498 0.233318012319092 0.236853546089876 0.237796721745483 0.227133970806493 0.228070681087837 0.227133970806493 0.233048559084742 5 5 + 15009383 15010631 15010151.182 15009235 15010901 + gene protein_coding_gene TRUE TRUE AT5G37740.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G66360.1); similar to C2 [Medicago truncatula] (GB:ABE81436.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 2.19449957709401 24.0076648180874 1.43160854514890e-10 2.03507833567229e-07 20.7394917788743 12.1071239338627 2.19449957709401 0.0738267966507262 AT5G36910_at 3.44175602536199 3.87322811167426 6.12455576132149 6.49031844182265 5.29044825193707 5.80958553471287 6.78677738025668 6.80158851194498 4.76927871610611 6.40021540010964 10.9651250580186 10.8845535736828 11.1766010076890 11.1125545432611 10.2502998737494 10.9237901349442 10.4374910654165 11.054603912252 7.15998931049779 0.295294688552079 0.291284114377128 0.273958642599469 0.271116289549594 0.268253066452824 0.284321953855134 0.273461360243891 0.269942210909348 0.269331546459104 0.274116267118777 0.270900536477243 0.271682956070595 0.26889497116582 0.272674130678009 0.268253066452824 0.270640729950675 0.271064141738393 0.271115476290573 0.268732121242192 5 5|0 -|/ 14579288 14579841 14579581.8 14579047 14579980 - gene protein_coding_gene TRUE TRUE AT5G36910.1 THI2.2 (THIONIN 2.2); toxin receptor binding Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Identical to Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic protein] (THI2.2) [Arabidopsis Thaliana] (GB:Q42597;GB:Q8LEF0;GB:Q9FIW2); similar to thionin, putative [Arabidopsis thaliana] (TAIR:AT1G66100.1); similar to thionin (GB:AAC41679.1); contains InterPro domain Thionin; (InterPro:IPR001010) 2.72184453868060 23.898812526171 1.50092324702582e-10 2.03507833567229e-07 20.7136353613921 14.0575098548946 2.72184453868060 0.132889011868943 AT5G27600_at 5.89711059021306 5.64046163427241 7.7704042719195 7.701505824663 6.88853558940574 6.92743759095669 4.71475861928559 4.42404218386081 3.9274687257023 4.64753175575358 6.14783279070402 5.88397036628675 6.58259942123805 6.14356400918523 5.56866344924412 7.21538439050507 7.12029451571946 6.49636151183363 4.18880820490491 0.221393353481108 0.21967028315056 0.216155210198159 0.212236564818085 0.216586184260167 0.211948222259095 0.22750904792929 0.225357648597434 0.230576004624768 0.224450457142166 0.210700222117219 0.213680656934762 0.220285993024073 0.214619299306262 0.217458421583353 0.210699250729876 0.215500162002323 0.215993756328748 0.221592020676520 5 5|0 +|/ 9745823 9746755 9746316.556 9742579 9747008 + gene protein_coding_gene TRUE TRUE AT5G27600.1 LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. similar to LACS6 (LONG-CHAIN ACYL-COA SYNTHETASE 6) [Arabidopsis thaliana] (TAIR:AT3G05970.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96460.2); similar to AMP-binding protein [Brassica napus] (GB:CAA96522.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96461.2); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 2.14655423685710 23.8971650276048 1.50200011870656e-10 2.03507833567229e-07 20.7132422610558 11.5702503892187 2.14655423685710 0.0684922931902672 AT5G22300_at 9.34957048533333 9.36297418046011 10.5668201306574 10.5744068505230 10.3963967966022 10.2554986298876 8.92806366610811 9.00066127526023 5.71230925704669 6.80549043968026 7.95969817152237 8.08791903551063 9.89897037735933 9.35374401276612 7.860695922595 10.7121338912690 10.3583916056343 9.199592459684 7.3586369424425 0.206997645942175 0.204522413565861 0.210557871901223 0.209629807353784 0.207192390831778 0.20884716362883 0.200174731999229 0.200174731999229 0.232541754720638 0.221526333844589 0.217287827586417 0.213220996697475 0.20148712869178 0.207536094667069 0.242878889145961 0.201277151489099 0.206513836705849 0.212235973595940 0.233563813767588 5 5 + 7380988 7381718 7381362.909 7379202 7381928 + gene protein_coding_gene TRUE TRUE AT5G22300.1 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. Identical to Nitrilase 4 (EC 3.5.5.1) (NIT4) [Arabidopsis Thaliana] (GB:P46011); similar to NIT3 (NITRILASE 3) [Arabidopsis thaliana] (TAIR:AT3G44320.1); similar to NIT2 (NITRILASE 2) [Arabidopsis thaliana] (TAIR:AT3G44300.1); similar to Nitrilase 4 (GB:Q42965); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Nitrilase/cyanide hydratase; (InterPro:IPR000132) 1.92068875247327 23.6741431207909 1.65587713852727e-10 2.17558127737602e-07 20.6595387231634 17.7064850339869 1.92068875247327 0.0275586080677275 AT5G65640_at 3.19745861721341 3.28045899004436 3.80463341798595 4.37716125047504 5.74311087201052 5.40971064057552 4.30629180926674 4.40190636546012 2.85288764025046 3.35879969445065 6.35665587546851 7.34183832310745 6.75609279842725 6.51201858657002 7.6967732849328 7.46120244365963 7.02527854741182 7.58513113043024 3.22326987153951 0.30965320969564 0.294015113368413 0.292618021920075 0.289417177051080 0.288617913032738 0.304240075321654 0.288617913032738 0.295234050301217 0.306234470662496 0.29301198061347 0.291673041861889 0.294053362061503 0.29420265756977 0.291606160639186 0.30139107754284 0.291427659312723 0.3027310050365 0.297193968915712 0.288617913032738 5 5|0 +|/ 26254881 26255910 26255494.7 26254285 26256310 + gene protein_coding_gene TRUE TRUE AT5G65640.1|AT5G65640.2 BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor|BHLH093 (BETA HLH PROTEIN 93) similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to Os03g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048889.1); similar to Putative bHLH transcription protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05491.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 2.49200661905151 23.2928108482053 1.9604452681152e-10 2.49998237838203e-07 20.5654162639243 9.4335212999612 2.49200661905151 0.116728550662038 AT5G17450_at 5.834757463342 5.39910185346895 8.90138196703642 8.85787082432143 8.72833741233258 8.14031251665047 6.03347750459152 5.48727871252031 4.47935985192506 5.38994027586083 8.5268714378027 7.75779954513825 7.52061226589141 7.74386702719871 7.05723994506703 7.88270539155247 8.30693628781725 8.47525827553797 5.29882454176393 0.233191275022244 0.226090104246531 0.209892020389060 0.214126154268245 0.217585724245486 0.208688432026193 0.219060623296749 0.218753214016869 0.239362149248934 0.224756873441801 0.211413390739106 0.211837310530235 0.210054723711318 0.216615255566201 0.211499472960328 0.208688432026193 0.214156155896384 0.208688432026193 0.215428778729608 5 5|0 +|/ 5755400 5756702 5756473.778 5755324 5756890 + gene protein_coding_gene TRUE TRUE AT5G17450.1|AT5G17450.2 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84676.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to farnesylated protein 3 [Hordeum vulgare subsp. vulgare] (GB:CAD70173.1); similar to Os01g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043154.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 2.91059575604432 23.1866637053466 2.05575798542958e-10 2.54662550284415e-07 20.5386880817809 13.6552911960416 2.91059575604432 0.158209771628662 AT5G47220_at 8.36913095180406 8.74640653784102 10.5947908158364 10.7258372454160 9.69550212761319 8.88289975178616 4.40671400025203 4.80794916073169 4.79952778106345 3.45300144244685 6.63604466554067 6.60958823218586 6.61001137027965 7.84139165947499 5.78426139143056 8.34704048079499 6.84142896894716 5.77629698211162 4.05504597053266 0.242218681986054 0.242218681986054 0.242218681986054 0.242218681986054 0.244264466715452 0.2557442270705 0.248421498109959 0.244263851450137 0.253285768266409 0.247401046294071 0.250113593801295 0.244195367761328 0.242218681986054 0.242218681986054 0.243692147744547 0.242218681986054 0.248359761111492 0.242328146047442 0.254861858171892 5 5 - 19189306 19189790 19189612.636 19189089 19190050 - gene protein_coding_gene TRUE TRUE AT5G47220.1 ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2); DNA binding / transcription factor/ transcriptional activator Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. Identical to Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) (ERF2) [Arabidopsis Thaliana] (GB:O80338;GB:Q8LBU9); similar to ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G17500.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD65036.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 3.04772011333522 23.1050873682047 2.13244948370808e-10 2.56825057152429e-07 20.5179875125455 13.7327953406734 3.04772011333522 0.171387236387661 AT5G20230_at 10.7283623967267 10.8065776264062 12.0766328380819 12.1030727581593 11.4467012668742 11.2815054482789 5.03743928508946 4.22324711747397 8.14039950239077 5.573954802423 8.50142326985686 8.95206131058106 5.34698578597075 8.48164634923527 9.04007157279254 5.63299568818702 6.32903822393651 7.57362005819908 4.46718563286952 0.258035975242844 0.256204477668362 0.257474242527532 0.257713790547683 0.258252369910014 0.258192441834489 0.260753692258913 0.266320381758915 0.263544381214553 0.270003329114724 0.257345303796598 0.253572478899284 0.266125131099556 0.258722500905450 0.253572478899284 0.266055614534911 0.262048570020659 0.258884344308357 0.272796079395428 5 5 + 6826720 6827343 6827061.364 6826508 6827601 + gene protein_coding_gene TRUE TRUE AT5G20230.1 ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding Al-stress-induced gene Identical to Blue copper protein precursor (Blue copper-binding protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) (BCB) [Arabidopsis Thaliana] (GB:Q07488;GB:O82664); similar to UCC3 (UCLACYANIN 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT3G60280.1); similar to Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form (GB:1X9R); similar to Umecyanin (UMC) (GB:P42849); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 2.72489422060413 22.8778499984628 2.36306394450016e-10 2.76907610562783e-07 20.4595837023728 16.4843141395893 2.72489422060413 0.144478905718428 AT5G64560_at 6.78575291982846 7.05435717430192 8.61174412992886 8.25789241062967 8.81478793254057 8.58822585236612 5.8968002589553 5.35247964175354 4.26256873245323 4.45754086627615 7.42598837992958 7.60406545882653 6.79921033601207 7.18292723869463 6.91258754373994 7.21467749370281 7.67883767123786 6.7029752723548 4.47357837534969 0.251715578446788 0.24488087210309 0.244760372529036 0.250539306253846 0.24661571829031 0.248783295188312 0.247909964200106 0.258382111100833 0.252264802409336 0.259907931926974 0.248739417771453 0.244299774946335 0.25050295790831 0.257610710943618 0.254957575007061 0.245353117149243 0.256122307308865 0.252983768453283 0.265430638048799 5 5|0 -|/ 25824479 25825343 25824969 25823995 25826867 - gene protein_coding_gene TRUE TRUE AT5G64560.1|AT5G64560.2 magnesium transporter CorA-like family protein (MRS2-2) similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 2.54403888280454 22.786538891105 2.46329359297403e-10 2.81056557811935e-07 20.4358039969545 13.2142823728740 2.54403888280454 0.127753096886849 AT5G56910_at 6.58146298855183 6.6234759784986 8.49002936274602 8.3933684763424 8.860581550109 8.92526074610803 5.30580589359521 6.03583565739585 4.91149608305329 5.13394904592959 7.29846859325825 7.53072384395398 8.12431946755672 7.79182424801472 7.74082802877869 8.11161210272157 8.22749287364969 7.28402917020439 5.63739475030215 0.198010685642617 0.188085865557805 0.191700977819022 0.190012544745311 0.188085865557805 0.194394878709032 0.194305101976519 0.210721272041970 0.216714827883346 0.201342517482982 0.197320564361625 0.198589522201736 0.19666268175484 0.196883903608064 0.194421800442299 0.188085865557805 0.197160932128414 0.199970001182721 0.201421721837063 5 5 + 23040551 23041210 23040852.182 23040148 23041431 + gene protein_coding_gene TRUE TRUE AT5G56910.1 cysteine protease inhibitor similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56920.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 2.53335695111912 22.6573366773780 2.61313902430542e-10 2.84913291578209e-07 20.4018469878998 13.8976153737245 2.53335695111912 0.128134711382128 AT5G18525_at 5.54328391239372 5.79115464783283 7.02297823040637 6.9637077801492 7.5307956237398 7.41563721398941 3.33978277797626 3.62630549660024 4.12769599608801 4.02899897928445 5.36634519440437 5.4905793361849 5.29283187154615 5.86535247574224 5.15912378991008 5.61509136139221 5.52026582298898 5.48489777289426 4.00512264591143 0.24206681217965 0.244309670203631 0.251933306285148 0.252772345300613 0.244017105140372 0.254874382650186 0.248596141600170 0.241952464080449 0.25661244177123 0.244170346883336 0.245231936544003 0.244428198433901 0.242782178190555 0.242839659330256 0.240996347167115 0.239891083178681 0.251392559547377 0.244418279480885 0.240943329521187 5 5 - 6147057 6147779 6147474.909 6146746 6149757 - gene protein_coding_gene TRUE TRUE AT5G18525.1 WD-40 repeat family protein similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52616.1); similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52617.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 2.03925987470435 22.644533611385 2.62852165362824e-10 2.84913291578209e-07 20.3984621697165 10.6683307904997 2.03925987470435 0.0692888086375213 AT5G04340_at 5.78600343415066 6.04382885431586 7.93320040592491 7.95360251490368 7.8262870512387 7.96340267657105 3.68298304577242 4.24385284119072 3.14710041231247 3.08876074060948 4.11769963386092 4.11382911030438 4.684181091242 5.30357401248272 2.95928532657032 5.90925258226042 5.07390275967586 4.09772087603873 2.25694954725276 0.228286364301749 0.226165501963103 0.233803815456821 0.243119377322799 0.232506863976603 0.235588766811902 0.229175015824551 0.23006766809835 0.231797426224982 0.238557326002854 0.228919458564688 0.228468216484441 0.226090034421120 0.236766940516133 0.235955471450508 0.231350402817207 0.256995977609079 0.232203297283417 0.239326831304572 5 5 - 1216358 1216862 1216649.091 1216132 1217107 - gene protein_coding_gene TRUE TRUE AT5G04340.1 C2H2; nucleic acid binding / transcription factor/ zinc ion binding putative c2h2 zinc finger transcription factor mRNA, similar to STZ (SALT TOLERANCE ZINC FINGER), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G27730.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52060.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 2.34072494614918 22.495919677717 2.81450482008578e-10 2.91226240289111e-07 20.3589069816469 10.1108288900648 2.34072494614918 0.109485740102634 AT5G60460_at 6.35649153647527 6.67083806855082 7.78595531796631 7.82959406133162 7.7154529140984 7.4331675714973 4.65445929293391 5.07851223588041 5.15685596798604 4.90443488960463 7.67551817211876 8.22960128905799 7.69385978369423 8.0737130046017 7.4171133918126 7.72528024193267 7.41356831251746 6.48595374952341 4.99549414171259 0.25713910088859 0.255072146493498 0.256678765835267 0.253776090054481 0.251712026804879 0.251543814608937 0.276509291553768 0.258923057379000 0.273316036321308 0.259678583475904 0.252972130260957 0.254933345592872 0.25772761022364 0.262271786075632 0.251543814608937 0.252091237456288 0.254224690615035 0.264003753856911 0.256366363774973 5 5 - 24334817 24334982 24334901.818 24334663 24335161 - gene protein_coding_gene TRUE TRUE AT5G60460.1 sec61beta family protein similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.2); similar to Sec61beta [Medicago truncatula] (GB:ABD33060.1); contains InterPro domain Sec61beta; (InterPro:IPR005609) 2.28568242140978 22.4417927825775 2.88577530196664e-10 2.91226240289111e-07 20.3443782753074 12.9946860379710 2.28568242140978 0.103865096111087 AT5G41900_at 2.41043764041415 1.97120357811425 4.79352268445055 4.67865301324945 6.36811406053846 6.05398548004156 5.13899208690724 5.29119135203348 4.93897025131611 4.75715797209522 8.26568478871884 7.50282407370665 7.59616487800371 8.2840378866835 7.65687857218516 6.55447070361318 6.12241815565019 7.10895712515114 4.30562584426478 0.226597855173991 0.229754065600736 0.220770334110901 0.221982457218311 0.208632034108011 0.224100241785276 0.211113404786537 0.211192658901386 0.212099600951242 0.216722890377500 0.219338112125733 0.214207375241982 0.215482364256649 0.230116337895999 0.213271893417025 0.208632034108011 0.215090260680613 0.213857707822114 0.209685675567758 5 5|0 +|/ 16787455 16788630 16787998.6 16786181 16788924 + gene protein_coding_gene TRUE TRUE AT5G41900.1 hydrolase, alpha/beta fold family protein similar to BDG1 (BODYGUARD1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G64670.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO33147.1); similar to Os10g0532200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065147.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 2.24489540613737 22.4399245725698 2.88827018230433e-10 2.91226240289111e-07 20.3438756379882 10.6151029263967 2.24489540613737 0.099105035803736 AT5G05410_at 6.16350518117746 6.71865186864111 7.31891323619107 7.41952269486307 8.51784329550496 8.27121299651266 2.93283488908925 2.98117425062494 2.81346135941823 2.26275908292403 3.32054752852747 3.31737672221561 4.02581713112705 3.75498161249853 3.55966283151767 3.56136154098953 5.0279002715413 4.11729639619684 2.19447425837676 0.250988390320934 0.246012161021285 0.258227668202564 0.244060881600492 0.246930526453483 0.245363409953745 0.243343318969857 0.246642744490924 0.249544022636938 0.247519000308383 0.235383654204249 0.241048992711932 0.238143419213615 0.235383654204249 0.235383654204249 0.235383654204249 0.24564807784018 0.240591899538105 0.241528186109047 5 5 + 1603112 1603611 1603432.909 1602206 1603927 + gene protein_coding_gene TRUE TRUE AT5G05410.1|AT5G05410.2 DREB2A (DRE-BINDING PROTEIN 2A); DNA binding / transcription factor/ transcriptional activator Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. Identical to Dehydration-responsive element-binding protein 2A (DREB2A protein) (DREB2A) [Arabidopsis Thaliana] (GB:O82132); similar to DREB2B (DRE-binding protein 2B), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT3G11020.1); similar to DREB2A-like protein [Arachis hypogaea] (GB:ABC60025.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 2.29744230623591 22.3001484672523 3.08178991872007e-10 3.0367671725044e-07 20.3060456132866 9.42004875385878 2.29744230623591 0.106884661105184 AT5G47330_at 4.91861219781069 5.54351261576992 8.62945352669034 8.71809648503494 10.3755595868005 10.0067801555004 8.32688102372046 8.25400671214984 8.12450280069442 7.63390877207531 10.4863232007702 8.82320778655228 8.93975431359627 10.1996298387678 9.36488980083679 8.78817452742099 8.91602131369561 9.89965447307969 5.6871678913317 0.195392528375190 0.191734635875177 0.169928714820161 0.160719231919117 0.154926442086707 0.163765694856744 0.164010923706458 0.155173368210786 0.174782698748063 0.171676636156064 0.156971138021725 0.159207626463435 0.155011574155938 0.161500041569582 0.159999258701954 0.157316616610738 0.161154339508909 0.155702039128079 0.185357994998056 5 0|5 /|+ 19225206 19225911 19225647.125 19224326 19226049 + gene protein_coding_gene TRUE TRUE AT5G47330.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47340.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) 2.47519985997499 22.2235903215795 3.19375594584269e-10 3.07716195703979e-07 20.2851368992205 16.3844794853715 2.47519985997499 0.127129475581509 AT5G20960_at 5.77497268590445 6.03497600845176 7.15396706754655 7.229278511774 7.50717254366206 7.08858887756936 2.38174000388624 2.63774332087171 2.87678045163857 2.91921481034107 4.42398596448085 4.38867363981729 3.80228461830634 4.71602497667756 4.54919620720895 3.87138320312147 4.65476929559401 4.37134379076812 3.23369989713544 0.249396435793609 0.245306089761075 0.247474592062812 0.247753322881034 0.247156654836615 0.250198704172761 0.246709730590124 0.247408048232401 0.262679060875274 0.245931601081088 0.240566433758968 0.240566433758968 0.249257541782311 0.245847424940821 0.244546903004257 0.244229232567205 0.252248258882802 0.246829412083071 0.240566433758968 5 5|0 +|/ 7121496 7122229 7121870.333 7116740 7122776 + gene protein_coding_gene TRUE TRUE AT5G20960.1|AT5G20960.2 AAO1 (ALDEHYDE OXIDASE 1) Encodes aldehyde oxidase AA01. Identical to Aldehyde oxidase 1 (EC 1.2.3.1) (AO-1) (AtAO-1) (AtAO1) (AAO1) [Arabidopsis Thaliana] (GB:Q7G193;GB:O49155;GB:O64417); similar to AAO3 (ABSCISIC ALDEHYDE OXIDASE 3) [Arabidopsis thaliana] (TAIR:AT2G27150.2); similar to AAO4 (ALDEHYDE OXIDASE 4), aldehyde oxidase [Arabidopsis thaliana] (TAIR:AT1G04580.1); similar to AAO2 (ALDEHYDE OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT3G43600.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93768.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93767.1); similar to aldehyde oxidase [Lycopersicon esculentum] (GB:AAG22607.1); contains InterPro domain CO dehydrogenase flavoprotein, C-terminal; (InterPro:IPR005107); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; (InterPro:IPR000674); contains InterPro domain [2Fe-2S]-binding; (InterPro:IPR002888); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; (InterPro:IPR008274); contains InterPro domain Molybdopterin dehydrogenase, FAD-binding; (InterPro:IPR002346); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 2.18735153549229 22.0391749121818 3.48214754060680e-10 3.13431939006827e-07 20.2342161776118 9.40460792664252 2.18735153549229 0.096976029841893 AT5G44210_at 3.94214879290379 4.61494965672607 5.09343993167199 5.7820523634843 6.45303109490365 6.61183310397831 2.60689658984227 2.63196218465802 4.05296136014618 3.08770904441914 6.97033885178084 6.15895617957165 7.16333074856903 7.0856788723128 6.1636672666504 6.26706628584445 6.58180396798146 6.80723330858482 3.17494307139309 0.263144784097052 0.255077008429189 0.257336559569127 0.252762217031470 0.251023929519311 0.264963746851314 0.270643357708188 0.265468123511613 0.255066444220669 0.266659801088609 0.253820112705456 0.252380893704409 0.25017342571413 0.259891258359453 0.251195865822447 0.255519942080342 0.263068157402521 0.259353513849703 0.256475834058922 5 5 + 17824084 17824530 17824305 17823699 17824761 + gene protein_coding_gene TRUE TRUE AT5G44210.1 ATERF-9/ATERF9/ERF9 (ERF domain protein 9); DNA binding / transcription factor/ transcriptional repressor encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Identical to Ethylene-responsive transcription factor 9 (Ethylene-responsive element-binding factor 9) (EREBP-9) (AtERF9) (ERF9) [Arabidopsis Thaliana] (GB:Q9FE67); similar to ATERF10/ERF10 (ERF domain protein 10), DNA binding / transcription factor/ transcriptional repressor [Arabidopsis thaliana] (TAIR:AT1G03800.1); similar to ethylene-responsive element binding protein ERF4 [Gossypium hirsutum] (GB:AAX07461.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 2.87366071365974 21.9876672307912 3.56769438005545e-10 3.13431939006827e-07 20.2198521896154 9.76118784501175 2.87366071365974 0.168911852365962 AT5G54930_at 5.22348744881399 4.90259099174651 7.28224487910028 7.12337611145887 7.38397897545408 7.31377772973766 3.57120082671326 3.90070804915746 2.41323704052879 2.99681914990674 3.86983100645645 3.53039706641251 4.15432270807331 3.91918864007419 3.61018024343783 4.04190575958617 5.36499844302075 3.87472903035200 2.83580171583683 0.23152351773817 0.230159741954510 0.238467107971196 0.231814624321775 0.239069415991843 0.23932774614315 0.233254390633104 0.228642579577046 0.235963216285857 0.24480980929327 0.236073905437801 0.227946667843847 0.232223212989403 0.234909283329272 0.24027642393743 0.230455752647941 0.248917515744664 0.232211546456813 0.242570915543571 5 5|0 -|/ 22323283 22323753 22323444.3 22322959 22324788 - gene protein_coding_gene TRUE TRUE AT5G54930.1|AT5G54930.2 AT hook motif-containing protein|DNA binding similar to AT hook motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G52890.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 2.08671120245789 21.9573393141527 3.61913694348070e-10 3.13431939006827e-07 20.2113654114568 9.23482733365648 2.08671120245789 0.0850818544198535 AT5G52760_at 8.39989098101328 8.8836549440373 10.7497470534673 10.8387170542827 9.23752540749335 8.50322439655938 2.0734343242092 2.10701751265151 4.85245999997114 3.03267970949015 4.05164796705657 4.75217818933812 3.82859058530707 4.80140403715593 4.40328288415851 5.74493408157421 4.15612508769087 5.14526699551786 3.13326387815053 0.253227839175258 0.258030704714178 0.254291019467251 0.253670521940683 0.267119650564535 0.273860332123689 0.262163361943922 0.268644965162288 0.267675961107041 0.260981651465001 0.253227839175258 0.253227839175258 0.257209504133773 0.262528607337173 0.261832911583025 0.260811323584497 0.265959885277659 0.269335136633536 0.254055748054049 5 0|5 /|+ 21404344 21404701 21404588.778 21404050 21404925 + gene protein_coding_gene TRUE TRUE AT5G52760.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 2.70196578503857 21.9508874123625 3.63018495225301e-10 3.13431939006827e-07 20.2095571496930 11.740766421387 2.70196578503857 0.153059883594758 AT5G17420_at 1.52967563370167 1.32109608553996 4.36636422039562 4.32731224022755 3.40721599445723 3.60749134768492 1.98518868713862 2.00479281465802 2.16060809200871 2.13183396466769 2.74590338454096 3.72932442769665 3.29737950954346 3.50973293705678 4.19099967559652 2.96396677982249 6.64506846489117 4.19983416961625 2.86988872749002 0.226349304332624 0.227282800114772 0.23009094834128 0.228894361525118 0.226504506218835 0.21976391026063 0.225033472042336 0.218009655866459 0.220108145330246 0.223242574228306 0.222696555635247 0.226322646033822 0.218477897932835 0.22334417682936 0.221292683985663 0.22587772254538 0.232960922749971 0.225387311561108 0.218843040414641 5 0|5 /|- 5736879 5737416 5737158.9 5736632 5741467 - gene protein_coding_gene TRUE TRUE AT5G17420.1 IRX3 (IRREGULAR XYLEM 3, MURUS 10); cellulose synthase encodes a xylem-specific cellulose synthase Identical to Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) (CESA7) [Arabidopsis Thaliana] (GB:Q9SWW6;GB:Q9XHP6); similar to CESA2 (CELLULASE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to cellulose synthase 3 [Eucalyptus grandis] (GB:AAY60845.1); similar to Zinc finger, RING-type; Cellulose synthase; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE78816.1); similar to cellulose synthase [Populus tremuloides] (GB:AAM26299.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.86987010965258 21.9404304781157 3.64816937794693e-10 3.13431939006827e-07 20.2066243148333 5.96750200963429 1.86987010965258 0.0506092510460972 AT5G47180_at 6.88364734788348 6.99057254883378 8.38271158533857 8.54883107894103 8.93920857520468 8.63493178035286 5.63540976750928 5.69352937099053 5.40834286239798 5.00268526569944 6.54437229742373 5.70733340991479 7.1948669349327 6.6620121768258 6.93159193247077 6.1833966298132 7.06172406794683 6.54745082436212 4.74625664558708 0.237576000588195 0.237576000588195 0.239501439057323 0.242731013504188 0.239809382903559 0.242950800701065 0.238116476180917 0.237576000588195 0.248016300220025 0.239227068270413 0.237576000588195 0.237576000588195 0.237576000588195 0.242060099882802 0.237576000588195 0.240183982556441 0.247813067125097 0.237830896128959 0.239280636482737 5 5|0 -|/ 19178642 19179838 19179397.375 19178371 19181024 - gene protein_coding_gene TRUE TRUE AT5G47180.1|AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1), protein binding [Arabidopsis thaliana] (TAIR:AT3G60600.1); similar to vesicle-associated membrane protein, putative [Brassica oleracea] (GB:ABD65040.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) 1.93864813623572 21.9181449525795 3.68682295732691e-10 3.13431939006827e-07 20.200365300211 13.2918661529348 1.93864813623572 0.0635822101710781 AT5G07440_at 5.8384414096946 5.62456889184130 6.66690873734943 6.57428526652445 6.29066924878458 5.95482836366565 4.30570759985532 4.11962464511545 3.00616888077877 3.42454416559093 6.01656901176054 6.45831627133561 5.94367335596614 6.40216258210719 6.42568053981705 5.76648455651885 6.23929225861093 5.12385927611227 3.79654012598196 0.246651281334512 0.245496950570307 0.245340889306096 0.251351594423206 0.243683594050126 0.242393080561097 0.252791236869610 0.247744841693656 0.278561037106871 0.254359219706464 0.244328651680094 0.241636048139136 0.241636048139136 0.241636048139136 0.243288121683899 0.241636048139136 0.255576089961355 0.253389786047079 0.254909773036377 5 5 + 2357269 2357962 2357668.818 2355938 2358195 + gene protein_coding_gene TRUE TRUE AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2) (GDH2) [Arabidopsis Thaliana] (GB:Q38946); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to glutamate dehydrogenase [Brassica napus] (GB:BAB62170.1); similar to Glutamate dehydrogenase A (GDH A) (GB:O04937); similar to NADH glutamate dehydrogenase [Vitis vinifera] (GB:CAC18730.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) 2.01875380409952 21.7954463492646 3.90781528817466e-10 3.25830568647016e-07 20.1656929591882 10.3999238315101 2.01875380409952 0.0777276573124438 AT5G15640_at 5.83934956152366 5.6227793608447 6.90173923142375 7.08092607913731 7.15551722297145 6.88264644555012 4.59672002812221 4.45547291719096 3.84199372574970 3.37805881768007 5.67510089504527 5.46324624718735 5.36344153274893 5.89828347402638 5.61535808984393 5.28027079275977 5.70900384536488 5.6523045821764 3.32029304392629 0.212635364769264 0.211281229794182 0.227810904857550 0.222333844867337 0.219249703078153 0.235731312916619 0.217163572276983 0.218610656220005 0.231240709333536 0.219289791818951 0.223091843374804 0.213898809049999 0.222518244437665 0.211807783763503 0.218810315595602 0.218169741095837 0.216680205484943 0.218809635327507 0.225228921042868 5 5|0 +|/ 5088562 5089482 5088978.9 5087374 5090043 + gene protein_coding_gene TRUE TRUE AT5G15640.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96928.1); contains InterPro domain Retrovirus capsid, N-terminal core; (InterPro:IPR008919); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.97265221556285 21.7071625428718 4.07576701330687e-10 3.30118152774761e-07 20.1405220890372 10.6146812116019 1.97265221556285 0.0720663672698357 AT5G25210_at 6.67239413521113 6.64996769269919 6.57882028991449 7.12767846918029 8.63976374376027 8.26527928916878 2.43375924846595 2.47788081035337 3.0643443584175 2.8798442817626 4.57617083030076 4.11296417397163 4.24197322587465 4.56661202099567 4.33989942925153 3.59191103214351 4.46555121214628 4.33645893799222 2.3295765013254 0.303075955874047 0.303145537319627 0.319022202831601 0.309593776990286 0.30551684870746 0.312910662904011 0.307039875603143 0.297890124101137 0.296127399623461 0.29193416736811 0.29193416736811 0.29193416736811 0.300559879342585 0.293776652845687 0.29193416736811 0.29193416736811 0.314899719282765 0.29193416736811 0.301922594170971 5 5 + 8724104 8725407 8724605.182 8723961 8725774 + gene protein_coding_gene TRUE TRUE AT5G25210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32030.1) 2.30770293516145 21.6888840747346 4.11151636985364e-10 3.30118152774761e-07 20.1352870993146 9.62412512067903 2.30770293516145 0.115303449284434 AT5G46240_at 6.62653357674318 6.9145614271862 8.58677468797231 8.61221664508355 8.21379139160571 7.89541036109737 5.44910732530111 5.80566245983278 3.64700500731078 5.3387810384186 6.93525526103963 6.99709767450662 6.98859511570274 6.04753683017792 6.47123874779554 6.78700803833488 7.89511334753464 8.10107887294763 5.6958468011268 0.203670241782935 0.198734313764769 0.195753795880192 0.197044499775424 0.195753795880192 0.195846939813416 0.199231444930849 0.205732104463579 0.226573529322906 0.202649670333192 0.195753795880192 0.199705289684666 0.201360501805289 0.197587176552125 0.203155339436447 0.195753795880192 0.196838196268903 0.201291813897439 0.212423725045364 5 5 - 18760939 18761527 18761132.818 18760793 18763957 - gene protein_coding_gene TRUE TRUE AT5G46240.1 KAT1 (K+ ATPase 1); cyclic nucleotide binding / inward rectifier potassium channel potassium channel protein (KAT1) Identical to Potassium channel KAT1 (KAT1) [Arabidopsis Thaliana] (GB:Q39128;GB:Q42426); similar to KAT2 (K+ ATPase 2), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18290.1); similar to inward rectifying potassium channel [Brassica rapa subsp. pekinensis] (GB:AAX19659.1); similar to inward rectifying shaker-like K+ channel [Vitis vinifera] (GB:AAL09479.1); similar to inward rectifying potassium channel [Vitis vinifera] (GB:AAL24466.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 2.13103497228007 21.4954522349637 4.5115625155457e-10 3.49301213992474e-07 20.079387335663 13.2238787851646 2.13103497228007 0.0966793976101821 AT5G52750_at 9.44271746941525 9.6586250740241 10.7252941055625 10.8251908705656 10.1213292346146 9.87365135375362 5.66933651080428 6.09101608244146 7.17595656201916 5.38835520579494 6.95087583936915 8.14016626035521 6.09422751924057 7.76873503834842 5.69482574651933 7.44285196687434 7.81425907694167 7.30329748583046 4.27719085450725 0.264778343770096 0.268320673728774 0.268036679240228 0.271729550073812 0.261498151018486 0.278253020885348 0.273228008475476 0.274846377855438 0.284247571430639 0.276903308565844 0.268253409588887 0.267166127106714 0.265149721667899 0.275993607481734 0.282559220670035 0.262459378503777 0.274290134634695 0.278407615326222 0.262822394133838 5 0|5 /|+ 21401743 21401975 21401883.222 21401269 21402150 + gene protein_coding_gene TRUE TRUE AT5G52750.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 2.10413163309862 21.4268383969114 4.66352857151783e-10 3.54732458284556e-07 20.0593367622461 15.4333896247103 2.10413163309862 0.0941126968592137 AT5G39520_at 5.86955274165984 5.35599741186476 8.74047283948585 8.42794403421249 7.81581020269029 7.70321912311163 2.32752620430409 2.14653986535593 2.13675476846589 1.88258250046290 2.39721493704189 1.88612864864356 2.07541652622366 2.03181086858127 2.03597653392587 1.85156348203273 2.48195882703976 2.44989733875385 1.80926649491328 0.323262200512457 0.313585250879591 0.345975064286489 0.341401114869715 0.328713411612138 0.345015651048777 0.299630707812935 0.299630707812935 0.300806309179777 0.308343427438389 0.3058208431143 0.300023829161915 0.299630707812935 0.306345655668447 0.299630707812935 0.309009969729363 0.304518169779617 0.313799244606946 0.314487586988561 5 5|0 -|/ 15841364 15842521 15841652.889 15840963 15842720 - gene protein_coding_gene TRUE TRUE AT5G39520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39530.1); similar to hypothetical protein MtrDRAFT_AC119412g1v1 [Medicago truncatula] (GB:ABE86761.1) 2.22766773403927 21.3360825604804 4.87318903972068e-10 3.64289293597768e-07 20.0326350730790 8.09543971111612 2.22766773403927 0.110382037516187 AT5G60540_at 8.55322428871387 8.66603378517151 9.57176645303541 9.34667564868002 10.1283967835139 9.82675993545064 8.0568544373358 7.8572298348651 5.15137198460639 6.12501097748745 7.70623545503454 7.36510006237417 8.28658143119005 8.31220126960597 7.73296163610041 7.41640147374814 8.75447618714081 8.00094510983335 5.237153569321 0.169823430104042 0.154971635313623 0.157610470879366 0.155062001714302 0.164272165346447 0.155211723010159 0.167358259031763 0.160896720051488 0.176197429556137 0.159953004709743 0.160056483849599 0.158908763872514 0.160162212886801 0.159783072807406 0.162899891551486 0.159241022699995 0.169838935372783 0.163878920081036 0.166330226627835 5 0|5 /|- 24354105 24355127 24354553.111 24353849 24356028 - gene protein_coding_gene TRUE TRUE AT5G60540.1 ATPDX2/EMB2407/PDX2 (PYRIDOXINE BIOSYNTHESIS 2); glutaminase/ glutamyl-tRNA(Gln) amidotransferase/ protein heterodimerization Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex. Identical to Pyridoxal biosynthesis protein PDX2 (EC 2.6.-.-) (Probable glutamine amidotransferase) (AtPDX2) (Protein EMBRYO DEFECTIVE 2407) (PDX2) [Arabidopsis Thaliana] (GB:Q8LAD0;GB:Q56ZP9;GB:Q9FKJ3); similar to SNO glutamine amidotransferase; CobB/CobQ-like glutamine amidotransferase [Medicago truncatula] (GB:ABE80773.1); contains InterPro domain SNO glutamine amidotransferase; (InterPro:IPR002161) 1.93870738481928 21.0357254382324 5.64390878658323e-10 4.10125323557482e-07 19.9427741831337 15.7265551484791 1.93870738481928 0.0762671797799769 AT5G16380_at 4.39470560427343 4.71119620632967 5.23211423218369 5.15353155062548 5.51540324721397 5.66126422714704 2.04363847587404 2.21717115644565 1.97790957107084 1.84075147238919 3.30820467132554 3.13192359294293 3.41107223341122 3.51095157943009 3.78618695226498 3.2108895900954 4.38956688920337 3.98400465093569 1.76317283409415 0.294900890534557 0.279291109917913 0.274240352886142 0.284358529531992 0.282670816119292 0.27984755030451 0.298040689299861 0.285439448112588 0.286876071523952 0.281191535640463 0.278514399978539 0.277069539703919 0.277117638037753 0.275019534312705 0.274240352886142 0.274240352886142 0.280602759929427 0.274240352886142 0.287732557098551 5 5 - 5360128 5360480 5360293.364 5359366 5360713 - gene protein_coding_gene TRUE TRUE AT5G16380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07470.1); similar to hypothetical protein [Nicotiana tabacum] (GB:CAI84656.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.88994459049747 21.0243753861061 5.67553353355689e-10 4.10125323557482e-07 19.9393329194697 7.09223374374623 1.88994459049747 0.068729189858571 AT5G47070_at 8.5099640139111 8.46931429062973 9.91202956508257 9.92660413117845 9.5459673272135 9.26072771248245 6.1888374057176 6.32414248713141 8.25573620688814 6.47361444685537 8.45048518170418 8.29668701984693 7.83678023474516 8.72591050250963 8.08557129992224 8.42383428237618 8.3082782454439 8.71352260971471 6.46546968615253 0.156421074128078 0.150740427397906 0.152947781746408 0.152125457473072 0.150175738234621 0.150175738234621 0.179101198200331 0.159884936101185 0.157171157337787 0.170308787916217 0.155135549218823 0.151681694533562 0.159565353330609 0.156624381163567 0.158093504482978 0.150175738234621 0.152240848979164 0.156139888271583 0.172186670134847 5 5|0 -|/ 19135991 19136501 19136254.1 19135770 19138136 - gene protein_coding_gene TRUE TRUE AT5G47070.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G17660.1); similar to protein kinase, putative [Brassica oleracea] (GB:ABD65030.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.78923059668798 20.7370942748526 6.54410274503856e-10 4.65137566796023e-07 19.8511030292218 16.2272352593341 1.78923059668798 0.0551428091449604 AT5G57630_at 9.85898533831777 10.0105168962714 10.2396548567126 10.2580886603479 11.2445668636161 10.8577795975758 8.0054871148889 7.8086250482668 5.88069512196450 5.91522169919154 7.55610887927279 7.72378674305524 8.26816596918902 8.43314138117314 6.98586469918089 7.75174707481924 8.40213158948796 8.2017746573761 5.58961915457933 0.209303082649342 0.208619342672846 0.208748020298830 0.206281155424028 0.222187562752158 0.209081391465639 0.204532770889946 0.208761149683776 0.213483052819004 0.224158825992576 0.205451772215561 0.2046016235034 0.202422947476625 0.212754000479522 0.223500843590529 0.209220608778256 0.215675939541318 0.202422947476625 0.224516621340143 5 5|0 -|/ 23358328 23359329 23358983.778 23358073 23360484 - gene protein_coding_gene TRUE TRUE AT5G57630.1 CIPK21 (CBL-INTERACTING PROTEIN KINASE 21); kinase CBL-interacting protein kinase similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to Os12g0132200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066079.1); similar to Os02g0178000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046073.1); similar to CBL-interacting protein kinase 24 [Populus trichocarpa] (GB:ABJ91230.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.92464018037136 20.6446009841884 6.85386719201754e-10 4.79297471266517e-07 19.8222281612133 16.6407224383860 1.92464018037136 0.079616558734702 AT5G46860_at 8.59835624356533 8.60283751996403 9.52473964021827 9.46128695800655 9.92323077790042 9.65699051432307 7.24675219880687 6.87503999569448 6.86045977607832 6.57885183617476 8.63576567606263 8.69394949135336 8.5898803269587 8.62309715408649 8.51535887371869 8.38057388832054 8.66976101611598 8.60467341139325 6.23820420224633 0.186352997066238 0.189228675322039 0.193417448281487 0.191966555099262 0.208399795654596 0.193603071416389 0.193467822772176 0.195518708638677 0.213451333062983 0.213012412501181 0.179556192943960 0.179556192943960 0.179556192943960 0.179556192943960 0.190420843303393 0.182026041917501 0.181964374434432 0.182417590512064 0.217777537361361 5 5|0 -|/ 19029572 19030421 19029880.7 19029248 19031231 - gene protein_coding_gene TRUE TRUE AT5G46860.1 VAM3 (syntaxin 22); t-SNARE Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Identical to Syntaxin-22 (AtSYP22) (AtVAM3) (SYP22) [Arabidopsis Thaliana] (GB:P93654); similar to SYP23 (syntaxin 23) [Arabidopsis thaliana] (TAIR:AT4G17730.2); similar to syntaxin-like protein [Solanum tuberosum] (GB:ABA46757.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 1.92038801234457 20.5797046619668 7.08075841527896e-10 4.8730444189853e-07 19.8018302919055 16.3103064400187 1.92038801234457 0.0798868322779548 AT5G65850_at 3.25846135855012 3.6658146381943 5.33164508077471 5.37112611227227 5.84634102755381 6.3429142029149 2.48139102481518 2.54693847215087 2.2924771520748 2.42873879045022 3.88662384459117 4.05177055779584 4.34059461649841 3.97070328649189 3.65070748474314 4.39251562318074 4.49643604877548 3.86419580163177 2.78184814113836 0.254776667908247 0.247425018280416 0.255860027330105 0.264915766700955 0.263579550869294 0.273142554204454 0.256002710567311 0.255692617230862 0.26719235825336 0.259063317694275 0.252086878945506 0.25124864628811 0.252041078334075 0.247425018280416 0.247425018280416 0.248309832171045 0.247425018280416 0.250716128344453 0.267039527044281 5 5 + 26364154 26364649 26364408.818 26363540 26364836 + gene protein_coding_gene TRUE TRUE AT5G65850.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G31470.1); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 2.15776363959687 20.5439127959713 7.2093949856587e-10 4.88404873138522e-07 19.7905312452070 7.64693637424561 2.15776363959687 0.111935313993078 AT5G42940_at 6.10358497050117 6.35741257972927 7.43869938730709 7.64954686545851 7.64932757873352 7.74567431750131 5.77251742626522 5.7858861338041 4.6632821578715 5.10044695076354 7.2743622229249 7.1132465974316 7.51559676299488 7.3346778246931 6.39576571745945 7.67204847887596 7.66275585306103 5.74965811647399 5.60632995596853 0.192731109586741 0.194305178803217 0.198108483483572 0.195444016877653 0.192547093745282 0.202464888168329 0.199350461400757 0.193566520372704 0.195276293528807 0.198817586124600 0.203967328164066 0.194456946227457 0.191947456866693 0.196881024567577 0.200915551815556 0.195470516389304 0.208901116620667 0.196002725397229 0.195206430267777 5 5|0 -|/ 17233896 17234877 17234364.111 17233558 17237718 - gene protein_coding_gene TRUE TRUE AT5G42940.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G45180.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE89604.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.79118634244000 20.4993473000713 7.3731444600771e-10 4.91813594038253e-07 19.7764133936691 12.9193896415495 1.79118634244000 0.0595334531003062 AT5G12440_at 4.30998714567666 4.2578426482089 4.75861776158834 4.87767193864232 6.72943727523922 6.35259806543751 3.28882403229299 3.47993344651624 3.85580758094407 3.09326750114282 5.80205511719204 5.84935771561453 5.20777307950017 5.90347041056719 5.51195529907408 4.73792229945774 4.82214492149816 5.12842301406677 3.40753725826117 0.22578826974355 0.222970811081258 0.233771308697749 0.226553376785744 0.235738977729115 0.24799779965361 0.227007351562979 0.227627718315544 0.239242906658799 0.227837753795388 0.228008352458859 0.225418092943004 0.235266706951446 0.222970811081258 0.222970811081258 0.224785851169549 0.246421795589635 0.223907444355309 0.224872316711706 5 0|5 /|- 4035903 4036459 4036199.1 4035295 4038798 - gene protein_coding_gene TRUE TRUE AT5G12440.1 zinc finger (CCCH-type) family protein similar to RNA binding [Arabidopsis thaliana] (TAIR:AT3G21100.2); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14273.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.88180903036256 20.4020883044716 7.74479700092891e-10 5.03001407659773e-07 19.7454125964175 9.16815996198562 1.88180903036256 0.0765018170280073 AT5G10140_at 1.25889339915248 1.52413862995114 2.74741229869700 2.57722232049192 1.80627304132546 2.33853261052234 1.09751737036176 1.47309165361851 1.77603183816598 2.37777772449337 8.82265220079692 9.1184442023034 5.34732672134083 3.72407764089235 6.32619978950423 1.95117534155053 2.48640032476687 5.95836504752246 1.80416966749449 0.269112941948264 0.2665492953505 0.265969952991051 0.272135964624169 0.274121631782743 0.276410157662309 0.268254160682998 0.274125821673558 0.279580917056504 0.263804000386682 0.287573469674167 0.283365333494732 0.283251729951855 0.267516132916076 0.281792895339736 0.275992043035238 0.28134883099562 0.279546252226997 0.263804000386682 5 5|0 -|/ 3173757 3179276 3176250 3173498 3179449 - gene protein_coding_gene TRUE TRUE AT5G10140.1|AT5G10140.2 FLC (FLOWERING LOCUS C); transcription factor|FLC (FLOWERING LOCUS C) MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex. Identical to FLOWERING LOCUS C protein (MADS-box protein FLOWERING LOCUS F) (FLC) [Arabidopsis Thaliana] (GB:Q9S7Q7); similar to MAF1 (MADS AFFECTING FLOWERING 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77080.4); similar to flowering locus C [Thellun (GB:AAY34137.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 2.25489344317748 20.3949432712518 7.77289606800512e-10 5.03001407659773e-07 19.7431248120025 5.5792967831664 2.25489344317748 0.125231800204515 AT5G25350_at 8.47379523663722 9.00429436638582 8.98949009363501 9.11053526887884 9.92452730073845 9.6689195409445 6.3170856904393 7.04946850609967 7.23767910523725 6.20208432886746 10.4391228388763 10.0713698826629 10.4254573251517 10.2825187731630 10.2572204392350 10.5649856823250 10.7993583304625 10.2254009498301 7.19319236401954 0.164401055107534 0.15919379954508 0.159769466568991 0.160495409299891 0.164282093552328 0.161468292476898 0.187097142148059 0.174128241806184 0.180921511708580 0.195848673593831 0.159588895621901 0.164481543442148 0.15919379954508 0.16799241415085 0.15919379954508 0.171532471382433 0.160271974033951 0.15919379954508 0.195318589596713 5 5 - 8794879 8795397 8795175.727 8794255 8797023 - gene protein_coding_gene TRUE TRUE AT5G25350.1 EBF2 (EIN3-BINDING F BOX PROTEIN 2) Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. similar to EBF1 (EIN3-BINDING F BOX PROTEIN 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G25490.1); similar to EIN3-binding F-box protein 2 [Lycopersicon esculentum] (GB:ABC24972.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE90278.1); similar to EIN3-binding F-box protein 1 [Solanum lycopersicum] (GB:ABB89717.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 2.60886722308197 20.3349764038592 8.01316364478704e-10 5.04882793790893e-07 19.7238677614281 17.1976801056805 2.60886722308197 0.16397339668894 AT5G22570_at 4.4153345601545 4.22301159600217 9.06258521472237 9.12825337546882 5.01761728471625 4.52901547629596 1.25089884446032 1.55671588624888 2.06310417235958 1.79662108061238 1.31680812491937 1.79942431341511 1.34205880703633 2.00793685376492 1.44893750500783 1.95132399793265 1.90026853345322 2.45149185572534 1.17731515451768 0.243447264072743 0.232188600014722 0.233898878739026 0.224393536784481 0.222872370686352 0.242390295058213 0.220967170053375 0.222480385074242 0.218569147485786 0.216494949419311 0.221399037742827 0.219941987531294 0.217628181249181 0.216494949419311 0.219000099663225 0.216738893814953 0.220538982854782 0.218990393093059 0.230965957876304 5 5 - 7495631 7496247 7495892.636 7495542 7496787 - gene protein_coding_gene TRUE TRUE AT5G22570.1 WRKY38 (WRKY DNA-binding protein 38); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 38 (WRKY DNA-binding protein 38) (WRKY38) [Arabidopsis Thaliana] (GB:Q8GWF1;GB:Q9FK82); similar to WRKY62 (WRKY DNA-binding protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT5G01900.1); similar to DNA-binding protein 4 [Nicotiana tabacum] (GB:AAF61864.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 2.08557269791401 20.3296573658031 8.03486378771647e-10 5.04882793790893e-07 19.722154813329 6.62607638879369 2.08557269791401 0.105769705257934 AT5G46070_at 5.95782244152609 5.96231755424518 6.54672548698352 6.67130268349733 6.98328812718594 6.93648697417456 5.55392527918087 5.70075208415645 4.63744425444469 4.63872221399517 7.22805775402148 7.40961077095488 7.0922294963328 7.23288679004942 6.90026294016407 7.3414645012677 6.9170736973075 6.47501829330831 4.95240984953837 0.171239142026549 0.172022895973547 0.171133008988853 0.169837945168695 0.170371974537239 0.169604532318182 0.172143344867550 0.178289332866828 0.191860440295659 0.186530651856242 0.172040714215708 0.174241133454751 0.175305694657961 0.171369707784636 0.169316505174946 0.173932825675427 0.175604965274354 0.174590951346148 0.186153707928776 5 5 + 18705036 18705543 18705247.636 18700591 18705934 + gene protein_coding_gene TRUE TRUE AT5G46070.1 GTP binding / GTPase similar to guanylate-binding family protein [Arabidopsis thaliana] (TAIR:AT1G03830.1); similar to Guanylate-binding protein, N-terminal domain containing protein [Tetrahymena thermophila SB210] (GB:XP_001018996.1); similar to Os02g0307000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046641.1); contains InterPro domain Guanylate-binding protein; (InterPro:IPR003191) 1.66123161797478 20.2351563316165 8.43129890912578e-10 5.2222491597412e-07 19.6915889714626 12.1977947304113 1.66123161797478 0.0343015745694195 AT5G13200_at 8.61117985133741 8.67091340777573 9.48028917244266 9.41252852526496 9.23814173200017 9.12974367560447 6.76682216499341 6.60798730838349 3.98465097149217 4.91213974240802 5.74728588003588 5.94303273059123 6.88052368600891 6.55545307364402 5.15427982874541 6.22717199604233 6.74382784019407 6.24808917735788 4.64404525572811 0.244171269163660 0.245967261580299 0.247447592249018 0.248483575441607 0.247128436699659 0.245553451409166 0.244256135497571 0.242948047463543 0.272602597034288 0.261231641966697 0.249471388673205 0.248395521153407 0.242948047463543 0.253823495673116 0.246877193017092 0.24474575633227 0.271620238503252 0.248096695786642 0.266779779042904 5 5|0 +|/ 4207327 4208036 4207648.7 4207007 4208292 + gene protein_coding_gene TRUE TRUE AT5G13200.1 GRAM domain-containing protein / ABA-responsive protein-related similar to GRAM domain-containing protein / ABA-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G22475.1); similar to ABA-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98234.1); contains InterPro domain GRAM; (InterPro:IPR004182) 1.66239806495346 20.1505963349495 8.8041883292979e-10 5.31638704733934e-07 19.6640241985788 13.8402357379521 1.66239806495346 0.0367667873299314 AT5G04170_at 7.97429662090103 7.85627570083548 8.8875597002523 8.6755295768276 9.14298357429458 8.7160845478827 6.49501229720266 6.4320175488918 6.53334487904482 6.08202856505915 8.33909316654394 8.31357347742474 8.5289713859712 8.45465789219035 8.44793762594145 8.18192183803792 8.31410428983884 7.9706361848189 5.82834303864459 0.169883318544439 0.165068942429289 0.163977220927173 0.164086670001224 0.167870802438271 0.175532047954161 0.169206782854505 0.172268959974602 0.176965455617174 0.169283123112166 0.164848637127990 0.163977220927173 0.172658178238351 0.169643261894627 0.164113415716933 0.164536033782689 0.163977220927173 0.164690925322065 0.167677366648826 5 5|0 +|/ 1145950 1146864 1146192.9 1145432 1147782 + gene protein_coding_gene TRUE TRUE AT5G04170.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G10300.3); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); similar to putative cysteine protease [Pisum sativum] (GB:CAB63845.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.91854764810148 20.1452150523941 8.82852081490049e-10 5.31638704733934e-07 19.6622631186844 15.2558536843087 1.91854764810148 0.0856746133727943 AT5G56630_at 8.8390652069326 9.02388613297981 9.82139034358323 9.8493559853216 9.53215083159418 9.45738099233743 7.84308910681759 8.00567253464334 6.17772282389195 7.34929904110317 8.78646940380747 9.04584856420968 8.88037345009569 8.65786175515288 8.79898357100569 8.78672037735029 8.7083178973834 9.00343934172774 6.63339267600004 0.166446696957041 0.160989302575337 0.156677758194755 0.158153777061430 0.156677758194755 0.15903634833588 0.162423407202753 0.162075578338712 0.192149626691081 0.173814598720869 0.161656192804808 0.157527564705051 0.156677758194755 0.167583369544865 0.159424111571016 0.159456958284422 0.167572119665357 0.169739779507158 0.182189193888119 5 5 + 22943291 22943908 22943606.909 22941148 22944189 + gene protein_coding_gene TRUE TRUE AT5G56630.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE84859.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 1.67525245381283 19.9475165520790 9.77543247956519e-10 5.67867140359153e-07 19.5969863620827 16.8233188794879 1.67525245381283 0.0447823045764883 AT5G29000_at 4.85543746837471 4.60788483347195 6.92075194504965 6.78595791712371 6.6938819768842 6.9337639011497 4.88808904648623 5.12445026393259 4.03188194412216 4.87304615670406 6.2176039244385 5.91642745831116 5.77274387949285 5.9488118835305 6.02056122972537 6.36162833470895 6.95938448507825 5.77961420968959 4.34807286509812 0.207311750581457 0.199707538335743 0.204662625739599 0.204429615367226 0.205451422941866 0.220312244572342 0.209713224348511 0.203312389767399 0.218357034729593 0.208374511308815 0.200062368803696 0.202979957443631 0.209144316485549 0.210454207699412 0.200856206943876 0.199707538335743 0.207598579296279 0.201891410653971 0.207233535377292 5 5|0 -|/ 11022355 11023477 11022883.778 11022087 11024964 - gene protein_coding_gene TRUE TRUE AT5G29000.1|AT5G29000.2|AT5G29000.3 myb family transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to CDPK substrate protein 1; CSP1 [Mesembryanthemum crystallinum] (GB:AAF32350.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.83452673448295 19.9234566869419 9.89804548739376e-10 5.67867140359153e-07 19.5889647703869 11.1211591261908 1.83452673448295 0.075998724405227 AT5G57050_at 5.27993036193545 5.45874181719661 7.4694757729878 7.44558601953824 7.45167154916817 7.25245286079387 6.34489205000762 6.14690586211052 4.96827079337837 5.35058532827641 6.90489546445738 6.96723450785817 7.57332200612658 6.52627738858599 6.50687524408985 7.20031506546136 8.03394400608034 7.22617892651787 5.43837887905102 0.194030989406823 0.187416963007399 0.186335424098276 0.188828157495982 0.194820339669527 0.189846127757483 0.190582087981563 0.187570341701865 0.207759163090281 0.192314641423352 0.187307371300030 0.1840166412154 0.192198948688214 0.187648765861516 0.185784413729516 0.187662863487944 0.194870510176995 0.1840166412154 0.196803569689613 5 5 + 23105703 23106409 23106032.091 23104461 23106853 + gene protein_coding_gene TRUE TRUE AT5G57050.1 ABI2 (ABA INSENSITIVE 2); protein phosphatase type 2C Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. Identical to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2) (ABI2) [Arabidopsis Thaliana] (GB:O04719); similar to ABI1 (ABA INSENSITIVE 1), calcium ion binding / protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT4G26080.1); similar to Os05g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056498.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:AAT39223.1); similar to Os01g0583100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043415.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.73107384352737 19.9137573530844 9.94794910002468e-10 5.67867140359153e-07 19.5857262082841 12.7911030332418 1.73107384352737 0.0577678327975695 AT5G63790_at 9.04640637944937 9.16179877288962 10.4306127568930 10.5469180178878 10.1697578619161 9.5473022597648 7.97563783261817 8.1004340904785 7.31214258297029 6.91718487768768 9.41965460065649 9.6146827592900 9.57390717978544 9.83313771687848 8.92288872887714 9.8911995546668 9.56222241125871 9.70168091473165 6.66641691590414 0.160270453810821 0.148633064338067 0.146970281789809 0.155016286054112 0.156392945367711 0.144762988044105 0.161666614160440 0.149048086954421 0.176058099279081 0.172101769420004 0.144762988044105 0.156254065914657 0.156009298799393 0.150853200201041 0.154594504213689 0.153812084450112 0.146575166519169 0.151497596357284 0.180676235892336 5 5 - 25544147 25544685 25544334.727 25543735 25545239 - gene protein_coding_gene TRUE TRUE AT5G63790.1 ANAC102 (Arabidopsis NAC domain containing protein 102); transcription factor similar to ATAF2 (Arabidopsis NAC domain containing protein 81) [Arabidopsis thaliana] (TAIR:AT5G08790.1); similar to NAC-domain protein 5-1 [Brassica napus] (GB:AAP35050.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 2.10112603150195 19.8877507380906 1.00831159739744e-09 5.67867140359153e-07 19.5770291054819 17.6374434258816 2.10112603150195 0.113462033727617 AT5G40760_at 6.70715315960987 6.85573863825258 8.46990836496347 8.48296561889765 8.26347487338409 8.00633084551519 5.97697152890657 5.72994097677145 6.75039186236735 6.38478838425448 8.29722521900413 8.4045014921467 7.31293025935274 8.20820434722191 8.3380658197217 8.23397124540033 7.49426144693206 8.50385290472529 6.47273057148115 0.185201752084199 0.186345166878676 0.182543536844801 0.184952056992634 0.181641579715868 0.188485265725514 0.186838198733254 0.199361798598374 0.209286512073425 0.197925542982333 0.181641579715868 0.185913266727839 0.185965918164259 0.185777605816179 0.189726244809832 0.185743828081757 0.193551021163746 0.190709074801458 0.189997204745776 5 5 + 16330526 16331747 16331196.364 16327976 16332002 + gene protein_coding_gene TRUE TRUE AT5G40760.1 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6); glucose-6-phosphate 1-dehydrogenase Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. Identical to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 (EC 1.1.1.49) (G6PD6) (G6PDH6) (ACG12) [Arabidopsis Thaliana] (GB:Q9FJI5;GB:Q9SUJ9); similar to G6PD5 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5) [Arabidopsis thaliana] (TAIR:AT3G27300.3); similar to glucose-6-phosphate 1-dehydrogenase cytoplasmic isoform-like [Solanum tuberosum] (GB:ABB55386.1); similar to glucose-6-phosphate dehydrogenase [Populus suaveolens] (GB:AAR26303.3); similar to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD) (GB:P37830); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) 1.77568758445855 19.8697035786308 1.01780928584921e-09 5.67867140359153e-07 19.5709821145327 14.6291089330447 1.77568758445855 0.0668885448249119 AT5G23390_at 6.95283678446464 6.94059304186366 8.00876426304853 8.22024212524298 8.61605577789374 8.31957288805893 6.20862037963355 6.3286430329266 5.3968800031779 5.63402119798165 7.27629117689165 7.47768180710168 7.35192264369252 7.51543868365472 7.57896205762104 7.79380236278283 7.49019658710973 7.04300996288915 5.70873590113244 0.2187174645984 0.216591284326443 0.225606077623956 0.227235674004202 0.219866599817181 0.217843199360451 0.215044752640058 0.231689889032444 0.222160725738876 0.214427480902109 0.219700660621759 0.212607986457047 0.217644539441088 0.218967005186391 0.224661327981561 0.212492279910526 0.223892670902429 0.219213207269982 0.217923869166640 5 5|0 -|/ 7870748 7871499 7871105.3 7870516 7874508 - gene protein_coding_gene TRUE TRUE AT5G23390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os04g0677400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054264.1); similar to Os02g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047529.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25093.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Protein of unknown function DUF639; (InterPro:IPR006927) 1.77225978997975 19.8625549314754 1.02159838867892e-09 5.67867140359153e-07 19.5685841943613 13.9598121337992 1.77225978997975 0.0663908461947069 AT5G11150_at 7.3501202171625 7.58463612175349 8.3084521249321 8.06141632141901 9.84386783817906 8.58896620593911 4.85010550720891 4.88572148010978 2.05481642993887 2.69143159905886 6.31558705744278 5.88118444772291 6.66683280794505 6.64763438045793 5.96485176728749 5.21064779085677 6.41393823804328 5.83108519464482 2.34598855977339 0.259541360259409 0.257435285862052 0.26665176130275 0.263991278788867 0.273927533443285 0.266486541093003 0.262216292047439 0.258002093831296 0.265443043128152 0.257435285862052 0.257435285862052 0.257435285862052 0.257435285862052 0.264922024997896 0.260546422333125 0.264318558367398 0.279347232901101 0.267298518060846 0.261250873724882 5 5 - 3546642 3547755 3547245.818 3546287 3548112 - gene protein_coding_gene TRUE TRUE AT5G11150.1 ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 713 (AtVAMP713) (VAMP713) [Arabidopsis Thaliana] (GB:Q9LFP1); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Lon (GB:ABE77680.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 3.14271056934254 19.6990195278855 1.11262728869339e-09 6.07777067343898e-07 19.5133147569287 11.6744352638249 3.14271056934254 0.225108865568233 AT5G38895_at 6.82773192602881 7.03770892127328 8.72114956275624 8.62887707790941 8.69302048267264 8.6222751842005 6.0707330886664 6.26423782170489 5.25619177674616 5.44760020911137 6.18791713736999 6.12292461937651 6.97462552412615 6.41488332941793 6.26680870855025 6.69440270799612 7.52332395860162 7.15241750409428 5.50652007595613 0.210251182961768 0.205228561198862 0.214231270971663 0.217175718513174 0.217796564114252 0.218732231637022 0.201676779056212 0.200429752927342 0.210183409939348 0.20545457187278 0.204426388172512 0.208070476305444 0.200429752927342 0.208082474815031 0.201094748289935 0.200429752927342 0.202112690853176 0.20560296698598 0.212054263544073 5 5|0 +|/ 15589386 15590218 15589634.889 15588733 15590756 + gene protein_coding_gene TRUE TRUE AT5G38895.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02290.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96894.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.68997660986004 19.6839814816321 1.12143254057600e-09 6.07777067343898e-07 19.5081923459786 13.6435169032163 1.68997660986004 0.0533540548041507 AT5G26340_at 11.0999587840349 11.1990532338906 12.0831563793466 12.0678823553370 12.008006796417 11.5762986216021 9.48311269385755 9.13233564676455 5.35155217056042 6.52421477343915 7.51617666521161 6.44048964817836 9.03123480002596 8.74988151167545 6.07318694399801 7.96390824341378 9.62542496726219 8.73676035522769 5.57955571565643 0.213643457729148 0.214951440570129 0.219597963794139 0.21773369529438 0.218338880682831 0.223210026975549 0.216249838570278 0.213643457729148 0.266912983587168 0.23036641721435 0.219771800426430 0.247815495137554 0.213643457729148 0.222098667328524 0.250309913745353 0.224716805165297 0.231277316815228 0.220824257292449 0.244818626327426 5 5 - 9244008 9244406 9244224.091 9243514 9247069 - gene protein_coding_gene TRUE TRUE AT5G26340.1 MSS1 (SUGAR TRANSPORT PROTEIN 13); carbohydrate transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose transporter/ sugar porter Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Identical to Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1) (STP13) [Arabidopsis Thaliana] (GB:Q94AZ2;GB:O81501); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT4G02050.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91703.1); similar to hexose transporter [Vitis vinifera] (GB:AAT09979.1); similar to hexose transporter [Solanum lycopersicum] (GB:CAB52689.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829) 1.95195647693046 19.6061308422742 1.16825029979230e-09 6.2533397454643e-07 19.4815652016014 17.9990124531193 1.95195647693046 0.0978133206018003 AT5G46230_at 6.76367116624603 7.15706290567061 8.73832574333472 8.92690154144225 6.34472909689226 6.67633331903099 3.33705203459912 3.56359796000568 3.15443185213909 2.35663690102748 4.60922794438910 3.77363034707702 3.3255915664629 4.41506502846704 3.75385261461026 3.76566942097896 4.05654870639041 4.66570768801354 2.19515087351337 0.246639617195945 0.250861504939350 0.249601478000113 0.238109438257958 0.246219987746529 0.254881750556589 0.242724331943959 0.251295853567182 0.252676811360186 0.247711052319564 0.238109438257958 0.254879211525946 0.240937044368781 0.242446831809028 0.246635518498077 0.238109438257958 0.254511252394421 0.242825796123102 0.257870228618964 5 5 - 18759850 18760126 18759978.818 18759667 18760272 - gene protein_coding_gene TRUE TRUE AT5G46230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09310.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC10818.1); similar to Os07g0119800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058773.1); similar to Os01g0210600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042369.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.97157409876668 19.4494692481064 1.26906727485321e-09 6.71014546705594e-07 19.4274243216603 9.74565999095702 1.97157409876668 0.102614602478845 AT5G06690_at 8.84915603322854 8.69957872953527 9.14042656411755 8.93811321161258 9.8282260307056 9.50895957213715 7.04446698461003 6.73626362171877 6.83519593207715 6.96877469519652 9.53173858020628 8.8843483335617 9.19386364382246 9.36451844776598 9.20941335787506 8.82871999653747 9.1455323258544 8.67167092745297 6.88448876664609 0.145124370478666 0.143118464551933 0.148946045288472 0.140852594487630 0.147806308767218 0.155187135960789 0.145293852558006 0.164541696385559 0.157380412695435 0.154286513375915 0.148814303292199 0.148282155618640 0.145672792630364 0.146596308100985 0.144847711224517 0.144109267748748 0.149088212402309 0.142651348024594 0.150049745843701 5 5|0 -|/ 2060993 2061854 2061652.333 2060504 2061957 - gene protein_coding_gene TRUE TRUE AT5G06690.1|AT5G06690.2 (THIOREDOXIN-LIKE 5); thiol-disulfide exchange intermediate Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335)|Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.86456878634901 19.3961499580115 1.30551680695038e-09 6.81970387616298e-07 19.4088257757977 16.5930882599287 1.86456878634901 0.0882789898491216 AT5G23660_at 8.50670596522994 8.80559662080488 9.86177907016534 9.56709969126786 10.1315390294118 9.59703248288594 3.93824640696829 3.99850660774579 2.5666607173508 2.60110251849429 2.35614151915395 2.96929819620556 3.96064068553782 3.31972862292314 3.00491104751657 3.60698407690554 4.75020824723267 2.54904222592188 2.75285105975272 0.366836010266070 0.37120534124756 0.367514204106103 0.376401278569965 0.377486241635568 0.366042644679923 0.341309861572397 0.343566743785449 0.341371107595358 0.342485688187587 0.347484904929828 0.335520295889046 0.343528919322484 0.33513863302126 0.338478151009697 0.335832588993792 0.34379400681101 0.33513863302126 0.339325857309703 5 5|0 -|/ 7972010 7973198 7972571 7971654 7973928 - gene protein_coding_gene TRUE TRUE AT5G23660.1 MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) homolog of the Medicago nodulin MTN3 similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G48740.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); similar to Os11g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067955.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 2.07575661536043 19.3019058079679 1.37277111598522e-09 7.08565477695985e-07 19.3757362032841 11.0282252807469 2.07575661536043 0.118070988034857 AT5G18470_at 7.53441389859938 8.52812395516305 10.1946066351717 10.1539527465377 8.97377319989547 8.83374156216936 1.35956117320991 0.68128922488573 4.18751442960408 1.53146926658725 2.52282346671525 4.95073413220012 2.52829769262592 3.56073429446538 2.56551776560573 3.13329718919301 2.38340273730737 2.98903319889725 1.06732235673665 0.257482340353049 0.251068445121788 0.246700921847535 0.255573569172927 0.246700921847535 0.246700921847535 0.247113813916389 0.250536688454564 0.271865349695544 0.246700921847535 0.246700921847535 0.255135137681517 0.254219576278132 0.252983294172127 0.247766712804645 0.246700921847535 0.253521319764916 0.249841861315191 0.253548594817361 5 5 + 6128766 6129136 6128926.364 6127799 6129287 + gene protein_coding_gene TRUE TRUE AT5G18470.1 curculin-like (mannose-binding) lectin family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67520.1); similar to Receptor protein kinase, putative [Solanum bulbocastanum] (GB:ABG29323.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 2.91514975748132 19.2538510967969 1.40851283125901e-09 7.18460711990781e-07 19.3587570805606 9.7030988380885 2.91514975748132 0.209730123413739 AT5G64530_at 3.36949863425196 3.52809248962676 6.63322191241758 7.21292313769921 5.26450252211751 5.5614619048006 4.51145413979843 4.33689304748601 2.54441175819629 3.73756096123161 5.46947942885633 4.82851137927202 5.20954360626857 5.90556911255164 3.70648392819416 4.52033756761427 5.24711203641523 4.76941785001992 2.82611548618455 0.251576284716282 0.250177200576885 0.270683432440235 0.273545102571094 0.253941827283570 0.258717400265884 0.254077424952691 0.252868479055156 0.271538654242012 0.258421947487714 0.252289768566481 0.251069108150338 0.254918334057429 0.259704683439112 0.254477330080781 0.253049648845422 0.253962623596394 0.254074981560978 0.256090103567678 5 5|0 +|/ 25812622 25813854 25813303.6 25812459 25814164 + gene protein_coding_gene TRUE TRUE AT5G64530.1 ANAC104/XND1 (Arabidopsis NAC domain containing protein 104); transcription factor similar to ANAC025 (Arabidopsis NAC domain containing protein 25), transcription factor [Arabidopsis thaliana] (TAIR:AT1G61110.1); similar to Os02g0555300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047122.1); similar to H0315A08.3 [Oryza sativa (indica cultivar-group)] (GB:CAH67573.1); similar to OSJNBa0006B20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAD40817.2); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 2.07628512662307 19.1725144559847 1.47134648926868e-09 7.41784319309142e-07 19.329852648165 9.04879910628467 2.07628512662307 0.119878548260483 AT5G55560_at 4.74050080800884 4.91239918259658 7.08151349572831 7.17089290163192 6.16393930867323 6.37190039168607 3.10942910891721 3.23663327562313 1.92433264948220 2.46293490482890 2.47190587574301 2.57241868526628 3.08614424137109 2.76999169366988 2.15799701828686 2.93942667705911 3.63989362647583 2.70319013850266 2.25750781428703 0.235836429505019 0.225038295713718 0.229666508209172 0.223723077774261 0.223904671246856 0.236814683308084 0.221346023529351 0.233072275864417 0.242663058292621 0.225442415243415 0.223045126063844 0.224840803381214 0.227491538821289 0.223077753139224 0.230672094783016 0.222239182877510 0.236418150669927 0.231390996548996 0.225469049749656 5 5|0 -|/ 22523774 22524329 22524047.2 22523528 22525105 - gene protein_coding_gene TRUE TRUE AT5G55560.1 protein kinase family protein similar to WNK3 (Arabidopsis WNK kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT3G48260.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81462.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.63750840116212 19.044901361171 1.57618546774791e-09 7.85505461201186e-07 19.2840789273497 7.8521741178146 1.63750840116212 0.0538882446209885 AT5G10160_at 4.64658927338317 4.90216683526464 5.67213383988701 5.27500354887861 6.45712067152491 6.58575562109095 5.25136589434146 5.28844206496757 4.78207575486534 4.87749840795299 7.6984728526271 7.90899468769057 6.41243712931673 7.66914558740339 8.12225412678647 6.83811889666964 6.43337874467452 7.38211114435129 4.36015945860571 0.272140739650158 0.266964765683602 0.280794999232995 0.262991014057846 0.259986136805666 0.268076379743982 0.263184077946685 0.258051516443122 0.271128241322820 0.268701104947429 0.262701594404445 0.261725982995666 0.266817249416378 0.260823765951933 0.27238245843097 0.258666942225785 0.265792865114497 0.260710368226042 0.263775077003661 5 5|0 +|/ 3185922 3187124 3186258.5 3185747 3187313 + gene protein_coding_gene TRUE TRUE AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] (TAIR:AT2G22230.1); similar to 4D11_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67531.1); similar to putative 3-keto-acyl-ACP dehydratase [Brassica napus] (GB:AAK60545.1); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; (InterPro:IPR010084); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (InterPro:IPR013114) 1.80511600453572 19.0033557927833 1.61205563141114e-09 7.94252325894e-07 19.2690640836941 11.5005015619996 1.80511600453572 0.0849474475226605 AT5G50335_at 4.1342559343773 4.25885732334265 1.62587810855691 1.99738495871531 3.08845156373526 3.33774596639003 2.34337945077927 2.35309653609196 2.27690960721141 2.23204962818909 8.38456772384885 8.05533137841342 6.7651861066533 7.47650488087283 8.38875737156864 7.76406462366446 5.87431463317461 7.414538086716 5.15553666295644 0.385021931238336 0.385021931238336 0.410491452470062 0.398875532746706 0.385021931238336 0.387876790744235 0.387266676238607 0.395283662523876 0.413074563051739 0.393069164938430 0.391213948767404 0.393255311044404 0.390589192398926 0.385021931238336 0.400721408338959 0.394749180161788 0.385021931238336 0.392146784470391 0.385021931238336 5 5 - 20506665 20506770 20506695.273 20506320 20506953 - gene protein_coding_gene TRUE TRUE AT5G50335.1 unknown protein 1.76693865301497 18.9023124161228 1.70307225523172e-09 8.29667751292423e-07 19.2323127878595 8.26083459694842 1.76693865301497 0.0803884954661222 AT5G11960_at 7.44394227544427 7.50083194099692 8.9189983676642 8.92939704995533 9.12280299931317 8.81811014057934 7.29534113316438 7.29175402412559 6.32742299961837 5.96787377249035 8.05347487639895 7.85498185204882 8.28540128958438 7.96399251714482 7.5408112593007 7.958510084591 7.95087197262794 7.78996955268782 6.4373681477227 0.204009015543761 0.203185983351918 0.197674746318085 0.197803431203439 0.196476891868675 0.200065563369171 0.202321263222565 0.193058565163324 0.20599908152462 0.199920981766149 0.19720874004538 0.19716065456306 0.193058565163324 0.202373658401871 0.203748402545761 0.205312804889466 0.208067143908957 0.202981091658293 0.203242268310243 5 5 - 3859266 3860647 3859914.3 3858580 3861516 - gene protein_coding_gene TRUE TRUE AT5G11960.1 similar to permease-related [Arabidopsis thaliana] (TAIR:AT4G13800.1); similar to hypothetical protein MtrDRAFT_AC152551g11v1 [Medicago truncatula] (GB:ABE86250.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 1.62244491577474 18.8808605680759 1.72310878585003e-09 8.30101750661433e-07 19.224467512467 15.2496338991513 1.62244491577474 0.0536735036999231 AT5G23240_at 10.3263487363755 10.4141743821381 10.7481024499747 10.8518541016728 11.1075902997239 10.4566499289415 6.79094818540484 6.57607253410931 4.6027027151582 6.32034968833217 6.17458125666081 5.01555381725047 6.81466358449345 7.84384948232082 5.66891590441852 6.41779564042635 8.09237558291799 6.78609786368732 3.40641268998929 0.281688193575402 0.282953333443173 0.284156946991344 0.285790502715331 0.284038656652333 0.283677108993057 0.28055737012449 0.280259470188631 0.293208042103726 0.276276833281342 0.275647942466613 0.282746646791553 0.279590113994139 0.290047318599971 0.277381228808679 0.281008649799713 0.280842290272736 0.281212338300946 0.28545882390339 5 5 - 7826897 7827432 7827131.364 7826735 7828727 - gene protein_coding_gene TRUE TRUE AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42750.1); similar to H0103C06.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86103.1); similar to Os04g0675400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054247.1); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 2.04470200630001 18.8037875153054 1.79724866030342e-09 8.56303893319794e-07 19.1961559561398 15.3480763303002 2.04470200630001 0.1209369412439 AT5G06560_at 7.04471151727795 7.34962958398554 8.37943876950716 8.61907917905825 8.99040154963131 8.91440419190516 6.45991160162328 6.11485633337896 6.86363248097889 5.79128779769219 8.20719730560175 8.2559912950821 8.05669474570448 8.16140497325702 7.59623887442842 8.13941693200425 7.81797128524026 7.92817078856279 6.4408715215578 0.215182116977851 0.215963599312598 0.208270502894419 0.211452062366376 0.213610692183196 0.21373462629836 0.204936324066883 0.212152672400495 0.222836975224354 0.221712651749211 0.21431749048455 0.206778112709442 0.205003627569544 0.216106845276964 0.207785828076706 0.207489460828888 0.217315571215359 0.222706453891166 0.221785695244272 5 5 - 2003683 2004546 2004209.182 2003305 2006189 - gene protein_coding_gene TRUE TRUE AT5G06560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11850.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA98276.1); similar to Os11g0575900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068136.1); similar to Os03g0650800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050787.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 1.81933775251727 18.7539085664948 1.84708220444855e-09 8.70481487037562e-07 19.1777291350758 14.9268789449933 1.81933775251727 0.0907904356786887 AT5G66320_at 5.86414951209258 5.94943786279547 6.7622322745188 7.29079261931309 6.76125142054579 7.04218002439072 3.18624916530518 3.582073580692 3.71764568430813 3.26882976292002 5.25220677314023 6.27095794286428 4.97124526625610 5.5172976785493 5.56676712097437 5.21827719833104 5.11728406352343 4.22417712105531 3.3959872861292 0.255242068132553 0.247312811019881 0.260314946932023 0.247062676344324 0.246477215961402 0.258292880338710 0.247997037079026 0.244170427594496 0.250551600953557 0.247016928481253 0.242934573270993 0.245434069873628 0.249606678943643 0.248709362613725 0.245990958201652 0.243543884750489 0.257365404345139 0.248730906634326 0.251706919553836 5 5 - 26513454 26513996 26513730.273 26513181 26515075 - gene protein_coding_gene TRUE TRUE AT5G66320.1|AT5G66320.2 zinc finger (GATA type) family protein Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. Identical to GATA transcription factor 14 [Arabidopsis Thaliana] (GB:Q9FH57); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G51080.1); similar to hypothetical protein [Thellun (GB:ABB45844.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 2.06254614446922 18.6675589772059 1.93695781533743e-09 9.0104079178557e-07 19.1456331252351 10.1688445858096 2.06254614446922 0.125060942175314 AT5G25570_at 1.64371210778434 1.62926433120808 2.82154774143932 2.90991669612663 3.24627094322631 3.46085472084098 1.59562632956873 1.42794701871314 1.12439678344887 1.19444589386679 3.11366826788287 2.91111252408595 3.04302420241082 3.03323670450764 2.73227788516955 2.79000013683961 2.63062830456227 2.65997463246287 1.36754093675382 0.215608152366038 0.215443960629013 0.217150898873726 0.217482918601318 0.216520495351969 0.224172910742458 0.218208228164549 0.221901205044079 0.217246928261353 0.222978128565549 0.221185840691864 0.220648278780037 0.215455997853740 0.215443960629013 0.225800959468866 0.22539634336444 0.229761477611597 0.220484749645951 0.218432571949224 5 5|0 +|/ 8901835 8902868 8902266.111 8901744 8903219 + gene protein_coding_gene TRUE TRUE AT5G25570.1|AT5G25570.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83630.1) 1.58547793640339 18.6521524620822 1.95348987209231e-09 9.0104079178557e-07 19.1398803058442 4.38840992124512 1.58547793640339 0.0496097828265787 AT5G18120_at 8.2702594688607 8.58404744500917 9.57441003989608 9.5101150046097 9.8660567630253 9.68781104610905 8.0796786888649 8.06747627907191 7.41451834388809 7.2860722199313 9.26739484760213 8.88364366232624 9.28141540899587 9.34143896647102 8.83935471784668 9.36473407176852 8.98224692729676 9.03158710651803 7.05461359545597 0.16031797105224 0.148554390445493 0.151489461025174 0.151051628538919 0.161498933723645 0.159324274149710 0.161936674865626 0.158412641484052 0.164325896020392 0.166196736327131 0.154321628019966 0.151573684913857 0.154602781434864 0.158063371355204 0.153926758198416 0.148554390445493 0.164191283724339 0.148985962781678 0.188084739145966 5 5|0 +|/ 5992475 5993645 5993320.556 5990958 5993938 + gene protein_coding_gene TRUE TRUE AT5G18120.1 ATAPRL7 (APR-LIKE 7) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. similar to ATAPRL5 (APR-LIKE 5), electron carrier/ protein disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G03860.1); similar to Thioredoxin domain 2; Thioredoxin fold [Medicago truncatula] (GB:ABE86406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.64073749340153 18.5563618978604 2.05979970525642e-09 9.30282606457958e-07 19.1039323507891 17.1428376836117 1.64073749340153 0.0634705387965578 AT5G39090_at 5.39683065505886 6.07778378607453 8.58833239958654 8.79464980307824 7.26892093358918 7.41989118609653 5.07973883664096 5.38311184940245 4.11690076682698 4.48915643830890 5.64161891020865 5.24415609646227 6.50652792669284 6.39808793794051 5.6834324843104 7.09961029357349 7.0112048049456 6.11746503743587 4.82112073400613 0.228949650107037 0.226444960125736 0.238468375078796 0.239458759965796 0.227088338492590 0.239268559035547 0.244537711203675 0.232790403184209 0.259651725437499 0.23940982267227 0.229032652845178 0.227664604704345 0.231427366834374 0.232043548953358 0.231429225637957 0.226444960125736 0.242483250058473 0.228684144034179 0.242649176509174 5 5 + 15661612 15662109 15661831.818 15660831 15662344 + gene protein_coding_gene TRUE TRUE AT5G39090.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 2.13530962776281 18.4969154803611 2.12894097340152e-09 9.51596921873427e-07 19.0814669286030 12.0954018892710 2.13530962776281 0.136383241958341 AT5G23550_at 6.0609017415132 5.94118677740865 7.42382457080121 7.06549172498853 7.72764777391789 7.47062231921314 6.38160306532988 6.10359298799818 3.89237821184538 4.14563000591027 6.89747472666048 6.36886112565307 6.65567097394118 6.30264429046539 6.57507566868519 6.39325610972432 6.32227476855853 6.23416289519082 4.46110859379555 0.259157601234925 0.259157601234925 0.259157601234925 0.271154686581566 0.259157601234925 0.276626217016691 0.262180286337789 0.267491158403797 0.279129431202793 0.271484237086008 0.266591893561603 0.261577850459151 0.260794748224130 0.271904423263786 0.260104380575853 0.259157601234925 0.269430432338779 0.27812780036074 0.273750360689155 5 5|0 -|/ 7939960 7941373 7940475.778 7939614 7941631 - gene protein_coding_gene TRUE TRUE AT5G23550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24170.1); similar to PREDICTED: similar to SFT2 domain containing 2 [Bos taurus] (GB:XP_583469.1); similar to Os02g0564500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047161.1); similar to SFT2 domain containing 2 [Mus musculus] (GB:NP_663487.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 1.80119037675526 18.4469058557614 2.18907092951432e-09 9.68489463696524e-07 19.0624741912521 12.0893837903348 1.80119037675526 0.0925617272581081 AT5G25840_at 8.82165657227367 9.00168306033863 8.8777997706476 8.93072869608673 9.75356495150306 9.85644873880767 7.31683369579075 6.9912391685367 7.34733122836726 6.36626048640242 9.28153922081568 9.49023965050025 8.57419304171377 8.48263028432601 9.00926252360478 9.1753502025375 8.74172118709533 8.82161284487123 7.21185537210973 0.181550761603442 0.178124283720183 0.174724075703359 0.174724075703359 0.182453775596144 0.178074622873760 0.181681534007670 0.184170817861199 0.185220344116009 0.206758424884907 0.179484772303788 0.179601312624644 0.179559857911704 0.180556965580009 0.184846569012573 0.181604133518966 0.180664282065397 0.176550471949201 0.193990103591417 5 5 - 9010940 9011399 9011152.818 9010727 9011501 - gene protein_coding_gene TRUE TRUE AT5G25840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79770.1); similar to Os06g0554200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057846.1); similar to Os01g0199700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042311.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26169.1); contains InterPro domain Protein of unknown function DUF1677, plant; (InterPro:IPR012876) 1.64685100274980 18.3966073209252 2.25142359211264e-09 9.8601417953011e-07 19.0432849693046 16.6548531559445 1.64685100274980 0.0674264759745734 AT5G08600_at 2.60833965931544 2.08363317270771 4.12916132334882 4.16641248167407 4.65270734105353 4.73443053920996 2.74160322265758 2.82509364636784 2.43309277045389 2.68805264599512 4.42155821496838 4.21834213981835 4.27186922604139 4.06893722057149 4.57652684200689 4.05523152998751 4.47227412149225 3.80904919085895 2.37936027580104 0.255745721793705 0.238663634202207 0.234659881789939 0.239033865652448 0.239901097539669 0.242138816232019 0.235311322547859 0.234659881789939 0.245130665260595 0.244219715410405 0.23600102580722 0.235132056393066 0.242554036408310 0.237923442209623 0.237687145389873 0.242067831704034 0.241000511363347 0.236273904117977 0.236452594832701 5 5 + 2789030 2789674 2789391.091 2786268 2789872 + gene protein_coding_gene TRUE TRUE AT5G08600.1 U3 ribonucleoprotein (Utp) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02400.1); similar to hypothetical protein DEHA0A03355g [Debaryomyces hansenii CBS767] (GB:XP_456468.1); similar to Os03g0343300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050076.1); contains InterPro domain Utp14 protein; (InterPro:IPR006709) 1.79628274634713 18.3502004224755 2.31067483280823e-09 1.00084628832453e-06 19.0255028393893 6.86111873569262 1.79628274634713 0.0932496313010742 AT5G14920_at 9.20281375688979 9.37506536012431 6.3387187338431 6.40243529989587 9.10502929252138 9.19037150076759 4.00329702421465 4.61989709825636 5.93741812759118 6.29494345558293 9.69839445103877 10.0228178971079 9.14872834722161 9.48203024121853 10.3516169953151 9.03838107533668 8.38840448511396 10.2135289677258 7.70237152598884 0.175173039788445 0.173638271123923 0.182012685205952 0.191049069282616 0.175422528288188 0.179977888632147 0.193864495034699 0.202650359211634 0.189088604795485 0.191594298788923 0.179854914906412 0.178192179497137 0.173638271123923 0.178137660689400 0.177151162643964 0.180877121321064 0.180299367042305 0.177253669845837 0.1943232949644 5 5|0 +|/ 4827088 4827721 4827517 4826482 4827983 + gene protein_coding_gene TRUE TRUE AT5G14920.1|AT5G14920.2 gibberellin-regulated family protein|structural constituent of cell wall similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854)|similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882) 1.92847358400393 18.3342295728821 2.33145809686915e-09 1.00084628832453e-06 19.0193658554747 15.3736529302628 1.92847358400393 0.112313591320107 AT5G47880_at 7.68006870404752 7.72200552679477 9.34093220951017 9.42381259814596 9.44000913559088 9.07275498501991 8.36073139686576 8.23948963378597 6.0313599643264 7.16424257731517 8.45868595907441 8.44879225466626 8.75192345663547 8.5660083232793 8.4830539775727 8.80828267680363 8.85941391010284 8.03475403260206 6.55546134803669 0.166641598349326 0.162216981632846 0.167025534004905 0.166356685434261 0.163658984118273 0.174958485950619 0.163268715824844 0.163692224720801 0.177599282833830 0.171550038646414 0.170130621533318 0.169005927810831 0.167636349121917 0.160623458130889 0.165351433792432 0.160623458130889 0.169017508835204 0.182399721202978 0.176900644799143 5 5 - 19403812 19404351 19404037.182 19403326 19405788 - gene protein_coding_gene TRUE TRUE AT5G47880.1|AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones. Identical to Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to eukaryotic release factor 1 homolog (GB:AAA91169.1); similar to eukaryotic peptide chain release factor subunit 1-3-like protein [Solanum tuberosum] (GB:ABC01885.1); similar to eukaryotic peptide chain release factor subunit 1-3-like [Solanum tuberosum] (GB:ABB87106.1); contains InterPro domain eRF1 domain 2; (InterPro:IPR005141); contains InterPro domain eRF1 domain 3; (InterPro:IPR005142); contains InterPro domain eRF1 domain 1; (InterPro:IPR005140); contains InterPro domain Peptide chain release factor eRF/aRF subunit 1; (InterPro:IPR004403) 1.64323988865461 18.2739024892114 2.41182451032724e-09 1.02519546173726e-06 18.9961041980315 16.2275016672542 1.64323988865461 0.0688320508426703 AT5G07340_at 7.70436357785041 7.55493876673199 8.83016241096787 8.9293900172274 8.62066208258488 8.44460854166234 5.78485358103448 5.43990864853147 5.4290473245609 5.48001620940258 6.64722685820014 6.6594773886858 6.73573496377173 6.50309442107086 6.93612050084606 6.02601154944916 6.20588095576986 5.96826445565247 4.74922680089164 0.263164151805524 0.259781572636987 0.259627652390636 0.267758646039140 0.259627652390636 0.259627652390636 0.263865968657277 0.261845479502846 0.270099902758002 0.270863689176365 0.259744284074985 0.259879017184073 0.262333671023452 0.259764177399916 0.259627652390636 0.259627652390636 0.272616726824104 0.259627652390636 0.272804738534879 5 5 + 2318621 2319415 2318985.545 2317214 2319650 + gene protein_coding_gene TRUE TRUE AT5G07340.1 calnexin, putative Identical to Calnexin homolog 2 precursor [Arabidopsis Thaliana] (GB:Q38798;GB:Q9LY26); similar to calnexin 1 (CNX1) [Arabidopsis thaliana] (TAIR:AT5G61790.1); similar to calnexin homolog (GB:AAA17742.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE80216.1); similar to putative papillar cell-specific calnexin [Brassica napus] (GB:AAK84429.1); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580) 1.66299294731796 18.1910503874113 2.52716820700553e-09 1.06188637121695e-06 18.9639489501987 13.5034392024734 1.66299294731796 0.0738592252467508 AT5G54860_at 6.97533113727339 7.21896949303622 8.47499579687067 8.60165299171545 6.76651668125757 6.40920730862772 3.95671516258128 3.63912129424491 4.56776521029005 2.91908224706350 5.30527780996386 5.71085720297192 4.28919229109965 5.0799323698322 5.01689438738387 4.37155641076217 4.54756705561912 5.49931581555780 3.04010771532351 0.231263899080984 0.235596962692804 0.243428119221824 0.238748440708856 0.232906934566450 0.250000712290591 0.229052220431777 0.230017499895270 0.246070053511171 0.234137432044665 0.237795269646504 0.233665037290518 0.233156487452256 0.238693554316715 0.252453875749648 0.22875658562672 0.242995867770654 0.234798464166371 0.22875658562672 5 5|0 +|/ 22303509 22304184 22303820.4 22301807 22304432 + gene protein_coding_gene TRUE TRUE AT5G54860.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G64890.1); similar to Biopterin transport-related protein BT1 [Crocosphaera watsonii WH 8501] (GB:ZP_00518975.1); similar to Os01g0243200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042562.1); similar to Os03g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051544.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 1.79207401658686 18.1620419455097 2.56896512294448e-09 1.06188637121695e-06 18.9526333601331 10.7485933459298 1.79207401658686 0.0954059553215764 AT5G03350_at 12.4361123386074 12.7850525013316 12.7188714540432 12.826275394014 12.0058608892135 11.7809447186778 8.43749090779501 8.87508397735107 10.2732547357703 6.67487340391281 10.3487359270329 12.1004229189709 8.28386281204416 10.5634514499325 9.94025070329302 9.74898613485188 9.27592570094672 11.2328477000422 7.52197352967188 0.141855432257049 0.139400716927164 0.142351384830882 0.143462159602713 0.138037036202094 0.139739827850526 0.150148601129060 0.156865022294691 0.14595845863977 0.203054182883286 0.145505955401988 0.141493146918283 0.151223568752337 0.138037036202094 0.144494593112996 0.143550544312033 0.149841744099076 0.138037036202094 0.176782640713797 5 5 - 815813 816278 816046.545 815673 816657 - gene protein_coding_gene TRUE TRUE AT5G03350.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16530.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 1.86483152232674 18.1602192124799 2.57161649972884e-09 1.06188637121695e-06 18.9519213534680 20.6549670100497 1.86483152232674 0.106026148386629 AT5G23870_at 6.46438134006174 6.32802634984668 7.39201708315003 7.38570452517857 9.2036170814985 8.45313435995349 6.49395616266083 6.02742993970726 6.76221025253645 5.55673325331307 9.43857665805474 8.23444426813334 8.74554312942367 9.04277475928632 8.16624190713758 8.7285315120457 8.70200218535676 8.66358793971253 5.70261928692996 0.246404413682714 0.240693608251990 0.240186995021317 0.250748276236462 0.231678273670189 0.242019576912972 0.231898276955947 0.239978920708955 0.256360141509673 0.246760361786418 0.228660183336665 0.226647242037921 0.231447472635239 0.231987166778994 0.228826983292716 0.226647242037921 0.239506712175738 0.226647242037921 0.238350001289331 5 5|0 -|/ 8046333 8047278 8046811.25 8045847 8050178 - gene protein_coding_gene TRUE TRUE AT5G23870.1|AT5G23870.2|AT5G23870.3 pectinacetylesterase family protein similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62060.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34281.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 2.24409750583834 18.1148767566900 2.63854338169842e-09 1.07924368503894e-06 18.9341713917107 14.5797335515006 2.24409750583834 0.154736763902295 AT5G63880_at 7.12058010658604 7.47297044772221 8.64512672600989 8.27919765544594 8.77305983509725 8.47804988154539 5.91850875102101 5.49121796314972 5.25697280307328 5.35603880189023 7.4622524581539 7.12626618360175 7.23192767025962 7.52469402389324 7.12492396099483 6.89372525412794 7.31455475267566 7.22253899361877 5.25897624878135 0.217512426957542 0.215580423782023 0.22540529796152 0.228757513507062 0.223899840453773 0.220473408612932 0.216746227366966 0.226119629238186 0.223150333041728 0.221186307948325 0.218404831861249 0.214965012630969 0.220806893660076 0.215588278869617 0.217716100435415 0.214965012630969 0.232840989565013 0.225290981437731 0.237046640473752 5 5 + 25581759 25582457 25582149.182 25580964 25582724 + gene protein_coding_gene TRUE TRUE AT5G63880.1 SNF7 family protein similar to SNF7-related [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) (GB:Q503V0); similar to Os02g0596500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047322.1); similar to hypothetical protein LOC445397 [Danio rerio] (GB:NP_001003874.1); contains InterPro domain Snf7; (InterPro:IPR005024) 1.99499350082782 18.0107539407874 2.79954280737916e-09 1.13439545365099e-06 18.8931327266600 13.7864754358625 1.99499350082782 0.125711001490836 AT5G42570_at 6.60375156753991 6.65844778839356 7.51745508520482 7.92452233779392 7.25122829769997 7.2163864359827 5.7917073965611 5.87801524493188 4.37899255861702 4.43761922672660 6.0673322614924 6.858366515683 6.1408769108755 6.19689584767431 6.4450650085085 6.6665219361508 6.47847501701675 6.5373684768385 4.36789122724656 0.237284952451755 0.232959890393164 0.247811142455320 0.23560072734753 0.232959890393164 0.248321723883545 0.236999752382343 0.246123927410260 0.272898221304182 0.239621704969544 0.239407436712068 0.232959890393164 0.235902516282819 0.241884032329314 0.242649530710604 0.232959890393164 0.249225938514822 0.245438900494917 0.242644495690423 5 5|0 -|/ 17039029 17039636 17039492.7 17038538 17039811 - gene protein_coding_gene TRUE TRUE AT5G42570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48660.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69146.1); similar to Os02g0321800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046689.1); similar to Os05g0272900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055067.1); contains InterPro domain B-cell receptor-associated 31-like; (InterPro:IPR008417) 1.63672297453183 17.9621521399865 2.87833850913199e-09 1.14492361347635e-06 18.8738432466196 12.2645378114185 1.63672297453183 0.0728801435493822 AT5G16910_at 7.49533040692432 7.57954769547912 8.70107794049103 8.66790337057954 8.9338454122198 8.77533398808453 6.26840826023713 6.30231905799168 4.9824665398067 5.1103370737879 5.8238714482509 6.03398992385418 6.58051029984828 6.17434347538066 4.87742362702326 6.60534660633307 7.06111667118212 5.66071767699576 4.99009373092678 0.240605125075634 0.243332545132774 0.244397714707419 0.247418939169379 0.249353794744071 0.256435345912801 0.24852096063587 0.254989635182867 0.279050991219524 0.239793330972494 0.239793330972494 0.242861900105414 0.244553159041349 0.244826220254862 0.24881345164694 0.24150148583675 0.24563544354882 0.254689537043615 0.243436472741180 5 5 + 5564695 5565238 5565013.909 5561682 5565583 + gene protein_coding_gene TRUE TRUE AT5G16910.1 ATCSLD2 (Cellulose synthase-like D2); cellulose synthase/ transferase, transferring glycosyl groups encodes a gene similar to cellulose synthase similar to ATCSLD4 (Cellulose synthase-like D4), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G38190.1); similar to ATCSLD5 (Cellulose synthase-like D5), cellulose synthase [Arabidopsis thaliana] (TAIR:AT1G02730.1); similar to CSLD3 (CELLULOSE SYNTHASE-LIKE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G03050.1); similar to cellulose synthase-like protein D4 [Populus tremuloides] (GB:AAO03579.1); similar to putative cellulose synthase [Oryza sativa (japonica cultivar-group)] (GB:AAL58185.1); similar to cellulose synthase D-like protein [Nicotiana alata] (GB:AAK49455.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150) 1.4663356703102 17.933902824772 2.92524804741486e-09 1.15300490638395e-06 18.8625920565844 13.4053694736421 1.4663356703102 0.0321289942397680 AT5G37780_at 10.8871914291371 10.7973810651206 11.7127477157996 11.6310204247696 11.8506909964215 11.4754088069106 9.61750073330116 9.36946189413475 8.58802592982475 8.68818664469687 10.6240155060483 10.5376457101363 10.5249830265404 10.3522642244291 10.7653543752602 10.237254657367 10.3225172464649 10.3656288752919 8.57621535883511 0.106179531531653 0.103816921951435 0.103816921951435 0.105215984300255 0.105295285367402 0.11362044584936 0.106111395716126 0.108096802632252 0.131323750706815 0.122885700168820 0.103816921951435 0.103816921951435 0.108543023925430 0.108896459178490 0.105033570098545 0.105435898391698 0.107549134856021 0.106338548118295 0.123119888474793 5 5 - 15022055 15023322 15022428 15021757 15023435 - gene protein_coding_gene TRUE TRUE AT5G37780.1 CAM1 (CALMODULIN 1); calcium ion binding encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. Identical to Calmodulin-1/4 (CaM-1/4) (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.6741575902293 17.8944626020149 2.99214234766230e-09 1.16578390811504e-06 18.8468351059471 20.4595173484383 1.6741575902293 0.0806340474486687 AT5G05230_at 6.01667622780342 6.02905260592444 7.32686591004219 7.26880823409128 8.03286615100266 7.87075235410433 5.21353585395992 5.53285323110928 4.16747377649927 4.21200616717526 5.35965828972484 5.66949578688942 5.81533848225742 5.78219918371271 5.04718127835854 5.91786050707351 5.81614507073987 5.46748474499742 4.7643520716777 0.216153110245086 0.211329999065092 0.217799882242191 0.220557831227624 0.211329999065092 0.234395205005636 0.211908022035144 0.211329999065092 0.214444680335937 0.21587447240014 0.214243303502577 0.217104591470911 0.211941522213733 0.218221787677306 0.214614634972725 0.212969783488782 0.24307264242548 0.218562424133317 0.220588386262522 5 5|0 +|/ 1551778 1552854 1552286.8 1551389 1553806 + gene protein_coding_gene TRUE TRUE AT5G05230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40640.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO60024.1); contains domain RING/U-box (SSF57850); contains domain no description (G3D.3.30.40.10) 1.57746838106466 17.8764189450959 3.02330128530296e-09 1.16578390811504e-06 18.8396074467661 11.6567751992147 1.57746838106466 0.0628186853943593 AT5G65300_at 2.96996808309014 2.94669709287179 3.66601581223787 3.89718881097992 4.41230449357885 4.55067625790114 1.95984992074675 1.64435635491281 1.59526444680360 2.40193095782555 3.24180042265604 4.14009754231744 3.08729148564887 3.02796000728038 4.07583117758768 3.98552222312774 3.17276597338392 3.84489022328701 2.23540960805090 0.28287267513126 0.28287267513126 0.290347043468109 0.291084709479487 0.293910373570348 0.294946829397107 0.289697187123308 0.299494356479402 0.292996901363491 0.292573206424620 0.28287267513126 0.296555958062785 0.285120983425267 0.287719994641232 0.284033902459593 0.28564972541244 0.28287267513126 0.28287267513126 0.2839366400915 5 5 - 26112498 26112910 26112753.273 26112373 26112997 - gene protein_coding_gene TRUE TRUE AT5G65300.1 similar to Avr9/Cf-9 rapidly elicited protein 75 [Nicotiana tabacum] (GB:AAG43558.1) 1.62290667922676 17.8677868182979 3.03833290711218e-09 1.16578390811504e-06 18.8361455001827 6.08065954635882 1.62290667922676 0.0719094562362877 AT5G20120_at 5.95184547801597 6.1845123356066 7.4449092461532 7.33245426968827 7.99394337519387 7.87767078725545 5.71246006275375 5.6894894231982 5.75142658175733 5.76268425087888 7.12391275715227 6.86820856006825 7.28281795408311 7.27259053695372 6.80998607068821 7.18213532333497 6.70398113414615 7.17195136491266 5.89731248928843 0.174217667595514 0.166949964608821 0.171048607765479 0.172182762838828 0.168676394520582 0.166559372285528 0.164172750791095 0.166007148997335 0.176410874515920 0.175854008098594 0.161290601724371 0.168291841596763 0.161538205630694 0.168180500608572 0.164083057288181 0.161290601724371 0.177506350771275 0.167435550077249 0.167024651559763 5 5|0 +|/ 6795975 6796899 6796559.889 6795368 6797174 + gene protein_coding_gene TRUE TRUE AT5G20120.1 similar to hypothetical protein MtrDRAFT_AC157983g12v2 [Medicago truncatula] (GB:ABE86509.1) 1.51290389168581 17.8172666142986 3.12795908663608e-09 1.18964492143638e-06 18.8158292873865 13.2012884905543 1.51290389168581 0.0491995819398522 AT5G55210_at 7.46417549351786 7.53147320902137 8.77666270660262 8.8422226006844 9.06180000608147 8.8588687124994 7.83841476769075 8.08039263746845 5.42101236822608 6.71830410587264 8.27137047782574 8.13122557090758 8.69225232888752 8.0706351739593 8.1978475742223 8.74336746834554 8.44327971033732 7.77562529573924 6.98185072281214 0.200015064534454 0.197612175456113 0.1932960912198 0.199198041534607 0.192429108467185 0.208042925914027 0.200897450363289 0.203292208700290 0.241830428046041 0.199843097777283 0.197148131010408 0.193384579514285 0.196516359781384 0.204716068455844 0.198567090972986 0.192429108467185 0.214107147930881 0.199942014802284 0.196987180921656 5 5|0 -|/ 22414123 22414563 22414420.4 22413652 22414672 - gene protein_coding_gene TRUE TRUE AT5G55210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22320.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28485.1) 1.53662626530007 17.7150101133919 3.31833162385554e-09 1.25107425731706e-06 18.7744190986819 15.6389626911950 1.53662626530007 0.057019209080784 AT5G08380_at 9.51133243140973 9.44541849470122 9.8544976053933 9.82829981059328 9.32554646838955 8.83034004196411 5.81793489985683 5.85594578810337 5.63264972735547 5.52645732356322 6.521117811183 7.49505577255664 6.48582836401883 7.08402613735957 7.61735007160494 6.9180459433075 7.40803981866254 7.66667870264286 5.56301032022549 0.193844988962201 0.195188777567732 0.195789035149065 0.196856510435051 0.195959422013597 0.193844988962201 0.208263745304096 0.193844988962201 0.196740891212522 0.1990731763976 0.193953541691113 0.193844988962201 0.197775035600747 0.197491772462321 0.195636657501763 0.193844988962201 0.201060134056207 0.194248959503636 0.203581820863952 5 5|0 -|/ 2694855 2695991 2695335.75 2694678 2697725 - gene protein_coding_gene TRUE TRUE AT5G08380.1 ATAGAL1 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 1); alpha-galactosidase similar to ATAGAL2 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 2), alpha-galactosidase [Arabidopsis thaliana] (TAIR:AT5G08370.2); similar to acid alpha galactosidase 1 [Cucumis sativus] (GB:ABC55266.1); similar to alpha-galactosidase 1 [Pisum sativum] (GB:CAF34023.1); similar to alpha-galactosidase [Carica papaya] (GB:AAP04002.1); contains InterPro domain Glycoside hydrolase, family 27; (InterPro:IPR002241); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111) 1.68874589100977 17.6595540592558 3.42683659866866e-09 1.2808449186239e-06 18.7517984957829 14.9204429182423 1.68874589100977 0.086821923907834 AT5G18780_at 7.32862963500957 7.39842602754619 9.00369921373342 8.90139849010055 8.33570374992597 7.8844980101253 4.13307062579385 3.87365271540189 4.40284244164853 3.93796989136776 4.37441053023521 4.18859010618753 4.17945882049619 4.66324761578354 4.11581216766816 5.10189768386998 5.90003607100157 5.86493209213681 4.26363416626513 0.225422209223335 0.224251517930544 0.220505101227805 0.224806638304982 0.230064826471306 0.22254566235049 0.224299095891424 0.223611151773672 0.242304766018438 0.220963098154187 0.231504676552532 0.224442058576201 0.228969952080074 0.227766175006072 0.227038931560534 0.220688077116125 0.246342013171455 0.220798246115647 0.226866487537541 5 5|0 +|/ 6265448 6266054 6265737.8 6264612 6266099 + gene protein_coding_gene TRUE TRUE AT5G18780.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G18770.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.72247304226433 17.6393029976137 3.46742012101321e-09 1.28493673597757e-06 18.7435093119060 11.6073999596293 1.72247304226433 0.0925836380429297 AT5G16450_at 7.96745933565648 8.07173809472676 8.87226401251819 8.98919098962897 8.97894629810922 8.73619005926864 7.1717031378093 7.26090061416657 6.40150847485991 6.96573734748686 8.55160346322697 8.40793326498522 8.65955013233869 8.66306694936744 8.37762664744261 8.49972719015788 8.42215452760317 8.4060126427036 6.92410299899723 0.200213402946444 0.193537634233292 0.195143605209932 0.193023602568935 0.212418228872258 0.194389029534573 0.227920803230209 0.18967082500634 0.210423720624373 0.204381135576277 0.189017598499483 0.191902700528672 0.189304597408615 0.19327426368541 0.192659550114511 0.189212082035256 0.196920224224035 0.193448050031469 0.210825209769857 5 5 + 5374416 5375311 5374904.455 5373886 5375462 + gene protein_coding_gene TRUE TRUE AT5G16450.1|AT5G16450.2 dimethylmenaquinone methyltransferase family protein Identical to Regulator of ribonuclease-like protein 2 [Arabidopsis Thaliana] (GB:Q9FFE0;GB:Q8LEV6); similar to dimethylmenaquinone methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G02770.1); similar to Dimethylmenaquinone methyltransferase [Medicago truncatula] (GB:ABE89807.1); contains InterPro domain Protein of unknown function 1935; (InterPro:IPR010203); contains InterPro domain Dimethylmenaquinone methyltransferase; (InterPro:IPR005493) 1.50543697803584 17.5835196259957 3.58194937620568e-09 1.31612936403551e-06 18.7205960866469 15.8871702140736 1.50543697803584 0.0523280101166096 AT5G14940_at 8.46104936010727 9.20077895214395 10.4406553296486 10.4418129298335 10.4969018999507 10.1194960822387 8.80273502977571 8.88445801459866 6.00556405046743 6.68771959207905 8.43003444965884 8.08864615427455 8.65340647432832 8.43276672116881 8.05667771075602 8.39291765774768 8.84277953940314 8.41485523302809 4.61423802193454 0.187299677399167 0.174464693537484 0.178968803257065 0.180158543151119 0.176382742581689 0.181362263430462 0.175756997922029 0.178508252867969 0.222087178767092 0.192615090211593 0.175925409173050 0.175412586903707 0.174464693537484 0.187941209482767 0.182632872838444 0.179005942388852 0.189297701266816 0.181054610214991 0.204927122082363 5 5 - 4831835 4832323 4832107.909 4831751 4834398 - gene protein_coding_gene TRUE TRUE AT5G14940.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G01350.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE79897.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 2.09114891282342 17.5619162756137 3.62740717597137e-09 1.32163182760203e-06 18.7116908130640 16.6975781401402 2.09114891282342 0.144406314956512 AT5G57800_at 8.97741549236621 9.16006161491427 10.7252633214167 10.8450998761887 11.5820428128403 11.4235176567024 10.1550903377825 10.0266771643202 9.9784628439843 9.80652875214927 12.0177529079560 11.0180083571001 11.4280793989005 11.5150596771064 10.8300894746058 11.0166750876330 10.8941887572956 11.2034248821294 9.65046086255844 0.120176279091326 0.112661982046769 0.116256852201359 0.113497771241600 0.117479677589622 0.121278106217019 0.112580759747464 0.115486431787288 0.120215524412844 0.120760964071398 0.117763388010789 0.117088539232598 0.112580759747464 0.117401886666755 0.112791433688619 0.115973730603916 0.129410811366031 0.118732383893515 0.118453378166735 5 5|0 +|/ 23440255 23441029 23440638.7 23437435 23441278 + gene protein_coding_gene TRUE TRUE AT5G57800.1 WAX2; catalytic encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. similar to CER1 (ECERIFERUM 1) [Arabidopsis thaliana] (TAIR:AT1G02205.2); similar to lipid transfer protein (GB:AAA33934.1); similar to glossy1 protein [Zea mays] (GB:AAR90847.1); similar to Gl1 protein [Zea mays] (GB:AAR97643.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Sterol desaturase; (InterPro:IPR006088); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.49638104802572 17.5060537848418 3.74789922427924e-09 1.32693113875958e-06 18.6885810783044 20.8880096866022 1.49638104802572 0.0517258549543113 AT5G24530_at 11.2162698295896 11.3898427974131 12.4457571860851 12.4343070307261 12.0190597779844 11.7318048180434 5.77526018637826 6.07333308893632 10.9710900170588 6.98877556707921 8.04151777231186 8.97499591242936 8.7749617818221 8.88091401558218 7.6663149120523 9.35424537355855 8.18664462694043 8.73539043170927 8.68003190010403 0.240681807686677 0.239726316555933 0.240102577708059 0.239726316555933 0.240798767270298 0.24052630008553 0.272016576248225 0.260669450081871 0.244333261992307 0.250172683506601 0.248989707999346 0.239726316555933 0.240652391441181 0.246359074669979 0.239726316555933 0.242584643989465 0.248033029930509 0.249632513658657 0.239726316555933 5 5 + 8382060 8383019 8382371.273 8378836 8383404 + gene protein_coding_gene TRUE TRUE AT5G24530.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE85154.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.62048150142524 17.4968326745559 3.76820542620637e-09 1.32693113875958e-06 18.6847549560157 19.1141238050853 1.62048150142524 0.0777055038700099 AT5G65390_at 1.96892214809562 2.4686615914912 1.08972581238838 1.03976883761910 3.22601900268681 3.42971532893272 0.729210437902435 0.752201557170305 2.12779627066404 1.59909167944164 7.89324879640153 4.42494831929353 4.1480647121097 4.36587612938782 7.42800731275115 2.08606222862986 1.48619148062227 4.31914439117183 1.68292669521145 0.351850046316732 0.358291369904385 0.355332970316534 0.362156020803184 0.364651474753865 0.36139779049572 0.358024627270393 0.364422360716246 0.353916690384714 0.359081373730551 0.390940667827579 0.363366650398758 0.361900232969057 0.383613360687657 0.392098320040201 0.353606323078136 0.361193903658501 0.355059487933037 0.351850046316732 5 5 - 26146109 26146472 26146175.273 26145810 26146564 - gene protein_coding_gene TRUE TRUE AT5G65390.1 AGP7 (Arabinogalactan protein 7) Identical to Classical arabinogalactan protein 7 precursor (AGP7) [Arabidopsis Thaliana] (GB:Q8LG54;GB:Q9FKQ0); similar to AGP4 (ARABINOGALACTAN-PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT5G10430.1); similar to 4D11_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67543.1); contains InterPro domain Glutelin; (InterPro:IPR000480) 1.71611484229939 17.4909592010004 3.78120224343138e-09 1.32693113875958e-06 18.6823161760181 4.99913532440332 1.71611484229939 0.0938741393145187 AT5G03240_at 10.8671970911430 10.8037662564274 11.9382183146162 11.8735909995323 12.2668316949162 11.8520393112318 10.4109177292054 10.0187873351136 9.16703393670567 8.98491403432408 10.9619607139295 10.6803550151713 10.9804530060178 10.9771524946665 10.8991841072017 10.8974685025414 11.1459777428495 11.0357985865854 8.53147609198103 0.13372014818392 0.131123995071118 0.131123995071118 0.132151325937912 0.138312563286821 0.138631252743690 0.133760552635015 0.131123995071118 0.151726993540750 0.164000733870231 0.133299106350727 0.133467525672835 0.131123995071118 0.134355621978474 0.133948269309948 0.131123995071118 0.139874136672911 0.137842852909544 0.168396330540352 5 5 - 772158 772857 772640.667 771724 773514 - gene protein_coding_gene TRUE TRUE AT5G03240.1|AT5G03240.2|AT5G03240.3 UBQ3 (POLYUBIQUITIN 3); protein binding encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.75516103027595 17.4847590320189 3.79497508049804e-09 1.32693113875958e-06 18.6797403132864 21.1748028209186 1.75516103027595 0.100015883817692 AT5G45550_at 7.4042312377376 7.28747073353432 8.56796864893165 8.92314947525182 8.72739749632474 8.4080985898743 6.75678735521492 6.61627989261723 7.60456868774813 6.7096729225915 9.18423890329196 8.61975702568288 8.41034981987457 8.78849080485438 8.98111321606085 8.66447271853079 8.7912689011412 8.55889812222507 6.81703210478468 0.173793414170373 0.167442059566211 0.178053570983121 0.171162386281808 0.166509892833516 0.177921494951593 0.175484642088687 0.170835115260234 0.167255870102746 0.191192617037303 0.167768283212467 0.164970199715038 0.179452293669620 0.168287508772041 0.179160287651804 0.164553819205538 0.172904309692553 0.171206387726795 0.180372586654506 5 0|5 /|+ 18480558 18481646 18480989 18479389 18482317 + gene protein_coding_gene TRUE TRUE AT5G45550.1 mob1/phocein family protein similar to mob1/phocein family protein [Arabidopsis thaliana] (TAIR:AT4G19050.1); similar to Mob1-like protein [Medicago sativa subsp. falcata] (GB:CAC41010.2); similar to Os03g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050541.1); contains InterPro domain Mob1/phocein; (InterPro:IPR005301); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 1.67326351586794 17.3927218582386 4.00599491405257e-09 1.38950950827627e-06 18.6413297373518 15.7332137256854 1.67326351586794 0.0884917986207475 AT5G55030_at 6.24348760106823 6.25765773912826 7.56859543053829 7.80381585415643 8.1444861678674 7.74272643354483 5.82834886485281 5.45163639848981 5.59025756036377 5.89690188241901 7.94734903715872 7.4297944691146 7.41245078526132 7.27774089355333 7.66952323592168 7.72222222135084 7.43126336865565 7.03514070939948 5.99215469460985 0.211119317886376 0.214810533338565 0.218663492652136 0.219579831048849 0.215789976122877 0.228166670187389 0.21368703133096 0.231753850211154 0.227104841171516 0.216089968051943 0.211119317886376 0.215293235532090 0.211119317886376 0.227133336740847 0.212942920839140 0.211119317886376 0.224349172424398 0.235759006388322 0.211119317886376 5 5 - 22344957 22345526 22345197.455 22344421 22347072 - gene protein_coding_gene TRUE TRUE AT5G55030.1|AT5G55030.2 similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT1G20670.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM22713.1); similar to Os03g0130800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048857.1); similar to Os09g0550000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063862.1) 1.76693543244818 17.3615141353509 4.08042781034869e-09 1.40409436405752e-06 18.6282313302251 13.5386561291305 1.76693543244818 0.103667198130049 AT5G13400_at 5.60570125309234 5.67188686294265 6.9606119392903 7.15970398826105 8.5687968813041 8.22156546461348 7.0308297352999 7.12974152605192 7.38847900276753 7.20399474819607 9.74655907446478 9.51673118822745 9.26147287676914 9.29245666318909 9.27126858737423 8.33406925043167 7.98581866916463 9.10263398754777 7.25130445091358 0.230578973706587 0.220311131725236 0.224405211985102 0.233753427782994 0.222615093154161 0.225980797045163 0.220739132366375 0.220240708901185 0.232486717767013 0.217354592629625 0.220903774006234 0.219933512600705 0.224092699991842 0.222439515085322 0.221498478793134 0.215672089924460 0.222212844735497 0.218514325676005 0.222359853016856 5 5 - 4296910 4297392 4297157.727 4296691 4299226 - gene protein_coding_gene TRUE TRUE AT5G13400.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G01180.1); similar to Os01g0103100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041755.1); similar to PREDICTED: similar to solute carrier family 15, member 4 [Canis familiaris] (GB:XP_548544.2); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.57537330527045 17.3241892871471 4.1714390805545e-09 1.42410931448740e-06 18.6125157815700 15.2161725502429 1.57537330527045 0.0722638187299618 AT5G03170_at 2.19063515237985 2.18587419679134 4.26365328918458 4.26203246160641 3.37948693296734 3.53695679291208 2.76272176296206 2.52597015064111 3.29250964854225 2.79000842238618 4.11572732321619 4.54128278430809 4.2251298508468 3.87671061919775 5.26115176022959 4.34408644021558 6.5824495616244 4.27811415479342 3.40333970128762 0.256205819216835 0.245050349513684 0.243535963131721 0.245192313739394 0.241369367616927 0.251685702397827 0.242923070448504 0.244583127185823 0.24865795769056 0.253440502620735 0.251262862660525 0.245633131251407 0.245313176692228 0.244271506033332 0.251422849077465 0.245559817942379 0.257343898146721 0.241595099848118 0.250215516391325 5 5 - 753011 753452 753249 752749 753656 - gene protein_coding_gene TRUE TRUE AT5G03170.1 FLA11 (fasciclin-like arabinogalactan-protein 11) Identical to Fasciclin-like arabinogalactan protein 11 precursor (FLA11) [Arabidopsis Thaliana] (GB:Q8LEJ6;GB:Q9LYW8); similar to FLA12 (fasciclin-like arabinogalactan-protein 12) [Arabidopsis thaliana] (TAIR:AT5G60490.1); similar to fasciclin-like AGP 13 [Populus alba x Populus tremula] (GB:AAT37956.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 1.46768051226965 17.2840469764460 4.2717998110765e-09 1.44697845585676e-06 18.5955533009217 7.04593341870193 1.46768051226965 0.0492137088645606 AT5G57550_at 4.24138957810927 4.64810131266610 6.06467300925298 6.22043321320804 6.2580663862724 6.77613634777145 1.23164336618348 1.41260339144314 8.67404277446867 2.88629923049243 9.00276741183844 3.12226804664262 5.85581387173754 7.23901132148025 5.92470492138734 4.14734554078227 3.83133127272938 6.87141968214163 4.74850843458063 0.249134048438278 0.253365016341100 0.249021914418456 0.256645536661079 0.254006364182113 0.261210322566335 0.262054778030919 0.267899099573968 0.257469726775454 0.249021914418456 0.252450970662258 0.252428228946309 0.251287549227254 0.249021914418456 0.253485516265270 0.249021914418456 0.250347397693378 0.25439452572192 0.249021914418456 5 5 - 23322400 23322993 23322605.909 23322114 23323647 - gene protein_coding_gene TRUE TRUE AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds xyloglucan endotransglycosylase-related protein (XTR3) Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) (XTH25) [Arabidopsis Thaliana] (GB:Q38907;GB:Q9SEB0); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to xyloglucan endotransglycosylase-related protein (GB:AAB18364.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 1.87972105288546 17.2663579410927 4.31685853502438e-09 1.45090590753079e-06 18.5880586240571 10.1994389448332 1.87972105288546 0.121239421327477 AT5G14930_at 6.30072743581703 6.50167634372005 7.42853122073046 7.57981681371174 7.05651452984804 6.69318007428838 4.04225769318973 3.79880432458432 4.46456034184806 4.55705904051124 6.37185192214376 6.22366131742402 5.90946719076963 6.38974400956759 5.58878588309027 5.90696136348332 6.04930010723505 5.7084708172192 5.22178051830318 0.226483152714637 0.220321001269114 0.222108097158093 0.228763868236839 0.220424727161705 0.225060765115378 0.223067874928394 0.227483908483554 0.247741525221914 0.240319811505644 0.217131048625863 0.222916230021657 0.223554004731356 0.216471328581684 0.22883866359966 0.22783790622192 0.219623844976318 0.226848610299863 0.233960125657282 5 5 + 4830181 4830725 4830415.909 4828643 4830958 + gene protein_coding_gene TRUE TRUE AT5G14930.1|AT5G14930.2|AT5G14930.3 SAG101 (SENESCENCE-ASSOCIATED GENE 101); triacylglycerol lipase|SAG101 (SENESCENCE-ASSOCIATED GENE 101) encodes an acyl hydrolase involved in senescence . |similar to PAD4 (PHYTOALEXIN DEFICIENT 4), triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT3G52430.1); similar to phytoalexin-deficient 4-1 protein [Solanum tuberosum] (GB:AAW82883.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to PAD4 (PHYTOALEXIN DEFICIENT 4), triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT3G52430.1); similar to unknown [Medicago sativa] (GB:AAZ32879.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 1.64968728489799 17.2208191328041 4.43526282381454e-09 1.47923491916885e-06 18.5687076866626 11.5583537011133 1.64968728489799 0.0873110538892809 AT5G02260_at 6.16890001075749 6.15491020564905 7.20388104351828 7.34705373586599 6.48601155217513 6.47282271122033 5.14813052449836 5.72238451969507 2.53097092907981 3.12747904403614 4.90355161925986 5.56511549269344 4.90416980019771 4.99605549671409 4.72611715071484 6.05595196615277 5.45504883540382 4.46308793122543 2.52221378990382 0.279187851306946 0.267796394487413 0.291744115647347 0.284051311848994 0.273405096106243 0.287406889870067 0.285474041071654 0.2699123688951 0.29345164438786 0.269104675092842 0.272872498968917 0.274947877154491 0.281022580499747 0.292993416735057 0.28464500530803 0.275332863763992 0.291492775680702 0.287671104330577 0.286378348422289 5 5 + 463525 464773 464112.182 463156 465244 + gene protein_coding_gene TRUE TRUE AT5G02260.1 ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A9 precursor (AtEXPA9) (Alpha-expansin-9) (At-EXP9) (AtEx9) (Ath-ExpAlpha-1.10) (EXPA9) [Arabidopsis Thaliana] (GB:Q9LZ99); similar to ATEXPA3 (ARABIDOPSIS THALIANA EXPANSIN A3) [Arabidopsis thaliana] (TAIR:AT2G37640.1); similar to expansin [Pyrus communis] (GB:CAH18933.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) 1.74280515554180 17.2018383422926 4.48565694637328e-09 1.48462203902993e-06 18.5606179869003 10.2682743916984 1.74280515554180 0.102473458283249 AT5G48250_at 7.21417995926139 7.08488427418281 6.1970362316265 6.10330626803739 7.60810011199139 7.44262027202306 1.44476239723222 1.61035302315336 1.91616182482468 2.06416383547180 2.10093722251062 2.23201451937562 1.95539333374552 2.27297687726782 2.58093635223877 1.79973695325624 2.11610190671109 2.32786712452209 1.29140535702472 0.258014989423215 0.259511653612584 0.257771718034233 0.252849794247966 0.251697156429309 0.253542293278809 0.247248091810659 0.242391863190463 0.245868736010222 0.259476710939313 0.243714599534201 0.244556462925019 0.244033966461057 0.24610057680406 0.242391863190463 0.247061236346926 0.242391863190463 0.242391863190463 0.248863659988432 5 5 - 19578959 19580903 19579794.25 19578545 19580948 - gene protein_coding_gene TRUE TRUE AT5G48250.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 10 (COL10) [Arabidopsis Thaliana] (GB:Q9LUA9); similar to COL9 (CONSTANS-LIKE 9), zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G07650.3); similar to COL1 protein [Brassica nigra] (GB:AAN09808.1); similar to COL1 protein [Brassica nigra] (GB:AAN09810.1); similar to Os02g0724000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047975.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 1.45761133561261 17.1731120759438 4.56311794384334e-09 1.49881801827301e-06 18.5483476136288 7.55339992151045 1.45761133561261 0.0490409294529362 AT5G01460_at 4.74411250139338 5.23991208957146 6.07490146702322 6.21409520931414 6.77921034215374 6.33524602033111 5.30994415884631 5.5057283683656 5.61133328858949 4.24504161031978 7.15178859051445 7.61625457842544 7.2450192054156 7.86525162155254 7.95079311930737 7.07992338720137 6.42064658990644 7.15657017616387 4.28844975744116 0.282613636863679 0.287497725791337 0.294565961780744 0.294079294010125 0.279448138089786 0.294921752251654 0.284949740546025 0.282791290794330 0.281361675422268 0.298686013260763 0.278320244022755 0.281489279061267 0.294839938617987 0.288550068196454 0.285342009392321 0.278320244022755 0.317637101602212 0.281322071245579 0.289153215196850 5 5|0 +|/ 188837 189818 189310.7 186693 190456 + gene protein_coding_gene TRUE TRUE AT5G01460.1 LMBR1 integral membrane family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08930.1); similar to LMBR1 integral membrane family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD44783.1); similar to Os06g0128200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056670.1); contains InterPro domain LMBR1-like conserved region; (InterPro:IPR006876) 1.87338916830272 17.1281348354178 4.68734837768023e-09 1.5280470760817e-06 18.5290698654409 11.7882549999637 1.87338916830272 0.122444937781454 AT5G51980_at 5.15960104165921 5.82827383328776 7.16884158417137 7.17208990065438 6.55266573712134 6.92623348527878 5.05860811606094 4.72226475115024 4.49140719305226 3.98150488482373 6.05492802709577 6.85899661379897 6.02353292093815 6.3822751734838 6.66993876318784 6.6387932842341 6.70422030742611 6.1364676147423 3.91991682779218 0.214164152628351 0.212471000808320 0.212537013210249 0.212867549156038 0.213855742788729 0.218496263512111 0.214398996047105 0.211726648789258 0.219883169786148 0.216246969076284 0.214663375742641 0.214836751219565 0.20962635948158 0.218568233243953 0.219905661169192 0.218374588696143 0.226021532594528 0.215005081736505 0.223237907511263 5 5|0 -|/ 21130887 21131896 21131435.5 21130591 21133423 - gene protein_coding_gene TRUE TRUE AT5G51980.1|AT5G51980.2 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative|nucleic acid binding similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 2.03273593041213 17.047555807097 4.91924578363189e-09 1.58715334126126e-06 18.4943307931616 11.3558658345077 2.03273593041213 0.144768638311257 AT5G02200_at 1.87831679844975 1.89772819286303 2.75460286743735 2.74391316336387 4.08934817182102 3.9251241441262 1.32698195875314 1.41121022377091 2.83858418171594 2.09449294060747 4.53143465827057 3.05551459138269 3.92779976576237 3.89442759861440 3.28606558203735 3.29841347352454 2.70711079931669 3.33521917526867 2.46942932006208 0.201224326203967 0.207598796804099 0.211553871717144 0.204447361883031 0.207985891218542 0.214957922315474 0.206400522864063 0.206355454414260 0.202872633668415 0.202366641384646 0.205052345162617 0.208887305865170 0.207228384004085 0.211349389870961 0.208132363090251 0.204019370884822 0.203765237579441 0.201224326203967 0.206620444199421 5 5 + 438275 438821 438474.182 437458 438892 + gene protein_coding_gene TRUE TRUE AT5G02200.1|AT5G02200.2 phytochrome A specific signal transduction component-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37678.1) 1.39334192564411 17.0399165193281 4.94187224272092e-09 1.58715334126126e-06 18.4910238346699 5.48940336656515 1.39334192564411 0.0321690904037861 AT5G57110_at 6.4051095146937 6.4693355696715 5.21141804951639 5.05572103489911 6.87707764668134 6.25581446341497 2.25649722774966 2.02769769069236 1.76859689526669 2.47374216865792 4.14923790465054 4.88337275573238 3.83582775073612 4.09692385633231 4.75841456972855 4.32884616418009 3.9608451847346 3.79533888271499 2.12744349142637 0.295219570099093 0.298021831123011 0.282443104988998 0.283289418367028 0.297466037834105 0.290141318327257 0.288068310342601 0.291963815268555 0.297580790280004 0.311086971690727 0.280756559934273 0.280756559934273 0.284849130769048 0.280756559934273 0.280756559934273 0.280756559934273 0.293442489465348 0.293010725548677 0.290630255372133 5 5|0 -|/ 23127205 23128147 23127652.333 23126665 23134789 - gene protein_coding_gene TRUE TRUE AT5G57110.1|AT5G57110.2 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding|ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calmodulin binding Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. Identical to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) (ACA8) [Arabidopsis Thaliana] (GB:Q9LF79;GB:Q9LU75); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) [Arabidopsis thaliana] (TAIR:AT3G63380.1); similar to ACA9 (autoinhibited Ca2+ -ATPase 9), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G21180.1); similar to putative plasma membrane calcium-transporting ATPase [Physcomitrella patens] (GB:CAD21958.1); similar to putative calcium-transporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD27978.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain ATPase, P-type cation-transporter, C-terminal; (InterPro:IPR006068); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014) 1.83159391487184 17.0216436467115 4.99645595581236e-09 1.59288454095710e-06 18.4831041813371 8.2445147673573 1.83159391487184 0.118221001021552 AT5G42560_at 7.28733667840973 7.04892306085782 8.48055042991296 8.51775444309729 8.64317015446822 8.57186162653755 6.41399059900063 6.23809427684902 5.84273028000816 5.86824798329398 7.04097187975398 6.96022338467816 7.22941956575675 7.06023446569358 6.96631881913867 7.08037375085942 7.42120245312076 6.98881538887075 6.23549356407059 0.191527979359207 0.183894629740402 0.188696844080661 0.183229303025758 0.188178648283913 0.191856411577988 0.181445754650412 0.189859096908325 0.205379297000814 0.186903043885857 0.185272604822132 0.181445754650412 0.189749813528515 0.183619175298168 0.188565192409822 0.181445754650412 0.197143794676481 0.183429240488503 0.194632115558683 5 5 + 17033480 17034014 17033845.909 17032151 17034480 + gene protein_coding_gene TRUE TRUE AT5G42560.1|AT5G42560.2 abscisic acid-responsive HVA22 family protein Identical to HVA22-like protein i (AtHVA22i) (HVA22I) [Arabidopsis Thaliana] (GB:Q8LE10;GB:Q9FH69); similar to abscisic acid-responsive HVA22 family protein [Arabidopsis thaliana] (TAIR:AT1G19950.1); similar to TB2/DP1, HVA22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65940.1); similar to Os03g0132300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048869.1); similar to TB2/DP1, HVA22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP52418.2); contains InterPro domain TB2/DP1 and HVA22 related protein; (InterPro:IPR004345) 1.45876784870890 17.0014798841171 5.05745276069302e-09 1.60056166218037e-06 18.4743493535754 14.1880112782791 1.45876784870890 0.0531279548254975 AT5G65070_at 1.28205174987756 0.941368030262758 3.04079974998241 2.71723941586722 2.24846469140492 2.34959803520701 1.89980346906531 1.63523241552175 1.91061630379558 2.89615079335678 4.59509441398734 6.09984358323721 4.86933336352827 3.32080551078099 4.70947307132728 3.64613976939396 3.9500539060062 4.66910434265297 2.05879152820764 0.318322510645706 0.318322510645706 0.318322510645706 0.318322510645706 0.318524001770203 0.325008888819698 0.318322510645706 0.319543757177745 0.318322510645706 0.319252500809258 0.333355869245246 0.334660327832372 0.324888810988759 0.327070146790218 0.336538968968511 0.318322510645706 0.332577780703102 0.338107099290248 0.318322510645706 5 5|0 +|/ 26009640 26013108 26012148.833 26009486 26013321 + gene protein_coding_gene TRUE TRUE AT5G65070.1 MAF4 (MADS AFFECTING FLOWERING 4); transcription factor Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. similar to MAF5 (MADS AFFECTING FLOWERING 5), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65080.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 1.67168650513058 16.9711407134324 5.15076763370447e-09 1.6142817121787e-06 18.4611454968475 5.39981996309909 1.67168650513058 0.094941025356809 AT5G25930_at 6.48049476600663 7.09913704649882 9.77081874730252 9.16496222899858 6.88459138738993 7.06308608678702 2.62172103874707 2.65214432396789 5.39014024057774 4.0691858792142 5.56082098152342 6.33877884650243 4.87586570164524 5.3820188976209 4.69976780147048 4.65622974247164 4.03047763791781 5.58012964444702 3.95508664253703 0.300412054670832 0.303059895347594 0.315275136029185 0.31645280006107 0.303145833080281 0.301013590203748 0.301680316346636 0.309038715191073 0.297507181590109 0.299064829748798 0.296429131102036 0.296429131102036 0.296429131102036 0.299864983228032 0.312152366896 0.296429131102036 0.299245091090422 0.307039636625668 0.297886328371643 5 5 + 9053301 9053902 9053673.909 9050797 9054146 + gene protein_coding_gene TRUE TRUE AT5G25930.1 leucine-rich repeat family protein / protein kinase family protein similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G25910.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17641.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17639.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81143.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 2.08826527736897 16.9632738199879 5.17526966950111e-09 1.6142817121787e-06 18.4577156641531 11.2731104919504 2.08826527736897 0.153088964712031 AT5G20830_at 9.04415913505312 9.02508842611897 10.2276686750072 10.1775468837830 9.792396252268 9.74684964684456 8.20436463358229 8.51126488835508 6.77610728593695 7.87109751822795 9.39854416343113 9.00879635057001 8.94955889579522 8.85313844817106 8.83640624183204 8.77076461311875 9.18466824453421 9.39356050077726 7.61129145546412 0.0985553923149945 0.0991066738353676 0.103663862895243 0.105481505824333 0.0986926778619018 0.0978708485622146 0.111780325755818 0.099661850252834 0.140843676665847 0.103640115131585 0.101396638905897 0.0970344882656592 0.0970344882656592 0.102494819409425 0.099300787555758 0.0970344882656592 0.101246498033797 0.106275497722427 0.107206101920509 5 5|0 -|/ 7050748 7051263 7051072.7 7050228 7055197 - gene protein_coding_gene TRUE TRUE AT5G20830.1|AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase Encodes a protein with sucrose synthase activity (SUS1). Identical to Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SUS1) [Arabidopsis Thaliana] (GB:P49040); similar to SUS2 (SUCROSE SYNTHASE 2), UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G49190.1); similar to SUS4, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G43190.1); similar to SUS3, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02280.1); similar to sucrose synthase [Citrus unshiu] (GB:BAA89049.1); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (GB:P49040); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (Nodulin-100) (GB:P13708); contains InterPro domain Sucrose synthase; (InterPro:IPR000368); contains InterPro domain Sucrose synthase, plants and cyanobacteria; (InterPro:IPR012820); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 1.45991351138368 16.9512343384603 5.2130141932077e-09 1.61444038953072e-06 18.4524617834442 17.5756315353707 1.45991351138368 0.054488355830573 AT5G56350_at 9.23231866477334 9.49676504141888 10.4991515014252 10.5559559950990 10.0438839895789 9.71967547193246 8.91622441083005 8.99084955431069 7.84846049729013 7.16634815518553 9.41430084769842 9.3483837436941 9.424174672101 9.4532866729291 9.28320406698446 9.4413777898279 8.97309413918639 9.30837618490429 6.81795338623319 0.142220403883296 0.136803570733022 0.140184464200838 0.141247057986303 0.139226196641556 0.146319585857013 0.13741068755586 0.135132869467083 0.154392184080425 0.167188487109168 0.134052930467346 0.133163668115722 0.133163668115722 0.138645416197455 0.138606445331161 0.133163668115722 0.158066612855808 0.137796396879270 0.18315449490561 5 5 - 22837513 22837938 22837783.545 22837232 22839992 - gene protein_coding_gene TRUE TRUE AT5G56350.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:CAI53675.1); similar to Pyruvate kinase [Medicago truncatula] (GB:ABE78303.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42954); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 1.54940737005253 16.9292795693031 5.2826195375946e-09 1.62439394878392e-06 18.4428658037884 17.9860341341220 1.54940737005253 0.0741996389101728 AT5G22500_at 1.51521362600432 1.36704240810991 5.00300821914798 5.37437923279479 8.77815419224862 7.49152943487484 1.64266135075861 1.28225508783302 5.06695135698699 3.05617609698083 5.8286127278715 4.19167883065706 1.98120973384279 3.69363054179937 5.54411543878443 2.51132284394901 3.12896438302791 4.6992983672066 2.31135653318924 0.264127772187354 0.264609899159293 0.283662679577289 0.27535612576507 0.267212345030934 0.281221387799499 0.276519666770369 0.264127772187354 0.285535808523938 0.266592337836129 0.264127772187354 0.264127772187354 0.269695483671009 0.27491928485823 0.272497417437599 0.264163878494168 0.264127772187354 0.276064142434499 0.264327583359949 5 0|5 /|+ 7472923 7473864 7473279.889 7470446 7474123 + gene protein_coding_gene TRUE TRUE AT5G22500.1 acyl CoA reductase, putative / male-sterility protein, putative similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44550.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44540.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44560.1); similar to acyl CoA reductase [Simmondsia chinensis] (GB:AAD38039.1); contains InterPro domain Male sterility; (InterPro:IPR004262); contains InterPro domain Male sterility C-terminal; (InterPro:IPR013120) 2.83958371546504 16.8744160405623 5.46103345498713e-09 1.65815437095811e-06 18.4188000105482 7.76953816269385 2.83958371546504 0.241358036165251 AT5G64510_at 5.43852275975485 6.03244682058580 8.39060698410926 8.57861689932512 6.41528313050258 6.5620167044792 2.98662810281579 2.5841165706955 2.39279235169423 2.12377198463689 2.43962217841342 2.75395431569790 3.22343414278038 2.50242085795516 2.88086778652756 3.20932253620051 3.64157888809133 3.07994099610745 2.62862313360816 0.264065805523802 0.265134493078412 0.272154339726501 0.264844401753414 0.265328361392804 0.283838794062859 0.257387347289596 0.263943484206096 0.261827997598419 0.263935305902715 0.274105897097887 0.267710542911190 0.26111219203921 0.264260108404742 0.262692367669633 0.261479097800724 0.266972583584230 0.263207875060498 0.261062980573567 5 5 + 25802921 25803337 25803117.909 25801630 25803533 + gene protein_coding_gene TRUE TRUE AT5G64510.1 similar to ORF; able to induce HR-like lesions [Nicotiana tabacum] (GB:AAC49976.1); similar to Os01g0767600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044361.1) 1.90543296110817 16.8636599541873 5.49677699471246e-09 1.65815437095811e-06 18.4140674093142 8.54759068121758 1.90543296110817 0.130841204894884 AT5G54490_at 4.68707191907716 5.19402141472538 6.4731053537454 6.74919551902105 6.26143106511526 6.10776614489388 2.44380253423497 2.28267590327463 3.45025460618914 2.74040614424023 3.99737103713473 3.92364625883543 4.00082386858492 3.48664797891839 4.11244621624061 3.63725550329827 3.84158555691118 3.61502929842519 3.1050798626189 0.256922499247892 0.23883081784022 0.245619491776957 0.245400255866535 0.245911577672503 0.260692443177488 0.246218153453284 0.242008712666674 0.247565525963266 0.248456296842756 0.245470423671006 0.238585549709782 0.244949807905328 0.244150357819604 0.238585549709782 0.238585549709782 0.246555649932949 0.243858909999525 0.242861849678038 5 5 + 22138687 22139043 22138866.545 22138630 22139157 + gene protein_coding_gene TRUE TRUE AT5G54490.1 PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27280.1); similar to Avr9/Cf-9 rapidly elicited protein 20 [Nicotiana tabacum] (GB:AAV92890.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.73712604415502 16.8495300812281 5.5441204945042e-09 1.65815437095811e-06 18.4078431389788 8.48759919133247 1.73712604415502 0.107070120353302 AT5G63970_at 5.32401480260711 5.44620813674378 6.91007721931373 7.13974718624544 7.29315017945068 6.92192711790655 4.94302214632449 4.97816704740035 3.72065730615235 4.30058226482260 4.8410457409264 5.18367062734875 5.14030925035782 4.97772301115341 4.76563385529544 5.36224689251702 5.72566089953578 5.71248433388603 3.90523210358341 0.258667082410893 0.258667082410893 0.283731718712025 0.270525470256608 0.262864346498220 0.274055782203256 0.258667082410893 0.258667082410893 0.279621564173847 0.264116789589202 0.258667082410893 0.26432328492322 0.274891381183635 0.271067845177348 0.267892763444349 0.260174249956372 0.277802653148254 0.262253111127347 0.260393670432194 5 0|5 /|- 25624226 25625060 25624596.714 25623997 25626473 - gene protein_coding_gene TRUE TRUE AT5G63970.1|AT5G63970.2 copine-related|protein binding / zinc ion binding similar to copine-related [Arabidopsis thaliana] (TAIR:AT3G01650.1); similar to Os01g0960500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045467.1); similar to copine-like protein [Oryza sativa (japonica cultivar-group)] (GB:ABG34341.1); similar to Os12g0288400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066593.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.56573933032582 16.8491540494706 5.54538648865711e-09 1.65815437095811e-06 18.4076773831414 10.7140829217809 1.56573933032582 0.0786820829199072 AT5G13080_at 2.96379332607719 2.78189635609563 7.21356242439701 7.5019183118587 2.97375202047366 2.84858942160416 0.798617852446432 1.08060609559131 1.05379267056382 1.45203143365327 1.30616245496449 1.09141702749787 0.939901576946944 0.875470563759713 1.28364120924679 1.11644610526134 1.11045063453311 1.11543996838136 1.08317221967431 0.310024012371822 0.300049588360244 0.336283999384482 0.325159998361334 0.297242699641749 0.311042664749767 0.285193080204266 0.285193080204266 0.291476450400318 0.293983150571115 0.299779391654703 0.285193080204266 0.291099222448416 0.285193080204266 0.288300985865793 0.293068403416682 0.294041191565816 0.290568302091523 0.292223668372978 5 5|0 -|/ 4149932 4150983 4150438 4149747 4151153 - gene protein_coding_gene TRUE TRUE AT5G13080.1 WRKY75 (WRKY DNA-binding protein 75); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 75 (WRKY DNA-binding protein 75) (WRKY75) [Arabidopsis Thaliana] (GB:Q9FYA2); similar to WRKY45 (WRKY DNA-binding protein 45), transcription factor [Arabidopsis thaliana] (TAIR:AT3G01970.1); similar to WRKY-type DNA binding protein [Solanum tuberosum] (GB:BAC23031.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.56838061082045 16.8258446863691 5.62448191778947e-09 1.67028588667519e-06 18.3973911771266 4.67094112633689 1.56838061082045 0.0795710295232375 AT5G41560_at 5.76359686270322 6.06589674407942 7.17612127676742 7.21891616796696 7.75936295891252 7.68066235308722 5.50323417010934 5.70445656474125 5.3939740962826 5.59556477434719 6.6949697188724 6.68795510932969 6.72323720486619 6.67349721456208 6.90998692847338 6.95197369852442 6.44618037478452 6.25756315691601 5.17932697852252 0.200824035786419 0.197275170494756 0.204065099644660 0.203453381810704 0.214865617211141 0.203369829204947 0.223926475937076 0.202740944486093 0.214213414421084 0.199822167305503 0.202400234277822 0.200819240826646 0.201659545216903 0.206668540383023 0.206217776954791 0.199928748510654 0.218286118415936 0.211435127302894 0.213053953729602 5 5|0 -|/ 16638658 16639818 16639127 16638479 16639884 - gene protein_coding_gene TRUE TRUE AT5G41560.1 similar to Os03g0125700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048819.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93748.1) 1.48900903992444 16.7750827536718 5.80102571605873e-09 1.71099444027059e-06 18.3749127209106 12.6379270750502 1.48900903992444 0.0647281951741361 AT5G23210_at 7.1797831704373 7.37400865993324 7.12368082810816 6.9970220998463 8.66732517439387 8.38343686340603 6.59323584233635 6.2925135877862 5.60950426254031 5.9949209816736 8.15789926360659 8.21904119258716 8.09903953008472 8.62270707357806 8.40124194820402 8.03246360201686 7.88988432091623 8.05756566288845 6.31977756994927 0.16258603429343 0.156092565836087 0.161584017316516 0.154665915268273 0.159129306798426 0.162246673575182 0.170626831305796 0.162880441777450 0.188002957482654 0.165049052587026 0.154665915268273 0.156371416509457 0.158068011157686 0.167530655409557 0.160163689887417 0.154665915268273 0.159140969639699 0.167052534481552 0.157914495141071 5 5|0 +|/ 7813848 7814782 7814296.3 7810686 7815042 + gene protein_coding_gene TRUE TRUE AT5G23210.1|AT5G23210.2|AT5G23210.3|AT5G23210.4 SCPL34; serine carboxypeptidase|SCPL34 similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to serine carboxypeptidase (carboxypeptidase D), putative [Musa acuminata] (GB:ABF70080.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)|similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)|similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 1.57161348958143 16.7155103022605 6.01596271347108e-09 1.75738211461546e-06 18.348396282291 14.4062330760924 1.57161348958143 0.0820491603414208 AT5G42420_at 7.28642176269782 7.31852433161234 7.36630900909214 7.61348070630043 9.04996825439495 8.54462828609294 5.98232713689465 5.18401038144114 4.73631132780784 4.81299402228176 7.35747412611412 7.67657017277407 7.21766656605614 7.32492818951396 7.57933758840744 6.55749647558678 6.78760315921309 7.38673355328882 4.15619656179373 0.219253648129841 0.204962393865114 0.204413479280121 0.210058409120470 0.232056135910547 0.211345195634206 0.224513486811385 0.210347217868478 0.223135956367922 0.212303046582233 0.204031604354937 0.205855201074947 0.21567440790151 0.212956812838145 0.223952100198189 0.216430516843876 0.235220494409679 0.209934758509724 0.230974984490569 5 5|0 +|/ 16986726 16987216 16987050.222 16985886 16987658 + gene protein_coding_gene TRUE TRUE AT5G42420.1|AT5G42420.2 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE94615.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853)|similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to putative transmembrane protein [Oryza sativa] (GB:AAK50365.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 2.18412562619175 16.7000616585297 6.07310995717584e-09 1.75738211461546e-06 18.3414957145535 13.1954471666477 2.18412562619175 0.169098631436194 AT5G01540_at 7.73422273855811 7.53269754353838 8.83717156862917 9.12662233429221 7.21054657087265 7.24979578811461 2.87247811599676 3.44819873628129 5.05409334476843 3.42566332909077 4.39276743716012 5.55418998759223 3.68408349277427 5.36640121520881 4.60852351281137 4.75013308479454 4.59283804167357 4.88028520648544 3.10194339706254 0.314833692893623 0.30308217451453 0.308045726852664 0.307276938806678 0.303206129715484 0.313806235885581 0.320277051590749 0.295821348951222 0.294514665510318 0.301052096232097 0.288928444810027 0.289661407079207 0.311048576579641 0.311550822432694 0.295446833649301 0.289661672447575 0.312766890680835 0.288928444810027 0.308303909086111 5 5 - 211289 211727 211463 210978 213471 - gene protein_coding_gene TRUE TRUE AT5G01540.1 lectin protein kinase, putative similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08870.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01550.1); similar to receptor lectin protein kinase-like [Cucumis melo] (GB:AAU04770.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 1.78861041944441 16.6982370949399 6.07989835659052e-09 1.75738211461546e-06 18.3406800627366 11.0460763933453 1.78861041944441 0.117037789502695 AT5G09570_at 3.20603284531156 3.32645916181752 5.37143151472474 5.35602128134933 4.88680214192115 5.00678648507662 2.90998509558316 2.87566871585024 3.03524146000271 3.14156279017507 3.31082646298783 3.27567686332884 3.64553767515565 3.56696121077314 3.47616797296259 3.79957129834967 4.58008016951459 3.29894241755795 2.75968034870337 0.265975551851216 0.258733644321931 0.283346716405404 0.29443566405274 0.27082502106759 0.300003209499167 0.26953709305254 0.268110322364801 0.266218565684203 0.264365709998568 0.258733644321931 0.261586093336137 0.264420461987342 0.262696928542943 0.258733644321931 0.268630310101066 0.272224965342052 0.2600971996593 0.264410161712087 5 5|0 +|/ 2971017 2971941 2971447.7 2970670 2972182 + gene protein_coding_gene TRUE TRUE AT5G09570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64400.1); similar to Os03g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050926.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1); contains InterPro domain CHCH; (InterPro:IPR010625) 1.35805810516454 16.6683712642609 6.19220117188463e-09 1.76570674126925e-06 18.3273090158207 7.4164227594322 1.35805810516454 0.0301303176272922 AT5G48560_at 3.20400451324216 3.14586509411727 6.18886110291357 6.53701144314869 5.36533348165441 4.75129423690182 2.6798605263097 3.25407126094534 4.00232647175881 3.2323174173293 5.40709908992045 4.18023601398756 5.62970576164713 5.66060661330094 3.97416192080106 5.38074116421055 5.50191714078762 5.90080943019625 3.76915865867982 0.248240329310585 0.248491352945376 0.270352842292046 0.258755061003498 0.259316313134386 0.261929069519975 0.260271533398813 0.256068561295383 0.262867730031459 0.256277045046936 0.269585146896697 0.246760629100207 0.250344497905332 0.263663429154960 0.246926363029405 0.247210862397209 0.249158961975691 0.247359916330843 0.246760629100207 5 5 + 19702460 19704043 19703599.909 19701232 19704377 + gene protein_coding_gene TRUE TRUE AT5G48560.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G07340.1); similar to Os01g0915600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045188.1); similar to TA1 protein [Oryza sativa (japonica cultivar-group)] (GB:CAE00874.1); similar to Os11g0442500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067817.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 2.08807508838407 16.6608440256837 6.22086124108383e-09 1.76570674126925e-06 18.3239331320418 8.826959619627 2.08807508838407 0.157788563805906 AT5G42370_at 3.41032327157825 3.95975562754451 5.92215134890489 5.87450664317684 6.52108800416766 6.01358468202985 3.97253331581406 3.98929531114334 2.40623863217833 2.98939464711592 3.75579168489069 3.65151365076536 4.9681882553873 4.8147614680187 4.10768346655407 4.53989914353838 5.08498998718987 4.56066494644284 3.4310573644987 0.259123794481113 0.255989551095577 0.277945282776549 0.267465652289489 0.260004868090586 0.271476243985627 0.256323285601372 0.259489598244274 0.279118595522593 0.264360382010751 0.256862342435956 0.255989551095577 0.258534814778753 0.255989551095577 0.261618779264580 0.257007159586585 0.260188113193325 0.266606044691561 0.257774038868321 5 5|0 -|/ 16956739 16957368 16957125 16956346 16958953 - gene protein_coding_gene TRUE TRUE AT5G42370.1 similar to alkaline phosphatase D [Pseudoalteromonas haloplanktis TAC125] (GB:YP_340375.1); similar to Os02g0592200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047291.1); contains domain Metallo-dependent phosphatases (SSF56300); contains domain no description (G3D.3.60.21.10) 1.87153107440026 16.6349724560603 6.32047676057977e-09 1.76570674126925e-06 18.3123118294783 8.64673817051795 1.87153107440026 0.129731744056297 AT5G64090_at 5.8167640149844 6.2672064285666 7.33882946185597 7.35915310610277 7.7597929906034 7.58202832229596 5.77562150943794 5.92460909326285 5.28783929369782 5.25584322282242 7.38724003816816 7.15858311280859 7.38765900648688 7.10448588158889 6.79452356156168 6.79706923471441 6.93606775257572 6.89589813940137 5.74731863389071 0.182198321259756 0.17869145473594 0.190200649636145 0.178529632521051 0.179588440477054 0.180966516961894 0.185984917748054 0.189149137450211 0.2004979092913 0.185058698672844 0.176225521416659 0.176225521416659 0.181279208999440 0.178624642027869 0.176225521416659 0.177077240371681 0.190542012661671 0.186760220055204 0.185418264911799 5 5 + 25666042 25666612 25666293.545 25665239 25666846 + gene protein_coding_gene TRUE TRUE AT5G64090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G21050.1); similar to Os11g0169600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065852.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91611.2) 1.59562891638057 16.6302745002501 6.33875175390287e-09 1.76570674126925e-06 18.3101985178877 12.9720128947472 1.59562891638057 0.0877489531761683 AT5G61640_at 7.36216909211793 7.5407190818313 8.94625004551575 9.16459339583966 9.26997069097082 9.17170837355672 7.46930134795614 7.54690297511049 6.0556464593372 6.09372257038635 7.29297487283608 6.84030906336648 7.56544280407851 7.58741903475313 6.37016553525404 7.36127447431492 7.62095638389504 6.88002895601408 5.82870168074821 0.240537342955606 0.236222137746524 0.240262305077014 0.255592510629929 0.257753702664756 0.243682965751536 0.239013926023736 0.241621041851101 0.240935957777096 0.255859136569647 0.237342994142192 0.236222137746524 0.242894741569108 0.245916192687424 0.245148202130665 0.236303644702759 0.243060051183893 0.245613815365237 0.248902559343099 5 5 + 24792385 24793277 24792698 24792261 24793616 + gene protein_coding_gene TRUE TRUE AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins similar to PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G07470.1); similar to peptide methionine sulfoxide reductase [Capsella rubella] (GB:AAR15455.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 1.42774432797845 16.6273629678758 6.35010651617909e-09 1.76570674126925e-06 18.3088883369821 14.9002076890563 1.42774432797845 0.0534039551073612 AT5G26040_at 4.83722941040726 4.78730640212592 6.39434452933611 6.36703734126871 7.74889400212981 6.60059100100623 3.82837400151283 3.83819017281997 3.13433827776295 2.73230749162363 5.47506548915627 4.70755747439115 5.44732239956239 5.70301413996476 5.15504905894708 4.85572472653144 5.8794580377033 4.72307820910641 2.68180634397320 0.258071850142378 0.258164411332443 0.273484253127408 0.259521661440758 0.287929524454069 0.277322323880053 0.256125607851662 0.257877214276991 0.265226149099520 0.276976476937069 0.256125607851662 0.262037729578673 0.257540555249983 0.27338444286319 0.258429262840606 0.259878023265333 0.265550865068671 0.256415710267628 0.282763943435611 5 0|5 /|- 9100533 9101181 9100778.333 9099160 9101639 - gene protein_coding_gene TRUE TRUE AT5G26040.1|AT5G26040.2 HDA2 (histone deacetylase 2); histone deacetylase Class III RPD3 type protein similar to HDA9 (histone deacetylase 9), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G44680.1); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286)|similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 2.42437068792624 16.6266100487831 6.35304645596969e-09 1.76570674126925e-06 18.3085494673776 9.59662972242933 2.42437068792624 0.198970282028893 AT5G01990_at 5.13769091818098 5.69196460416111 6.31259871001633 6.43966120626114 7.07205768539194 6.61620636192746 4.34986162713714 4.41253838879318 4.82444363749182 4.07346380096474 6.06011768046866 6.621631150024 5.69494509856923 6.7866092098177 6.25235913073177 6.75722917229986 6.19236720665294 6.09911464929589 4.14590364120233 0.218336382790848 0.223931964484449 0.235973666488482 0.22650579791383 0.223302395844601 0.231004455265839 0.22765800538977 0.219519199467091 0.222322765842438 0.227110469171535 0.219532482372192 0.221939277791698 0.21948020269142 0.226295671863789 0.221357201364943 0.218458233654010 0.235622191625564 0.230137328200554 0.23079565159002 5 5|0 -|/ 377438 378166 377707.111 377228 379908 - gene protein_coding_gene TRUE TRUE AT5G01990.1 auxin efflux carrier family protein similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G71090.1); similar to Os01g0818000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044627.1); similar to auxin efflux carrier family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD73344.1); contains InterPro domain Auxin Efflux Carrier; (InterPro:IPR004776) 1.83611337100533 16.5200684046404 6.78442964386448e-09 1.87359117907291e-06 18.2603554211128 11.0820642821264 1.83611337100533 0.126589575586328 AT5G19320_at 5.93944588075608 6.0036233286417 6.72996159382906 6.84396722646602 6.617543819864 6.8314098525216 5.44399275065576 5.39147087590824 4.29107783522356 4.67098920800348 5.79179205835956 6.43998137557832 6.35919216214314 6.18381305477596 6.1516868963092 5.98253500938849 6.23201158027868 5.92840872983471 4.32038567104771 0.190881662433110 0.184731922470947 0.191936874454815 0.190177048986309 0.183689939211114 0.200836779950768 0.182698543770983 0.190302469850402 0.194650670218840 0.194513881168417 0.183968756737754 0.182698543770983 0.189559728949592 0.189825249818535 0.187242090211374 0.184055900581070 0.194247353460136 0.182698543770983 0.190898151858048 5 5 - 6505447 6505865 6505673.545 6505112 6507437 - gene protein_coding_gene TRUE TRUE AT5G19320.1 RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase. similar to RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1), RAN GTPase activator [Arabidopsis thaliana] (TAIR:AT3G63130.1); similar to Os05g0543200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056202.1); similar to Ran GTPase activating protein [Medicago sativa subsp. x varia] (GB:AAF19528.1); similar to hypothetical protein [Oryza sativa subsp. indica] (GB:AAD27557.1); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor type; (InterPro:IPR007091); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor subtype; (InterPro:IPR003590); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 1.38364039221082 16.4931417565637 6.89844645999842e-09 1.89302065849925e-06 18.2480985735241 11.5057578392928 1.38364039221082 0.044328098686405 AT5G45750_at 8.41659380502959 8.5136173926981 8.27631986707353 8.313657425487 8.86994016065446 8.62021704927448 6.76683585905989 6.68186794835738 7.36875810680984 6.2612690694975 8.69543951309228 8.80756573552669 7.80997694971578 8.55575707645189 8.79037343308972 6.9440194619031 7.23577577205952 8.00448664551127 5.0806886190615 0.190416224202740 0.189979327662719 0.192884605462760 0.187932897204800 0.183408734578769 0.196736783766228 0.193038720455253 0.188164815987383 0.193340352214495 0.192585584862271 0.186531132189329 0.181270859759365 0.193063525301562 0.181270859759365 0.183343338405649 0.187281698784010 0.190089099591857 0.188454789499707 0.204315605158200 5 5 + 18577437 18577842 18577663.818 18576343 18578069 + gene protein_coding_gene TRUE TRUE AT5G45750.1 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding similar to AtRABA1d/AtRab11B/AthSGBP (Arabidopsis Rab GTPase homolog A1d), GTP binding [Arabidopsis thaliana] (TAIR:AT4G18800.1); similar to putative GTP-binding protein [Gossypium hirsutum] (GB:AAT64010.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.39691196631598 16.4569068030630 7.05519036964195e-09 1.92385685374692e-06 18.2315555445700 15.2285459827252 1.39691196631598 0.0490660628336445 AT5G56270_at 6.14270170950881 5.60576001909037 6.59731410030539 6.41238813669137 7.41763178836537 7.06102146933349 4.65254776708207 4.61549928653103 5.15416113772581 4.97799313419449 6.76885176874569 6.79585003378384 6.96117426368611 6.93700018750393 6.52556919606476 7.1698688537653 6.85108054993159 7.02278326957423 4.83132257535597 0.230211060121022 0.219761207200385 0.233887141301351 0.238659653980574 0.236687106154010 0.235598016769570 0.227579031864108 0.222224998388301 0.245762718695727 0.230478912198873 0.218254366602058 0.227971308960292 0.218254366602058 0.232065507210617 0.220923346011406 0.218254366602058 0.223569784208062 0.22119032170306 0.231538163550760 5 5 + 22799831 22800222 22800017.909 22796919 22800494 + gene protein_coding_gene TRUE TRUE AT5G56270.1 WRKY2 (WRKY DNA-binding protein 2); transcription factor WRKY transcription factor 2 Identical to Probable WRKY transcription factor 2 (WRKY DNA-binding protein 2) (WRKY2) [Arabidopsis Thaliana] (GB:Q9FG77); similar to WRKY34 (MICROSPORE-SPECIFIC PROMOTER 3), transcription factor [Arabidopsis thaliana] (TAIR:AT4G26440.1); similar to hypothetical protein [Solanum lycopersicum] (GB:CAC36402.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.75457916387201 16.4320178566199 7.16510383414878e-09 1.92468382065223e-06 18.2201597764933 11.9965319751838 1.75457916387201 0.116223633384341 AT5G54500_at 10.3318867274943 10.4749174714682 11.3485018737377 11.2601827209689 11.1982984244656 11.2261993855184 8.63759950509055 8.9502445046904 9.09330263332147 9.18884207507831 10.3886183825833 10.3622613281530 10.4816796757935 10.4520447396402 10.2482478232330 10.3118006338128 10.2780124547161 10.1569073629912 9.0336316426256 0.114847767268313 0.116683820526487 0.113538235534026 0.113795359946075 0.117572104002134 0.121784967080030 0.11696404032424 0.113160240352742 0.124674358068182 0.116826413643950 0.10904501284897 0.10904501284897 0.10904501284897 0.117922262708614 0.114989753135883 0.110623508246110 0.11333500739111 0.113311594835928 0.123732322802023 5 0|5 /|+ 22142909 22143430 22143159.9 22141782 22143730 + gene protein_coding_gene TRUE TRUE AT5G54500.1 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 1.44466065771352 16.4310480785274 7.16942417574478e-09 1.92468382065223e-06 18.2197152083293 20.1485814935745 1.44466065771352 0.0616189863002328 AT5G15190_at 1.78457234594105 2.12001676885318 4.39598812176959 4.37967792321348 6.03858738466174 4.9232088855483 2.30194830121700 2.14783980920331 0.908246679090983 1.15533354182322 2.46044324879725 2.85712797962616 4.16126946479902 2.75139255981382 2.27201733185581 2.44022380950001 4.6573763931556 2.86290237959061 1.05367145756673 0.268148434356515 0.2570292693523 0.263414433621645 0.265702996771154 0.269846687057853 0.266756382996182 0.2570292693523 0.2570292693523 0.267986326390702 0.268582145114956 0.260384834877091 0.2570292693523 0.259663626747047 0.266820911805472 0.260156880615705 0.262134886639402 0.282141131990062 0.264068377055598 0.264341440128086 5 5 - 4933155 4933456 4933281.182 4932823 4933580 - gene protein_coding_gene TRUE TRUE AT5G15190.1|AT5G15190.2 unknown protein 2.43226576277998 16.4261257209829 7.19139705183379e-09 1.92468382065223e-06 18.2174580620053 5.55994396191059 2.43226576277998 0.203337949150799 AT5G02860_at 6.36176945908604 6.01312488709798 6.88776164097083 6.76406188759677 7.91228930670569 7.47793087731504 5.44507671621059 4.80284915421894 4.01398551124553 4.29599528063846 6.18119276573735 6.79690883952631 6.98630885355746 7.0093455519729 6.17768769934737 6.2617344089384 6.54562303160313 6.07871646321149 4.09859377609209 0.231558800968533 0.232125077412119 0.240941827585183 0.238599256704668 0.237533638001780 0.245265439529016 0.237485895204528 0.235654189137939 0.245202561532246 0.241064863271301 0.238163557534765 0.234736703255675 0.231558800968533 0.237494622647694 0.235963731849126 0.231558800968533 0.235007643494122 0.237022778927575 0.239273905995170 5 5 + 656077 656512 656324.727 654100 656559 + gene protein_coding_gene TRUE TRUE AT5G02860.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G18940.1); similar to Os07g0590600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060154.1); similar to Os05g0275000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055073.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22929.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.98665202653590 16.4135369114759 7.24792713248289e-09 1.9279126654996e-06 18.2116806997609 11.7785486033480 1.98665202653590 0.148663742155368 AT5G20930_at 5.08663817118785 5.31860138451929 6.57893008166379 6.85038147859248 6.9581732091841 6.605433369865 4.9559510628866 5.03597492153898 4.29768930133195 4.31719129238435 5.68523817957115 5.82355815286342 5.61747563572553 6.16931582342971 5.81820775945139 6.05824812882916 6.00203465877567 5.82498646937614 4.51584671430404 0.213141996369293 0.203965215867718 0.212081096181835 0.204375701842977 0.211057719623299 0.212994496974509 0.214780643045599 0.210012267762757 0.213245151583794 0.216066176585479 0.203696419481653 0.210124417810761 0.207633089555972 0.221962408885021 0.21007807885717 0.203696419481653 0.213369858470039 0.209916400263928 0.206268504856668 5 5|0 +|/ 7102142 7102937 7102573.8 7097910 7103200 + gene protein_coding_gene TRUE TRUE AT5G20930.1 TSL (TOUSLED); kinase Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. Identical to Serine/threonine-protein kinase TOUSLED (EC 2.7.11.1) (TOUSLED) [Arabidopsis Thaliana] (GB:Q39238;GB:Q8LPL1); similar to ATAUR3 (ATAURORA3), ATP binding / histone serine kinase(H3-S10 specific) / protein kinase [Arabidopsis thaliana] (TAIR:AT2G45490.1); similar to tousled-like kinase 1 [Zea mays] (GB:AAT66019.1); similar to tousled-like protein kinase [Triticum aestivum] (GB:AAW31855.1); similar to tousled-like kinase 2 [Zea mays] (GB:AAR35033.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.57345607406124 16.3869620617777 7.36886030371697e-09 1.94812858010519e-06 18.1994622091263 11.0496565617679 1.57345607406124 0.0879557041458125 AT5G60550_at 6.46609981756297 6.50214117053545 7.4651242913306 7.34506353827473 7.47251656318484 7.45913043404621 5.74907466860493 5.94221670424234 6.25123823884564 6.37477519405352 7.76135929791136 7.71229130960443 7.60437490105042 7.69247057050551 7.55435184543244 7.81857308076401 7.53912689142843 7.55606693283925 6.02773522245234 0.148392055653854 0.147420620388962 0.142554292608355 0.145369786820600 0.142479778006088 0.145225265628701 0.160234663632900 0.15307587252196 0.153970887775372 0.164147758089599 0.143186139965348 0.144704822131015 0.156952855394846 0.150015429379160 0.144051407714309 0.143225827757158 0.153106090885582 0.147889533578968 0.149414224383098 5 5 + 24358566 24359547 24359166.727 24356455 24359816 + gene protein_coding_gene TRUE TRUE AT5G60550.1 GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2); kinase similar to GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45240.2); similar to Protein kinase [Medicago truncatula] (GB:ABE79890.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.35374312585708 16.3003783181949 7.7783981809586e-09 2.04393635937507e-06 18.159439844185 13.736542434544 1.35374312585708 0.0399139985696126 AT5G58510_at 4.54352294755944 4.35291477416254 5.43454375026196 5.13411493390942 5.18374832218362 4.94116717845155 3.2318097465174 3.24131828109882 3.92893491838434 3.35731634237968 5.5688655216622 5.76665942617182 5.49122420253002 5.90229147912096 4.97014549344874 5.33928091307695 5.522486116617 4.65222839827602 3.98734718855713 0.245903439470972 0.232314500310276 0.234518396824084 0.233037286833154 0.237411663369427 0.231926644387910 0.241889015951026 0.229945320402930 0.228842445810867 0.236720534700302 0.239332765580685 0.237964841973103 0.228842445810867 0.239395925005817 0.232918685601277 0.23178459678334 0.228842445810867 0.238067901459650 0.235278558579645 5 5 - 23665537 23666250 23665864.182 23665379 23671778 - gene protein_coding_gene TRUE TRUE AT5G58510.1 similar to catalytic [Arabidopsis thaliana] (TAIR:AT5G55060.1); similar to PREDICTED: similar to KIAA0066 [Gallus gallus] (GB:XP_422135.2); similar to Os03g0295700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049826.1); contains domain FAMILY NOT NAMED (PTHR21422); contains domain SUBFAMILY NOT NAMED (PTHR21422:SF3) 1.48739182647817 16.2331909855572 8.11330708418731e-09 2.11609473242382e-06 18.1281568686833 9.08764941358643 1.48739182647817 0.0745391603825707 AT5G43910_at 7.06387047038907 6.83338483694872 8.36721714617014 8.4440568531874 6.7812046929904 6.67517233639369 3.07281268168397 3.21844729349955 4.24848829520661 3.9419966532393 4.21673481153207 4.42495962593444 3.74892145505594 4.28061744056291 4.08970461091427 4.10172928322869 4.62162704262374 4.1169335672923 3.6420348478448 0.270600034605393 0.272252981547696 0.26011975616081 0.266877527553431 0.261341604813327 0.263930071363643 0.262576370560139 0.268205259682268 0.263446569133592 0.254438024735013 0.261386001075203 0.254438024735013 0.262814975380526 0.254438024735013 0.266047157998173 0.257658899955578 0.265681339225642 0.254438024735013 0.263000656790365 5 5|0 -|/ 17684991 17686324 17685475.625 17684537 17687466 - gene protein_coding_gene TRUE TRUE AT5G43910.1|AT5G43910.2|AT5G43910.3 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.3); similar to Carbohydrate kinase, PfkB [Medicago truncatula] (GB:ABE82653.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Ribokinase; (InterPro:IPR002139)|similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.3); similar to Os08g0566400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062541.1); similar to Carbohydrate kinase, PfkB [Medicago truncatula] (GB:ABE82653.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) 1.38788207538395 16.2098824094269 8.23314331255088e-09 2.11609473242382e-06 18.1172576663235 10.3791841614445 1.38788207538395 0.0523416035358854 AT5G25080_at 4.25049714069348 4.46763570297016 5.8215609269233 5.84144660025096 5.58626189356131 5.69416428497482 4.38215724950488 4.77288158847139 2.88532193465614 3.23727804576169 4.7569442035517 4.94683601500503 4.53943083677762 4.7090997779528 5.59875003324421 4.83617247728711 4.5540466377739 4.80049478523627 3.14537101984679 0.227118451873203 0.224747523593781 0.225325778868664 0.229468959851004 0.223446159386203 0.227212101070609 0.223522488536268 0.227438984031222 0.243101794436610 0.235251770598241 0.223446159386203 0.225718209416883 0.22892934582642 0.227478034080606 0.224592347898464 0.223446159386203 0.237067013747097 0.237348172845809 0.230957640571094 5 5|0 +|/ 8643854 8646249 8645206 8643675 8647061 + gene protein_coding_gene TRUE TRUE AT5G25080.1 similar to Os08g0270200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061417.1); similar to Putative protein [Hordeum vulgare subsp. vulgare] (GB:ABL11227.1); contains InterPro domain Exosome-associated; (InterPro:IPR011082) 1.51048184255816 16.2001133233054 8.28394219650988e-09 2.11609473242382e-06 18.1126824376512 9.06809842972301 1.51048184255816 0.0796527268770324 AT5G59050_at 5.61175770253469 5.94183247296351 7.90831447843172 7.93084332633405 8.52958674720111 7.86619423140096 7.29685591851653 7.31766808892692 5.27441514657074 5.48248454245232 7.50040207455583 7.44273043001806 8.15547336234406 7.76727249734359 6.62805205566404 8.15334870109279 7.58516090451956 7.21208463397396 5.58546160066893 0.271798249798804 0.258030398292997 0.257370024379667 0.256996851685436 0.252712708739839 0.254667572173459 0.257370551957743 0.253439842988863 0.289521398403479 0.253679718891887 0.252712708739839 0.255391611139281 0.257103331771253 0.252712708739839 0.257323269986499 0.252712708739839 0.277541271667900 0.263228396210429 0.261344494288308 5 5|0 -|/ 23858844 23859568 23859189.333 23856383 23859903 - gene protein_coding_gene TRUE TRUE AT5G59050.1|AT5G59050.2 |unknown protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54000.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33149.1)| 1.81240898465744 16.1966768835651 8.30189277596336e-09 2.11609473242382e-06 18.1110720177844 13.8018912936235 1.81240898465744 0.128338402711636 AT5G51740_at 7.50424931780609 7.58434265653938 8.87924859018701 8.77296988408255 8.70055661937388 8.61206502636713 7.31873735876583 7.43886301940126 6.91641723955943 6.96315700551795 8.19246166522338 8.03536775344538 8.37699939269804 8.36952444176394 8.07542844188057 8.2641001513805 8.03287288502518 8.42453440500809 6.64347956626333 0.132890773391454 0.135081681548581 0.127764570568613 0.130538393323308 0.130467215943850 0.132940868975674 0.131760289429984 0.131878844773779 0.144690559115786 0.136527564699098 0.127329139913981 0.128215342712486 0.126455521824038 0.129600719284253 0.130773214671176 0.126834228761229 0.130587617011006 0.129648905278415 0.140510845617025 5 5 + 21035097 21036175 21035675.909 21034253 21036447 + gene protein_coding_gene TRUE TRUE AT5G51740.1 peptidase M48 family protein similar to Os02g0735100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048044.1); similar to putative protein [Ipheion uniflorum] (GB:AAX21203.1); contains InterPro domain Peptidase M48, Ste24p; (InterPro:IPR001915) 1.33002757340703 16.1915365716989 8.32882296500915e-09 2.11609473242382e-06 18.1086621332355 15.6325935986487 1.33002757340703 0.034598402485683 AT5G57740_at 4.21236678116688 4.23318489995136 5.37901106204267 5.39395786273329 5.70790613020031 5.94130002907951 4.60348082143307 4.25921755217314 3.44732826567602 3.81713522005347 5.64972047980828 5.06799974472491 5.39848237972494 5.10532831053529 4.57044528691351 5.58423789543177 5.47905828968525 5.46104745967349 3.61270843813056 0.232282037950742 0.231724536340980 0.235890643442237 0.232343656473863 0.230407653476047 0.227567479092408 0.228840974964586 0.236568727381254 0.239658087661427 0.237951695906115 0.235894744410701 0.231931795244222 0.231013263656868 0.232654212162852 0.233826038406434 0.229594400641253 0.246955038772882 0.244346304374026 0.237749939776227 5 5 - 23412051 23412662 23412336.455 23411811 23414876 - gene protein_coding_gene TRUE TRUE AT5G57740.1 XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32); protein binding / zinc ion binding ubiquitin ligase similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07270.1); similar to Os02g0791200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048357.1); similar to pollen ankyrin-like protein [Lilium lon (GB:AAY26120.1); similar to Os08g0258200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061386.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.47114863176250 16.1860747863952 8.35754183568088e-09 2.11609473242382e-06 18.1061002493279 9.42393512006362 1.47114863176250 0.0721135025215615 AT5G10695_at 8.47425216582567 8.4529226336389 9.53570258376825 9.29564199119242 9.38055240306224 9.00830650532436 5.76109013224575 5.2827517871717 6.29732983030644 5.19998172134742 6.52786905375532 6.03486996910464 6.38953793141028 6.78924239672548 5.91060488070777 6.86095334666961 7.33150862894421 6.75395311534982 4.9311615583687 0.249319455432938 0.25182268344837 0.249001670874381 0.263817272757985 0.260735850718213 0.258511505821450 0.234100489673385 0.241302075939158 0.248151513744812 0.253147996222165 0.234842817098228 0.235751141184326 0.233231719315698 0.233231719315698 0.256591801255855 0.234691646374647 0.242070105847132 0.234247574031566 0.257328553790966 5 5 + 3377818 3377997 3377902.545 3377664 3378222 + gene protein_coding_gene TRUE TRUE AT5G10695.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57123.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28467.1); contains domain Glucocorticoid receptor-like (DNA-binding domain) (SSF57716) 1.70547820155443 16.179048429724 8.39464646114788e-09 2.11609473242382e-06 18.1028025436594 14.1743900846158 1.70547820155443 0.112878692546691 AT5G42470_at 6.7240320900168 6.70880011618804 7.8959780682894 7.92399392806912 8.02246181846404 7.94982360010477 6.2768336429736 6.10637627985018 5.93194138897416 5.78830145124826 7.35638487357697 7.04774452374517 6.71597590901028 7.2678653105089 7.20523977023648 7.51084403606034 7.35873520450959 7.27679407291736 6.49852113111898 0.218008296681350 0.203952601439227 0.211370184603850 0.218895401476316 0.213166152771445 0.215041573549620 0.208342800360485 0.216070277808902 0.232101225147674 0.209574417063388 0.209158858459499 0.210700859874501 0.203967527576930 0.218736705576950 0.215044866729520 0.210654188844346 0.213446623028391 0.203952601439227 0.226697147823457 5 5|0 +|/ 17000730 17001941 17001525.429 16999533 17002112 + gene protein_coding_gene TRUE TRUE AT5G42470.1 similar to Os06g0715600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058586.1); similar to MGC83547 protein [Xenopus laevis] (GB:AAH73095.1); contains InterPro domain Brain and reproductive organ-expressed; (InterPro:IPR010358) 1.31929023013242 16.1234652017647 8.69458334599806e-09 2.17903303424056e-06 18.0766379233575 13.8462220861700 1.31929023013242 0.0325365433816244 AT5G50840_at 7.18322511268916 7.0681001371407 8.62679287716647 8.42454742060933 8.58141383405738 7.8843653288351 6.14984384077862 6.31372115085926 5.21127698109458 4.79594162542967 7.15204379025843 7.21608435996033 7.06694341975846 7.25905547363193 6.968792937952 7.16338732754763 6.74173282618024 6.7225885655102 5.32064823725797 0.241689862285032 0.233244127032692 0.239478735432834 0.241988631185323 0.235506355497253 0.243212906860766 0.235696362099546 0.238280233930377 0.25832474887209 0.245102805107327 0.234517159933945 0.233244127032692 0.240823257564927 0.240492517052452 0.245716640135254 0.235025314049276 0.24296642663011 0.246706950489025 0.233244127032692 5 5|0 +|/ 20704678 20705940 20705346.7 20703046 20706144 + gene protein_coding_gene TRUE TRUE AT5G50840.1|AT5G50840.2 similar to nuclear matrix constituent protein-related [Arabidopsis thaliana] (TAIR:AT1G13220.2); similar to Alpha-taxilin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95380.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 1.81379847223631 16.0865861379659 8.90003208317683e-09 2.19625145755609e-06 18.0592016175449 13.6018099805307 1.81379847223631 0.130296415124167 AT5G12390_at 7.46998474522698 7.60319744494839 8.67424135462252 8.64920000705003 8.80501813637374 8.52326748630958 6.50392967989426 6.34337415236785 6.25795614445788 6.39555933786552 7.44308813450112 7.231431194384 7.75388168445174 7.51669794082261 7.01366155187401 7.71897883514949 7.9223950639736 7.7499787781997 6.56041803171709 0.168329882298152 0.169463668679524 0.177827789612141 0.178406021592293 0.174201080213361 0.179858120157805 0.167601837092552 0.172766127672666 0.191064340884772 0.173194425152984 0.182376568869246 0.169707321998370 0.171198496045654 0.174945772405999 0.169298961119042 0.173195908815987 0.177679802601399 0.166838698421235 0.174393970035236 5 0|5 /|- 4010954 4011563 4011221.7 4010444 4012040 - gene protein_coding_gene TRUE TRUE AT5G12390.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G57090.1); similar to Os01g0951800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045414.1); similar to Os05g0383000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055409.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87890.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.41096494185948 16.0861250286466 8.90263415805232e-09 2.19625145755609e-06 18.0589832199866 14.795730952149 1.41096494185948 0.0608242705483347 AT5G52310_at 10.6348891313396 10.5882084577401 10.3671726787914 10.1941912035967 10.6622269956149 10.5410389690094 9.30106984471297 9.36078323823811 6.77177511343725 8.19026620728343 9.6332030567281 9.30483723744285 9.91345972831708 9.61859421357548 9.1048615526619 10.7207081989531 9.56079028422797 9.73689698367555 7.54936176113047 0.134869532236404 0.132164771508034 0.130554017991328 0.129700208188498 0.135195292104389 0.135215570778745 0.133458181209188 0.129399111824198 0.176368919812575 0.158856345753871 0.137803781722685 0.133624408585526 0.129399111824198 0.138419432515278 0.146863132286195 0.130210830356437 0.142903013353665 0.133203956932805 0.167320824529243 5 5 + 21259953 21260519 21260289.818 21258075 21260839 + gene protein_coding_gene TRUE TRUE AT5G52310.1 COR78 (COLD REGULATED 78) cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression Identical to Low-temperature-induced 78 kDa protein (Desiccation-responsive protein 29A) (LTI78) [Arabidopsis Thaliana] (GB:Q06738;GB:Q04981); similar to RD29B (RESPONSIVE TO DESSICATION 29B) [Arabidopsis thaliana] (TAIR:AT5G52300.1); similar to cor78 (GB:AAA32776.1) 1.33264383670473 16.0838912537474 8.91525127399053e-09 2.19625145755609e-06 18.0579250904472 18.8076825319961 1.33264383670473 0.0388329048242126 AT5G22310_at 5.74427140433807 5.81138806105036 6.21215022736234 6.10118978404222 6.63896741523901 6.78641014440026 4.3890020575199 4.48088548039626 4.09187882697408 4.32952315184823 6.28133400390507 5.86425194713371 6.3311875841764 6.4183793344553 5.60493895845238 6.40505772925236 6.4795248462096 5.94215120180638 6.1005609850265 0.233151449343334 0.233776109617777 0.23613227375270 0.235737849036506 0.240504553581841 0.240011267426352 0.245752206505781 0.252280629891311 0.266153951645056 0.255378736647588 0.236140617159137 0.238270226257463 0.233151449343334 0.241967688500228 0.246690635506833 0.234253169994132 0.251911772901410 0.235326658558974 0.243567111245297 5 5 - 7383757 7384135 7383975.727 7383632 7385737 - gene protein_coding_gene TRUE TRUE AT5G22310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11590.1); similar to Os04g0382800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052610.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23171.1); similar to OSJNBa0072D21.15 [Oryza sativa (japonica cultivar-group)] (GB:CAD40733.2) 1.32674576066288 16.0571909521059 9.06758328246362e-09 2.22115787903355e-06 18.0452598835446 11.2737868327720 1.32674576066288 0.0375168731060023 AT5G66850_at 5.51486084831545 5.28013759230849 6.9781438196689 6.87947291478618 5.87251971650039 6.58391187563178 3.90950526417433 4.26923182054909 5.41959441151892 4.37374799449899 6.69274133338814 6.96703402267694 6.19560793085049 6.68916655737683 6.69197479078457 7.41401476222659 6.84131000222839 6.27578101249813 4.39420738938976 0.220110677263509 0.220477783339963 0.222719562700031 0.224489673121216 0.219884770280261 0.220432683801952 0.216062849523351 0.222739976920446 0.227387572701329 0.227528884645917 0.220798065421856 0.217814049447434 0.222800278151421 0.217456904430914 0.221956253151425 0.219872133340497 0.219573868997780 0.22676159136266 0.220500627966694 5 5|0 -|/ 26713224 26714078 26713666.1 26712833 26716550 - gene protein_coding_gene TRUE TRUE AT5G66850.1 MAPKKK5 (Mitogen-activated protein kinase kinase kinase 5); kinase member of MEKK subfamily similar to YDA (YODA), kinase [Arabidopsis thaliana] (TAIR:AT1G63700.1); similar to HA-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06425.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 1.91342436833892 16.0437588968668 9.14528824899661e-09 2.22760681854736e-06 18.0388762753943 11.3860415148116 1.91342436833892 0.144820281664761 AT5G37540_at 4.18349742817358 4.45154979254652 5.77604837647551 5.81880981998379 5.99232341280147 5.83373054375473 3.25695850951139 3.99640803154564 3.57872566698858 3.04194594003727 5.21209233048483 4.94495176940941 4.64015189631733 5.07927055364331 5.10135104114744 5.38332138122152 5.13798825151244 5.42972832092852 3.16080408671355 0.217803340066284 0.215089427457837 0.212081174510836 0.213086375372688 0.219856932683727 0.208446142885867 0.221733516837475 0.210685244563988 0.215229588970459 0.231236859976513 0.205959694111405 0.209843821472118 0.206080615869409 0.212527208236296 0.211251186302462 0.206636369855799 0.215618510132963 0.209886083178058 0.212761841387293 5 5 + 14930836 14931283 14930993 14930065 14931661 + gene protein_coding_gene TRUE TRUE AT5G37540.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G66180.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Aspartic proteinase nepenthesin-1 precursor (Nepenthesin-I) (GB:Q766C3); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.86936982148978 16.0271249621135 9.24252467594806e-09 2.23871459264281e-06 18.0309596678396 9.1019651598472 1.86936982148978 0.139050031329862 AT5G25190_at 5.44104869052098 5.10428720610708 5.05319063416005 5.6330234690269 8.27376008633686 8.11850885141298 4.50655316971286 4.99158290299949 8.64977372028995 6.56283410493695 10.5682603782947 9.88011572417267 9.66151632283277 9.93505959002068 10.2435079475601 9.51974873815655 8.44740976091719 9.4496328640956 7.7189299079855 0.244061044663360 0.240646031573569 0.238271419663263 0.233217885365789 0.22053488211702 0.22053488211702 0.232319051891535 0.228961867725194 0.225669427577766 0.238946680186692 0.222690535224730 0.22053488211702 0.222509217152283 0.222163412247275 0.22475482323306 0.22053488211702 0.230109976449938 0.220558806634760 0.221053210738833 5 5|0 -|/ 8707040 8707629 8707336.9 8706793 8707751 - gene protein_coding_gene TRUE TRUE AT5G25190.1 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to SHN1/WIN1 (SHINE1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G15360.1); similar to ethylene response factor 1 [Lycopersicon esculentum] (GB:AAL75809.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.91403163629229 15.9938331393218 9.44054281651574e-09 2.25901066061868e-06 18.0150774031347 14.5687455396982 1.91403163629229 0.145712767022402 AT5G47100_at 3.95578472936924 4.18479530388242 5.60212129395883 5.64504838102529 5.95926507862088 5.97234903045776 4.54025356503316 4.7177421128078 4.18670346600053 4.22005041788006 5.47197429146039 5.57464402186663 5.21281632777755 5.69366941053651 5.30414966176549 5.3044701733729 6.0282863683662 5.401825722172 4.24633848902871 0.230073250723568 0.227193431144703 0.237119287952095 0.233381181585246 0.232736315166781 0.238967861928808 0.228589810552063 0.242917567969961 0.241985247880065 0.231033785560073 0.232007735790812 0.22924498985347 0.234466763196668 0.232730317012890 0.233216849034676 0.231880880906745 0.234140195794080 0.244101918272546 0.228456728010942 5 5 - 19147158 19148886 19147723.182 19146867 19149510 - gene protein_coding_gene TRUE TRUE AT5G47100.1 CBL9 (Calcineurin B-like protein 9); calcium ion binding member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) Identical to Calcineurin B-like protein 9 (CBL9) [Arabidopsis Thaliana] (GB:Q9LTB8); similar to CBL1 (CALCINEURIN B-LIKE PROTEIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G17615.1); similar to calcineurin B-like protein, putative [Brassica oleracea] (GB:ABD64921.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 1.36316702888541 15.9895020435731 9.46664237142703e-09 2.25901066061868e-06 18.0130075029586 9.930508414295 1.36316702888541 0.050738362092881 AT5G60490_at 1.43957932324330 1.52757414974390 2.635305532684 2.69353211677415 2.28318853672019 2.52217869015202 1.89991643827953 1.67832001617986 1.85756421362807 1.94898421062248 3.50748794857856 3.72075150726956 3.51564627617624 4.52564179309366 4.25547500476554 4.02186035247677 4.91335746143314 3.75808265203811 2.59172130737586 0.268434961461790 0.269429100526170 0.270520265253671 0.262518259450712 0.262518259450712 0.284366779460654 0.276260780633238 0.263386459138129 0.271186134076259 0.262518259450712 0.267769466375751 0.263851946714772 0.264575554964906 0.282100557265544 0.269630611758099 0.267651252708771 0.269647034210894 0.264511003063431 0.262518259450712 5 5 - 24343176 24343695 24343462.091 24342953 24343928 - gene protein_coding_gene TRUE TRUE AT5G60490.1 FLA12 (fasciclin-like arabinogalactan-protein 12) Identical to Fasciclin-like arabinogalactan protein 12 precursor (FLA12) [Arabidopsis Thaliana] (GB:Q8LEE9;GB:Q94EG7;GB:Q9FKJ8); similar to FLA11 (fasciclin-like arabinogalactan-protein 11) [Arabidopsis thaliana] (TAIR:AT5G03170.1); similar to unknown [Brassica rapa] (GB:ABB97042.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 1.39586751724554 15.9868564108617 9.48262390275462e-09 2.25901066061868e-06 18.0117426929821 5.16497157631600 1.39586751724554 0.0592834592930858 AT5G14270_at 7.84349206392262 7.83462860331 8.67042694866062 8.61800552789005 9.06448220670531 8.88583755370847 6.7576019589132 6.98323138682089 7.43869822379304 6.53457326544856 8.47074091144148 8.19077165692655 7.90667028841931 8.25788131915862 8.01690113469091 8.0438561473075 8.25983644832225 8.0883487166624 6.6992549384153 0.183958424543817 0.174897513111542 0.176656463271055 0.176306676122258 0.181661845453837 0.179334683936450 0.174483669885802 0.18625753559449 0.177091006882905 0.193149996027987 0.178113623890156 0.177505669359623 0.177296333576117 0.180682424068940 0.179000872187323 0.177436654098096 0.179419491192131 0.186945724099001 0.191264516209139 5 5|0 +|/ 4607645 4608473 4608266.3 4604735 4608908 + gene protein_coding_gene TRUE TRUE AT5G14270.1 ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9); DNA binding similar to ATBET10 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10), DNA binding [Arabidopsis thaliana] (TAIR:AT3G01770.1); similar to putative bromodomain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08859.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 1.35924162065663 15.9473443090206 9.72484109036988e-09 2.30194649420152e-06 17.9928150188174 15.6048222664506 1.35924162065663 0.0506459536453246 AT5G65630_at 7.04121965632241 7.03633776912592 8.05359984763955 8.12244375596928 8.55524912188677 7.92678706425178 7.23360430606112 7.0531045325957 6.09491185767633 6.52786187088285 9.09857123362832 8.95669731532285 8.80799526558197 9.03548084783418 8.19711939895216 8.5661058832512 7.97169522601687 8.36446768350732 6.35493356016145 0.216049924397596 0.219321586283532 0.214044081531346 0.224600699697627 0.211359054596146 0.222400469331598 0.220815252999337 0.220065151665569 0.231281860241829 0.216430218307785 0.213882235782634 0.214961928345252 0.214309073940418 0.218137736387818 0.210378159714863 0.212579796489927 0.216272414551957 0.214619058944886 0.220246595745713 5 5|0 -|/ 26243560 26244223 26243931.556 26243058 26245675 - gene protein_coding_gene TRUE TRUE AT5G65630.1 DNA-binding bromodomain-containing protein similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT5G10550.1); similar to PSTVd RNA-binding protein Virp1a [Lycopersicon esculentum] (GB:AAG13810.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 1.68615877929944 15.9402501252487 9.76904039510923e-09 2.30194649420152e-06 17.9894091124445 15.1031277748993 1.68615877929944 0.113783677368284 AT5G03730_at 7.82307015234014 7.86319747054401 8.76372418915967 8.8204455337197 9.23828677081319 8.9873693154683 7.21481738141857 6.82279995110527 7.44272889441098 7.66309606302385 8.89556885566322 8.91232714543288 9.03797096066566 8.67374031604085 8.73672404642829 9.48464055868951 9.23990976662963 9.10719259016151 7.53622626786575 0.139594014746080 0.139647509272635 0.144211409960001 0.147273082993269 0.141909474439514 0.141783537989389 0.154525680780829 0.143049397183790 0.167289526843587 0.136751628726711 0.141188660062813 0.136586397763108 0.136586397763108 0.144680046463706 0.143831113879762 0.138483505193869 0.145691571286481 0.145688446223116 0.147377254255578 5 5|0 -|/ 974977 976078 975431.2 974498 979848 - gene protein_coding_gene TRUE TRUE AT5G03730.1|AT5G03730.2 CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase/ protein threonine/tyrosine kinase|CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. Identical to Serine/threonine-protein kinase CTR1 (EC 2.7.11.1) (CTR1) [Arabidopsis Thaliana] (GB:Q05609); similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G24480.1); similar to ethylene-responsive protein kinase TCTR1 [Lycopersicon esculentum] (GB:AAD46406.1); similar to CTR1-like protein kinase [Lycopersicon esculentum] (GB:AAR89820.1); similar to CTR1-like protein kinase [Rosa hybrid cultivar] (GB:AAK40361.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.49257204248432 15.9087703519103 9.96783190375601e-09 2.33609295371344e-06 17.9742679284682 16.4708936897698 1.49257204248432 0.0814395960670235 AT5G10790_at 5.46518646029115 6.35687866929282 7.40079705246798 7.41918540409771 7.45523607810267 7.34987196166308 4.93108421117457 4.83600631280354 3.93558823284106 4.04530590452488 5.71936815309076 6.07350008379306 5.62807171355329 5.74796685823451 5.64319954693046 5.7992235714787 5.58440973877039 5.4704227074038 3.28267939752457 0.269284014762417 0.264915733951966 0.284431737466233 0.268959460871684 0.267847315757585 0.268453932216836 0.266695759116591 0.265607520355218 0.274519543266908 0.277492401363799 0.262142773064460 0.264640182735847 0.272887295442894 0.268691568141196 0.267284891118829 0.262142773064460 0.268305614798265 0.283007408387717 0.276930970895959 5 5 + 3411969 3412535 3412202.182 3410540 3412634 + gene protein_coding_gene TRUE TRUE AT5G10790.1 UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G57990.1); similar to Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Zinc finger, UBP-type [Medicago truncatula] (GB:ABE86624.1); contains InterPro domain Zinc finger, UBP-type; (InterPro:IPR001607); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 1.98136474785952 15.8999437799900 1.00243598565457e-08 2.33671015972985e-06 17.9700143535556 11.1331781728802 1.98136474785952 0.156286138361773 AT5G66880_at 9.0515019846773 8.95336356837211 9.4999187278472 9.44261123648943 10.3011744205348 10.0107173240872 7.68320478872102 7.85620595334684 7.38655835342232 7.52715568648857 8.82836581420597 8.68484809588896 9.17581806952215 8.65784299697217 8.85730849700176 8.9250097422563 9.27261595171331 8.83257211883684 7.70418513037238 0.122065364131487 0.122242012409847 0.126528139276467 0.121369491490129 0.131721641617119 0.123552318692443 0.126733881159123 0.131858769972501 0.132453739131363 0.137809914264019 0.123754319899417 0.129963037058478 0.125933744359113 0.129966458409071 0.124834760437428 0.127624899163464 0.127548803006456 0.124989665782073 0.134782251955882 5 5|0 +|/ 26729178 26729830 26729562 26727781 26730196 + gene protein_coding_gene TRUE TRUE AT5G66880.1 SNRK2-3/SNRK2.3/SRK2I (SNF1-RELATED PROTEIN KINASE 2-3, SNF1-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth. similar to SPK-2-2 (SNF1-RELATED PROTEIN KINASE 2-2, SNF1-RELATED PROTEIN KINASE 2.2), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT3G50500.1); similar to Os03g0764800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051371.1); similar to serine/threonine protein kinase SAPK8-like protein [Solanum tuberosum] (GB:ABA40436.1); similar to Os03g0610900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050653.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.39626714541614 15.8756791622151 1.01815676805530e-08 2.36066406115790e-06 17.9583026375608 17.3216359426232 1.39626714541614 0.0617225666400406 AT5G06320_at 10.7279509444320 10.8008591776828 11.7130835807083 11.7886985469910 11.2605469183813 10.9320945962667 9.31311364432494 9.39992218349419 9.7766878522363 8.8854473730496 10.6083389721059 10.6607571582236 10.4043317713277 10.8750568943302 10.34345469388 9.84934592705998 10.2826460421505 10.4689192128312 8.38548280167924 0.117470304995164 0.111291089952474 0.117855993340192 0.116757831191477 0.118410005269628 0.115835906158859 0.123774387441264 0.115003964937990 0.130000047032069 0.136839202094687 0.111290580656010 0.111290580656010 0.111532430284215 0.112001918137541 0.114476996587238 0.115490238711292 0.115667800615897 0.115790609656628 0.146864222625859 5 5 - 1931028 1931574 1931348.455 1930794 1931769 - gene protein_coding_gene TRUE TRUE AT5G06320.1 NHL3 (NDR1/HIN1-like 3) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane. similar to NHL2 (NDR1/HIN1-like 2) [Arabidopsis thaliana] (TAIR:AT3G11650.1); similar to hin1 like protein [Capsicum chinense] (GB:BAD11071.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 1.39193904071847 15.8352796196982 1.04493117155568e-08 2.40709738770030e-06 17.9387429042311 20.468273203857 1.39193904071847 0.0615378792927486 AT5G61910_at 3.87875002946712 4.07743601692265 5.38233648963615 5.05055917243295 5.23726119503533 5.47803178057737 3.48575841946356 3.2517874543068 3.28311175322918 2.35950225343721 3.91018400517403 4.23628534217704 4.57039955659671 4.45960160739231 3.92420028138589 4.2559620438154 3.97914644465148 3.64280391720727 2.42396526366789 0.227846925375577 0.220225336859870 0.233450479292967 0.226539578631541 0.223548974945464 0.241555647984629 0.218507463344616 0.219054566466304 0.240511045310899 0.231861769310316 0.222172389474324 0.223030693700963 0.222647235626431 0.222347084073712 0.218514536057847 0.228722040472572 0.233995289798255 0.223129175261728 0.225227730494297 5 5 - 24878342 24878805 24878548.182 24877104 24881394 - gene protein_coding_gene TRUE TRUE AT5G61910.1|AT5G61910.2|AT5G61910.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32910.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94008.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22502.1); similar to Os06g0227200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057206.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain SUBFAMILY NOT NAMED (PTHR23230:SF1); contains domain no description (SM00767) 1.52353866120117 15.8288139646485 1.04928707511580e-08 2.40709738770030e-06 17.9356055044748 7.8858313980193 1.52353866120117 0.0886244676763848 AT5G46330_at 6.784887298937 7.17381050882218 7.0210870231017 7.21665240025086 8.48245203429528 7.82571940729064 4.79217607174841 4.82905986233351 7.11014640121796 6.16138347930889 8.97879257392808 9.03288100273345 8.54293277031629 8.53405281258127 8.45783223112755 9.46129262950578 7.88135699325604 8.63406740617022 7.07114143886284 0.256019838792451 0.259194403915911 0.269544291478401 0.260413713965238 0.261273218364614 0.268010505396831 0.257851108933559 0.257966646840522 0.267305781596632 0.263662837198933 0.255348077577295 0.255348077577295 0.260104141928827 0.260057745026296 0.264043808804838 0.255442143090103 0.266912047779518 0.263229376607321 0.264608786382855 5 5 + 18811967 18812522 18812216.182 18808963 18812773 + gene protein_coding_gene TRUE TRUE AT5G46330.1 FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor protein serine/threonine kinase Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. similar to EDA23 (embryo sac development arrest 23), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G44700.1); similar to Os04g0618700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053894.1); similar to H0313F03.16 [Oryza sativa (indica cultivar-group)] (GB:CAH68341.1); similar to OSJNBa0058K23.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE02151.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.82550244671506 15.8060313177030 1.06479429778898e-08 2.41388417064198e-06 17.9245349861247 14.5013763219719 1.82550244671506 0.136501108712617 AT5G12200_at 8.98516450484136 9.21004206062809 10.2024105044192 10.1296968671389 10.1390126137244 10.0915348708043 8.27267216095538 8.18096518060054 7.80918529325228 7.88747065806317 8.89161507857398 9.02256964977368 8.91796354450023 8.94260234754123 8.85846085632534 9.1931621866742 9.31109781244664 9.41409129644893 7.98424521303717 0.172095939356786 0.165415327029199 0.165964908508346 0.168597801650523 0.166454815895352 0.170293543346268 0.172781345650268 0.180442452975463 0.174860761751364 0.1836179784582 0.168671139911298 0.167443848011428 0.168251706688666 0.175990997442920 0.179656848211494 0.164842657847429 0.174628732173254 0.170294492600343 0.180384280103872 5 5|0 -|/ 3941724 3942724 3942088.375 3941529 3944812 - gene protein_coding_gene TRUE TRUE AT5G12200.1 dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) similar to ATALN (ARABIDOPSIS ALLANTOINASE), allantoinase/ hydrolase [Arabidopsis thaliana] (TAIR:AT4G04955.1); similar to putative dihydropyrimidine amidohydrolase [Oryza sativa (japonica cultivar-group)] (GB:BAB44078.1); similar to Metallo-dependent hydrolase, composite [Medicago truncatula] (GB:ABE77689.1); similar to Metallo-dependent hydrolase, composite [Medicago truncatula] (GB:ABE77695.1); contains InterPro domain Metallo-dependent hydrolase, composite; (InterPro:IPR011059); contains InterPro domain Dihydroorotase region; (InterPro:IPR005847); contains InterPro domain Amidohydrolase 1; (InterPro:IPR006680); contains InterPro domain D-hydantoinase; (InterPro:IPR011778) 1.32688218117499 15.8050360196439 1.06547743229085e-08 2.41388417064198e-06 17.9240508027027 17.8827268793822 1.32688218117499 0.0446338455959379 AT5G40690_at 4.3583837217685 4.91587183152393 7.33982014974597 7.7134903143947 6.41783238159654 6.16978770483875 3.07834984382527 2.69682331159806 2.96355514414795 2.67079989464402 3.14691518057004 2.67603057490491 3.01353808833959 3.3171910935789 3.06579955187376 3.43644485411739 3.97087162941829 3.8017474735023 2.61260128558348 0.250141248101101 0.254321353478276 0.243936100178609 0.253429656932493 0.243969623279864 0.245270428130035 0.239217915107724 0.244102987606152 0.252940029822590 0.252725394393873 0.246670383586726 0.240553255889775 0.247277578198399 0.244583859976852 0.244611061629701 0.242049095722174 0.248836025418057 0.246955670762783 0.245471276271088 5 5 + 16308069 16308336 16308180.545 16307939 16308811 + gene protein_coding_gene TRUE TRUE AT5G40690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41730.1) 1.85122866239736 15.7936251338344 1.07334368155058e-08 2.41388417064198e-06 17.9184964498745 8.36257128103478 1.85122866239736 0.140324929578245 AT5G62720_at 9.7144528204465 9.6448404869754 10.1051794274243 9.86864589403623 11.0227426010617 10.5180606969653 8.74373697844879 8.27737364737813 8.35851212906367 8.11567831780482 10.4552502883541 10.6155539219734 10.3855866397080 10.5255298987912 10.8401084659839 9.96938345698907 10.0628876819857 10.5503997708214 8.13227049588704 0.135478182105969 0.137582953151462 0.136699990783605 0.137287508652848 0.135456129780916 0.140825577155916 0.133532054713893 0.160453117286681 0.151255343637888 0.154461285173466 0.136640422040021 0.133491499688107 0.138128289983883 0.133491499688107 0.137781429509395 0.133491499688107 0.153360302049798 0.138497624206530 0.151317553378224 5 5|0 +|/ 25209343 25211851 25210125.8 25209068 25212235 + gene protein_coding_gene TRUE TRUE AT5G62720.1|AT5G62720.2 integral membrane HPP family protein similar to integral membrane HPP family protein [Arabidopsis thaliana] (TAIR:AT3G47980.1); similar to Os03g0684700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050921.1); similar to hypothetical protein [Oryza sativa] (GB:AAK14421.1); contains InterPro domain HPP; (InterPro:IPR007065) 1.75349501977518 15.7919334137741 1.07451527437537e-08 2.41388417064198e-06 17.9176724742193 19.0507496506726 1.75349501977518 0.126340876515232 AT5G63640_at 6.1601469847083 6.47162014354953 7.59546322329792 7.69393488639952 8.39375951031296 8.03045088288537 6.16933791526526 6.49791224721384 5.92136973821559 5.03632173314445 6.76952622938827 6.67295740131781 7.19084486660842 7.31583429195552 6.44232057649199 7.0290427784641 7.16427257759465 7.48712405199287 5.30884787391236 0.173429796993841 0.172717096683015 0.178089592863650 0.177695392364738 0.173270858512625 0.178417753517272 0.171848152668703 0.169057587123072 0.181440014531365 0.175484620258063 0.171539555638265 0.169806968688574 0.169057587123072 0.174895165451840 0.175863331470525 0.178410064949756 0.173938588335091 0.173103624764955 0.179388400436488 5 5 + 25497784 25498393 25498088.727 25494972 25498715 + gene protein_coding_gene TRUE TRUE AT5G63640.1 VHS domain-containing protein / GAT domain-containing protein similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76970.1); similar to GAT; ENTH/VHS [Medicago truncatula] (GB:ABE83690.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain VHS; (InterPro:IPR002014); contains InterPro domain ENTH/VHS; (InterPro:IPR008942) 1.59522918400447 15.7798131778894 1.08294999938549e-08 2.42029229281901e-06 17.9117652488220 13.3421632884462 1.59522918400447 0.101891794962103 AT5G52900_at 5.69925167405895 5.90978985461776 8.1264689686227 8.30757115562098 8.15936297595323 8.09185560700458 6.62426713555427 6.4546833968032 6.96522870982279 5.97014884340271 7.83565137792547 7.63721331695695 7.02245645082363 6.49335290095518 8.72351027687068 7.23780572218466 7.22621228183512 6.19109378625347 6.74645592388483 0.231965395085907 0.222067079906170 0.214658351910487 0.214658351910487 0.218178610458572 0.214658351910487 0.223083502787779 0.228488207287136 0.236340528460064 0.228019532596968 0.220317217544198 0.214658351910487 0.217319075618467 0.227843505402606 0.224372708450137 0.218706674772201 0.224267239733899 0.23461076965309 0.214658351910487 5 5 - 21470229 21470736 21470536.364 21469668 21471034 - gene protein_coding_gene TRUE TRUE AT5G52900.1 similar to hypothetical protein MtrDRAFT_AC150980g17v1 [Medicago truncatula] (GB:ABE87114.1) 1.36730875836535 15.7407981702090 1.11059553489840e-08 2.46625930400579e-06 17.8927033685933 14.0999179326607 1.36730875836535 0.0575104722025565 AT5G19430_at 6.22254453163979 6.29943977561935 7.45363987812937 7.41260966851546 8.17136408670633 7.80091990341955 6.14264932354006 6.2241774966921 5.94460535517374 6.57659760880917 7.7392081103495 7.42038067565841 7.91250525467483 7.75962521821151 7.35558527575 8.3786293888956 7.87036204522711 7.6742981572719 6.78497378458058 0.185500562931147 0.178429247440327 0.179695842060240 0.18893686671904 0.18428455635768 0.196101120182431 0.183643344312423 0.187435043775361 0.201208110685414 0.190241367173306 0.193146404243808 0.178041220455399 0.18748493182296 0.188104517368189 0.178758714977446 0.183700348964487 0.197071741484322 0.182880626042549 0.184457426865936 5 5|0 +|/ 6554936 6555582 6555278.3 6553827 6555833 + gene protein_coding_gene TRUE TRUE AT5G19430.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G12310.1); similar to Os01g0954400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045432.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.40793130927677 15.7314202525666 1.11735476439608e-08 2.46625930400579e-06 17.8881109117502 14.0655263406708 1.40793130927677 0.0673518641642181 AT5G38210_at 5.4265029475062 5.55503579810839 7.35886174297556 7.67663717664428 6.69042512315347 6.01514068826428 4.06438439913913 4.07706168355067 3.49704068171369 3.24027382185559 4.99548623588374 4.87049504173673 4.9611789000623 5.19253839366079 3.91680620197709 5.08587199910208 5.23165129795788 3.78080032788309 3.31772180067522 0.256577475367034 0.251662939884508 0.253499837000953 0.256592010060476 0.254662015060779 0.254818941008932 0.248502341314927 0.250940283757055 0.260818697369375 0.258254824710206 0.253988909629124 0.248502341314927 0.248502341314927 0.257631244987349 0.252703854286799 0.248703166936551 0.250348631355323 0.249899137712859 0.257799427417278 5 5 + 15282050 15282582 15282309.364 15278235 15282860 + gene protein_coding_gene TRUE TRUE AT5G38210.1 serine/threonine protein kinase family protein similar to serine/threonine protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66880.1); similar to wall-associated kinase 4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82479.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.77859737869238 15.7269638766080 1.1205824601777e-08 2.46625930400579e-06 17.8859271369149 9.91102235384998 1.77859737869238 0.131073537793395 AT5G63120_at 5.88319752559117 5.51355545111416 6.82590708995361 6.89934279605102 6.93592079232093 6.7378016163527 5.71929455799066 5.60881736267274 3.98166889634146 3.99137724426503 5.48246868568453 5.15104611800433 5.4800256580641 5.92166267251714 5.9424605109539 5.43551435847222 6.19535988359308 5.57687158156918 3.81381102789475 0.227257262672593 0.225123254908747 0.225632348862275 0.225305031336577 0.228737044574203 0.23286285054899 0.224411956016368 0.227807177666063 0.256631198686425 0.235935374697985 0.233229306688289 0.224411956016368 0.224411956016368 0.227441974680810 0.232414921535472 0.224411956016368 0.235396317106383 0.232782347008566 0.233817887172989 5 5|0 -|/ 25337180 25338060 25337581.875 25335978 25339491 - gene protein_coding_gene TRUE TRUE AT5G63120.1|AT5G63120.2 ethylene-responsive DEAD box RNA helicase, putative (RH30) Identical to DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.1.-) (RH30) [Arabidopsis Thaliana] (GB:Q8W4R3;GB:Q9FML1;GB:Q9ZRZ7); similar to DEAD box RNA helicase, putative (RH20) [Arabidopsis thaliana] (TAIR:AT1G55150.1); similar to Os01g0911100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045158.1); similar to putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD82427.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629)|Identical to DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.1.-) (RH30) [Arabidopsis Thaliana] (GB:Q8W4R3;GB:Q9FML1;GB:Q9ZRZ7); similar to DEAD box RNA helicase, putative (RH20) [Arabidopsis thaliana] (TAIR:AT1G55150.1); similar to DEAD box RNA helicase [Zea mays] (GB:AAR29370.1); similar to putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD82427.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 1.44387532171714 15.6743604441376 1.15946078374156e-08 2.53893753575155e-06 17.8600791670878 11.0540439355597 1.44387532171714 0.0761213322587514 AT5G24030_at 3.54555671969409 3.80620830920545 5.73075272316209 6.18607833789312 6.70699871937884 6.58268879892742 5.80152009254685 6.15125823612333 5.57888122812468 5.71702942495591 7.88170845978775 6.58299499705535 7.15210312381229 7.49026595898277 6.53080466800549 6.87229347153318 7.24972987952233 7.67116868223186 4.83085258045025 0.186183091787294 0.182742778664875 0.18440415850103 0.179431702963314 0.175600586723135 0.183992638352728 0.182294936783213 0.182256175070268 0.185642441285199 0.174619042723017 0.180263121769413 0.174146241868802 0.178223326248345 0.189642800817325 0.175871932806505 0.173951330530948 0.186709745893528 0.175735238821803 0.186305066607459 5 5|0 -|/ 8118679 8119368 8119041.889 8118320 8122787 - gene protein_coding_gene TRUE TRUE AT5G24030.1 C4-dicarboxylate transporter/malic acid transport family protein similar to C4-dicarboxylate transporter/malic acid transport family protein [Arabidopsis thaliana] (TAIR:AT4G27970.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81510.1); similar to Os01g0385400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043099.1); similar to Os05g0219900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054944.1); contains InterPro domain C4-dicarboxylate transporter/malic acid transport protein; (InterPro:IPR004695) 1.63939485802702 15.6515593548562 1.17676771980807e-08 2.55982900735407e-06 17.8488347845726 11.8411184419297 1.63939485802702 0.111217803244888 AT5G48370_at 6.87868768945593 7.16708701133145 7.79830376409077 7.73195984652396 7.8344859609529 7.79460897794029 6.34560468022387 6.66850279200062 5.55044532499092 5.62890305842167 7.75970567278665 7.24560342790842 7.08616762019512 7.66999670930473 7.11202775055889 7.4126193502244 7.35709331822018 7.37319295379308 5.37899543294307 0.180443076724426 0.181464226752789 0.182884430023633 0.185663155850442 0.180175588282784 0.184940206657587 0.180025513624076 0.178406224939763 0.207997904434197 0.192680496557072 0.181790855075889 0.173653694778405 0.178221317948411 0.173653694778405 0.180477180602509 0.179777646736044 0.175055503222683 0.182407212194465 0.186407043989406 5 5 - 19615951 19616656 19616363.545 19615749 19617870 - gene protein_coding_gene TRUE TRUE AT5G48370.1|AT5G48370.2 thioesterase family protein similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT2G30720.1); similar to Thioredoxin/protein disulfide isomerase (ISS) [Ostreococcus tauri] (GB:CAL54247.1); similar to Os09g0517700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063681.1); contains domain Thioesterase/thiol ester dehydrase-isomerase (SSF54637); contains domain ACYL-COA THIOESTERASE (PTHR12655); contains domain no description (G3D.3.10.129.10) 1.44123600285636 15.6462872779447 1.18080942067402e-08 2.55982900735407e-06 17.8462313552239 13.7256544848945 1.44123600285636 0.0761104265457164 AT5G66210_at 6.29372460945599 6.5339571633225 7.55216829431732 7.39544252099418 6.98936313906099 7.25898429726192 4.43958653730779 4.55187757649428 5.56762702706276 4.78245485910546 6.50723025646672 5.96083648251702 5.57586220988014 6.4981729292625 5.88222218805102 5.8723349581801 5.91768766360074 5.96533325872467 4.76153067273034 0.222243446359884 0.228147474568846 0.232259544684845 0.229526726183222 0.235628398634172 0.229324602298543 0.229166430046602 0.251064006524911 0.239796187419131 0.230961606671256 0.227493921657092 0.222243446359884 0.22650243778586 0.223630399436676 0.228083257849831 0.226697027556765 0.228346436343715 0.231104139930660 0.226420758125620 5 5|0 -|/ 26473916 26474858 26474396.778 26473517 26476850 - gene protein_coding_gene TRUE TRUE AT5G66210.1|AT5G66210.2|AT5G66210.3 CPK28 (calcium-dependent protein kinase 28); calcium- and calmodulin-dependent protein kinase|CPK28 (calcium-dependent protein kinase 28) member of Calcium Dependent Protein Kinase similar to CPK18 (calcium-dependent protein kinase 18), calcium- and calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT4G36070.1); similar to CPK16 (calcium-dependent protein kinase 16), calcium- and calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G17890.1); similar to calcium-dependent protein kinase [Nicotiana tabacum] (GB:AAX81331.1); similar to calcium-dependent protein kinase CPK4 [Nicotiana tabacum] (GB:AAL30819.1); similar to calcium-dependent protein kinase CDPK1444 [Medicago truncatula] (GB:AAX14494.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.41472944914965 15.6304515628171 1.19304078245508e-08 2.57347749461776e-06 17.8384035301429 11.9067201070943 1.41472944914965 0.0708424783099678 AT5G33290_at 8.65112870813175 8.7554882438815 9.41743639746587 9.23234776802165 9.39020834648528 8.88584943706787 5.28543971935602 5.33371497211521 5.64727625868208 5.06106453936337 5.47048923708132 5.62123771696744 6.1307083912061 6.38884469022257 5.56135475527195 6.60737649572627 6.40013568276694 6.03335536057834 4.81432195833489 0.257292078477726 0.255627521075107 0.256675435698695 0.256810523564035 0.256591076853429 0.261104311319587 0.250982211050269 0.250982211050269 0.258227463316367 0.250982211050269 0.252402452812792 0.250982211050269 0.250982211050269 0.250982211050269 0.251673400462383 0.250982211050269 0.250982211050269 0.252328720633899 0.263793400107872 5 5 + 12578507 12578988 12578744.636 12575486 12579250 + gene protein_coding_gene TRUE TRUE AT5G33290.1 XGD1 (XYLOGALACTURONAN DEFICIENT 1); catalytic similar to catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G42180.1); similar to exostosin family protein [Capsella rubella] (GB:ABA18105.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 1.53874222441161 15.6135107139674 1.20627892933259e-08 2.58915180746301e-06 17.8300162527985 13.7194060540762 1.53874222441161 0.0950788723351189 AT5G24500_at 6.7209260538962 6.92826470075529 8.06971573347807 7.9784820966658 8.50029420576803 8.24057165834453 6.61871558587442 6.38410797697987 7.20357233355853 6.18969707799985 8.29838596883788 8.17683814247423 8.14545056427437 8.06396700436822 7.70507656827503 8.14120323100962 7.63485480887623 7.51462233416384 6.58960366210068 0.225134017703701 0.230799692745279 0.229848667947569 0.230154329667644 0.232052751049881 0.226233194887983 0.237040806795987 0.23192445804526 0.234175942865519 0.254322049258398 0.225134017703701 0.225134017703701 0.228361749650376 0.231940390515263 0.237656169281569 0.225134017703701 0.243524743433197 0.243549479313833 0.23462974228724 5 5|0 -|/ 8368088 8368341 8368255.556 8367305 8368739 - gene protein_coding_gene TRUE TRUE AT5G24500.1 similar to Os06g0316100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057496.1) 1.41667724037645 15.5850245291695 1.22890165623038e-08 2.62471548830227e-06 17.8158822096242 14.7406385109726 1.41667724037645 0.0721472806740472 AT5G49950_at 7.46071389991666 7.46851594739615 8.66485550144215 8.53269042218803 8.28971039167736 8.38175168025862 7.26737525023306 7.33275143673327 5.66638779725886 6.2802940778913 7.69741207380776 7.64891351845085 7.58254282289376 7.67502779077263 6.93983395366141 7.92660010643478 7.45426095177389 7.65750338313709 6.41698968124424 0.20223922386773 0.195004024614796 0.196201542254456 0.206263935412170 0.198596014987213 0.193936879898972 0.195501780256730 0.195463909821221 0.224241909020857 0.208553575847750 0.199070196044913 0.193261973503871 0.196087553020397 0.200459103217838 0.202166209293963 0.189755456202413 0.215922939761531 0.19582718476483 0.197045467601129 5 5|0 -|/ 20337130 20338436 20337630.4 20336959 20340842 - gene protein_coding_gene TRUE TRUE AT5G49950.1 embryogenesis-associated protein-related similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G34340.1); similar to Embryogenesis-associated protein EMB8 (GB:Q40863); similar to Os05g0432600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055633.1); similar to Os01g0871100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044934.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 1.26822541915341 15.5663206414521 1.24400710133839e-08 2.64395363178392e-06 17.8065808310078 14.7717884048547 1.26822541915341 0.0301105789249654 AT5G18640_at 7.61493356581298 7.84041806379594 9.01661277042924 9.01683293822597 10.0385819983116 9.43442316743385 7.08737184144772 6.53239405193283 7.1777361303677 7.30067972104635 9.32062891640201 8.75054329313931 8.95187320666387 9.06091886793964 8.71205933342538 9.12238462081245 8.7960147722615 8.96124960830496 7.53626643967645 0.194356787051194 0.186994094955635 0.196133320800618 0.190237517027906 0.184032694300101 0.188498570190795 0.197067509194979 0.192913897048220 0.200588050560013 0.192862211037500 0.184032694300101 0.184032694300101 0.189490880600951 0.189887324010589 0.185206962643531 0.184032694300101 0.197825173847581 0.190117840270758 0.192181005152136 5 5 + 6214458 6215470 6214962.182 6213249 6215784 + gene protein_coding_gene TRUE TRUE AT5G18640.1 lipase class 3 family protein similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18630.2); similar to Os05g0372400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055362.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 1.86453249242897 15.4893775052076 1.30831218483562e-08 2.76706058079837e-06 17.7681410201680 16.4715393035398 1.86453249242897 0.147233983207664 AT5G12170_at 5.76397224008822 5.73660417735869 7.12796759205182 6.7834511308435 6.77363749618904 6.61628952323621 5.62221915142404 5.65155698841648 5.10667986616909 5.19059111937139 6.45199078084394 7.14700718178332 7.11974635122479 6.74717323396707 6.46532167902899 7.28752061314694 7.07280286437877 7.10387232537797 5.60153637792432 0.139474126939436 0.136240783700122 0.143163652686136 0.141187323680547 0.139574331098004 0.145397885763365 0.139566086785478 0.138916993168167 0.15333959446233 0.148759173967825 0.137331315399788 0.135981308795459 0.141417255583828 0.145251633645228 0.141564585185879 0.139573883623701 0.139784066949280 0.142297639720832 0.142123977902605 5 5|0 +|/ 3931702 3934925 3933229.095 3931563 3935130 + gene protein_coding_gene TRUE TRUE AT5G12170.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19380.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE77682.1) 1.37828761024450 15.4704668642603 1.32466596502441e-08 2.77236669156247e-06 17.7586498958273 12.3714782040546 1.37828761024450 0.0659108162039897 AT5G08550_at 5.73023163719652 5.76473055615665 6.92412420437781 6.99449709505676 6.75003003512864 7.20859602344693 5.60906583938373 5.2890817838822 4.57783603767145 4.3955688437933 5.92875877382788 6.29347989168717 6.24386484726335 6.08050979001394 6.18288946541477 6.25241058616289 6.39844874861467 5.8956779448275 4.38338250600451 0.217725659190949 0.215392934570139 0.214024208436519 0.214024208436519 0.220730928754234 0.225399591963941 0.214024208436519 0.226829706539783 0.234352600214846 0.21923137607233 0.216683483740019 0.214024208436519 0.220393614392072 0.214024208436519 0.215956805241751 0.214024208436519 0.217287005183773 0.223146181428913 0.221663421872190 5 5 - 2766023 2767064 2766694.455 2765643 2770283 - gene protein_coding_gene TRUE TRUE AT5G08550.1 ILP1 (INCREASED LEVEL OF POLYPLOIDY1-1D); translation repressor Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G09210.1); similar to PREDICTED: similar to GC-rich sequence DNA-binding factor homolog [Danio rerio] (GB:XP_691721.1); similar to Os03g0853700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051931.1); contains InterPro domain GC-rich sequence DNA-binding factor-like; (InterPro:IPR012890) 1.53913846441727 15.4654240393637 1.32906452501194e-08 2.77236669156247e-06 17.7561160180879 11.5896783810618 1.53913846441727 0.0977130874804955 AT5G15710_at 6.28942404827268 6.64393268282274 7.47411935573576 7.48009336225554 8.00112031373332 8.16876457067385 6.0648186132961 6.11126275752452 5.82718241037057 6.00962382365822 7.46047309442712 6.91164841817173 7.09228741063883 7.29372913351715 7.06014066154044 7.4093045660158 7.48796510339061 6.82789275978008 5.92242778358473 0.219055740450955 0.208594157211554 0.210464321419678 0.206679531012254 0.215031952576225 0.212720220431584 0.208676308303872 0.213823015190789 0.219155991774241 0.225120823896495 0.206679531012254 0.207518280868539 0.213456600178772 0.215455512224325 0.211161191575724 0.206679531012254 0.209000132669376 0.211413490909934 0.213181969783628 5 5 + 5123569 5124073 5123830.182 5122495 5124376 + gene protein_coding_gene TRUE TRUE AT5G15710.1 F-box family protein similar to UFO (UNUSUAL FLORAL ORGANS), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G30950.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96837.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 1.38842517300899 15.4643496046113 1.33000374847589e-08 2.77236669156247e-06 17.7555759859208 13.5855293710258 1.38842517300899 0.0683453572178241 AT5G03660_at 8.43910865567016 8.4711911588084 9.4586992131291 9.49232199020849 9.87590892792232 9.55079781319628 8.41617531167912 8.50557279919297 7.9263788177901 8.00912903012776 9.7607187216121 9.66435876631402 9.16613107772894 9.61640953241498 9.28817606350721 9.68295865626314 9.51329169553009 9.30539002177082 7.8845139865241 0.169114892954055 0.163318790605962 0.166119845998083 0.167362176426812 0.163318790605962 0.171430394570898 0.168571059523052 0.165792616190234 0.182892379513979 0.179525383942217 0.172564577124393 0.167050615807387 0.164302281991986 0.167367415143748 0.170924562715166 0.165693298397236 0.168199888675947 0.169472895195813 0.172328396987839 5 5|0 +|/ 938100 939785 938422.778 937976 940057 + gene protein_coding_gene TRUE TRUE AT5G03660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09980.1); similar to Os04g0408600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052720.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79606.1); similar to OSJNBa0042I15.15 [Oryza sativa (japonica cultivar-group)] (GB:CAE04893.2); contains InterPro domain Protein of unknown function DUF662; (InterPro:IPR007033) 1.34804602176086 15.456448459574 1.33693285775967e-08 2.77347626327581e-06 17.7516029985145 17.7460652812458 1.34804602176086 0.0589019013014821 AT5G63680_at 8.20420064925508 8.42193651589694 9.50337232122265 9.36399427284464 9.11927320379677 8.82615753564104 7.22184813622163 7.34193963190896 6.38455489688553 6.63007296564253 7.71769585970065 7.78478293100973 7.79669181568624 7.65198287929022 7.77798690324065 7.7341424070237 7.76288187765255 7.76209052355799 6.0642732384661 0.188291630249153 0.180501193270349 0.179711351972344 0.180307767719608 0.186097098714086 0.187030073518839 0.177565028771391 0.182225844254497 0.195615479347487 0.196618491773125 0.180117032086376 0.180300402690731 0.177639412164209 0.176392981332848 0.181081977366429 0.176392981332848 0.182555799710406 0.188115908714123 0.192994696956581 5 5 + 25509177 25509572 25509392.455 25507299 25509978 + gene protein_coding_gene TRUE TRUE AT5G63680.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56350.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:AAM94349.1); similar to pyruvate kinase [Glycine max] (GB:AAM94348.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42806); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 1.39730814968473 15.4423030208488 1.34943660943423e-08 2.77654953822729e-06 17.7444825986543 15.5544230833368 1.39730814968473 0.0707566981487297 AT5G61760_at 7.37344705550127 7.2781799594008 8.2530292912056 8.34515450516325 8.02266207718457 7.7857629890974 7.11257215524124 7.23376227483328 5.07586555341618 6.56333652665189 7.68061571529847 7.90382928591466 7.79643809147489 7.18372791842606 7.40595408319798 7.67920897092245 7.9508576441168 7.4720144777175 5.906650370376 0.194092741731599 0.197259454147022 0.199656969665316 0.193331394174619 0.196532962592028 0.192982633273572 0.189920362380217 0.194958019601152 0.227382372345977 0.19450317521522 0.189920362380217 0.193991090736894 0.193470904974804 0.195378584842191 0.189920362380217 0.189920362380217 0.194220661545009 0.200909536227465 0.205127285961211 5 5 - 24831142 24831711 24831381.455 24830955 24832669 - gene protein_coding_gene TRUE TRUE AT5G61760.1 ATIPK2BETA (Arabidopsis thaliana inositol hexakisphosphate 2beta); inositol or phosphatidylinositol kinase Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2). similar to IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G07370.4); similar to putative inositol polyphosphate kinase [Thellun (GB:ABL11220.1); contains InterPro domain Inositol polyphosphate kinase; (InterPro:IPR005522) 1.31881257216040 15.4402947748357 1.35122209866901e-08 2.77654953822729e-06 17.7434709201532 14.4169204168859 1.31881257216040 0.0514444386571156 AT5G60790_at 8.61620964818834 8.66579205163502 9.78901628460852 9.82936654059447 9.57763839514538 9.23678883299945 9.09195778725406 8.96793535463125 7.50493880432183 7.23695092970719 9.03566254949936 9.36634395212628 9.26595097043295 8.84891378266905 9.34571767109393 9.06836566717077 9.2348393831765 8.73982300669359 6.7223086540225 0.152441852334702 0.143041501804981 0.151314967755584 0.151536447731728 0.148097869410039 0.152060703289527 0.148430424371592 0.149254635357452 0.156607458413900 0.174492845828358 0.147942392086757 0.147700301950342 0.143041501804981 0.148693037277629 0.145320719231629 0.146775559937793 0.151564763961515 0.143917978848256 0.184382392487902 5 5 - 24471096 24471553 24471310.364 24470484 24473196 - gene protein_coding_gene TRUE TRUE AT5G60790.1 ATGCN1 (Arabidopsis thaliana general control non-repressible 1) member of GCN subfamily similar to ATGCN4 (Arabidopsis thaliana general control non-repressible 4) [Arabidopsis thaliana] (TAIR:AT3G54540.1); similar to ABC transporter homolog [Populus nigra] (GB:BAA94511.1); similar to ATP-binding cassette transporter [Pteris vittata] (GB:AAS77222.1); similar to PREDICTED: similar to CG9281-PB, isoform B [Tribolium castaneum] (GB:XP_966990.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.36559906487521 15.4319955722614 1.35862811933784e-08 2.77859903362258e-06 17.7392880200655 17.3558055713195 1.36559906487521 0.0637364216653072 AT5G52870_at 3.04529930165431 3.48624190729825 5.18521699745665 5.88958546430407 4.8508436880013 5.18214875635549 2.67066311476329 2.78730262814218 2.33378505893152 2.43497379598569 3.55226899005788 4.01267642733354 3.79191937006980 3.466649241072 4.5941585376978 4.09355792867286 4.61995955949788 3.86225130685608 2.58404107671605 0.218648061790957 0.209465377793434 0.215184649889552 0.211145663720136 0.215587896793314 0.213953922054829 0.214570700689912 0.213305698235265 0.217041929691852 0.226975814394815 0.214442709201358 0.214531823044580 0.209009204532665 0.218130115767069 0.217031806989967 0.211841661223091 0.229228481031725 0.213235600684210 0.210584307331543 5 5 - 21445614 21446178 21445891.273 21445173 21446671 - gene protein_coding_gene TRUE TRUE AT5G52870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64080.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83069.1) 1.91390942408884 15.3679422565598 1.41729989734267e-08 2.86693202855747e-06 17.7068916023233 7.36221947259776 1.91390942408884 0.156126877691156 AT5G02630_at 4.71239207998818 5.11646527038778 6.33734016340542 6.63204468616891 6.44525591455339 6.73891883626615 4.47004591080442 4.71646600732914 4.08570673097511 4.18251720597187 5.43956857086703 5.54775253215715 5.26265294075807 5.33881661945608 5.40354524948969 5.55256264986474 5.50385885063245 5.23008929709459 3.73782527270657 0.252362656637375 0.241249833066124 0.24571997152995 0.246197240413863 0.241978065695351 0.255075142236685 0.242369366276097 0.252060115559861 0.264765141783024 0.251312761445799 0.257907385914834 0.253437545941246 0.24815190824454 0.241974944229280 0.250014109683654 0.241249833066124 0.248516768450853 0.253549084205909 0.246965857655741 5 5 + 592509 592969 592711.545 591769 593185 + gene protein_coding_gene TRUE TRUE AT5G02630.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18520.1); similar to putative lung seven transmembrane receptor 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD21602.1); similar to Os01g0836800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044733.1); similar to Os05g0462500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055767.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 1.59619350927161 15.3660418403876 1.41908233700717e-08 2.86693202855747e-06 17.7059273651476 10.3520522296168 1.59619350927161 0.109050073990268 AT5G67520_at 5.81644421579742 5.38587916873137 8.88304196257136 8.64638242524532 9.0368923162996 8.62422512922995 6.91082255789911 6.53568424825267 7.99755747082387 6.9713876504346 8.21014396402663 6.86309556882514 8.03518114104103 8.65941731103418 6.80256900734418 9.421273109476 8.71165683038176 7.78262416180183 6.79328925979093 0.225008447034759 0.214709544128776 0.218339482380289 0.213760792948784 0.217511044978960 0.209552615756312 0.207069771301235 0.207093138708044 0.210456347305172 0.212391121395399 0.206576500258297 0.205762384222287 0.2033480298596 0.205687576153115 0.210993166630166 0.216312065256039 0.204112232240505 0.209419836922221 0.2033480298596 5 5 + 26957204 26958035 26957554.909 26956385 26958172 + gene protein_coding_gene TRUE TRUE AT5G67520.1 adenylylsulfate kinase, putative similar to AKN2 (APS-KINASE 2), ATP binding / kinase/ transferase, transferring phosphorus-containing groups [Arabidopsis thaliana] (TAIR:AT4G39940.1); similar to Adenylylsulfate kinase [Medicago truncatula] (GB:ABE85872.1); contains InterPro domain Adenylylsulfate kinase; (InterPro:IPR002891) 1.72104746019565 15.3633017522942 1.42165662760256e-08 2.86693202855747e-06 17.7045367823288 15.1373331348823 1.72104746019565 0.128622458901683 AT5G45310_at 4.84788669109703 5.28028679553103 7.25427149557705 7.3383687482818 8.42422908929756 8.2903878173641 5.01612506814387 5.69419007924266 3.08209214509711 4.63473600692821 4.86194070889054 4.08581957742535 5.99952618126956 4.94866459555552 4.14219485716466 5.15545888920621 6.93168443947856 5.25268128499121 4.80935662462378 0.244275989840870 0.243711442732717 0.248381414126309 0.253146308031146 0.244727259541898 0.239033657946148 0.241528805926618 0.242994128103466 0.264649018673070 0.238901673846274 0.239660834397633 0.238901673846274 0.238901673846274 0.242151330069405 0.243156069577853 0.241710132749665 0.247645920928094 0.241767417313312 0.242100350668295 5 5 - 18376611 18377011 18376793.545 18376502 18378341 - gene protein_coding_gene TRUE TRUE AT5G45310.1 similar to Os01g0962100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045475.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84156.1); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) 1.80702176016224 15.3269590178824 1.45628642465290e-08 2.92317080349172e-06 17.6860581912427 11.1920388442156 1.80702176016224 0.141833879881005 AT5G48380_at 10.2729079811206 10.5039310230796 11.0548192662742 11.1181544960635 10.7178666743805 10.4741413251502 6.70729574685739 7.25318664779324 8.88958630780233 7.6492100024159 9.25326826498594 9.68285793168275 8.53537737338617 9.17635811024835 8.90364150617965 9.0384913360899 8.76745554298937 9.35744304500619 7.56554097000243 0.152749564319722 0.150815215172786 0.150815215172786 0.153827172563813 0.150815215172786 0.153541414407661 0.172831939834293 0.168703941558819 0.157817613743856 0.166581009621810 0.150836205049106 0.150815215172786 0.159257022765286 0.152574861940632 0.151325618058779 0.150815215172786 0.152932896678965 0.150815215172786 0.172086065735116 5 5 - 19621851 19622380 19622123.909 19621315 19624285 - gene protein_coding_gene TRUE TRUE AT5G48380.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.60574881808428 15.3164995510619 1.46642261442308e-08 2.92995235373773e-06 17.6807280175638 18.3248582612039 1.60574881808428 0.11145337294122 AT5G05840_at 4.52867428782549 5.0407014070782 6.83842142140941 6.73350916959807 7.44499136167694 7.192823592114 6.17164223912423 6.40555534681406 4.15094707605534 5.42226571081425 6.75695384358648 6.33185238527827 7.00828114904222 6.3684292099121 6.4061721894037 6.00989719035401 6.3734411146191 6.03616305494544 4.70634408811784 0.180739086419101 0.176623919617358 0.179457651346347 0.171494332353079 0.181951241451159 0.177197911699316 0.184748982915498 0.173627005585477 0.211456537208803 0.179813364632274 0.171494332353079 0.171494332353079 0.180704983835597 0.186260444122316 0.176037754883902 0.178881784826014 0.180255161074305 0.175494367066857 0.186111459682814 5 5 - 1757329 1757787 1757571.545 1757099 1760667 - gene protein_coding_gene TRUE TRUE AT5G05840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55720.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06886.1); similar to Os03g0267500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049665.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) 1.58366977073465 15.2905012519618 1.49195226024312e-08 2.9665003199417e-06 17.6674558686110 11.8801653826076 1.58366977073465 0.108277784515697 AT5G52450_at 7.37965948493546 7.30674567302822 9.3237184244849 8.95936420558273 9.5074639514938 9.01459711759263 7.44369213499674 7.2234263693609 4.70671592752865 5.73987624346112 5.9004270668117 4.88145125118143 7.34152045529954 6.48111094895548 5.23528423666375 7.70215940100559 7.7462435298179 6.23719453119383 4.77926297432794 0.241376338884630 0.239810468897867 0.240221330883929 0.247428767677898 0.240416337038662 0.250917689001257 0.244797459592939 0.236667033988817 0.256127572602416 0.236667033988817 0.246069221057327 0.240122960171919 0.241044768495706 0.24213974718280 0.242848845390682 0.24196145973995 0.239609773130673 0.241404779888262 0.253555270092949 5 0|5 /|- 21306450 21307165 21306777.333 21306124 21309088 - gene protein_coding_gene TRUE TRUE AT5G52450.1 MATE efflux protein-related similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G34360.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G73700.1); similar to Os04g0373400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052573.1); similar to MATE efflux family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65963.1); similar to Os06g0494400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057687.1); contains InterPro domain Virulence factor MVIN-like; (InterPro:IPR004268); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 1.61414694419255 15.2811640024071 1.50123917022364e-08 2.9665003199417e-06 17.6626810563323 14.0278129082121 1.61414694419255 0.113414215460362 AT5G51180_at 7.43331348511357 7.15438922963325 8.32733479378916 8.28052759491842 8.59175765432101 8.64204496774373 6.91606273648448 6.90699478276587 5.70516455772112 6.4788306665356 7.40585684177956 7.58532932968747 7.63296832687057 7.21260255233806 7.34983070929198 7.02345719855209 7.75756106086051 6.789146619904 6.12882739268845 0.206983392644213 0.209735477598979 0.213630790388798 0.212769264324098 0.219574854114792 0.223019200864849 0.210173548871987 0.224459779602670 0.21258341590041 0.215266958247568 0.211299244983689 0.206983392644213 0.214409032632328 0.218969705343952 0.212842078858099 0.209269832565927 0.213457060600657 0.222219250145988 0.222790853419427 5 5|0 +|/ 20815503 20817130 20816325.375 20814243 20817440 + gene protein_coding_gene TRUE TRUE AT5G51180.1|AT5G51180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25770.1); similar to Os03g0726800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051137.1); similar to putative protein [Oryza sativa] (GB:CAC39063.1); similar to Os08g0143700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060979.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Protein of unknown function DUF676, hydrolase-like; (InterPro:IPR007751) 1.29902303422796 15.2771602348407 1.50524064911053e-08 2.9665003199417e-06 17.6606323199713 14.5059872983756 1.29902303422796 0.0497364931970863 AT5G35840_at 6.74448333560132 6.63959016831285 7.84806068928726 7.71314117436341 8.2110162571726 7.98983184777523 6.73875745886192 6.54938343247316 6.24408752536704 6.64606907149694 7.99324288970346 7.95467974356462 7.88638793368834 7.68582223583143 7.84956301851185 8.12482130610908 8.01843712901147 7.13786959333309 6.49284389192044 0.196490723706885 0.190542354770811 0.194302577192615 0.202837898016875 0.19443836156409 0.224366099931145 0.199661591561629 0.193632693746773 0.226409596638596 0.203307737942107 0.19988233919072 0.197577258328123 0.192007377546984 0.201428711779683 0.189200650946034 0.196284908124402 0.210526935653618 0.202373303446810 0.201967377846520 5 5 + 14028167 14028822 14028535.818 14025056 14028994 + gene protein_coding_gene TRUE TRUE AT5G35840.1 PHYC (PHYTOCHROME DEFECTIVE C) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development. Identical to Phytochrome C (PHYC) [Arabidopsis Thaliana] (GB:P14714); similar to PHYA (PHYTOCHROME A), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT1G09570.1); similar to PHYD (PHYTOCHROME DEFECTIVE D), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT4G16250.1); similar to PHYB (PHYTOCHROME B), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT2G18790.1); similar to phytochrome C [Oryza sativa] (GB:AAF66603.1); similar to phytochrome F [Lycopersicon esculentum] (GB:AAC49301.2); similar to phytochrome C [Triticum aestivum] (GB:AAU06208.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Phytochrome, central region; (InterPro:IPR013515); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain PAS fold-2; (InterPro:IPR013654); contains InterPro domain GAF; (InterPro:IPR003018); contains InterPro domain Phytochrome; (InterPro:IPR001294); contains InterPro domain Phytochrome A/B/C/D/E; (InterPro:IPR012129); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain PAS fold; (InterPro:IPR013767); contains InterPro domain Phytochrome chromophore binding site; (InterPro:IPR013516) 1.32140585581417 15.1719903066608 1.61463006811969e-08 3.16768439022551e-06 17.6065315876470 14.4504596175546 1.32140585581417 0.0584276516689337 AT5G48960_at 5.05517251155744 4.60938974685363 5.07552150165884 4.68218207727578 5.85090132546986 5.53808176229185 2.98809423569017 2.38300698657511 2.18734011613381 3.4430410519503 5.18516627364588 6.01494626903967 5.18586095740865 4.82342255340701 6.12244245149177 4.61918393997715 4.89972012930659 4.57940667017942 3.17259535753084 0.228902158955136 0.220124640963265 0.220124640963265 0.224631385984281 0.220124640963265 0.234061014982609 0.221994153728739 0.227427930560236 0.224581123169369 0.225318379520431 0.220124640963265 0.222451450989358 0.220124640963265 0.228329183437212 0.241989865291110 0.220291435789037 0.226674686872377 0.225734766520894 0.228065807777050 5 5|0 +|/ 19869340 19870573 19869857 19866769 19870790 + gene protein_coding_gene TRUE TRUE AT5G48960.1 5' nucleotidase family protein similar to 5' nucleotidase family protein [Arabidopsis thaliana] (TAIR:AT1G75210.1); similar to HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase [Myxococcus xanthus DK 1622] (GB:YP_635204.1); similar to Os01g0250900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042597.1); contains InterPro domain HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase; (InterPro:IPR008380) 1.88609947176185 15.125375974587 1.66586223883812e-08 3.25347333601254e-06 17.5823758418380 8.57934085046925 1.88609947176185 0.156461403600914 AT5G07290_at 6.6825794469639 6.64865731198243 7.7063350989078 8.11880114553381 7.78072884224458 7.61798917812653 6.22382058151544 6.5890570529246 5.92003443943895 6.09132048852062 7.86210006919214 7.95650292982786 7.64511859314515 7.71538203152752 7.71578241872247 8.11769251615148 8.22311677330505 6.87776096511256 6.01889173631265 0.200740717015071 0.197223227736988 0.204003920781548 0.197622682329868 0.195714597662937 0.194901259420062 0.197132093701709 0.200088458358803 0.206307326957461 0.195843211890817 0.198272358630767 0.195825442361919 0.196516726422781 0.201841090025974 0.20554141807479 0.193853187060428 0.197948054757378 0.200177601014933 0.202553045666689 5 5 + 2297609 2298462 2298083.727 2293372 2298977 + gene protein_coding_gene TRUE TRUE AT5G07290.1 (ARABIDOPSIS MEI2-LIKE); RNA binding AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices. similar to AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1), RNA binding [Arabidopsis thaliana] (TAIR:AT5G61960.2); similar to AML1 [Lycopersicon esculentum] (GB:AAT39005.1); similar to putative AML1 [Oryza sativa (japonica cultivar-group)] (GB:BAD46727.1); similar to Mei2-like protein [Hordeum vulgare subsp. vulgare] (GB:AAL85701.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA recognition motif 2; (InterPro:IPR007201); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.51201739177777 15.0868282430869 1.70956879103963e-08 3.31429213160755e-06 17.5623176135010 14.0581282115484 1.51201739177777 0.0995870318651799 AT5G11920_at 7.4969009329116 7.9446249860118 9.48208127007804 9.47805066110883 7.0603449965529 7.22839701040865 2.25413756363481 2.45583438992830 3.06702389565058 2.40123284371542 1.70739617384020 2.11169865255303 2.35503839615648 2.25224431739438 1.51572526791066 2.60473481568987 2.89288636473780 2.16930332213953 2.20892038397459 0.332655339010986 0.318157045060297 0.321210987448776 0.332586683862413 0.337854901417412 0.329465627616379 0.30837792568874 0.301184754925321 0.319170080275156 0.300450720411098 0.306765523620114 0.301760988198666 0.312175150228229 0.312098724770894 0.313176634652571 0.300450720411098 0.303168936676778 0.301144764330888 0.311746205719944 5 5|0 +|/ 3841019 3842145 3841632.3 3839392 3842372 + gene protein_coding_gene TRUE TRUE AT5G11920.1|AT5G11920.2 ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase|ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE) Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. similar to ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5), hydrolase, hydrolyzing O-glycosyl compounds / levanase [Arabidopsis thaliana] (TAIR:AT1G55120.1); similar to Glycoside hydrolase, family 32 [Medicago truncatula] (GB:ABE86259.1); contains InterPro domain Glycosyl hydrolase family 32, C-terminal; (InterPro:IPR013189); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl hydrolases family 32, N terminal; (InterPro:IPR013148); contains InterPro domain Sialidase; (InterPro:IPR011040)|similar to ATBFRUCT1/ATCWINV1 (ARABIDOPSIS THALIANA CELL WALL INVERTASE 1), beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G13790.1); similar to Glycoside hydrolase, family 32 [Medicago truncatula] (GB:ABE86259.1); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl hydrolases family 32, N terminal; (InterPro:IPR013148); contains InterPro domain Sialidase; (InterPro:IPR011040) 1.45820669455234 15.0844626973489 1.71229134598437e-08 3.31429213160755e-06 17.5610842623802 9.0551402037875 1.45820669455234 0.0898212326167484 AT5G22450_at 7.73906777906111 7.69891148955119 8.70192513335615 8.78350095482998 8.8087595361423 8.8394417386364 6.94285584913995 7.05082977282328 7.33076082216866 7.22523054638397 8.38091711422781 8.44525183427074 8.32013879971114 8.45097648789982 7.99919656260514 8.4593191213592 8.43581428138288 8.14075489087015 7.39705778086595 0.170758363077446 0.159350238836381 0.167346907620667 0.163552088532316 0.161509397030086 0.162183185161926 0.172164739457025 0.169614413567171 0.183625103876282 0.178172744308393 0.15842681627392 0.158233965205276 0.159096303583554 0.161538535545589 0.176290127548295 0.159277949100802 0.170641044202752 0.176589320916681 0.164792397736154 5 5|0 -|/ 7437153 7437911 7437527 7437148 7442937 - gene protein_coding_gene TRUE TRUE AT5G22450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19390.1); similar to Os01g0967100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045507.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU44129.1); similar to Os05g0107300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054424.1) 1.21842685241600 15.0765305579096 1.72145517219723e-08 3.31670090121314e-06 17.5569465266864 15.8940261248661 1.21842685241600 0.0249984083759322 AT5G27670_at 8.4469881886306 8.4161709323954 9.51616402717292 9.36198630866169 9.94032510356609 9.70832937471952 8.61685939460332 8.45714697891265 8.15811708290462 7.81661341463989 9.36377439558025 9.52317924335812 9.30521253556052 9.1550168690892 9.60732772058684 9.30668692396568 9.48740516137723 9.31903256136718 7.80787044613741 0.145437833615464 0.139247992303781 0.132421782175204 0.135406561066963 0.131558369072260 0.137130766064479 0.128481468801359 0.134855109387096 0.141831724365129 0.136837554893745 0.131783073586299 0.133996355123528 0.134525409407453 0.131464234988558 0.128481468801359 0.128481468801359 0.130665999930818 0.133712869469212 0.141922564709761 5 5|0 -|/ 9792822 9793332 9793017.667 9792564 9793458 - gene protein_coding_gene TRUE TRUE AT5G27670.1 histone H2A, putative Identical to Probable histone H2A.5 (HTA7) [Arabidopsis Thaliana] (GB:Q94F49); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT5G02560.1); similar to histone H2A [Brassica napus] (GB:CAB53509.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 1.30166530418061 15.0574497702189 1.74371859994139e-08 3.31670090121314e-06 17.5469801304471 17.7134903257101 1.30166530418061 0.055822012536308 AT5G67570_at 3.97487148034864 3.82585855138679 4.51148728443782 4.63844297665454 5.43866449412893 5.13302374820498 3.22696238191302 3.36610526867348 2.25022613012623 2.61511199202334 3.41172030286319 3.63765889820077 4.01637081721326 3.59971987193922 3.85416475167398 3.53772548986725 3.89162479339823 3.29879225639938 2.01718020000188 0.228217671417797 0.220710440087204 0.219711930868706 0.215851468868204 0.219656522570317 0.22469743431152 0.215488220344490 0.215488220344490 0.224951669720779 0.239786615885295 0.215488220344490 0.216949669342041 0.220449443175044 0.217149825623734 0.217335722272102 0.21934001769145 0.226038900500360 0.222867095267284 0.224374104948978 5 5 + 26971404 26971974 26971713.727 26969551 26972073 + gene protein_coding_gene TRUE TRUE AT5G67570.1 EMB1408 (EMBRYO DEFECTIVE 1408); binding similar to EMB2279 (EMBRYO DEFECTIVE 2279), binding [Arabidopsis thaliana] (TAIR:AT1G30610.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE85862.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.34687728946001 15.0532006678864 1.74871907241662e-08 3.31670090121314e-06 17.5447581979701 7.23949948409097 1.34687728946001 0.0672690010878169 AT5G03050_at 5.55374060141693 5.59828342928289 6.48906662623292 6.37030256374482 7.22776687865326 7.19839058910617 5.34940416321813 4.87497258811841 5.92127618613009 5.72902256245511 7.79859867753141 7.02626621779891 6.76190254428586 7.62970273303313 7.34399304712533 6.8642802516742 6.6569731876969 6.93845314312824 5.58890388459509 0.221714040172428 0.220890210909145 0.227472800245510 0.225123012977122 0.216895366839404 0.225936775898105 0.220666636123529 0.233519843652166 0.228639564397611 0.217876346867713 0.225000029519273 0.216421998503095 0.222105117208077 0.232341432496599 0.227293484540462 0.216878678287166 0.223367329590100 0.226303368341579 0.222797448515795 5 5|0 -|/ 715304 715777 715514.875 715028 716320 - gene protein_coding_gene TRUE TRUE AT5G03050.1 similar to knotted 1-binding protein 36 [Nicotiana tabacum] (GB:ABC46407.1) 1.42920090824134 15.0356949262215 1.76948590672993e-08 3.31670090121314e-06 17.5355944520679 12.5197019814772 1.42920090824134 0.0851381903137166 AT5G13570_at 6.44709810468854 7.06149012327845 8.0370566899736 8.02496526442612 8.54369445246242 8.1856866642581 6.22759163399976 6.14613022515083 5.7820850783449 5.15774863859182 7.0339498201496 6.79412403799655 6.85729764697547 7.43119405098378 6.65803114338125 7.36763706122751 7.20949906480165 6.78198734999032 5.37326024285784 0.226201913627555 0.223923203057432 0.229903129018348 0.22315459858041 0.227473748994294 0.233988629814625 0.220836628332082 0.224499315469442 0.23997773724861 0.226584986855120 0.228340834378448 0.230190545410576 0.233208423724311 0.228401372669072 0.230440249291901 0.220836628332082 0.230547804837859 0.232586245319668 0.229986366111951 5 5|0 +|/ 4369161 4369949 4369465.444 4367302 4370268 + gene protein_coding_gene TRUE TRUE AT5G13570.1 DCP2 (DECAPPING 2); hydrolase Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5?-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. similar to Os02g0805900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048445.1); similar to Putative ABC transporter [Oryza sativa] (GB:AAK98701.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Dcp2, box A; (InterPro:IPR007722) 1.65314514067037 15.0307704533577 1.77537610113761e-08 3.31670090121314e-06 17.533013824284 13.5614206490480 1.65314514067037 0.123879739074246 AT5G06240_at 5.36002038942028 5.71806286628087 6.4178354080059 6.5740955834032 6.9081874888543 6.79529553161337 4.257770372263 4.42339309932599 4.59823560919012 3.82949216114741 5.27640760053314 5.23541495030121 5.50303149510625 5.43015073654425 4.8682372518239 5.37199961469821 5.70591862797412 4.59093978240394 4.21432201348071 0.239732426831148 0.226799897298879 0.241450354982055 0.234683594357106 0.231647605516095 0.237931337692949 0.23509197581878 0.231786776834707 0.234292166816916 0.232716742021192 0.227513880837469 0.223304404251258 0.228272330702285 0.228669190295309 0.230022570601259 0.223304404251258 0.227360852777927 0.234418092859783 0.235949760700606 5 5 + 1888406 1889461 1888948.182 1888312 1889699 + gene protein_coding_gene TRUE TRUE AT5G06240.1 EMB2735 (EMBRYO DEFECTIVE 2735) similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS75234.1) 1.38389386698185 15.0302100621187 1.77604774261258e-08 3.31670090121314e-06 17.5327200778039 10.5377221434105 1.38389386698185 0.0759840324317633 AT5G26920_at 9.07677605587258 9.33944122881291 10.7819002231799 10.9005626655169 10.2040246757656 9.86248065585024 6.69801876680216 6.47017100862261 5.34059894366876 4.20805054080759 4.91127996312001 5.97382262395516 4.3362228361719 5.37064144792177 4.78376157683541 3.51595210231513 4.30397889945232 4.21894815730139 3.48212608183194 0.188837003263828 0.188837003263828 0.189291154547924 0.188837003263828 0.188837003263828 0.188883518791922 0.195120881502993 0.198197405719762 0.189545797205887 0.191235371914169 0.192479894056714 0.189439661008544 0.188837003263828 0.193239946635144 0.192834227282842 0.194105603670505 0.206186627757093 0.191744468189513 0.188837003263828 5 5 + 9477770 9478403 9478063.545 9475750 9478724 + gene protein_coding_gene TRUE TRUE AT5G26920.1 calmodulin binding similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to hypothetical protein MtrDRAFT_AC146914g39v1 [Medicago truncatula] (GB:ABE91845.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 1.43718719274931 15.0295546173435 1.77683365946374e-08 3.31670090121314e-06 17.5323764857650 13.6768808132130 1.43718719274931 0.0868107960830274 AT5G44450_at 6.7051978057676 6.67778793140805 8.03095760777644 7.94243359221831 8.405872398343 8.01893147294091 6.70856529605121 6.65259030302163 6.24067776892569 6.10508516915389 7.49885264769818 7.32985305153633 7.44117591975191 7.62018274154532 7.31776853960149 7.88722629075726 7.97389860411202 7.13062758789828 6.34288073698422 0.184872852575909 0.180041190507142 0.182607292747566 0.182972954963709 0.183904808157255 0.176217690364046 0.178612376035973 0.187821105177429 0.204595846461752 0.19506309669331 0.180142749723834 0.185150240790565 0.179769192497946 0.178037427240301 0.177652219640163 0.181742878485224 0.176217690364046 0.194541586885485 0.179140649157733 5 5|0 -|/ 17931596 17932432 17932047.111 17931250 17933246 - gene protein_coding_gene TRUE TRUE AT5G44450.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK09232.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601); contains InterPro domain Protein of unknown function DUF858, methyltransferase-like; (InterPro:IPR008576) 1.35445685746611 15.0283843363973 1.77823783839871e-08 3.31670090121314e-06 17.5317629559929 14.2700400832162 1.35445685746611 0.0695335883425963 AT5G09290_at 4.98120827799318 4.98687172997469 7.0669606330738 6.72865287532754 4.75643513400546 5.12995667495042 2.08513036322833 1.93489338437327 2.2118905110028 1.97450259110366 2.39710005635028 2.44217443924027 2.56166325049871 2.45248974223133 2.41345955191707 2.53760843857927 2.72089915265870 2.66226449321991 1.90433907818007 0.311226147385538 0.312128869002132 0.322920984050863 0.330679036636750 0.306020323619485 0.311671956156433 0.302291501832842 0.307987471292859 0.308737649094460 0.300107526786646 0.298019627414758 0.304931477387055 0.304825550730650 0.302520990321292 0.309317858400996 0.304925437298743 0.298019627414758 0.300984992563012 0.298019627414758 5 5|0 +|/ 2883217 2884064 2883595.3 2882429 2884230 + gene protein_coding_gene TRUE TRUE AT5G09290.1 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative Identical to Probable SAL4 phosphatase (3'(2'),5'-bisphosphate nucleotidase 4) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase 4) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 4) (IPPase 4) (SAL4) [Arabidopsis Thaliana] (GB:Q84VY5;GB:Q9FY86); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 1.45834436046918 15.0207205345582 1.78746332787012e-08 3.31670090121314e-06 17.5277434175306 6.98561435945706 1.45834436046918 0.0910099240175604 AT5G53420_at 8.68971245667238 8.73777601582461 9.7879553046835 9.77570082981976 9.99535919413708 9.50687429464104 8.18043883531087 7.83477617205681 6.62760371185318 7.4086118788124 8.46422428876858 8.61979759097506 8.63038385506201 8.64884701331166 7.87653355004898 9.31695006396105 9.17564479234299 8.58954571415125 7.00462585902944 0.193655031957436 0.181185792415029 0.187090840101558 0.191643993639955 0.189943376401699 0.194273659857951 0.188172594003745 0.187688218764097 0.238989396428679 0.190324691533241 0.181185792415029 0.185475579927732 0.188182668578283 0.187028357674170 0.196052699823437 0.187707854170444 0.190496311257157 0.193031478728935 0.221143082527147 5 5 + 21691906 21692642 21692215.273 21690751 21692959 + gene protein_coding_gene TRUE TRUE AT5G53420.1|AT5G53420.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.2); similar to CCT [Medicago truncatula] (GB:ABE82748.1); contains InterPro domain CCT; (InterPro:IPR010402) 1.52871178893343 15.00678117478 1.80437725709404e-08 3.31670090121314e-06 17.5204247724060 16.9030014754646 1.52871178893343 0.103913590834366 AT5G09730_at 2.64240564651720 2.59817196878703 4.14598781498182 4.49784452596897 5.44423861790386 5.31962233145205 3.88629406766238 4.6432359078541 4.08815365270344 4.0311769915523 6.43963243038081 6.30372182198862 5.72397770425723 4.79318405296396 6.33355912749764 6.8914836442698 5.96391551758386 6.16187700613429 3.54396362354236 0.287265260946642 0.267495729892095 0.275292517787626 0.262214666243446 0.258546633737834 0.264591462670281 0.258282790833958 0.262407215652017 0.263575238060329 0.259814159044870 0.267213311180699 0.260349363516615 0.259593619790996 0.269879334028024 0.270316167056014 0.258308336767255 0.260009743152055 0.261380048680906 0.267834759146346 5 0|5 /|- 3015363 3015866 3015620.3 3015248 3018263 - gene protein_coding_gene TRUE TRUE AT5G09730.1 BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing O-glycosyl compounds encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] (GB:CAJ65922.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to LEXYL1 [Solanum lycopersicum] (GB:BAC98298.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 1.79902529103666 15.0015612982688 1.81075587003169e-08 3.31670090121314e-06 17.5176816039225 9.12931694467454 1.79902529103666 0.146254221923856 AT5G23710_at 4.54155590575015 4.40918164311946 5.60688093291971 5.97575208239392 5.70118633470618 5.6974674940539 3.79678918993055 3.92724093925067 3.6492827342019 3.47351047013232 5.06867809344773 4.69814843469917 4.91342281407116 4.6697603752897 4.70572577343742 4.32052001088587 4.60231925004946 3.96811249161200 3.29833068800895 0.246037457216369 0.249709362712023 0.264635580480930 0.261548416827755 0.246981578433773 0.260721192505642 0.252512510798609 0.250480181815991 0.270201035261444 0.257742152128198 0.242704500985488 0.242704500985488 0.249279565622845 0.250885517450935 0.253728855157851 0.242704500985488 0.259392338518869 0.244313220132453 0.251984054616070 5 5 - 7996556 7997065 7996769.182 7996459 7997482 - gene protein_coding_gene TRUE TRUE AT5G23710.1 DNA binding / DNA-directed RNA polymerase similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD35466.1); contains InterPro domain RNA polymerase Rpc34 subunit; (InterPro:IPR007832) 1.36062886641395 15.0012407316886 1.81114839832226e-08 3.31670090121314e-06 17.5175130932314 9.00302875004104 1.36062886641395 0.0714823355305807 AT5G58960_at 6.54082137480126 6.95112555283193 6.69743013293532 6.69044954865911 8.08528013595574 7.92780414606586 6.43198691537452 6.43637856051634 4.97845600979221 6.15897097859765 7.66627172649862 8.28420425275442 7.55079578879562 7.57604707337702 8.03362499384009 8.06752755269079 7.38990650194034 7.65004449274016 6.18632957789463 0.237496396860927 0.2285747726361 0.23161161877284 0.2285747726361 0.2285747726361 0.235671727305091 0.234589378917276 0.235881487138504 0.243849465410136 0.236051739863398 0.2285747726361 0.2285747726361 0.229244791887187 0.235304863713308 0.230255600974853 0.2285747726361 0.251692335227236 0.231914395329792 0.23591171752701 5 5 + 23825016 23825472 23825270.727 23822943 23825704 + gene protein_coding_gene TRUE TRUE AT5G58960.1|AT5G58960.2|AT5G58960.3 GIL1 (GRAVITROPIC IN THE LIGHT) Mutant plants display impaired light-regulation of the hypocotyl randomization response. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45260.1); similar to hypothetical protein [Oryza sativa] (GB:AAK82451.1); contains InterPro domain Protein of unknown function DUF641, plant; (InterPro:IPR006943)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45260.1); similar to hypothetical protein [Oryza sativa] (GB:AAK82451.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Protein of unknown function DUF641, plant; (InterPro:IPR006943) 1.38144008287890 14.9992631486149 1.81357196770626e-08 3.31670090121314e-06 17.5164734305080 13.7461037058547 1.38144008287890 0.0760685433363193 AT5G07700_at 2.53799718502296 2.77192905529022 2.97211967253084 3.10584248139929 4.21031511476319 4.2904631956453 2.44020934377664 2.71969032680905 1.33704170176973 2.88699653676816 3.81552526519749 3.73222867247185 3.80925879956624 3.81571064939477 3.02799640250855 3.47511018969767 4.36404374929476 4.61786327969188 2.27387456811352 0.206896403309038 0.200939410571036 0.207042373730925 0.203180149928671 0.212786473901345 0.210284615049087 0.211727710352839 0.203230235038547 0.213844862451834 0.200939410571036 0.203736321881413 0.205186071654694 0.206853762367077 0.210442138977730 0.205448202881364 0.200939410571036 0.223079218090317 0.218214189448398 0.212645786709937 5 5 + 2451017 2451441 2451249.636 2450326 2451579 + gene protein_coding_gene TRUE TRUE AT5G07700.1 MYB76 (myb domain protein 76); DNA binding / transcription factor Encodes a putative transcription factor (MYB76). similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to Os04g0461000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052993.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.34673741439369 14.9877668267483 1.82773117225690e-08 3.31670090121314e-06 17.5104255782672 6.13016482766887 1.34673741439369 0.0686002404725218 AT5G42050_at 11.3097747624312 11.4238175906055 12.7455438766670 12.7277234309428 12.2803894456281 12.1043491060794 11.1291482037018 10.8499218328096 9.4459946438331 9.3440923093401 10.5459947601843 10.5289227551990 10.5943582136163 10.5090927356846 10.3531544615031 10.5314873168939 11.0188629492702 10.6286193579861 8.95511947913578 0.0802998280224706 0.0776380532672733 0.0782764752371923 0.07818502347009 0.0814155042027543 0.079476589262566 0.0780746931461966 0.08078514940947 0.0852064647840549 0.0824213768725288 0.0803073415864299 0.0776380532672733 0.0794944353727759 0.0789184938663244 0.0790108546249744 0.0783120961216449 0.080708660249688 0.0781873967085901 0.08934304647656 5 5|0 +|/ 16833460 16834005 16833742.25 16832717 16834529 + gene protein_coding_gene TRUE TRUE AT5G42050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27090.1); similar to N-rich protein [Glycine max] (GB:CAI44933.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain no description (SM00767); contains domain gb def: Hypothetical protein At5g42050 (PTHR23230:SF16) 1.31337264606576 14.9873219513648 1.82828151093636e-08 3.31670090121314e-06 17.5101914074491 21.7399403875557 1.31337264606576 0.0605149425499261 AT5G23720_at 3.96750363038663 3.75280651079678 5.29309260337444 5.23610273148022 5.6862258665648 6.06977267142951 4.02898055154965 3.55984812165379 3.89492060885027 3.45846565204443 5.37960337870622 5.15223475447121 4.7429678077773 5.30949484539094 4.66038452610628 4.8468553001404 5.40489282080623 5.05592349720941 3.65764264680507 0.227246290939669 0.222240327257897 0.232185971187113 0.219384146096908 0.233500836516142 0.227689196069194 0.219169341109903 0.214544966976038 0.220223356657519 0.235227552100989 0.214691337014400 0.218456360840771 0.22004011459011 0.216374709990004 0.219032159473325 0.222288669481822 0.220119376886734 0.226404910837493 0.226741667187388 5 5 + 8001819 8002571 8002292.364 7998233 8002843 + gene protein_coding_gene TRUE TRUE AT5G23720.1|AT5G23720.2|AT5G23720.3 PHS1 (PROPYZAMIDE-HYPERSENSITIVE 1); protein tyrosine/serine/threonine phosphatase Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling. similar to dual specificity protein phosphatase (DsPTP1) [Arabidopsis thaliana] (TAIR:AT3G23610.1); similar to Os01g0347000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042966.1); similar to Os01g0311500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042862.1); similar to dual specificity protein tyrosine phosphatase 1 [Solanum tuberosum] (GB:BAE44441.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387)|similar to dual specificity protein phosphatase (DsPTP1) [Arabidopsis thaliana] (TAIR:AT3G23610.1); similar to Os01g0347000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042966.1); similar to Os01g0311500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042862.1); similar to dual specificity protein tyrosine phosphatase 1 [Solanum tuberosum] (GB:BAE44441.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387) 1.57135770585414 14.9749353396735 1.84367731431704e-08 3.33069459725308e-06 17.5036673472574 9.0689853786841 1.57135770585414 0.111688799890390 AT5G06210_at 7.70741253100178 7.55053464577159 8.44349374204401 8.63054243482816 9.35544558526966 9.11555658860897 6.84846976878842 7.27165723947268 7.11668394404941 6.53700860563803 8.49231189511801 8.0027956850781 8.32282812808555 8.2135008253484 8.1717970757279 8.71029053537703 8.08917721908099 7.86257433215695 6.85606832510413 0.199128660925900 0.196066900978935 0.217916476190924 0.204334709353727 0.213262638335563 0.211316658682355 0.196454228906026 0.208208751805152 0.212561028553276 0.209068028642325 0.196066900978935 0.196066900978935 0.197349712927359 0.199590584375536 0.202985451538974 0.196187343664628 0.213643497975320 0.205971660318892 0.208556540314498 5 5 + 1878535 1879476 1879104.455 1878472 1879741 + gene protein_coding_gene TRUE TRUE AT5G06210.1 RNA-binding protein, putative similar to GR-RBP5 (glycine-rich RNA-binding protein 5), RNA binding [Arabidopsis thaliana] (TAIR:AT1G74230.1); similar to RNA-binding protein precursor [Nicotiana tabacum] (GB:AAL07518.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.46915677258092 14.9565456707055 1.86679591721277e-08 3.3584658932136e-06 17.4939669492602 15.6502622771034 1.46915677258092 0.094188846204022 AT5G10190_at 7.41610851520976 7.77851735349605 8.83031953785678 8.79971019873243 9.46457110453377 9.03312680505197 6.61317261880886 5.90826646940759 6.10004757507843 5.31002800008387 7.2856551429674 7.32846829977198 7.03300927350334 7.44073254848715 6.58428075874941 7.41266249495798 7.02692151822077 7.18633712936277 5.20853927054950 0.2468881588894 0.24191403503339 0.244049970334426 0.241262627829504 0.244077290492379 0.24376647784016 0.250296147008403 0.243674383314813 0.264787954107634 0.248468374108521 0.244163313081468 0.242717392276384 0.247496683936711 0.250149302717163 0.243417516813748 0.241262627829504 0.262838602697393 0.244390358666314 0.24463052854355 5 5|0 +|/ 3200451 3200965 3200717.2 3199134 3201364 + gene protein_coding_gene TRUE TRUE AT5G10190.1 transporter-related similar to UNE2 (unfertilized embryo sac 2), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G78130.1); similar to 4D11_20 [Brassica rapa subsp. pekinensis] (GB:AAZ67534.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 1.86281789308092 14.9501648253115 1.87489132508747e-08 3.3590918254436e-06 17.4905970473834 14.3313724142154 1.86281789308092 0.156259254295780 AT5G03230_at 7.5307180640875 7.57349073255789 9.37372867014898 9.69377115382517 10.2177712878793 10.0767317528342 8.77531148579587 9.05891860205041 8.02369691216951 8.0874385464667 9.37730580689543 8.59064859619338 9.74274455874838 9.4125870661158 8.43136395566583 9.11144353482359 9.93430247864163 9.1116239182034 8.03395863659195 0.192138873588899 0.179802871199537 0.175694264251155 0.167665989002509 0.171649207923341 0.17103455743728 0.174831626302804 0.171132199049961 0.188108195905342 0.179267550454531 0.167665989002509 0.170338284593489 0.168202352220525 0.170657438507451 0.170680785407738 0.167665989002509 0.170921214827045 0.167665989002509 0.174854740383458 5 5 + 769683 770033 769883 769513 770384 + gene protein_coding_gene TRUE TRUE AT5G03230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60680.1); similar to Protein of unknown function DUF584 [Medicago truncatula] (GB:ABD32800.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 1.38576439302527 14.9333747668455 1.89637642019204e-08 3.38360310938405e-06 17.4817197437145 17.6687388125576 1.38576439302527 0.0782738773583876 AT5G41350_at 8.47815682255465 8.476944231405 9.58412340835272 9.69613393030888 10.1158376715351 9.75726023425377 8.34877365184344 8.11067195794191 7.52007755906448 6.98781907339516 8.65483322432138 8.34790907505154 8.6108078291301 8.62988453595173 8.0867541082172 8.7728308295518 8.60527877176946 8.55838859255807 7.13042431581935 0.193034588956490 0.188949817607645 0.193365954928664 0.192589154570773 0.191904721424682 0.193745145639329 0.203464598697683 0.194477588655703 0.205866901095401 0.203713377651464 0.188949817607645 0.188949817607645 0.191579916419781 0.197158654241915 0.204663091483367 0.188949817607645 0.199026946907102 0.198257777635854 0.206503531686875 5 0|5 /|- 16559254 16560042 16559778.7 16558692 16561200 - gene protein_coding_gene TRUE TRUE AT5G41350.1 zinc finger (C3HC4-type RING finger) family protein similar to RHB1A (RING-H2 finger B1A), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G00335.2); similar to Os10g0142100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064147.1); similar to Os11g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067717.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65911.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.37763218328447 14.9121929186272 1.92386522628993e-08 3.41188458467741e-06 17.4704996708964 16.9440424986470 1.37763218328447 0.0769690694705156 AT5G14550_at 4.89881359277148 5.14637369786428 5.805992320361 5.60514219910008 6.63646694593105 5.92250858130188 2.82940250994554 2.70258016962930 2.55716584735378 2.99183652034803 3.72181929768414 4.07443948241767 3.63551668642809 4.16887223820355 3.42267769855396 3.91045513013366 4.25620168817877 3.95415641013116 2.07616327444800 0.276318756038878 0.277969839234993 0.291041884711454 0.290023798966730 0.273900717956792 0.280612901329793 0.270347704399976 0.266716035894177 0.282917989156607 0.269050279516802 0.266716035894177 0.268578920303948 0.271306933518440 0.270791975080568 0.26879336082471 0.270841563786543 0.266716035894177 0.266873651927457 0.280510669437934 5 5|0 -|/ 4691492 4692781 4691997.6 4691013 4694058 - gene protein_coding_gene TRUE TRUE AT5G14550.1|AT5G14550.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62305.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11940.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) 1.72476523368531 14.9004394803147 1.93930548982902e-08 3.41188458467741e-06 17.4642638535027 8.16077960695456 1.72476523368531 0.137079310382525 AT5G62150_at 4.84536715145904 5.44051960897114 8.48765264110678 8.40447901189327 5.64317221039499 5.31267544071212 2.37882726677816 2.83070518915234 1.98296043993358 2.63143270828967 2.64820950722662 2.77021269789504 3.41772541841008 2.16974520177634 2.19312618911619 2.3689246233113 3.96013655551691 2.32157892515355 2.29213835258044 0.305893308669217 0.313862335185122 0.330181414192286 0.337081246795995 0.316851793661073 0.314168636676869 0.300231474067741 0.301946692164720 0.303330836150080 0.302896075583215 0.305635146252964 0.301542166985945 0.310086143526801 0.305606993342524 0.297751774223115 0.303014662531571 0.297751774223115 0.298622512129434 0.297751774223115 5 5 + 24975580 24975826 24975716.909 24975467 24975995 + gene protein_coding_gene TRUE TRUE AT5G62150.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G25433.1); similar to Os10g0524300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065106.1); similar to Putative dihydrodipicolinate reductase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15285.1); similar to OSJNBa0019K04.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD41658.3); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) 1.75858512240140 14.8990346402687 1.94116002281428e-08 3.41188458467741e-06 17.4635180340214 7.93461709342614 1.75858512240140 0.142131099853174 AT5G47060_at 5.68692747537669 6.76940755564395 7.83565089895004 7.95444629027994 8.59716088625746 7.78839765989521 4.68011795576144 4.82808375409602 3.88219161843016 3.61873818589182 5.49199510306104 6.91733890651965 5.74059546100755 6.40197834288452 5.29069111258763 6.23403847734123 5.31840833214304 5.82741836252446 3.07733322359383 0.244816582919726 0.231862106449507 0.244120279850891 0.241787066362843 0.233737167530370 0.244723825430181 0.238804948153975 0.23570868588921 0.248339948457364 0.242971285215887 0.231862106449507 0.232133313822810 0.236112872988765 0.247221006446927 0.246508701440042 0.234359116091731 0.264037425026754 0.251526511801921 0.231862106449507 5 5 + 19134187 19134817 19134469.909 19134015 19135273 + gene protein_coding_gene TRUE TRUE AT5G47060.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to hypothetical protein 26.t00087 [Brassica oleracea] (GB:ABD65032.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 2.46475004245642 14.8971098656427 1.94370406328224e-08 3.41188458467741e-06 17.4624960192146 11.4819719036479 2.46475004245642 0.236133536020862 AT5G53570_at 7.81607783376947 7.88434007181938 8.48113336127487 8.67118568233065 8.56935015043709 8.642938781312 5.7283513979092 6.69087119982211 5.50647598450095 5.12410616441555 7.40866633191803 7.71981851141389 7.28780468855625 7.63720088926679 7.46814020256594 7.74633521725748 7.70066378171296 7.46001176312822 4.97012764569479 0.204138491339232 0.201613566199423 0.208377248595152 0.212799164527651 0.198529071278762 0.204172764104285 0.222828424780640 0.208430189711269 0.241148077769152 0.205683940723046 0.209669251780204 0.201147851227934 0.20314540871306 0.209621993690171 0.203851303168327 0.202131895568818 0.208367612900642 0.22046065608414 0.217175732790173 5 5 - 21778188 21778699 21778459.364 21777816 21780688 - gene protein_coding_gene TRUE TRUE AT5G53570.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to RabGAP/TBC [Medicago truncatula] (GB:ABE88406.1); similar to Os09g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063739.1); similar to Os08g0547200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062427.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 1.95729272151614 14.8781050857401 1.96901941730549e-08 3.42883650932705e-06 17.4523945818777 14.1874394455500 1.95729272151614 0.170670793960262 AT5G38710_at 7.88076071599335 8.11608594762671 9.31859615764836 9.31755753902776 9.45094975502748 9.15065323306088 8.74424246919032 8.82384849404196 4.66462469088111 6.47935893569927 6.88956538754227 4.92178092222623 8.28528477080292 7.67318579388296 5.86481026554643 8.67580710213494 9.06662374157906 7.1448305901693 5.56465198706692 0.163908873947983 0.163776257463065 0.168217638081775 0.174208468827498 0.171591606647998 0.166537113485486 0.169244304643130 0.166602680060184 0.187125769756846 0.173420201626628 0.176300289802065 0.171213660243612 0.162880579939416 0.172420164135256 0.179239245486555 0.163664621686815 0.166586559641561 0.169028821318203 0.189554138019044 5 5 + 15520352 15520889 15520687.818 15518475 15521339 + gene protein_coding_gene TRUE TRUE AT5G38710.1 proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative similar to ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5, PROLINE OXIDASE), proline dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G30775.1); similar to proline dehydrogenase [Glycine max] (GB:AAR86686.1); contains InterPro domain Proline dehydrogenase; (InterPro:IPR002872) 1.33194781583222 14.8779868500309 1.9691780343387e-08 3.42883650932705e-06 17.4523316785353 15.2927274270944 1.33194781583222 0.0674456355573713 AT5G53000_at 8.34599393134278 8.40933039521527 9.01777719209738 9.17139563731508 9.41563159034144 9.0604342611843 7.58481766820804 7.75463266293919 6.86328112300914 6.5075710849705 8.30337185305466 8.6672229051395 8.2737184859072 8.35423234018825 8.33588984956333 8.12379338949987 8.176492396328 7.8856754657127 6.69807083418243 0.214675780532879 0.205838924155386 0.202814590648556 0.205013178861287 0.203144041185839 0.211538883924380 0.207170139655647 0.209245964451208 0.215629012621459 0.228908441749677 0.211071655799228 0.202927833776042 0.202814590648556 0.210904983404115 0.202814590648556 0.205660248065479 0.208036936312389 0.217941985093294 0.215352658467461 5 5|0 -|/ 21502903 21503466 21503267.1 21502681 21505217 - gene protein_coding_gene TRUE TRUE AT5G53000.1 TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD) PP2A-associated protein with a possible function in the chilling response Identical to PP2A regulatory subunit TAP46 (2A phosphatase-associated protein of 46 kDa) (TAP46) [Arabidopsis Thaliana] (GB:Q8LDQ4;GB:Q9LVV2;GB:Q9XHD0); similar to Os12g0137500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066109.1); similar to PP2A regulatory subunit-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72555.1); contains InterPro domain TAP42-like protein; (InterPro:IPR007304) 1.35901228871420 14.8612883131368 1.99172022236843e-08 3.45421580179613e-06 17.4434404944369 16.0723469671945 1.35901228871420 0.073951749271363 AT5G17860_at 6.93758842485696 7.59729560712411 9.00143569353575 9.20677800453177 9.16117273652589 8.7243030655301 5.97660233241586 6.72356484847737 5.8279035635569 5.31018635539476 6.33548542243341 5.72448798846822 6.74841399796397 7.23554104221714 6.6894392833575 8.86430943251838 7.65508305987811 7.06485236708422 3.97058450056499 0.25565981862733 0.243003947691725 0.249446293193878 0.249395024177130 0.253015116855127 0.246271482334063 0.251981697257497 0.245216138298344 0.246088492876086 0.25119380462843 0.249595572443487 0.243003947691725 0.247224286784109 0.248805350644752 0.247899083631026 0.244845125985623 0.254564955862511 0.252387021168397 0.246567781056758 5 5 - 5902653 5903199 5902925 5902396 5904382 - gene protein_coding_gene TRUE TRUE AT5G17860.1 cation exchanger, putative (CAX7) similar to cation exchanger, putative (CAX8) [Arabidopsis thaliana] (TAIR:AT5G17850.1); similar to Sodium/calcium exchanger membrane re (GB:ABE92415.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) 2.10906816977344 14.8476836943191 2.01029382286607e-08 3.47253761745221e-06 17.4361859638111 13.9540557794976 2.10906816977344 0.191629200050833 AT5G52050_at 1.27517245458616 1.41513688408149 3.02139574465838 3.31047776188881 2.97119352160132 3.31235260629220 1.99440525400487 2.15461407435276 1.84456993026014 1.69817315682554 3.11519127408828 2.82888573563199 2.93315260765313 2.98551286106410 2.74707977541335 3.4565486614356 3.92674165425606 3.55213330025282 1.88847708511093 0.218446528983408 0.215793924571083 0.218334830791383 0.218216725904074 0.211047804434438 0.227241948469207 0.216740126064303 0.213347674963361 0.227208891122360 0.212892163608531 0.209888870882532 0.215053633536606 0.214219857778943 0.214605275031103 0.217888587144612 0.214367570187304 0.210313945827193 0.217322934666281 0.2177305695954 5 5 + 21157102 21157593 21157328.727 21156088 21157869 + gene protein_coding_gene TRUE TRUE AT5G52050.1 MATE efflux protein-related similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G23030.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE90557.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 1.41338587575637 14.8398010776949 2.02114185871822e-08 3.47742200657201e-06 17.4319782274441 4.93362476657822 1.41338587575637 0.0856952369476158 AT5G49900_at 6.10169249350123 6.35695407692646 6.65696906058756 6.54326294751505 6.39618108923215 6.70136910515418 3.70766316456774 3.54202961950186 4.13107889566944 3.88295916199883 5.11455787214175 4.97802591110291 4.82644689110962 4.8798199092449 4.96310019822023 4.98325735856501 5.49002728318935 5.33533537669187 3.95775616882900 0.217034326136597 0.21353340441372 0.217622653043426 0.215249446871022 0.222717043469517 0.223369407338549 0.215537025638681 0.217495876724490 0.220916613262397 0.217853753485415 0.21630543311683 0.216010205094730 0.220831845738005 0.228461288703998 0.217027419408506 0.213999785532677 0.226712848814413 0.220200125993194 0.21754727196449 5 5 - 20314485 20315089 20314711.455 20313744 20319572 - gene protein_coding_gene TRUE TRUE AT5G49900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33700.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10060.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24180.2); similar to unknown protein [Oryza sativa] (GB:AAL31035.1); similar to Os11g0242100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067588.1); similar to At5g49900 [Oryza sativa (japonica cultivar-group)] (GB:AAX95400.1); contains InterPro domain Protein of unknown function DUF608; (InterPro:IPR006775) 1.36404199326601 14.7568298215116 2.13927996314161e-08 3.66613324029789e-06 17.3874912221513 10.2817249073894 1.36404199326601 0.077133038361116 AT5G24690_at 7.60634322055432 7.55245080758178 8.21162575442875 8.16864491702513 8.91462913324518 8.89218241090142 7.55267625458772 7.63905481087665 7.09398643573692 6.42537552694214 7.96622616679128 8.00273234295941 8.18624757101753 8.09600533306381 8.26573445065834 8.15555434335241 8.05133352706962 8.09475098719337 6.56664025641521 0.156577974038728 0.157765132413528 0.160737127742924 0.159066123569678 0.163455758265055 0.165337277899802 0.161666601537942 0.163387150701504 0.16541413635634 0.184964643886558 0.155049968178434 0.160282886015015 0.157483033115747 0.163193852068647 0.156396180958542 0.160427300286568 0.162111798128386 0.156270375535904 0.176271053545311 5 5|0 -|/ 8455882 8458484 8457279.65 8455460 8458741 - gene protein_coding_gene TRUE TRUE AT5G24690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22790.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84237.1) 1.18306414886590 14.7434765174678 2.15898673479354e-08 3.68533863194465e-06 17.3802977778176 15.4660294952974 1.18306414886590 0.0195152071606093 AT5G55850_at 9.44893586293998 9.64888132611403 10.7459677064465 10.7170558305509 10.6685132791556 10.4782159326827 8.68324367209746 8.7822659614668 9.45879381486988 8.64563392511224 10.3515327975900 9.8541135569636 9.8360844937959 9.81708535492924 9.69579969759481 10.024148359932 9.97099838567882 9.84048108451245 8.65879539899234 0.153747165986142 0.145352407316978 0.144423515513088 0.144074513823727 0.144461549049289 0.148622965422627 0.157480982277557 0.150702074881988 0.155523294124713 0.156288715274401 0.146901351464838 0.145593649132414 0.154996075229981 0.146837068838387 0.150857790452394 0.144426400687031 0.145767570421093 0.148425085458531 0.151696311946400 5 0|5 /|+ 22621775 22622050 22621886.556 22620602 22622458 + gene protein_coding_gene TRUE TRUE AT5G55850.1 NOI NOI protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04410.1); similar to Os09g0253000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062688.1); similar to nitrate-induced NOI protein [Zea mays] (GB:AAB86937.1); contains InterPro domain Nitrate-induced NOI; (InterPro:IPR008700) 1.2571562841354 14.7360419949574 2.17004429481648e-08 3.68968729406076e-06 17.3762887171589 19.3190623694481 1.2571562841354 0.0509946549180219 AT5G07960_at 7.84809022710201 7.67184296168939 8.402901415352 8.55810897315869 8.76659634486201 8.62234110098504 6.78231787786693 6.78630995622145 7.27477220700752 6.88421620419557 8.43894537951198 8.2887732893549 8.08096711840805 8.2417093475026 8.2584524026202 7.83570113692854 7.74295099894739 7.78177590182427 6.57177407346537 0.162330431541284 0.157656406234325 0.158323699887229 0.158993752092901 0.166098159485433 0.158736440012256 0.163571563024056 0.169861918300962 0.165787402865333 0.168774233483821 0.165822042350053 0.159382299586528 0.158108049638285 0.163946545329725 0.160462680058976 0.160951285287482 0.163103922743455 0.157847275394286 0.165767017147093 5 5|0 +|/ 2542356 2543229 2542798.625 2542247 2543460 + gene protein_coding_gene TRUE TRUE AT5G07960.1 Identical to UPF0139 protein At5g07960 [Arabidopsis Thaliana] (GB:Q9SD88); similar to unknown protein [Sorghum bicolor] (GB:AAM47587.1); similar to Os03g0756800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051319.1); contains InterPro domain Protein of unknown function UPF0139; (InterPro:IPR005351) 1.24437599410029 14.7109612371680 2.20780548381828e-08 3.73922832423462e-06 17.3627424079765 15.4267704113764 1.24437599410029 0.0477009718131097 AT5G67340_at 5.46321550064612 6.18595488268698 8.37092658371913 8.58099981904065 7.04336966609035 6.66939602306819 2.16735369437798 2.43878119452659 3.78282358833488 2.25620769889522 2.60489384971285 3.05208213418377 2.24770141662792 3.74403172503212 2.05105086529938 2.38944169619866 3.42993545185685 2.72450664627582 2.28531999657258 0.258412589200253 0.247316869245002 0.257288499970045 0.25420267523951 0.259384298377188 0.252090851612596 0.24142287910719 0.24142287910719 0.249098360153268 0.246214966667870 0.241911026170576 0.244821919130570 0.25346983679342 0.244357514439706 0.244463249463409 0.24142287910719 0.250454198577667 0.242123892423124 0.253889013756039 5 5 + 26883989 26884482 26884255.091 26881782 26884828 + gene protein_coding_gene TRUE TRUE AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G23140.1); similar to arm repeat-containing protein [Nicotiana tabacum] (GB:AAO61490.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 1.80400920840051 14.6682226195167 2.2738131960188e-08 3.83603712517818e-06 17.3395822010738 8.64261928772749 1.80400920840051 0.152838931326357 AT5G18250_at 5.61821388759416 5.61362239243943 6.79627270903021 6.92928140782017 6.91180731383697 6.5575284174546 5.67369416018103 5.77373138613487 3.45475743412822 3.7816239152776 5.17768228333908 4.88006946667928 5.8321961150528 5.30868049491723 5.25714170250176 5.45644695322107 5.71571226421184 5.0074263599213 4.25766045994633 0.235628563948214 0.234231157381629 0.243124674237458 0.233831757430249 0.239896562227000 0.235531788948426 0.239725584298546 0.231464596156595 0.241930397694903 0.235192722973397 0.247166661926246 0.239866357216499 0.244673968893529 0.245984352538529 0.237585491540235 0.234805753207565 0.233759514545289 0.241537752265687 0.232818803481792 5 5|0 +|/ 6033800 6035194 6034595.375 6033704 6035382 + gene protein_coding_gene TRUE TRUE AT5G18250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04040.1); similar to Os01g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042664.1); similar to gb protein [Sorghum bicolor] (GB:AAL68853.1) 1.31348959532230 14.6579484928277 2.28999989792829e-08 3.84837069965542e-06 17.3340001478275 10.8146523216937 1.31348959532230 0.0677423092185027 AT5G27860_at 6.56839190182703 6.03163896049113 7.52534229272444 7.58193162521344 7.89602352815934 7.30270511583429 5.0962001722217 4.59105250050406 5.64339240647104 5.19486783095965 7.4117675450659 7.68886467719905 6.7735023700251 7.68314498699405 7.26194722871256 7.82430474777782 7.1529565421413 6.87581486463076 5.90351328303269 0.372546656623583 0.372546656623583 0.372546656623583 0.378444382762449 0.372546656623583 0.435814532543961 0.398170474039589 0.421999147154239 0.405265815700177 0.381280239056307 0.372546656623583 0.376636083860551 0.375693638678876 0.375248535084024 0.372546656623583 0.372546656623583 0.372546656623583 0.372546656623583 0.395765895289155 5 5|0 -|/ 9876286 9876320 9876301.667 9874828 9876468 - gene protein_coding_gene TRUE TRUE AT5G27860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to vitellogenin, related [Medicago truncatula] (GB:ABE85691.1) 1.87906322677621 14.6429201534150 2.31390349703707e-08 3.86349645921496e-06 17.3258249467224 13.0314752840250 1.87906322677621 0.164037837703053 AT5G64860_at 7.97510143486257 7.7730139743285 8.22072232919386 8.05122723386609 8.88633097123792 8.49505963027175 6.86394284697161 6.62685324268197 6.63218405232996 7.22582492566293 8.59815929623049 8.56269225604954 8.43257941051448 8.40631084617289 8.67932128503698 8.31482469124322 8.31253179807907 8.81282705727249 6.45684031911544 0.121042320403069 0.122120579846177 0.125066858597625 0.122549178064369 0.122027524112320 0.126245877255321 0.127264680202205 0.129681537239576 0.143646478926910 0.123634782386595 0.12290805997169 0.118440395160329 0.117029985437669 0.123542639288331 0.125451042043808 0.117029985437669 0.117235421793032 0.121673131228996 0.129269057643985 5 0|5 /|- 25942662 25943379 25943052.333 25942399 25946074 - gene protein_coding_gene TRUE TRUE AT5G64860.1 DPE1 (DISPROPORTIONATING ENZYME); 4-alpha-glucanotransferase Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation. similar to DPE2 (DISPROPORTIONATING ENZYME 2), 4-alpha-glucanotransferase/ heteroglycan binding [Arabidopsis thaliana] (TAIR:AT2G40840.1); similar to 4-alpha-glucanotransferase, chloroplast precursor (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (GB:Q06801); similar to Glycoside hydrolase, family 77 [Medicago truncatula] (GB:ABE89412.1); similar to Chain A, Structure Determination And Refinement At 1.8 A Resolution Of Disproportionating Enzyme From Potato (GB:1X1N); contains InterPro domain Glycoside hydrolase, family 77; (InterPro:IPR003385) 1.42344828206835 14.6410966900074 2.31682229691054e-08 3.86349645921496e-06 17.3248321893977 15.5047925891490 1.42344828206835 0.0913873926466203 AT5G62740_at 9.29986112127013 9.4464927845524 10.3365681713826 10.3664588120901 10.3353223048006 10.2398507083017 8.56118284246815 8.60751569681859 8.08114272922614 8.2136075775568 9.0155711965696 9.03231493597078 9.41691951671585 9.1528335166275 8.76839565842221 9.11802104804593 9.51461684492342 9.2222832463825 8.02271612652843 0.128749845706974 0.120163783667520 0.129332701751587 0.125988127232157 0.125928757775810 0.128982485751611 0.120431561386495 0.120459366741723 0.129177326595202 0.127745131254741 0.118674330224407 0.120786562338397 0.121984193259407 0.119126799999152 0.118562468140818 0.121395791174790 0.120536976523716 0.121496218414914 0.119994717948980 5 5|0 +|/ 25219053 25219724 25219537.3 25218173 25219982 + gene protein_coding_gene TRUE TRUE AT5G62740.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT1G69840.6); similar to hypersensitive-induced reaction protein [Capsicum annuum] (GB:AAS98165.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 1.19504211944328 14.6259413798116 2.34123715950939e-08 3.88925164031079e-06 17.3165742376156 18.2796273751577 1.19504211944328 0.0317477986197634 AT5G04080_at 7.5782519617505 7.75434386794156 8.79203654828989 8.74527413612552 8.6664966258529 8.68566491221944 8.27591843343323 8.22032774050217 6.937072949694 7.41237300602532 8.89637572317205 8.53701178129718 8.67995973216448 8.71772561498982 8.31376288916853 8.5845554592234 8.98700509288607 8.5301195584793 6.73106393672613 0.120741881409032 0.124737343715351 0.121821153882508 0.125671082069111 0.121257813461342 0.124269232581351 0.121625835169737 0.127238902519578 0.128309375336977 0.128369955626591 0.122624350262988 0.119889335966433 0.121137832666654 0.122803455721647 0.123598663720260 0.121552379370053 0.125706097211382 0.119184365181126 0.136990807281486 5 5|0 +|/ 1104820 1105012 1104948.75 1104706 1105389 + gene protein_coding_gene TRUE TRUE AT5G04080.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87214.1) 1.19706770266126 14.6136429364538 2.36125588355062e-08 3.9075352466963e-06 17.3098639338508 16.1811148343833 1.19706770266126 0.0331311926618102 AT5G22360_at 8.48831895400485 8.65801326723845 9.68284647532727 9.5578661605606 9.84166673640902 9.72751680497866 8.51182258780748 8.45068978476585 7.8668486323056 7.80394397907321 9.26862289326695 8.90219013523027 8.83090251732278 9.03688716717902 8.9417622092954 8.95893994855111 9.06332778056855 9.06144826507676 7.55665848895917 0.157979875936818 0.153909998109213 0.159937721081606 0.161186001991394 0.165054846391673 0.167078197091522 0.159286487307455 0.160392102399323 0.190336280236288 0.167166199022885 0.159691607878897 0.160664615729942 0.157789313046520 0.154829122599372 0.158989127552269 0.154468926468564 0.165830137145173 0.159043988040683 0.174738602963342 5 5|0 -|/ 7404395 7405543 7405092.1 7404007 7405742 - gene protein_coding_gene TRUE TRUE AT5G22360.1 ATVAMP714 (Vesicle-associated membrane protein 714) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 714 (AtVAMP714) (VAMP714) [Arabidopsis Thaliana] (GB:Q9FMR5;GB:Q93Z99); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Os10g0154000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064184.1); similar to Putative synaptobrevin-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM14694.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 1.22039465515671 14.5993435988846 2.38476649071416e-08 3.92854364849875e-06 17.3020517140594 17.4900895037235 1.22039465515671 0.0428056458314186 AT5G44260_at 6.41989367628603 6.57058586208295 5.73478853095177 6.34721934780776 8.06878029130901 8.0351633551917 3.55282796941842 4.12902887053241 5.87748652450282 3.3735441363116 6.20890187303518 6.09785927612632 6.56655293235712 6.03652343096574 7.12926520507682 5.68876432487898 5.94215264885684 5.69535573201992 4.32595807325438 0.223341051831448 0.224220232188008 0.230993767207821 0.226114762914834 0.229727691826350 0.244581634461735 0.240958738756697 0.243517538881362 0.23272940958104 0.242851530287251 0.223220196216047 0.223450627353346 0.229649155366345 0.224609204781726 0.230410571513902 0.223220196216047 0.232857423840309 0.223220196216047 0.233555143634260 5 5 - 17847233 17847776 17847500.818 17846853 17848452 - gene protein_coding_gene TRUE TRUE AT5G44260.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT1G03790.1); similar to putative CCCH-type zinc finger transcription factor [Gossypium hirsutum] (GB:AAX20386.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.76170640164673 14.5949312114666 2.39207265953366e-08 3.92854364849875e-06 17.2996388616180 11.4554534075829 1.76170640164673 0.147950829362159 AT5G53150_at 3.93086793288344 3.72719330009472 4.67021686839551 4.74532866719389 5.18595284721824 5.10871556683972 3.3090742896742 2.78850334398261 3.03732824605591 3.22883236689216 4.54343445227329 4.94869147270571 4.69611487443158 4.36150952328159 4.8743557392757 5.59026443119417 5.11503663584226 4.51065842444225 3.96812610439669 0.226731493954582 0.221061181011808 0.225595937778606 0.221858823377367 0.223379480967179 0.221840546528490 0.222731200543426 0.225289102903752 0.226944034417694 0.219962939524639 0.219962939524639 0.221890292455894 0.221876895946644 0.22045488374769 0.219962939524639 0.219962939524639 0.232691575313266 0.236813965443084 0.231492739981208 5 5 + 21573862 21574255 21574058.273 21572017 21574717 + gene protein_coding_gene TRUE TRUE AT5G53150.1 heat shock protein binding / unfolded protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25560.1); similar to Aminotransferase, class-II; Heat shock protein DnaJ [Medicago truncatula] (GB:ABE78703.1); similar to Os03g0401200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050318.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.45361152957616 14.5622468192752 2.44695850026963e-08 4.00351880099609e-06 17.2817332847295 8.3039501520165 1.45361152957616 0.0985173382767598 AT5G14410_at 6.29179101827841 6.48816909799268 7.16125911060834 7.47200690636178 9.0130718610198 8.50110464434978 7.34174725925313 7.42060253080025 6.09422811599399 7.21930833343588 9.03241193514906 9.18043612562777 9.06525424534136 8.98495202298788 8.56194188608514 8.69102613498977 8.55853096516906 8.51954247199556 7.52731898576963 0.206000058552049 0.201989455648569 0.205048277874909 0.196127861794007 0.196127861794007 0.207134859185251 0.20484056909109 0.202792996913033 0.243997273083708 0.210050846511073 0.198030010899077 0.198054376556823 0.199078278846067 0.196218829090007 0.211326568316299 0.196447549428576 0.200894529700897 0.201407859554452 0.201356092193189 5 5|0 -|/ 4646913 4647376 4647116.9 4646788 4647447 - gene protein_coding_gene TRUE TRUE AT5G14410.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87311.1); similar to Os01g0938400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045341.1) 1.51429665784442 14.5291723780446 2.50390001634911e-08 4.08128091886857e-06 17.2635554309422 15.3468259461587 1.51429665784442 0.109921337485244 AT5G03700_at 3.66474773136663 3.83281186126789 3.66008693184332 4.0126268721125 5.66581287977475 5.46143990157546 3.14849696298353 3.12295326034992 3.20535171012805 3.05024863812844 5.04829110222540 5.1770517550169 4.24935449909846 5.2483408272664 4.75764219075796 4.16764539213302 4.21376484319883 3.99742598174688 3.31430078501626 0.244394936166690 0.239429567467281 0.251946039268665 0.243094532511918 0.257753171923939 0.251829971065034 0.247559640470025 0.241164683553422 0.246412198968623 0.253341429701873 0.239035402075624 0.239035402075624 0.248346203899792 0.247722471657018 0.243236231591059 0.239035402075624 0.245269313173570 0.248859967677795 0.251662991325903 5 5 - 965924 966437 966264.091 965873 967321 - gene protein_coding_gene TRUE TRUE AT5G03700.1 PAN domain-containing protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to S-receptor kinase-like protein, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92753.1); similar to Os02g0527900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047006.1); contains InterPro domain Apple-like; (InterPro:IPR003609); contains InterPro domain N/apple PAN; (InterPro:IPR003014); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 1.33760586092037 14.5065421384531 2.54369230993759e-08 4.128166947383e-06 17.2510836712628 7.96982535933661 1.33760586092037 0.0764092206542065 AT5G03970_at 5.47600046024329 5.52504932627117 7.22943514735888 6.88101535946197 6.68217228050356 6.89148628260804 4.57525840353986 5.08608580260061 4.75009283220237 3.78001982352701 5.52227749404336 5.50860471111675 5.11387694052598 5.38384667846524 5.445901740672 5.74116244913336 5.99926947015235 5.61760213115793 4.17420598865084 0.200949715169237 0.199098651472164 0.203780621323459 0.203764109192159 0.209764690245746 0.204764099346255 0.209521113552738 0.216346584778874 0.226665219957611 0.215453333768035 0.204198927878504 0.197833314312124 0.208000773672983 0.217073012670186 0.202820413451155 0.198362192731329 0.200100682556653 0.20770393384695 0.202994402271472 5 5 - 1071723 1072284 1071947 1071567 1073422 - gene protein_coding_gene TRUE TRUE AT5G03970.1|AT5G03970.2 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G07610.1); similar to F-box protein [Capsella rubella] (GB:AAR15468.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043)|similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G07610.1); similar to F-box protein [Capsella rubella] (GB:AAR15468.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 1.53111179488384 14.502030488967 2.55170758131047e-08 4.128166947383e-06 17.2485939355428 10.9314831745076 1.53111179488384 0.113289244420169 AT5G47760_at 6.52760880122957 6.29387490894431 7.48975982509058 7.3697848728824 7.63326170367107 7.79712098671986 6.33563388550617 6.2044131675856 6.02058529989954 6.13318620429586 7.36452026897932 7.07598584575116 7.3695607324944 7.61414219345038 7.4430084635674 7.44491326053405 7.36553971932108 7.37152264056835 6.12982375661445 0.177484899911668 0.177599399148797 0.175632663958801 0.176656843390949 0.177584708106327 0.171912435756887 0.171656077769018 0.177043194412885 0.179614904750235 0.176572075969495 0.171811428592094 0.173482387343755 0.171656077769018 0.173968920729488 0.176018651239238 0.173305070927280 0.185743983283319 0.174565618357652 0.180706771951028 5 5|0 -|/ 19360571 19361531 19361038.25 19360112 19362265 - gene protein_coding_gene TRUE TRUE AT5G47760.1 ATPK5 (Arabidopsis thaliana serine/threonine protein kinase 5); phosphoglycolate phosphatase serine/threonine protein kinase similar to phosphoglycolate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G36790.1); similar to phosphoglycolate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G36700.1); similar to putative phosphoglycolate phosphatase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD29554.1); similar to Os09g0261300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062708.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IIA; (InterPro:IPR006357); contains InterPro domain 2-phosphoglycolate phosphatase, eukaryotic; (InterPro:IPR006349); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 1.25935827162727 14.4692634596856 2.61075342532669e-08 4.20799019162269e-06 17.2304783944798 13.6942727160470 1.25935827162727 0.0581974016962279 AT5G64830_at 6.27996238305669 6.17380283517917 7.30302892403195 7.6123142194562 7.82328175286753 7.52861667969099 5.99590486668149 6.10847381388486 5.78093183476998 5.40003044032842 6.97555845317031 7.07685595523845 6.85264924384909 7.18322474583943 7.0485159022722 7.35601440684843 6.68728654840456 7.02314955654048 6.11856436464324 0.197461027541628 0.194733960964831 0.199805899812801 0.199908771561045 0.201471900488006 0.208432529266415 0.202552993576342 0.196431800428899 0.211688347594535 0.207818344570828 0.194310264657841 0.197696224851855 0.197459423092353 0.206702606821738 0.193923719457072 0.196587298061367 0.201472214673461 0.205229240086162 0.194170270261898 5 5|0 -|/ 25932143 25932852 25932500.6 25931864 25933850 - gene protein_coding_gene TRUE TRUE AT5G64830.1|AT5G64830.2 programmed cell death 2 C-terminal domain-containing protein similar to zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02220.1); similar to OSIGBa0138H21-OSIGBa0138E01.15 [Oryza sativa (indica cultivar-group)] (GB:CAH67824.1); similar to Os04g0640800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054039.1); similar to B0414F07.2 [Oryza sativa (indica cultivar-group)] (GB:CAJ86029.1); contains InterPro domain Programmed cell death protein 2, C-terminal; (InterPro:IPR007320) 1.3430861954588 14.4559435813263 2.6351801139656e-08 4.2233747096771e-06 17.2230976699585 13.2491310500732 1.3430861954588 0.078625976132522 AT5G10760_at 12.2507523019814 12.5762694030655 13.0158188770706 13.1489275379975 12.8450027026191 12.7563270450448 8.34272792104553 8.5168136409889 10.3682760276694 7.86725608011986 7.87820016875517 8.93420361433867 9.56036997404113 9.13684618483375 8.17514809226533 9.38401179941507 9.52619397348588 9.02020914757713 8.36175463679347 0.205567697720507 0.203836299478516 0.208077029550746 0.211813855216528 0.206047278040757 0.212260022498883 0.206467281172226 0.200772917739836 0.210044091425457 0.231400016597459 0.218765021517631 0.194440114775244 0.194440114775244 0.194440114775244 0.215480979447093 0.194440114775244 0.195618640988441 0.200442176491076 0.218679553001050 5 5 - 3400866 3401233 3401063 3400343 3402204 - gene protein_coding_gene TRUE TRUE AT5G10760.1 aspartyl protease family protein similar to chloroplast nucleoid DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G10770.1); similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] (GB:BAA22813.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.30300692252871 14.4534502290410 2.63978017809362e-08 4.2233747096771e-06 17.2217149942642 20.5904099874933 1.30300692252871 0.0696205835623019 AT5G12350_at 5.95586726802937 6.00937086151275 6.50182473983857 6.62655648584918 6.95723701281947 6.85887076035085 5.1493224608649 4.86356778467861 4.79124142394582 5.00552359552776 6.15071007087536 6.60983095734715 5.91989837088299 6.1765030390081 6.32195203220052 6.32188791398033 6.10801615527313 6.25855826927494 5.10272679615139 0.246149087850753 0.236459840318023 0.241717036376918 0.24457404807525 0.240611370889490 0.248564493157993 0.236574048792904 0.236529201918541 0.242472059394851 0.243250762382390 0.243241246324542 0.235444126244795 0.238196739881246 0.241083173688460 0.237355611839529 0.237797247935142 0.242027904740628 0.243090964934575 0.245196529646233 5 5 + 3999785 4000520 4000171.545 3995343 4000802 + gene protein_coding_gene TRUE TRUE AT5G12350.1 Ran GTPase binding / chromatin binding / zinc ion binding similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G42140.1); similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G19420.1); similar to Pleckstrin-like; Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89832.1); similar to unknown prtein [Oryza sativa (japonica cultivar-group)] (GB:AAT77332.1); similar to putative ZR1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87854.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 1.25425624258672 14.4467674147541 2.65215274363398e-08 4.22756964431669e-06 17.2180073996736 11.7152856082331 1.25425624258672 0.0573310793677228 AT5G35200_at 8.05524320347933 8.06856871974242 8.7809792170492 8.89227922073858 8.94733256432547 8.72634251267656 6.81689755231912 6.79209842550879 7.79007489649643 6.94013550114515 8.47471502372463 8.54981570248076 8.54547099763395 8.372193795285 8.28049620685558 8.48564067311198 7.95174966435927 8.47950555984497 7.41381649538434 0.151782574685809 0.143580456763497 0.150771012208796 0.143798581778768 0.155467637226198 0.151858562906782 0.146588891269766 0.151409915799944 0.143636449187450 0.166244503528700 0.145859131464787 0.148779511201888 0.151436686478958 0.151296856900969 0.143580456763497 0.144765212715331 0.149341513340118 0.143580456763497 0.151569276088573 5 0|5 /|- 13479718 13480412 13480029.111 13479392 13483281 - gene protein_coding_gene TRUE TRUE AT5G35200.1 epsin N-terminal homology (ENTH) domain-containing protein Identical to Putative clathrin assembly protein At5g35200 [Arabidopsis Thaliana] (GB:Q9LHS0); similar to epsin N-terminal homology (ENTH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G01600.1); similar to Os02g0803300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048425.1); similar to Carbamoyl-phosphate synthase L chain, ATP-binding; ANTH [Medicago truncatula] (GB:ABE84582.1); similar to Os06g0175500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056950.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain ANTH; (InterPro:IPR011417); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) 1.20731877933587 14.4331806823059 2.67750259593443e-08 4.25234405587748e-06 17.2104620170592 16.0218630522736 1.20731877933587 0.0430961222143699 AT5G63050_at 6.59662984308097 6.436070060223 7.25677776384147 6.97238090560209 7.1974785554473 7.09932422778295 6.70045483289029 6.53027292603756 5.77073100010912 5.18147787335601 7.3565286888847 7.78659334049214 7.40386593625436 6.88573783832035 8.04866570625841 7.46941095388094 7.06909261498875 6.54094901003963 4.99808748063431 0.178963415066805 0.182227243602775 0.188701101983619 0.178348235245078 0.178152606232869 0.187113176778105 0.180101892242681 0.177174964783981 0.196725872776001 0.186265064665708 0.180504430163562 0.177163726143688 0.177679455352589 0.188724884104051 0.177851799935032 0.179839268617959 0.182596189915129 0.186570521746619 0.185580023721474 5 5|0 +|/ 25311225 25311963 25311661.6 25309661 25312221 + gene protein_coding_gene TRUE TRUE AT5G63050.1 EMB2759 (EMBRYO DEFECTIVE 2759) similar to hypothetical protein MtrDRAFT_AC124952g13v2 [Medicago truncatula] (GB:ABE93587.1) 1.28448675369196 14.4155773944748 2.71074004182526e-08 4.27800645532449e-06 17.2006710158343 13.1671091206164 1.28448675369196 0.0659556641357874 AT5G11680_at 9.0182856908612 9.16242036131137 10.2233414614906 10.2729308592318 10.2048109164466 10.1946781692286 8.81501315845717 8.86368870022119 8.46073314304632 8.71731418854853 9.53883764116588 9.56857767016731 9.65289565743046 9.63127930411638 9.608948168307 9.75814488694585 9.74777506096777 9.43001342673577 8.43175185663787 0.127138814300341 0.129883423129835 0.130168881561962 0.128249029846535 0.135688180800269 0.132241816457759 0.134866838486057 0.132829914405993 0.1514805514601 0.143710687116682 0.126976390752595 0.129665685589163 0.126976390752595 0.13678353313871 0.12851326420813 0.129687548145360 0.126976390752595 0.130279522167238 0.138612290798479 5 5|0 +|/ 3759490 3760598 3760124.125 3758859 3760852 + gene protein_coding_gene TRUE TRUE AT5G11680.1 similar to hypothetical protein TTHERM_00502170 [Tetrahymena thermophila SB210] (GB:XP_001022271.1); similar to Os09g0512900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063646.1) 1.16977381072766 14.4141815395528 2.71339479150901e-08 4.27800645532449e-06 17.1998939103546 18.6712255178513 1.16977381072766 0.0277459533485596 AT5G25760_at 8.42267329858 8.68452985213429 9.26181237057604 9.4342677869865 9.73013550498343 9.66739490167121 8.22141523299054 8.60033180288385 8.25861163484947 7.25502247223254 9.60630395308421 9.59959213460352 9.44243413023986 9.48095472170962 9.27248275698315 9.57021083506307 9.32453307630317 9.27944186344926 7.71529884143627 0.177790980752049 0.159787763513244 0.171058518974755 0.162324067478062 0.164179938028616 0.170179406891417 0.170222827588090 0.158426554750067 0.173137770396789 0.19950891157791 0.159406379014257 0.158426554750067 0.165276148438907 0.166738372306824 0.165552624265915 0.163254090214259 0.170379662270247 0.168689556283417 0.191185513683289 5 0|5 /|+ 8968178 8969131 8968400.111 8967658 8969372 + gene protein_coding_gene TRUE TRUE AT5G25760.1|AT5G25760.2 PEX4 (PEROXIN4); ubiquitin-protein ligase mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to UBC10 (ubiquitin-conjugating enzyme 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to UBC29 (ubiquitin-conjugating enzyme 27), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G16740.1); similar to ubiquitin-conjugating enzyme E2 [Pavlova lutheri] (GB:AAN16047.1); similar to Os02g0634800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047515.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 1.37259081441526 14.4060004958349 2.7290112581427e-08 4.2870385382397e-06 17.195337180053 17.5978060105685 1.37259081441526 0.085801590539565 AT5G27760_at 9.09451477644026 9.05503912182361 10.5125311194453 10.4015630428427 9.64059318274027 9.60634090059901 9.17597589543469 8.97956003929933 7.58751086120803 8.42813584715663 9.48316809470298 9.63177937636952 9.3878005999739 9.3538395170433 9.58063761213556 9.41070365409006 9.58738156916507 9.21429347096149 8.0710907309956 0.109973833649395 0.100862939088858 0.105559131220892 0.108379525355464 0.101591082792407 0.113640500446725 0.100862939088858 0.112348776225618 0.113241955445783 0.110078928893213 0.108864998303902 0.100862939088858 0.106242421343617 0.106908212150813 0.102898236898996 0.100879625511747 0.112180265171914 0.103611776121989 0.101484255873568 5 0|5 /|+ 9830812 9831520 9831236.375 9830347 9831794 + gene protein_coding_gene TRUE TRUE AT5G27760.1 hypoxia-responsive family protein similar to hypoxia-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G05550.1); similar to hypoxia-responsive family protein [Citrus sinensis] (GB:AAZ05072.1); contains InterPro domain Hypoxia induced protein conserved region; (InterPro:IPR007667) 1.19563630508792 14.3915640199443 2.75680799996568e-08 4.31507048061381e-06 17.1872872918700 18.3008212431241 1.19563630508792 0.0400742624475307 AT5G11730_at 5.77406657155407 6.19614567804754 6.95449557262842 7.13609938010482 7.58441133631825 7.08301604029786 5.08811381881363 5.40711264302875 4.59865689905207 4.41200536969543 5.9445492992211 6.11501707460368 6.19672794435032 6.15255714693016 5.56890138176362 5.82778586580326 6.37197606437306 5.99700684523045 4.08704157542299 0.240671911924994 0.241316956876997 0.244328831479351 0.241167930494500 0.248442731979490 0.242221659752378 0.243182603786648 0.24474416289194 0.251486425540405 0.250116951365849 0.241535501964217 0.238884671421073 0.247577723748699 0.244951944127953 0.243809665362764 0.238884671421073 0.250584271970927 0.254991148266349 0.251095334645783 5 5 + 3781919 3782432 3782168.545 3780312 3782714 + gene protein_coding_gene TRUE TRUE AT5G11730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25970.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77886.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) 1.61452991293532 14.3358863096078 2.86693937471409e-08 4.47131077033531e-06 17.1561334294866 11.5967908721865 1.61452991293532 0.129997139282706 AT5G20910_at 6.32600823118029 6.61887742967156 8.1225634799154 8.29739832512781 8.21272574669066 7.88363518942628 6.53547999591096 6.25254372644142 6.75901125819333 6.01257078741768 7.61198171946064 7.12262467882068 7.19636357194964 7.64119042388517 7.20316573805257 7.47702436657733 7.37706435243165 7.32555557806224 5.94033355464746 0.162455160173210 0.155933060194113 0.161805447979369 0.160475520923792 0.160663997180302 0.159769437391672 0.157246958436764 0.152607985624341 0.172875818831737 0.166777659572125 0.152161777013291 0.153136859040081 0.156111252518356 0.158969818833064 0.157179956389809 0.156843168713331 0.158037414107433 0.166562452848173 0.177399311126698 5 5|0 -|/ 7092679 7093534 7093161.667 7092514 7094448 - gene protein_coding_gene TRUE TRUE AT5G20910.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G01980.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); similar to Os09g0434200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063251.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.41395972152891 14.3236949849037 2.89168858257627e-08 4.49374536055358e-06 17.1492890337668 14.0844922674161 1.41395972152891 0.0955244686265778 AT5G23340_at 5.92798977961014 6.24639917213315 6.80845304054947 6.94582185314368 8.24383226020776 7.82556555269536 5.98397767740452 6.1461802647344 5.6169411499299 5.58493537045875 7.09669193672211 6.8773592033655 7.44180227528884 7.22527519484984 7.06218834325414 7.47580806752783 7.57898997116317 7.43669847533436 6.20312544772889 0.187471694135621 0.190963052853899 0.188504595596309 0.195012010093202 0.193912030871932 0.196577850761052 0.195362713585795 0.204040130722084 0.200038131859323 0.202885480857734 0.187783496254738 0.1852417800058 0.190274621731077 0.189857686320814 0.197227615849906 0.184524910934621 0.193140426661299 0.194514242063291 0.189398882024161 5 5 + 7857417 7857962 7857649.182 7856192 7858322 + gene protein_coding_gene TRUE TRUE AT5G23340.1 protein binding similar to F-box family protein (FBL4) [Arabidopsis thaliana] (TAIR:AT4G15475.1); similar to putative F-box and leucine-rich repeat protein [Jatropha curcas] (GB:ABI64127.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 1.42623290695545 14.3089030968576 2.92203028998702e-08 4.51863266560938e-06 17.1409735722027 13.3040369531318 1.42623290695545 0.0981254202951083 AT5G17690_at 5.29188642252687 5.43292031766443 7.13387225455508 6.85902106739749 6.67924319647918 6.75879037662729 5.13000841078816 5.34515385973194 4.63007970359758 4.85718456041387 5.71681577678685 5.74873270516664 5.70780434947045 5.52032813110406 5.76630985716302 6.2016797403811 6.51877255559845 6.02463025246963 5.22444449422822 0.209130506356327 0.211810816608796 0.219105935143313 0.221695259596838 0.211205285837578 0.228741658980443 0.212017269338297 0.211942961051699 0.230705311177994 0.213311382479412 0.207659587740083 0.207659587740083 0.209613646324086 0.211553143277441 0.223850354456638 0.207659587740083 0.207659587740083 0.214415925871148 0.207659587740083 5 5|0 -|/ 5827509 5828214 5827992.889 5827173 5829684 - gene protein_coding_gene TRUE TRUE AT5G17690.1 TFL2 (TERMINAL FLOWER 2); chromatin binding Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. Identical to Protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) (Protein TERMINAL FLOWER 2) (LHP1) [Arabidopsis Thaliana] (GB:Q946J8;GB:Q9FN82); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17160.1); similar to Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) (GB:Q339W7); contains InterPro domain Chromo; (InterPro:IPR000953) 1.27723536134561 14.3057479229066 2.92854711261085e-08 4.51863266560938e-06 17.1391982757024 11.4811305334367 1.27723536134561 0.0665864903245946 AT5G65270_at 8.15294947675953 8.23861443574329 9.09406962851178 9.29960107657701 9.17097247264395 9.13439868371528 8.49252194837545 8.2332003699274 7.75775137493376 7.63394206694431 9.65189416055329 9.36873812868426 8.91526945934725 9.12558809913426 9.26784079432725 9.00786356833943 8.62515497057636 9.0279424673489 7.19496085646453 0.147151154913227 0.142721178222504 0.143937159392927 0.145009116006983 0.142721178222504 0.143107348406705 0.146315999315232 0.143274046950685 0.168095360789743 0.152908275185374 0.142721178222504 0.145815888417835 0.142721178222504 0.150132560234230 0.145952627929928 0.142721178222504 0.152076419689726 0.148934095639933 0.166702272504779 5 5 + 26100754 26101710 26101336.818 26100554 26101940 + gene protein_coding_gene TRUE TRUE AT5G65270.1 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding similar to ATGB3 (GTP-BINDING PROTEIN 3), GTP binding [Arabidopsis thaliana] (TAIR:AT4G39990.1); similar to 80A08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67615.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.24517029879263 14.2523289984701 3.04131991551794e-08 4.67158891348031e-06 17.1090573120610 17.0533766226082 1.24517029879263 0.0594882761757908 AT5G44170_at 4.8138427103932 4.98230820488088 6.11524653668122 6.26466081795575 6.2684493568479 5.85950882060395 4.91360269662693 4.76682800484046 3.92009601358557 3.17492528259194 4.85069622705155 4.77641550323276 5.0139739400176 4.83746444964597 5.37085932270068 4.833921023442 5.02828337816327 4.87860998734889 3.41260051504923 0.221997631766739 0.221997631766739 0.231525779278682 0.228253142829145 0.230393556074531 0.229957317220002 0.221997631766739 0.231137043137942 0.23496747024671 0.225056823653609 0.225234837467454 0.221997631766739 0.224667625183073 0.224380430555801 0.234144628632393 0.221997631766739 0.232817157586234 0.227541770251598 0.228909443513905 5 5 + 17797727 17798224 17797912.182 17797605 17798510 + gene protein_coding_gene TRUE TRUE AT5G44170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08125.1); similar to Os05g0564100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056330.1); similar to DNA ligase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22961.1); contains domain no description (G3D.3.40.50.150); contains domain Diol dehydratase, gamma subunit (SSF47148); contains domain UNCHARACTERIZED (PTHR14614) 1.35202917702247 14.2466614098139 3.05355977963498e-08 4.67158891348031e-06 17.1058500958889 9.72371518495008 1.35202917702247 0.0846873056588173 AT5G65870_at 6.29958981112138 6.68322081587815 7.17297547069057 7.80084382475657 6.90696586608408 7.026914827196 6.32880595763577 6.99707598874939 3.32241896991526 6.49027789426546 7.32859390226551 7.77772184244043 7.74681318544757 7.94854324016215 6.69492424917866 8.82877410490857 7.49617575352911 7.56407320309966 3.80439149578438 0.218040546986876 0.204604140839774 0.211766042357102 0.203845518915964 0.203845518915964 0.226226498811323 0.205014212450230 0.203845518915964 0.230067850938488 0.210655758083354 0.221716507984496 0.209524785731107 0.207671625380356 0.221762795964960 0.217103041373039 0.220974138756534 0.228212082485739 0.208658812910746 0.235618783253359 5 5|0 +|/ 26368822 26369253 26369087.5 26368734 26369493 + gene protein_coding_gene TRUE TRUE AT5G65870.1 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR); growth factor Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor. Identical to Phytosulfokines 5 precursor (AtPSK5) [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] (PSK5) [Arabidopsis Thaliana] (GB:Q9FEB4;GB:Q7PCB7); similar to ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR), growth factor [Arabidopsis thaliana] (TAIR:AT3G49780.1); similar to TPA: TPA_exp: putative phytosulfokine peptide precursor [Mesembryanthemum crystallinum] (GB:DAA00288.1); contains InterPro domain Phytosulfokine; (InterPro:IPR009438) 1.89196241782145 14.2436879745099 3.06000274996611e-08 4.67158891348031e-06 17.1041667475827 13.0081650144893 1.89196241782145 0.173259094161072 AT5G48480_at 6.8149631872017 7.61848140935568 7.92519510815579 8.19215989094838 8.93290800050714 8.67446313894648 6.91211021943459 7.37912526211574 3.98048425063352 4.90261738267448 6.91515515095549 7.24558275655763 6.97153467795896 7.33713800499733 7.06837850928825 6.97614333083761 7.64970259877976 6.84142046075113 4.90291809440641 0.223883492371864 0.214842086210239 0.22443832529305 0.215376055171491 0.225469377693978 0.221192361655504 0.220504317350289 0.216359903392435 0.252261438677838 0.227052507504895 0.222913459533727 0.217707301330684 0.216395365675515 0.225820099187332 0.217088417354091 0.218031253883667 0.218025754496880 0.224303406745664 0.248644066733638 5 5 + 19662062 19662848 19662435.545 19661901 19663115 + gene protein_coding_gene TRUE TRUE AT5G48480.1 Identical to Protein At5g48480 [Arabidopsis Thaliana] (GB:Q9LV66); similar to early tobacco anther 1 [Medicago truncatula] (GB:ABE79314.1); contains domain no description (G3D.3.10.180.10); contains domain Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (SSF54593) 1.89015177107007 14.2325932791777 3.08417434452652e-08 4.691969740226e-06 17.0978813452076 13.6666616998351 1.89015177107007 0.173211079977367 AT5G66160_at 7.28937069668541 7.08959703950747 8.20466005700152 8.31766881757368 8.51472356160654 8.30972955036446 6.95656283076321 6.51946501791528 6.07514011407494 6.43117023258136 7.22220708841633 7.49467386997726 7.91453683580094 7.61974379547961 7.40822391374435 7.82404912478794 7.89117208117843 7.62670745592408 6.16332313989622 0.166137983563303 0.164562197347267 0.163502128338111 0.159774413759618 0.164142903949641 0.165037271058965 0.158221253074312 0.164818376813598 0.170459888546632 0.200849738159805 0.165874226495486 0.158221253074312 0.160226430639288 0.170050375298111 0.170907554455865 0.158221253074312 0.173059605799077 0.168424032784366 0.198880749960062 5 5 + 26463053 26464075 26463437.273 26462312 26464659 + gene protein_coding_gene TRUE TRUE AT5G66160.1|AT5G66160.2 JR700 (Arabidopsis thaliana receptor homology region transmembrane domain ring H2 motif protein 1); peptidase/ protein binding / zinc ion binding Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. similar to protease-associated zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G71980.1); similar to ReMembR-H2 protein JR702, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94173.1); similar to Os03g0167500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049082.1); similar to Os08g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060777.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.38744985444908 14.212349189405 3.12881747742753e-08 4.74324260341442e-06 17.0863948016752 14.5744099128511 1.38744985444908 0.0925086098493492 AT5G18110_at 8.27269193210087 8.11428636415032 9.0295000119766 9.17420325751235 9.3254814121124 9.20166872264199 7.36378991834796 7.49628897486244 7.73094412872224 6.99061346849437 8.18051547686786 8.20662917694637 8.35971652507496 8.15856843283513 8.42419756041516 8.46473361878208 8.2559714443566 8.10479222322797 6.98474830772802 0.163761531821429 0.163637020944855 0.176528503948338 0.172714340566820 0.180612162416994 0.177413987880437 0.174037866832548 0.165633633840966 0.156391354385885 0.168204657171558 0.159058849099595 0.156391354385885 0.162037529890699 0.162637119380001 0.165990480489810 0.156391354385885 0.170139240000740 0.159721219068880 0.167502137131574 5 5|0 -|/ 5989123 5990492 5989802.444 5988746 5990683 - gene protein_coding_gene TRUE TRUE AT5G18110.1 NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding / translation initiation factor Identical to Eukaryotic translation initiation factor 4E type 3 (eIF4E type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) [Arabidopsis Thaliana] (GB:Q9FK59;GB:O64928); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to Eukaryotic translation initiation factor 4E (eIF-4E) [Medicago truncatula] (GB:ABE86407.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) 1.20245215468025 14.1824018315268 3.19615557598967e-08 4.82844352928716e-06 17.0693603310570 16.2496517536939 1.20245215468025 0.0486147899437767 AT5G08335_at 6.72238106413547 7.07140601231904 8.31120715421402 8.10310731468554 8.3973097048098 8.1509673541519 6.37475386754177 6.25405203266488 5.37781309185088 5.35758676024758 6.12588786763042 6.03555376052293 6.84068972552418 6.74500339002638 6.46183568218574 6.71519651481323 6.62369316458942 6.32718628437912 5.55099295053743 0.241194194308128 0.233887121153384 0.239697770469264 0.233887121153384 0.243705942903173 0.236513916504403 0.235260940428086 0.233887121153384 0.240909781211636 0.250759867918813 0.237178388058607 0.235883157450094 0.233887121153384 0.243094783069986 0.233887121153384 0.235909172642301 0.255304468797079 0.242700903692365 0.248110442762778 5 5 + 2683029 2683570 2683236.455 2682230 2683713 + gene protein_coding_gene TRUE TRUE AT5G08335.1 ATSTE14B (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE); protein-S-isoprenylcysteine O-methyltransferase similar to ATSTE14 (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE 14A), protein-S-isoprenylcysteine O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G23320.1); similar to OSJNBa0041A02.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE01825.2); similar to PREDICTED: similar to Protein-S-isoprenylcysteine O-methyltransferase (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT) isoform 1 [Canis familiaris] (GB:XP_546748.1); similar to Os04g0602900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053777.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) 1.34529141781516 14.167678368153 3.22983987149654e-08 4.84871671590372e-06 17.0609668767777 13.3797372628591 1.34529141781516 0.0848457640164768 AT5G20730_at 8.2699594135873 8.34583509924293 9.24346332695722 9.27964418760645 9.15204710002264 9.0472587662821 7.26024931566859 7.49874461145655 7.70709604755203 7.43904193441897 8.77137068313053 8.81982911145626 8.791575715467 8.52871017634017 8.59681056940634 8.71790571535897 8.4260626018106 8.68230388502593 7.68096601201785 0.145051619349951 0.143951629249841 0.144329623500264 0.145037834301566 0.139489322340955 0.145378300403837 0.144364140099431 0.143779874151868 0.149030108718538 0.149173536430508 0.149178106216688 0.142194791579907 0.139489322340955 0.144484300866565 0.144047253843421 0.141024467386202 0.161233160058457 0.145262080956161 0.142605458248582 5 5 - 7016706 7017344 7017035.545 7016447 7022115 - gene protein_coding_gene TRUE TRUE AT5G20730.1|AT5G20730.2|AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.|Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. Identical to Auxin response factor 7 (Non-phototropic hypocotyl 4) (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) (ARF7) [Arabidopsis Thaliana] (GB:P93022;GB:O24411;GB:P93023;GB:Q8RXZ7;GB:Q9LCZ5;GB:Q9SBK4;GB:Q9SYQ6); similar to ARF19 (AUXIN RESPONSE FACTOR 11), transcription factor [Arabidopsis thaliana] (TAIR:AT1G19220.1); similar to Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation [Medicago truncatula] (GB:ABE90964.1); similar to auxin response factor 1 [Cucumis sativus] (GB:BAD19061.1); similar to putative auxin response factor 7a [Oryza sativa (japonica cultivar-group)] (GB:BAD10267.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525) 1.19734631390739 14.1667652295009 3.23194165313879e-08 4.84871671590372e-06 17.0604459174086 16.6500780885592 1.19734631390739 0.0473698303179124 AT5G20270_at 5.32314341928266 5.67739596010013 7.1535429115919 7.39767557450879 8.58481376948876 8.48617239881583 7.85215256092871 8.02294103048738 8.11648589990799 7.22732029068894 10.0629913713327 9.27834035457281 9.54895007820913 9.64892145907178 9.01952589909404 8.47705715722978 8.22943762088 8.96278132877235 7.71874479399763 0.219739045122021 0.214586200652507 0.187801652297493 0.197933446921556 0.188418796937332 0.187801652297493 0.201642956130258 0.193866486497737 0.200553271982596 0.192868286281692 0.187801652297493 0.187801652297493 0.187801652297493 0.191456821283567 0.188247394823628 0.187801652297493 0.193409599495080 0.194242104377461 0.192461441674619 5 5 - 6841029 6841602 6841320.818 6840835 6842860 - gene protein_coding_gene TRUE TRUE AT5G20270.1 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors similar to HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) [Arabidopsis thaliana] (TAIR:AT4G30850.2); similar to Hly-III related proteins [Medicago truncatula] (GB:ABE86349.1); contains InterPro domain Hly-III related proteins; (InterPro:IPR004254) 1.32631329234104 14.1137379390219 3.35659002593062e-08 5.01835573985312e-06 17.0301120218125 15.7327385299056 1.32631329234104 0.0819033995416974 AT5G27520_at 5.92508792991759 6.39790175506297 6.84474923804157 7.37054277283478 7.68527132469823 6.81587104099456 4.10465287409283 4.11474289546159 3.14790605840146 2.63820420568425 4.85248723877791 4.78975936964126 5.6083008423226 5.08309644593731 4.27252504165481 4.8133558951761 4.98005119569295 4.99744052157920 2.99559091409725 0.260731314871159 0.263667178391232 0.276022607921145 0.263286158469279 0.263949708065281 0.265102535052191 0.257856390168194 0.258631620079021 0.269335384054221 0.265053720705793 0.258107213801285 0.257866556983278 0.257856390168194 0.264716694396963 0.260217593509524 0.257856390168194 0.268186065260230 0.266794909128542 0.260094393432864 5 0|5 /|- 9714718 9715312 9714965 9714385 9716357 - gene protein_coding_gene TRUE TRUE AT5G27520.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G05290.1); similar to Os05g0392700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055452.1); similar to Mitochondrial FAD carrier protein (ISS) [Ostreococcus tauri] (GB:CAL50155.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 2.02045278664766 14.1064565919505 3.37411117013938e-08 5.02721594708083e-06 17.0259343067843 10.0832828763424 2.02045278664766 0.193942510460126 AT5G13240_at 7.68705208443855 7.98539799780756 9.13734173930956 8.96242333667286 9.24643477297102 8.89165529793214 8.50264371695269 8.64836117804127 8.13860166004056 7.57703105449581 9.72108876044923 10.0289586739651 9.67571841346317 9.70845930069328 9.68816388673015 9.98463632046297 9.4649338394821 10.0094076180861 8.04600234649265 0.1786390543354 0.169658520461164 0.17646404523383 0.17635751975513 0.172239339071727 0.167597195874216 0.179135665556354 0.172086808329636 0.191320039887003 0.183863043715682 0.174534420595599 0.172126184980106 0.170283280489202 0.177781174707352 0.178036340170249 0.166464872030828 0.184359496178833 0.167296101391827 0.176331577949695 5 5|0 -|/ 4225309 4226624 4225990.875 4225008 4227616 - gene protein_coding_gene TRUE TRUE AT5G13240.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92223.1); contains domain FAMILY NOT NAMED (PTHR22504); contains domain gb def: Hypothetical protein T31B5_60 (PTHR22504:SF5) 1.35911293686744 14.0823275715405 3.43288919123118e-08 5.09727513613093e-06 17.0120685439936 17.4855217015205 1.35911293686744 0.0893721013336635 AT5G53480_at 7.42288004618243 7.58688011180942 8.74298529850497 8.68637403378732 8.56261807279615 8.57834606387612 7.37963653962855 7.82321221600809 7.56294864754281 7.37963552716493 9.00182471981344 8.93203862127077 9.13296860748635 9.07074405219909 8.71020359414492 9.047963613625 8.75832189329588 8.64067519428976 7.11606126834712 0.124842021867398 0.121533195959728 0.125497343245635 0.126651426082270 0.127090109785101 0.123635668795532 0.134631905913578 0.126295409459809 0.132044686461202 0.131415399750614 0.122411123610837 0.124372121650323 0.122145209106436 0.124957422433539 0.122606380693727 0.122026146192913 0.126288503388026 0.126903154723535 0.134350759342027 5 5 + 21733303 21734375 21733907.636 21730592 21735008 + gene protein_coding_gene TRUE TRUE AT5G53480.1 importin beta-2, putative similar to protein transporter [Arabidopsis thaliana] (TAIR:AT2G16950.2); similar to Importin beta-like protein [Oryza sativa (indica cultivar-group)] (GB:CAC79691.1); similar to Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) (ISS) [Ostreococcus tauri] (GB:CAL52524.1); similar to Importin-beta N-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95425.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 1.32419468074902 14.0631568363364 3.48038458699234e-08 5.14456642849383e-06 17.0010283605206 16.2302287235078 1.32419468074902 0.082470598971505 AT5G64220_at 7.12627853974155 7.25101612238862 8.02154533668867 8.31204882499962 8.25576905783604 8.08128845145051 7.16085561407382 7.07073672622711 5.62644522012775 6.70311305503291 7.68394753814465 7.81763370238308 7.80783797359893 7.76628671469135 7.63068047243692 7.94454442059908 7.71240983796327 7.28947705510526 6.3560056585245 0.177336152051267 0.169427524253645 0.169427524253645 0.172159531234146 0.174211053002870 0.170436908966196 0.171151401941619 0.177948699840163 0.202585736104058 0.178625622569742 0.174495612205744 0.169427524253645 0.174184878522631 0.169427524253645 0.176019498005564 0.169427524253645 0.174921928032696 0.182602214951618 0.17952163856072 5 5 + 25708393 25709082 25708689.4 25703434 25709476 + gene protein_coding_gene TRUE TRUE AT5G64220.1|AT5G64220.2 calmodulin-binding protein|calmodulin binding Identical to Calmodulin-binding transcription activator 2 (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) (CMTA2) [Arabidopsis Thaliana] (GB:Q6NPP4;GB:Q9FMG3); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.1); similar to EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN), calmodulin binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT5G09410.1); similar to anther ethylene-upregulated protein ER1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94398.1); similar to calmodulin-binding transcription activator [Brassica napus] (GB:AAM10969.1); similar to Putative calmodulin-binding protein similar to ER66 [Oryza sativa] (GB:AAM08530.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 1.24676103513643 14.0599217880688 3.48846979829407e-08 5.14456642849383e-06 16.9991632634671 14.6275040969726 1.24676103513643 0.0644071790076101 AT5G27930_at 8.30053968143968 8.0989257417582 9.1423394960868 9.07262174741867 9.35907864227934 8.86535832190694 7.69510147137397 7.44679883010797 5.65756761143987 7.0052521323535 7.91103396531032 7.82170519023703 8.23825120127146 8.01385532915826 7.53627992764157 7.73555706828498 8.36435298546055 8.09188578752053 6.36100674289874 0.204081101206407 0.203989866856877 0.206472323926136 0.19506398246396 0.198947064909276 0.202799264171913 0.199787169425435 0.19506398246396 0.219518756030253 0.212740933864648 0.203258387990157 0.200497932710900 0.204049053944828 0.201266276322073 0.209132357199069 0.196707374612002 0.204245900719446 0.19506398246396 0.207728818242689 5 5 - 9958230 9959515 9958930.091 9958094 9961268 - gene protein_coding_gene TRUE TRUE AT5G27930.1|AT5G27930.2 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G05640.2); similar to Protein phosphatase 2C-like [Medicago truncatula] (GB:ABE85677.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.42367390352477 14.0497252255349 3.51408784942333e-08 5.15154417058992e-06 16.9932807325322 15.6502908302588 1.42367390352477 0.102515383347117 AT5G48500_at 3.23859201627626 2.86716392701971 3.62709871081101 3.87079496466198 4.23630793193743 3.97911202540287 2.446296686645 2.76476429980079 2.22042311500091 2.64989671020496 4.19316508392683 4.80241552644792 4.71521089514823 3.89098359263775 4.58491255380931 3.82810426931346 3.93063985915024 4.12068133195918 2.59484478706392 0.233975586915089 0.225701652506659 0.231676985949219 0.228607687847712 0.225701652506659 0.235649384937507 0.228530933539081 0.236038896319738 0.233273806959424 0.230490732113502 0.232107529113563 0.226250174519916 0.231868517396160 0.229142033098224 0.227846484712088 0.225701652506659 0.240407395454523 0.228376856463488 0.225701652506659 5 5|0 +|/ 19670583 19671218 19670798.7 19670217 19671470 + gene protein_coding_gene TRUE TRUE AT5G48500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10930.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79320.1) 1.43450005536353 14.0485852773566 3.51696459718963e-08 5.15154417058992e-06 16.9926227110071 6.7520924918889 1.43450005536353 0.104539634539992 AT5G60710_at 5.94849454929867 6.34984897333066 6.09778581797636 6.2842866681153 7.77859559543259 7.01125937854004 4.24344656413972 4.38890554950297 5.20841470330643 4.89892215075996 7.4981021469921 7.0588974054301 7.04300983407545 7.13128903921887 7.03163936900282 6.74549643071177 6.41728999362703 6.66208706163568 4.9655353559946 0.223568018996330 0.219247367626214 0.226873934050436 0.225835937277209 0.225977143823756 0.233532321181006 0.229928505576778 0.231209065251424 0.247188508724686 0.222307842663514 0.234456720722735 0.232952792868311 0.226575400249259 0.227639818727200 0.227798360772570 0.224243869255411 0.233038177792194 0.237860632601643 0.228954923409139 5 5 - 24428181 24428543 24428345.545 24427944 24432294 - gene protein_coding_gene TRUE TRUE AT5G60710.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G54780.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G38970.1); similar to Os02g0806700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048450.1); similar to Hypothetical protein protein containing a von Willebrand factor type A domain [Oryza sativa] (GB:AAK98695.1); similar to Os02g0619600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047451.1); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.7422468146739 14.0311109240150 3.56138523085017e-08 5.19904583732326e-06 16.9825265134781 11.9992114604289 1.7422468146739 0.155347878768645 AT5G58290_at 10.6617878018046 10.8462255215823 11.7129627950646 11.7210101005298 11.5422648863216 11.5438405799473 10.2015941201899 10.2366823603040 9.64896293095602 9.87930489912893 10.8965798896281 10.8399336002060 10.8530774141098 10.8504275408535 10.8752354266161 10.8546681851612 10.9618579459660 10.7286988400344 9.58988298316973 0.0936207272023094 0.0924066427076002 0.0927948188285037 0.0925946708471044 0.0924066427076002 0.0984709918928494 0.0938903912933168 0.0942333452758274 0.0986421775960854 0.0924066427076002 0.09319041093185 0.0927968584105985 0.0960772055005671 0.0946130769471394 0.0961753617318344 0.0924066427076002 0.0955334435398855 0.096596690177226 0.106500644256719 5 5|0 +|/ 23587119 23588277 23587603.1 23586288 23588566 + gene protein_coding_gene TRUE TRUE AT5G58290.1 RPT3 (root phototropism 3); ATPase 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, Identical to 26S protease regulatory subunit 6B homolog (26S proteasome AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) (RPT3) [Arabidopsis Thaliana] (GB:Q9SEI4); similar to RPT2A (regulatory particle triple-A 2A), ATPase [Arabidopsis thaliana] (TAIR:AT4G29040.1); similar to 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)] (GB:BAB78494.1); similar to AAA ATPase, central re (GB:ABE77697.1); similar to 26S protease regulatory subunit 6B homolog (GB:P54778); contains InterPro domain 26S proteasome subunit P45; (InterPro:IPR005937); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.14747836186633 14.0240917289576 3.57940018576243e-08 5.20781004087372e-06 16.9784660777111 21.3401010839214 1.14747836186633 0.0325212486057782 AT5G64440_at 8.15264086345249 8.19835828216052 8.85820918261692 8.77978989207874 9.59478170491748 9.05734072178667 7.57821475936368 7.30868123173629 7.98211305541546 7.08680813009958 9.0419886710446 9.28256073462061 8.9617339219716 9.15998945236952 8.72617169253992 9.07161933626727 8.48532052375402 9.06968045656032 7.03712126765345 0.188284850063886 0.178828561895304 0.188470979869136 0.183069798963745 0.177060209011469 0.178831416730276 0.199878283742495 0.182696351037549 0.185488021444174 0.183215389358305 0.178179280729455 0.180909094912876 0.178939104528012 0.18227853017822 0.176523963231881 0.176523963231881 0.191624981923188 0.178508118379127 0.187201096846189 5 5|0 +|/ 25786151 25787273 25786572.625 25782976 25787726 + gene protein_coding_gene TRUE TRUE AT5G64440.1 amidase family protein AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. similar to glutamyl-tRNA(Gln) amidotransferase, putative [Arabidopsis thaliana] (TAIR:AT3G25660.1); similar to OSIGBa0123D13.5 [Oryza sativa (indica cultivar-group)] (GB:CAH65756.1); similar to Os04g0102700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051996.1); similar to N-acylethanolamine amidohydrolase [Medicago truncatula] (GB:AAZ04133.1); contains InterPro domain Amidase; (InterPro:IPR000120) 1.43462943604493 14.0132838409927 3.60733341799525e-08 5.2158071603508e-06 16.9722084308129 16.612784037946 1.43462943604493 0.105226741840904 AT5G07300_at 6.85043425247934 6.65314481740515 7.81521781833845 7.72646448417099 7.90252465045038 7.67296971833036 6.4363316622482 6.07044480672223 5.94971199904414 5.42132120810176 6.87769912018209 7.14221904289053 7.09661027896347 6.45470333813062 7.04938315319435 7.10031614360436 7.2719095369756 6.5633186407568 5.34441899779187 0.182179737664499 0.178909524434135 0.192585642721721 0.187307248381694 0.187621368745701 0.187360053147329 0.187200217323427 0.183656793191778 0.206438650484872 0.191395035773207 0.182731359382444 0.179070326062412 0.177206164455143 0.183359189715903 0.191651815799014 0.179954957146830 0.190320818114099 0.189863984818159 0.183174939977917 5 5 + 2302110 2302811 2302421.455 2299888 2303269 + gene protein_coding_gene TRUE TRUE AT5G07300.1 BON2 (BONZAI 2) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. similar to BON1 (BONZAI1), calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G61900.3); similar to BON3 (BONZAI 3) [Arabidopsis thaliana] (TAIR:AT1G08860.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT58837.1); similar to Os02g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046976.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.32470389415006 14.0126586749812 3.60895642658214e-08 5.2158071603508e-06 16.9718462608540 13.3991101805097 1.32470389415006 0.0835997211167716 AT5G62900_at 6.28228463931623 6.2533695457007 6.46224477884726 6.37284408656174 6.70036438365489 7.07616419751472 3.29649189127216 3.52595159325706 4.24659268606502 3.76316674246015 4.74283878792173 4.7086003081838 4.7419586231429 4.59957696147456 4.80541289347919 4.85525644802743 4.92908886373524 4.51409757417733 3.85658893683371 0.294576133828921 0.290029916706861 0.294969317473886 0.291076180939136 0.307506587015161 0.291737702702453 0.284131511832852 0.289816026131743 0.293808065080707 0.290280462879953 0.281009743909720 0.281009743909720 0.288711559454663 0.287842624014615 0.281009743909720 0.281009743909720 0.285663575795733 0.284828062504263 0.281009743909720 5 5|0 +|/ 25266130 25266915 25266473.9 25266023 25267150 + gene protein_coding_gene TRUE TRUE AT5G62900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G50090.1); similar to Os09g0381600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063061.1); similar to T10O24.15, related [Lycopersicon esculentum] (GB:AAX95759.1) 1.29751714832813 13.9996741158202 3.64284651551605e-08 5.24729547792426e-06 16.9643189781644 10.0924910208343 1.29751714832813 0.0779141646024541 AT5G49550_at 7.12708345959076 7.3048871843949 8.05894351029018 8.192320927903 8.81542314918078 8.26343657981458 7.07017134555153 7.04489840685382 5.96223505171827 6.62982403158389 8.44087129665435 8.13823279592824 7.87778625817956 8.01470417107961 8.2129975389205 7.5526052780329 7.92891134658347 7.58491721073946 6.37852312604069 0.179404013457936 0.178025594823282 0.176615015933384 0.178956439835276 0.18157266962931 0.190667940882597 0.185175684437958 0.183747692755011 0.187096524801658 0.194631312649504 0.181437289766466 0.183121682943676 0.179913396994196 0.183482524512492 0.180788298069135 0.176615015933384 0.184803676248603 0.187005585936292 0.190542926443904 5 5|0 -|/ 20123937 20124356 20124115.6 20123879 20124417 - gene protein_coding_gene TRUE TRUE AT5G49550.1 similar to hypothetical protein DDBDRAFT_0205421 [Dictyostelium discoideum AX4] (GB:XP_642335.1); similar to Os02g0190900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046154.1); contains domain gb def: Hypothetical protein (PTHR10668:SF1); contains domain PHYTOENE DEHYDROGENASE (PTHR10668) 1.42056088829993 13.9896585364442 3.66922442943293e-08 5.26779026986466e-06 16.9585061980598 14.8808483905120 1.42056088829993 0.103070229573639 AT5G65140_at 6.31864326929139 6.46095114035526 8.06063116080503 8.3405821529224 7.94523602110976 7.63706352021333 7.19744916463523 7.18282229227127 2.66169889841227 3.22481131358519 2.97961958096661 4.17535337489131 5.13083811917297 3.88161725758098 3.06502416568894 5.41973682650359 4.95567032320077 3.73414432281773 2.50553936859313 0.322728900772658 0.32013740519861 0.32013740519861 0.32013740519861 0.335170790068726 0.32013740519861 0.321348175475442 0.327731790476558 0.339321820370292 0.328196385419557 0.324835105289102 0.32013740519861 0.320310848041299 0.32013740519861 0.329448650115374 0.32013740519861 0.326028706807888 0.32118140455412 0.334032101033465 5 5|0 -|/ 26037276 26038134 26037830.25 26036814 26039448 - gene protein_coding_gene TRUE TRUE AT5G65140.1 trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G10100.1); similar to 117M18_9 [Brassica rapa] (GB:AAZ66928.1); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337); contains InterPro domain HAD-superfamily hydrolase subfamily IIB; (InterPro:IPR006379) 1.28815619164017 13.9808912758026 3.69248557656560e-08 5.28368990627264e-06 16.9534131526631 10.8754725184753 1.28815619164017 0.0761850085791832 AT5G17190_at 10.0127744573003 10.2485096118019 10.6604612537955 10.8809130554830 10.6776391473539 10.1760116965119 9.013132893225 9.30577753785244 8.47103543295083 7.78071074809046 10.1466238360009 10.2468881390608 9.9863786285563 10.0699965380159 10.0696220939000 9.91992698291553 9.5052077236811 9.7212472950564 7.57792364594165 0.141719033947691 0.142180597256713 0.142739491844946 0.143820721266082 0.140653539125334 0.153993308799282 0.141799630417868 0.137466783379127 0.150367717036346 0.152058806581874 0.141900003524611 0.138449339562448 0.138152218191845 0.139535849473668 0.137928430718678 0.141964348735556 0.153182127078768 0.150269051740813 0.145224129496500 5 5 + 5652312 5652619 5652478.455 5652220 5652985 + gene protein_coding_gene TRUE TRUE AT5G17190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03160.1); similar to Erwinia induced protein 2 [Solanum tuberosum] (GB:AAO32066.1) 1.48436039611428 13.9681409262160 3.72660189892769e-08 5.31288405023508e-06 16.9459983302480 19.0726322968202 1.48436039611428 0.114979301184422 AT5G58787_at 7.76400665440297 7.95574637996757 8.96887121314083 8.54740323639079 9.11306279958507 8.67952277007061 5.95317238846472 6.04551433375724 5.51234742482609 6.40879484730984 7.05520657408237 6.95632272891628 7.29050953910913 6.89872299781794 6.79444642058712 7.62757850766202 6.76558822663657 7.17643829299694 6.21731461026448 0.264839399611499 0.264839399611499 0.266652776784001 0.264839399611499 0.26962136232179 0.279059855134260 0.268362393117904 0.267690226072332 0.281987069780656 0.266463444835554 0.266683636236596 0.267957465442223 0.268292806385513 0.280720665597758 0.272368678522466 0.264839399611499 0.273102785244074 0.274365574260613 0.264839399611499 5 5|0 +|/ 23760730 23761522 23761226.5 23759676 23761845 + gene protein_coding_gene TRUE TRUE AT5G58787.1|AT5G58787.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to Os04g0679800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054282.1); similar to H0801D08.18 [Oryza sativa (indica cultivar-group)] (GB:CAJ86260.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.46102721624564 13.9641335649294 3.73739529755740e-08 5.31288405023508e-06 16.9436659499917 14.4367894495272 1.46102721624564 0.110928359401925 AT5G10860_at 11.8759885035349 11.8603982511971 12.3754079668408 12.2610408513258 12.6958156299974 12.7587920586360 10.6092907866768 10.6167962774894 10.2474016160108 10.1610015701367 11.1298739741044 10.8971938725284 11.3424403160480 11.3085881758657 10.8982534582361 11.1221128727589 11.4976178684579 11.3851282364580 10.2866864563848 0.088160294595504 0.0853625148907652 0.0872738792855439 0.0893780219036525 0.0873723645993023 0.0859135281247848 0.0890998149171268 0.0892437697618862 0.0912210514693468 0.0927760062592042 0.087303104789979 0.0853625148907652 0.086040830041782 0.0853625148907652 0.0884646185091352 0.0853625148907652 0.094639540113557 0.0859228988489018 0.0883725824458477 5 5 - 3429196 3430082 3429793.364 3428892 3430471 - gene protein_coding_gene TRUE TRUE AT5G10860.1 CBS domain-containing protein Identical to Protein At5g10860, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9LEV3); similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63490.1); similar to CBS1 [Hyacinthus orientalis] (GB:AAT08729.1); contains InterPro domain CBS; (InterPro:IPR000644) 1.12405011063594 13.9513835853242 3.77196326432463e-08 5.34450109431965e-06 16.9362389628513 22.5963651128712 1.12405011063594 0.0227915397092004 AT5G59410_at 5.66978987958541 6.3131403731338 7.27695249461996 7.24558372418578 7.63227522782144 7.5359866184571 5.45162670454376 5.88966647484506 5.46588507872271 5.69710931147974 6.98241189188089 7.73293378965471 7.52613485136806 7.00497944917195 6.82355508054367 7.12302157620171 7.05970883404585 7.09714356869972 5.48824387665084 0.218651984661569 0.216855061330449 0.21954358689417 0.221200152363791 0.222055275809642 0.220391420411961 0.223653020590219 0.217319682464585 0.240421498576886 0.221724844003225 0.216248313806553 0.220976884205583 0.216248313806553 0.227660933690592 0.216462364428747 0.216248313806553 0.231387370455519 0.216248313806553 0.225624673189881 5 5|0 -|/ 23976995 23977886 23977452.222 23976799 23978104 - gene protein_coding_gene TRUE TRUE AT5G59410.1 similar to Rab5-interacting family protein [Arabidopsis thaliana] (TAIR:AT2G29020.1); similar to Os05g0110600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054441.1); similar to hypothetical protein [Oryza sativa] (GB:AAK73154.1); contains InterPro domain Rab5-interacting; (InterPro:IPR010742) 1.60498351641106 13.9329775501236 3.82248212890961e-08 5.39843939970905e-06 16.9255006204995 12.9864521300558 1.60498351641106 0.135826877696295 AT5G18680_at 8.04991261762655 8.43745845324967 8.46007640781883 8.84427368062725 9.46014006457552 9.32182632000604 7.49162181562718 7.62447418663594 7.40749219935158 7.08845051004713 8.96900295956664 9.03472766335046 9.38360929019117 8.96771850164934 8.83190265331558 9.21053732203923 9.1433847721089 9.19635600693984 7.7557400607403 0.176128294837805 0.179445851874475 0.177471523486874 0.175826896632929 0.176295770772266 0.180806460204361 0.176797172659585 0.180483843118732 0.210954802902286 0.182816855043821 0.173419702215011 0.176321996076145 0.171484269829638 0.184154976780834 0.178987965229965 0.175939538092666 0.191281453370945 0.177575152325172 0.18695841362877 5 5|0 -|/ 6228395 6229091 6228630.4 6228167 6230539 - gene protein_coding_gene TRUE TRUE AT5G18680.1 AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor Member of TLP family similar to ATTLP9/AtTLP9 (TUBBY LIKE PROTEIN 9, TUBBY-LIKE PROTEIN 9), phosphoric diester hydrolase/ protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06380.1); similar to Tubby protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95936.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Tubby; (InterPro:IPR000007) 1.39781982803544 13.9205739686409 3.85694179490968e-08 5.42942090610327e-06 16.9182530810781 16.7159141863666 1.39781982803544 0.100099784602664 AT5G37480_at 6.96396500907276 7.19793718232008 8.16566389916636 8.08854052398716 7.99934229376971 7.35426095418243 5.76602440764731 5.6387951561404 6.35138736662555 4.96276891896645 7.2909992010329 7.64280919059998 6.39317078017072 7.57243399329456 6.50294708300377 6.96808376943608 6.72553039561404 6.69237085147709 5.04914732256205 0.259918532905791 0.255843508831564 0.260235348880241 0.25961635720662 0.277663383657145 0.263982965134191 0.266124261242514 0.261806482540517 0.263019890885246 0.284279557835661 0.260203865311858 0.257309084283806 0.258660013983105 0.266775780665144 0.255536130161297 0.251708187376770 0.262275985409579 0.271440144361103 0.269072752776331 5 0|5 /|- 14901710 14902553 14902089 14901561 14903199 - gene protein_coding_gene TRUE TRUE AT5G37480.1 similar to Os03g0748600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051270.1) 1.51469005050429 13.8988032209476 3.91824681677149e-08 5.49064102845425e-06 16.9055105267191 13.3608050253508 1.51469005050429 0.121509541964155 AT5G41260_at 6.45677496542956 6.75601890177594 7.78399920989743 7.78089175281229 9.04158570115273 7.70477286529265 4.40970098621419 4.29713542732665 4.79084034675713 4.31504846024542 6.76303727146505 6.27181889660236 6.81855885175885 6.80784219132308 6.65891962027079 6.48746429180283 5.98207264905084 6.48986982666088 4.42356560741860 0.270337631844888 0.268825970402892 0.268389454661682 0.273819042715991 0.273829526200905 0.269757847824775 0.270053069311953 0.277817257563391 0.29274563473085 0.271543681416713 0.269447228861644 0.27102073257805 0.271571573705631 0.27731310862075 0.272642366030447 0.268986114760939 0.284737820765515 0.282310968943869 0.27797980307715 5 5|0 +|/ 16523070 16524061 16523497.6 16521002 16524703 + gene protein_coding_gene TRUE TRUE AT5G41260.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G63500.1); similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82930.1); similar to Protein kinase [Medicago truncatula] (GB:ABE92129.1); similar to H0913C04.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86160.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 2.31151731191432 13.8923848863333 3.93652251878155e-08 5.49064102845425e-06 16.9017485535319 12.3012430202413 2.31151731191432 0.237866525063173 AT5G26830_at 7.44462267302888 7.48346557585665 8.2354602912891 8.29639934473356 8.37699421412509 7.99792828498328 7.2572366172782 7.27377166456969 6.5319442736893 6.80313804182552 8.54173180384924 8.40478956749791 8.34174683786571 8.18822765504998 8.58056829650199 8.46949364309515 8.1429794174647 7.64596515897169 6.67136314674574 0.134306656492838 0.130528628911490 0.135616438686378 0.137307727745699 0.138060945009922 0.133264831002955 0.136513477932490 0.129493193844371 0.151938302270269 0.142270456042867 0.132247762787543 0.135927501035668 0.129493193844371 0.139528807547457 0.135724649051295 0.134857014604563 0.14143867268809 0.137269836334207 0.140231239388517 5 5 + 9440826 9441544 9441170.182 9437300 9441782 + gene protein_coding_gene TRUE TRUE AT5G26830.1 threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) Identical to Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) (THRRS) [Arabidopsis Thaliana] (GB:O04630;GB:O81907;GB:Q84TG4;GB:Q94AG0); similar to threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative [Arabidopsis thaliana] (TAIR:AT2G04842.1); similar to threonyl-tRNA synthetase [Dictyostelium discoideum AX4] (GB:XP_636821.1); similar to threonyl-tRNA synthetase [Aedes aegypti] (GB:EAT47704.1); similar to threonyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:CAC79651.1); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain TGS; (InterPro:IPR004095); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain Threonyl/alanyl tRNA synthetase, SAD; (InterPro:IPR012947); contains InterPro domain Threonyl-tRNA synthetase, class IIa; (InterPro:IPR002320); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain TGS-like; (InterPro:IPR012676); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195) 1.24127202227480 13.8917195064948 3.93842244337425e-08 5.49064102845425e-06 16.9013584172314 15.274861309045 1.24127202227480 0.0668418404207229 AT5G05600_at 3.98202170283185 4.75079496223571 6.06167854001501 6.49833804568962 4.48071771379 4.76601878086797 2.15815778241874 1.89992070124375 1.91286425304883 2.85007220354996 2.84902811452352 2.78577297147117 3.00729474290306 2.92514631723633 2.64838902732506 6.14034946950532 2.97537030413410 3.56639991218318 1.30315731843318 0.271374581038855 0.275630267862639 0.276688198878164 0.270278784788411 0.265123133527251 0.271160380067095 0.267442995824463 0.281718164394799 0.269190791484838 0.265387886011015 0.263695343702484 0.262198908155442 0.262198908155442 0.268192011661232 0.262739201607147 0.277811416313298 0.266046641107488 0.265123159587070 0.268147953121993 5 0|5 /|+ 1673303 1674576 1673916.6 1672121 1674740 + gene protein_coding_gene TRUE TRUE AT5G05600.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G11180.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE94015.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.79707604098718 13.8559202942217 4.04213165678998e-08 5.61716269899568e-06 16.8803298205304 7.01683108651368 1.79707604098718 0.166866961247235 AT5G52210_at 6.36692490903329 6.41762526165425 7.55963099578783 7.52856132675062 7.7570305826755 7.68989659798353 5.94407437664896 5.38118592409206 5.91119996874885 4.74693477573001 6.65883919031635 6.57236703514387 6.14881658422627 6.4774727774639 6.57130014079198 5.89337186818435 6.57751428898542 6.52479725703651 5.15850686939235 0.222019312495574 0.215645646753779 0.218070314720374 0.217165889507673 0.211676072981876 0.211633131201186 0.222746909850933 0.221472018844800 0.221320831017239 0.222401341166292 0.216815615112535 0.216165508524876 0.220266359546499 0.21633722173679 0.219037458084779 0.221561824846583 0.218129453963315 0.213013242746919 0.232091461306887 5 5|0 +|/ 21223016 21224041 21223586.4 21222217 21224324 + gene protein_coding_gene TRUE TRUE AT5G52210.1|AT5G52210.2 ATGB1 (Arabidopsis thaliana GTP-binding protein 1); GTP binding|ATGB1 (Arabidopsis thaliana GTP-binding protein 1) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. similar to ATARFA1E (ADP-ribosylation factor A1E), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT3G62290.1); similar to ARF1A1c (ADP-RIBOSYLATION FACTOR 1), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT2G47170.1); similar to ATARFA1B (ADP-ribosylation factor A1B), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT5G14670.1); similar to Os07g0620400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060300.1); similar to GTP-binding protein [Oryza sativa] (GB:AAC05675.1); similar to Os03g0392300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050283.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 1.38108663971020 13.8293993362627 4.12088051994584e-08 5.7083005030963e-06 16.8647027880166 12.6807531288577 1.38108663971020 0.098639068337335 AT5G06570_at 5.21802312674237 5.54183642143914 5.22669524653723 5.19814808697649 7.12688630949018 6.27143183402941 2.10820680099730 1.68411198893776 2.62122276325079 1.93552120855643 2.89532983708062 3.59243396091456 2.713549691401 2.89845811949417 2.76546869941764 4.83131111007026 3.83046984915165 2.82320203552543 1.20715756933411 0.282514956543052 0.293104979002481 0.275552365702403 0.289969846002845 0.289729277727590 0.282724804536589 0.272948408541275 0.270038863447174 0.275730792541597 0.273333844663266 0.274404096049806 0.270038863447174 0.270038863447174 0.270038863447174 0.274750299368063 0.272740093258403 0.271885446424051 0.270571372665757 0.278235023224409 5 5 - 2008108 2010599 2009652.273 2007601 2011042 - gene protein_coding_gene TRUE TRUE AT5G06570.1|AT5G06570.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16080.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89016.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.84511159194866 13.8247511598431 4.13485379148832e-08 5.70941552728367e-06 16.8619596627968 7.40445669019158 1.84511159194866 0.174547635066788 AT5G58980_at 6.34768645041122 5.78962093756304 8.04559312338871 7.77883282195006 8.06603652592186 7.76019966121337 6.36416578344532 6.33964101083564 6.20253192424528 6.88202451589881 8.12649073270574 7.86731313528226 7.5349771904422 7.9572824703358 7.4164412133531 8.23143857485286 8.19612766320872 7.56906156997082 6.64690916992004 0.209537420472043 0.202437557727938 0.209391083300334 0.199843549623928 0.209744361902121 0.205156648852520 0.203574891331913 0.216736566512679 0.211396361244699 0.209074196046948 0.205161880509996 0.203486196133220 0.211747190360436 0.207056177691417 0.206248532039230 0.208152470776822 0.215340604179968 0.205676413917612 0.212152120016332 5 5 - 23828680 23829199 23828873.545 23828675 23831621 - gene protein_coding_gene TRUE TRUE AT5G58980.1 ceramidase family protein similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT1G07380.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.1); similar to Os01g0624000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043618.1); similar to Neutral/alkaline nonlysosomal ceramidase [Medicago truncatula] (GB:ABE89511.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase; (InterPro:IPR006823) 1.49381167648446 13.8147885291434 4.16497754058251e-08 5.73275329251156e-06 16.8560759158591 14.2812454254030 1.49381167648446 0.119487425402029 AT5G65670_at 10.0020337211104 10.0734277530055 11.1118159067824 11.0597298624035 11.0353011352620 10.9614622090172 9.78161983217288 9.83606246414396 9.8666903954128 9.74372349690468 10.9991403556807 10.905625773575 10.9628050637338 10.9141169253750 11.0624862463026 10.7607679013707 10.8985741422790 10.9371431910111 9.86911268167564 0.0877056213458182 0.089559189804848 0.0859444914475545 0.0861417611183958 0.0826302663517132 0.0888548830688616 0.0850981780475609 0.0886751410459311 0.0913765398473627 0.08490217076058 0.0831191266226372 0.08320549610552 0.0831379215817264 0.0826302663517132 0.085508501595926 0.0826302663517132 0.0882771098541294 0.0860482290930914 0.0844138402958148 5 5|0 +|/ 26272115 26272496 26272327.875 26270884 26273694 + gene protein_coding_gene TRUE TRUE AT5G65670.1|AT5G65670.2 IAA9 (indoleacetic acid-induced protein 9); transcription factor auxin (indole-3-acetic acid) induced gene Identical to Auxin-responsive protein IAA9 (Indoleacetic acid-induced protein 9) (IAA9) [Arabidopsis Thaliana] (GB:Q38827;GB:Q8LBP2;GB:Q9FLH4); similar to IAA8 (indoleacetic acid-induced protein 8) [Arabidopsis thaliana] (TAIR:AT2G22670.3); similar to GH1 protein [Glycine max] (GB:AAB70005.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 1.11118246383818 13.8051520522964 4.19434277416387e-08 5.74199175797158e-06 16.8503792149181 20.8609772644441 1.11118246383818 0.0220441015508751 AT5G40730_at 5.92463192169328 6.2062195326398 7.22499002106407 7.13412979140797 8.2289282393122 7.76475392379551 5.45076925969004 5.67699133291303 6.10122188412832 5.46481722074678 6.78040463724182 6.0940985292262 6.78684675066912 6.86946646401887 6.11523849523766 6.87878585053131 6.70526628928845 6.86349417651259 5.25705518633214 0.206672527722633 0.206494870496001 0.214725384721207 0.212935189845793 0.209184583096122 0.203892260774623 0.206833713343336 0.208618252751736 0.206178517418198 0.207356295497450 0.202231252961927 0.216628156861790 0.210208522319115 0.215125578483509 0.205342922054191 0.202928090888247 0.220399359182516 0.207567570520244 0.204956952126546 5 5 + 16318395 16318565 16318466.455 16318303 16318748 + gene protein_coding_gene TRUE TRUE AT5G40730.1 AGP24 (ARABINOGALACTAN PROTEIN 24) Encodes an arabinogalactan-protein (AGP24). Identical to Arabinogalactan peptide 24 precursor (AG-peptide 24) (AGP24) [Arabidopsis Thaliana] (GB:Q5PP12;GB:Q8LE23) 1.40127476709129 13.8038994345721 4.19817641635449e-08 5.74199175797158e-06 16.8496383143239 12.8236258758944 1.40127476709129 0.102990264685297 AT5G55200_at 5.47594709207323 5.75098135085396 7.32212515263461 7.62203146846982 6.4268720856827 6.64233389599617 6.14620311386786 6.40380646853202 4.72841874126222 5.23361745282928 6.44858392532444 6.7530973760037 6.54138351011979 6.5270779326543 6.62256106975423 6.82443676365337 7.0173638158132 6.58770854615379 5.17045429202181 0.166319966922794 0.157475280108215 0.160961970662236 0.159794591165235 0.160129628425861 0.167696939671683 0.160613036263488 0.165021596854836 0.180145266606812 0.166413435193337 0.163156558096837 0.160102824181218 0.160319628227622 0.164135520390715 0.167688511309779 0.158572681527108 0.176040833415988 0.161028221106896 0.172481490594078 5 5 + 22412645 22413537 22413184.818 22411833 22413798 + gene protein_coding_gene TRUE TRUE AT5G55200.1 co-chaperone grpE protein, putative similar to AR192, adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization [Arabidopsis thaliana] (TAIR:AT4G26780.1); similar to chaperone GrpE type 2 [Nicotiana tabacum] (GB:AAC72387.1); contains InterPro domain GrpE protein, head; (InterPro:IPR009012); contains InterPro domain GrpE protein; (InterPro:IPR000740) 1.34010963321378 13.7880479365084 4.24702131078617e-08 5.78642888934377e-06 16.8402544235274 12.3285076349166 1.34010963321378 0.0913051431686607 AT5G03080_at 6.9141715474272 7.08038775573128 7.99379281847734 7.98633884520697 7.9308142372418 7.80519775166502 6.84300532197318 7.23096714838264 6.80646579563946 6.35498209396254 8.14283490196685 7.9775021886082 8.280410724702 8.01358003731935 8.07614189117404 7.90558843695148 7.96570589948014 7.91423752968343 6.0601420285697 0.152268286432732 0.145567638818553 0.147090293626513 0.144410460014805 0.14033250257924 0.149819770089096 0.148855869943162 0.148752288553168 0.156381269319138 0.165018071131557 0.145155043284825 0.14033250257924 0.145257035377719 0.144234490520881 0.143583424413435 0.143056591808322 0.149762966564454 0.14033250257924 0.166775401417564 5 5 + 722084 722566 722293.909 721866 723399 + gene protein_coding_gene TRUE TRUE AT5G03080.1 phosphatidic acid phosphatase-related / PAP2-related similar to PREDICTED: similar to Dolichyldiphosphatase 1 (Dolichyl pyrophosphate phosphatase 1) (Protein 2-23) [Rattus norve (GB:XP_231129.3); similar to Os03g0288700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049787.1); contains InterPro domain Phosphoesterase, PA-phosphatase related; (InterPro:IPR000326); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase; (InterPro:IPR008934) 1.26960326580716 13.7779766165254 4.27837666307573e-08 5.78642888934377e-06 16.8342845971191 14.6939328485763 1.26960326580716 0.0762182072198011 AT5G18490_at 7.06497026398192 7.55525774853673 8.47995555670001 8.70870816645018 8.62611133756464 8.32438820966685 5.25538117054861 5.21769163255397 6.3484757569004 5.4305438469758 5.97233951149206 6.23116159775561 6.42306252671736 6.30307975692261 5.23539212163001 6.9573595516702 6.72674093044912 6.51187077297527 5.36037975430127 0.271906393250849 0.268547710365726 0.273104187592679 0.280476157062773 0.268547710365726 0.283511081918526 0.268547710365726 0.271407080817711 0.279269645494642 0.273112899029833 0.277735036632609 0.269729117506335 0.276932470994056 0.275620649097364 0.277528754861175 0.268547710365726 0.282935513235059 0.269935499501145 0.268547710365726 5 5 - 6134340 6134828 6134625.455 6134154 6136767 - gene protein_coding_gene TRUE TRUE AT5G18490.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04090.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04350.1); similar to Protein of unknown function DUF946, plant [Medicago truncatula] (GB:ABE91890.1); similar to Protein of unknown function DUF946, plant [Medicago truncatula] (GB:ABE90426.1); contains InterPro domain Protein of unknown function DUF946, plant; (InterPro:IPR009291) 1.42172917024958 13.7729242845529 4.29420118670071e-08 5.78642888934377e-06 16.8312875364145 13.4081874935474 1.42172917024958 0.107400869911256 AT5G13560_at 5.71689197871885 6.22578378463488 7.02538390915549 6.85669179009884 6.75551838674892 7.28135166118976 5.04902586000312 5.15798135886417 5.2494214086975 5.27472889613409 7.09473917941444 7.19900626823072 7.01735754699899 6.72825564589995 6.82875178429751 7.25181083194904 7.22460126849657 6.10219036949094 5.24273066355679 0.193151484918074 0.189952207129385 0.19023568731534 0.190687118234783 0.187655667078621 0.189594309220718 0.191833219981163 0.194544408983161 0.218250149617460 0.194258334688737 0.192257882268153 0.189194161353300 0.200397250064873 0.194066236702519 0.188398067640865 0.193672972460020 0.19197509079064 0.195628818118577 0.197304128201151 5 0|5 /|- 4361628 4362063 4361805.222 4360634 4366451 - gene protein_coding_gene TRUE TRUE AT5G13560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37370.1); similar to Os03g0281300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049742.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07652.1) 1.55876390681374 13.7701573013866 4.30289473928244e-08 5.78642888934377e-06 16.8296455106329 12.3518116418318 1.55876390681374 0.131316432548778 AT5G03460_at 9.06739669154326 8.96888960221696 9.66427806253656 9.56162449648085 9.90218537410895 9.53827927922734 7.68586767302116 7.76690866139975 7.65239447532591 8.02594635326209 9.19521038612104 8.9618989705747 9.04634132796275 9.00748859111556 9.17853543321 8.8421541992137 9.21664138804152 8.88801283140464 7.89689758932694 0.139052465940207 0.134237735716102 0.139167018716259 0.136495134453822 0.139893732010639 0.136677779857434 0.127990331379422 0.13873696065809 0.155039983262749 0.135288589424512 0.126961514651947 0.123050861063803 0.130021546157770 0.130857437926516 0.130114424277677 0.123050861063803 0.128364902233217 0.123050861063803 0.140582908205671 5 5|0 +|/ 864505 865481 865094.444 864280 865677 + gene protein_coding_gene TRUE TRUE AT5G03460.1 similar to Os02g0823600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048570.1); similar to F12E4.230-like protein [Hyacinthus orientalis] (GB:AAS20978.1) 1.23897436551349 13.7682459938696 4.30891105315001e-08 5.78642888934377e-06 16.8285110077098 17.4696528285304 1.23897436551349 0.0690565499520188 AT5G56140_at 8.3681734199983 8.1447635440839 9.1527600805165 9.18803699094713 9.41396360447073 9.5239705740878 8.20997108366907 8.19398691089788 8.23624318155406 8.07205830431923 9.74004725171581 9.0738874363006 9.71316267693748 9.58359496383015 9.09282023395761 9.29321406115821 9.19698559961864 9.0037622221165 8.05637241424604 0.150955984409408 0.143478070508772 0.147307445700465 0.144348209530422 0.145396634637185 0.155221256522556 0.140880544637112 0.149779280023940 0.164443707169283 0.152651492055332 0.139988481346465 0.144755018862080 0.140842175303434 0.147218881765134 0.141272498266261 0.144227681049115 0.143542604855300 0.156020710351149 0.163063068873955 5 5|0 +|/ 22743950 22745102 22744661 22742595 22745569 + gene protein_coding_gene TRUE TRUE AT5G56140.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G26480.1); similar to putative KH domain protein [Oryza sativa (japonica cultivar-group)] (GB:BAD13019.1); contains InterPro domain KH; (InterPro:IPR004087) 1.15304270592059 13.7676649984756 4.31074169634899e-08 5.78642888934377e-06 16.8281661008222 17.5038244122893 1.15304270592059 0.0436130234397328 AT5G51960_at 6.8849080234983 7.06087634635291 8.29595713815462 7.99603436197522 8.29069268130037 7.86194417854867 6.09487221249724 6.59400565103486 5.92440396753826 5.35062572102829 7.2840038517378 7.93799957924844 7.41235454529169 6.77510405930505 8.16966707563423 7.31419500121412 6.7825407835182 7.21607378937753 5.91003442506150 0.187186836460606 0.177105350663722 0.176672997643256 0.186630050329815 0.176411896755885 0.180420515533389 0.181451852784494 0.184280558270879 0.186255561959874 0.189419969364382 0.177310121324637 0.173529552461013 0.180915841617659 0.175358556696690 0.176941535688506 0.176741110410246 0.176893759820250 0.182030504906387 0.186445435656702 5 5|0 +|/ 21127946 21128311 21128122 21127929 21128574 + gene protein_coding_gene TRUE TRUE AT5G51960.1 similar to At5g51960 [Medicago truncatula] (GB:ABE81134.1) 1.54281458138604 13.7631997943838 4.32483931046062e-08 5.78743475556096e-06 16.8255146712674 13.9298348442746 1.54281458138604 0.128792437277696 AT5G27320_at 6.28247797371809 6.92669416333822 7.4242608242428 8.06019359670365 8.86678271047496 7.96550648986689 5.4714876065599 5.46998787299138 4.26111619158433 5.1593451148304 6.90692128087511 6.7474935376209 7.6243051100731 7.28446915017108 6.07934323312267 7.61138305135791 7.47843834291233 7.28108808584998 5.09921183908946 0.261940113726374 0.261613685593216 0.265876480538608 0.268756230986507 0.277902840843935 0.275026218537688 0.270205760422246 0.262365235133047 0.277829694451160 0.269036376794126 0.283773795518103 0.261613685593216 0.264380987061176 0.273328210555978 0.279433764821081 0.261613685593216 0.276055872851458 0.263373238444491 0.266063452706511 5 5 + 9630215 9630679 9630435.545 9629095 9631213 + gene protein_coding_gene TRUE TRUE AT5G27320.1 ATGID1C/GID1C (GA INSENSITIVE DWARF1C) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. Identical to Probable gibberellin receptor GID1L3 (EC 3.-.-.-) (GID1-like protein 3) (GID1L3) [Arabidopsis Thaliana] (GB:Q940G6); similar to ATGID1A/GID1A (GA INSENSITIVE DWARF1A) [Arabidopsis thaliana] (TAIR:AT3G05120.1); similar to (GB:ABG89394.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 2.16415658833334 13.7510985595192 4.36329873108635e-08 5.82093472443829e-06 16.8183230245695 13.0417095409866 2.16415658833334 0.221058354784944 AT5G39410_at 5.95065661680347 6.50580431675621 5.20087878872524 5.48620635336859 7.09914816943183 6.08106952255432 2.57986839815592 2.71487816925027 2.66119888011694 3.10285707564913 5.20114472356662 6.00044860689061 4.69872457201387 5.76298027305325 6.25739212328598 4.66900149360835 4.23408409227945 5.68099339067157 2.3499632748041 0.273007246555612 0.26644623294945 0.275054530108135 0.262226570143431 0.262226570143431 0.284793364552655 0.26722946783213 0.271742632794309 0.276473464528733 0.271251244811239 0.267503439571421 0.263343594420594 0.265048898661748 0.262226570143431 0.270158442768418 0.265425522831543 0.265919508882075 0.275945171940986 0.278964223067888 5 5 - 15785698 15786186 15785952.455 15785421 15787638 - gene protein_coding_gene TRUE TRUE AT5G39410.1 Identical to Probable mitochondrial saccharopine dehydrogenase At5g39410 (EC 1.5.1.9) (SDH) [Arabidopsis Thaliana] (GB:Q8LGI2;GB:Q9ZR98); similar to MGC84136 protein [Xenopus laevis] (GB:AAH74314.1); similar to MGC82870 protein [Xenopus laevis] (GB:AAH73574.1); similar to Os07g0597100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060175.1); contains InterPro domain Saccharopine dehydrogenase; (InterPro:IPR005097) 2.06872345792151 13.7467017679429 4.377364523673e-08 5.82178625173818e-06 16.8157078966669 9.2111984100197 2.06872345792151 0.207976325841294 AT5G53160_at 9.25174850520695 9.4638338341747 10.1674407475965 10.3495547628774 10.3528894653555 10.237486725691 8.62782881879998 8.77278535798128 8.90886832827256 9.0357454283001 10.0675998807439 9.5008373703379 10.1317717108597 10.1070333259719 9.61645024026527 10.3433092969032 10.2499132282746 10.2907163034024 8.74631524863588 0.154766323668011 0.138472988209386 0.144803548363137 0.141198271149585 0.147717311882475 0.150436317167414 0.151301669393311 0.144036270464229 0.154540299908156 0.146630167692599 0.145116627552997 0.144713427071019 0.139221612808443 0.147890915901179 0.142210415318224 0.147435188355697 0.159848070369034 0.142076496407533 0.151056757731378 5 5|0 +|/ 21578270 21579144 21578688.9 21577944 21579486 + gene protein_coding_gene TRUE TRUE AT5G53160.1|AT5G53160.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27920.1); similar to CAPIP1-like [Solanum tuberosum] (GB:ABB29920.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01360.1); similar to CAPIP1 [Capsicum annuum] (GB:AAT35532.1); similar to CAPIP1-like [Solanum tuberosum] (GB:ABB29920.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) 1.19463569043236 13.7319869918968 4.42479918413796e-08 5.86687661966278e-06 16.8069474539549 19.1206611545426 1.19463569043236 0.0580380792031139 AT5G62620_at 5.08625951880831 5.26535114753142 7.18135950478628 6.87517316805154 6.09808672369518 5.97953364232956 3.17305062253736 2.90687076871942 3.59436882160402 3.73858949298247 3.58749254603523 3.58771304867763 3.752273435446 3.74458170525511 3.70841847042311 4.14638987196046 3.68520284541371 3.72209229650567 3.50290537602853 0.24518411104694 0.237721344121871 0.25225563238731 0.247352215833941 0.237206059822350 0.239946221284261 0.243997702175452 0.233420215155222 0.237413074830431 0.241103819824094 0.232702835527950 0.232702835527950 0.232702835527950 0.249172830654520 0.237857878241137 0.235335668861027 0.239226998949061 0.240347586687984 0.237412609566441 5 5|0 +|/ 25156140 25156961 25156642.9 25153977 25157148 + gene protein_coding_gene TRUE TRUE AT5G62620.1 galactosyltransferase family protein similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G21060.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G74800.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G27120.1); similar to galactosyltransferase family-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83183.1); similar to galactosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99414.1); similar to Glycosyl transferase, family 31; Ar (GB:ABE93312.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Galectin, galactose-binding lectin; (InterPro:IPR001079); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) 1.27773560462140 13.7139080414759 4.48384695626211e-08 5.92704301905804e-06 16.7961664683531 8.99757318255886 1.27773560462140 0.0794414086954363 AT5G07920_at 5.30119064819865 5.65825028001717 7.22078333670901 7.35596767000292 7.70517296688999 7.27244496059081 5.58986132545775 5.91723534957029 5.98568324360799 5.7630697067811 7.02171669054278 7.08195636696617 7.27769129084394 7.13228575851972 6.22281385685557 7.42322688131839 6.51785366572908 7.15129633857247 5.77510865503043 0.231106270794295 0.231533933200280 0.240550464812558 0.227840355631560 0.23388939532597 0.24038070642073 0.228465025074213 0.238398519679235 0.238937537358620 0.235679931917250 0.228360731385316 0.226040830026006 0.225932227986346 0.242287993860990 0.230884880451757 0.225641208810529 0.245071760179916 0.233575468026968 0.229921562015471 5 5|0 -|/ 2525292 2526094 2525664 2524779 2529331 - gene protein_coding_gene TRUE TRUE AT5G07920.1 DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1); diacylglycerol kinase diacylglycerol kinase Identical to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1) (DGK1) [Arabidopsis Thaliana] (GB:Q39017;GB:Q9SD92); similar to ATDGK2 (DIACYLGLYCEROL KINASE 2), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G63770.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99054.2); similar to putative diacylglycerol kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07206.1); similar to Diacylglycerol kinase 1, putative [Oryza sativa (japonica cultivar-group)] (GB:ABF96709.1); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219) 1.45463786854961 13.697012885355 4.53980513577277e-08 5.98277205254446e-06 16.7860737540590 12.9125594711671 1.45463786854961 0.114816737276994 AT5G36250_at 6.73072813432327 6.70654279406859 7.92139897285015 7.60635361274763 8.53428492959735 8.36859993251236 6.92971714412172 7.27285140104814 6.80603788231031 6.60416969102012 8.35598444096915 8.07559118704424 8.32711956105009 8.24555240367425 7.61122421449698 8.35554921962024 7.85168085208004 7.61070983607727 6.52565534190079 0.232274939931617 0.215496432393814 0.212651238635761 0.214938901985413 0.214076819888425 0.212651238635761 0.219216745556424 0.223604122386161 0.235402980484345 0.237839671914327 0.212655406258543 0.215871383958373 0.218886070606074 0.225128224816979 0.226011072485352 0.212651238635761 0.215491530340057 0.234183112112799 0.232281287834544 5 5 + 14300909 14301572 14301227.818 14299333 14301811 + gene protein_coding_gene TRUE TRUE AT5G36250.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT3G02750.2); similar to protein phosphatase 2c [Medicago sativa] (GB:AAV73837.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.30329415975128 13.6854654180691 4.57848892494964e-08 5.99813173466729e-06 16.7791657719513 14.8585416665521 1.30329415975128 0.0856631329415654 AT5G06950_at 4.35119775886736 4.48380797775746 5.46346037719131 5.6977205245344 6.40130138393885 5.96962326711611 4.39728323971039 4.0154700419613 3.20723304733242 3.53507373582855 4.89454773038553 4.21002720156398 4.49737818434468 4.38254745178997 4.77642757487214 5.04701815047031 5.35038934892047 4.34430614741940 3.47213429767293 0.222583274441696 0.231360298258715 0.235156730539295 0.22867682655087 0.222583274441696 0.227608868688388 0.228771594028701 0.233354980151897 0.242824285279934 0.231270241373366 0.226640261854238 0.229272431258781 0.222583274441696 0.234678687004351 0.222583274441696 0.22736499314916 0.225132250228364 0.222583274441696 0.222583274441696 5 5|0 +|/ 2153390 2154137 2153788.1 2151026 2154554 + gene protein_coding_gene TRUE TRUE AT5G06950.1|AT5G06950.2|AT5G06950.3|AT5G06950.4 AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor|AHBP-1B (bZIP transcription factor HBP-1b homolog) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment. Identical to Transcription factor TGA2 (HBP-1b homolog) (AHBP-1b) (AtbZIP20) (TGA2) [Arabidopsis Thaliana] (GB:P43273); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to leucine zipper (GB:AAC37470.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 1.42705158186527 13.6840045298003 4.58340841132769e-08 5.99813173466729e-06 16.7782912625508 9.1438050300507 1.42705158186527 0.11007563586933 AT5G12840_at 6.15328153148327 5.98921906459054 7.35111521041302 7.44251690846988 7.79306725473861 7.48302703669281 6.33437379564695 6.44866288446593 5.34567772197519 5.58104816659506 6.63530864277288 6.60980059758412 7.06934041896841 6.7452209882065 6.23253108042258 6.87484594369822 7.17120161407703 6.48974032864712 5.80679302483176 0.185099269607444 0.188685462015064 0.194650811535742 0.19336481904184 0.198338078353758 0.204649598167092 0.184325022754873 0.188178040805078 0.200296123301503 0.207597299877887 0.186801698940033 0.186797036178473 0.189564868214946 0.190594796160152 0.187126391575897 0.184932754049303 0.189526943612198 0.183487946099463 0.195109770906930 5 5|0 -|/ 4051155 4052695 4051874.333 4050694 4053605 - gene protein_coding_gene TRUE TRUE AT5G12840.1|AT5G12840.2|AT5G12840.3|AT5G12840.4 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Identical to Nuclear transcription factor Y subunit A-1 (AtNF-YA-1) (Transcriptional activator HAP2A) (NFYA1) [Arabidopsis Thaliana] (GB:Q9LXV5;GB:O23630); similar to CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis thaliana] (TAIR:AT3G20910.1); similar to CCAAT-box binding factor HAP2 homolog [Daucus carota] (GB:BAD15086.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) 1.21835317376417 13.6811720972091 4.59296293921573e-08 5.99813173466729e-06 16.7765953615676 13.0275771306115 1.21835317376417 0.0657739085355994 AT5G36220_at 8.74749087479932 8.48684746726873 9.03254111158317 8.78765167575647 9.04660988567173 8.555134614946 6.77555465028416 6.04089900314472 5.49614011103431 6.56658914278366 7.6544540919212 7.53098748316521 7.66875882617602 7.89254989856034 6.64556034639612 8.77392583545427 8.53492483779403 8.49379850060378 5.10400738229967 0.214451910994192 0.201105858009888 0.207737556961753 0.2062141754181 0.201105858009888 0.211660165196881 0.206256835056636 0.219226191988508 0.240886391252052 0.213153588381818 0.207620350774707 0.209410082928058 0.2074255883847 0.221234240053181 0.217673486857617 0.201105858009888 0.213160725552619 0.201105858009888 0.228536643155578 5 5 - 14271075 14271620 14271356.545 14270920 14273263 - gene protein_coding_gene TRUE TRUE AT5G36220.1 CYP81D1 (CYTOCHROME P450 91A1); oxygen binding member of CYP81D Identical to Cytochrome P450 81D1 (EC 1.14.-.-) (CYP81D1) [Arabidopsis Thaliana] (GB:Q9FG65;GB:O65789); similar to CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37370.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 1.75995537762572 13.6647432865598 4.64881134892106e-08 6.05283494847133e-06 16.7667492150370 14.9948989218725 1.75995537762572 0.165008568730243 AT5G04720_at 9.29251232550605 9.47959373048305 10.5451680057651 10.5638740578689 10.2113188095410 10.1748916435342 8.55973239539909 8.75229050745815 8.08788464965327 7.75680974890444 8.87410950552862 8.35333054575351 8.7445263666953 8.37630212064515 8.22745250862591 8.82966008012178 8.78944897274585 8.69464331190828 7.13165536954066 0.196834891701477 0.192941566609043 0.195983298537659 0.196500634139298 0.195496989933952 0.197399925602025 0.185798513150876 0.188521253211922 0.211531632919982 0.198515479001052 0.186740293181508 0.185798513150876 0.194515024023243 0.198710341365368 0.193375810804461 0.185798513150876 0.206536438777147 0.197758707115119 0.212147718854582 5 5 + 1363071 1363638 1363347.455 1360713 1363885 + gene protein_coding_gene TRUE TRUE AT5G04720.1 ADR1-L2 (ADR1-LIKE 2); ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding Identical to Probable disease resistance protein At5g04720 [Arabidopsis Thaliana] (GB:Q9LZ25); similar to ADR1 (ACTIVATED DISEASE RESISTANCE 1) [Arabidopsis thaliana] (TAIR:AT1G33560.1); similar to ADR1-L1 (ADR1-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT4G33300.2); similar to ADR1-L3 (ADR1-LIKE 3), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT5G47280.1); similar to Probable disease resistance protein At4g33300 (GB:Q9SZA7); similar to Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABE81238.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 1.152590904968 13.6499097866145 4.69987269954267e-08 6.10099642335162e-06 16.7578452306402 17.8324064007124 1.152590904968 0.0469979425051045 AT5G23670_at 7.20188090747702 7.28020620514669 7.99266297017803 8.17611188692431 8.65958339501236 8.59798614849656 7.05513320019391 7.07511579534195 7.00044190710418 6.6569247067282 7.79005809852941 8.10399056243563 8.00654225068581 7.58030765591678 8.11140766634887 8.02804139110959 8.20326726883627 8.1653901448526 7.20533211933402 0.179697634279333 0.17101271411847 0.176380940707162 0.168525613409114 0.169140059302067 0.175952796593694 0.169680680776673 0.180202357882034 0.2025659629263 0.183021949893224 0.181401834103954 0.171429610247767 0.168525613409114 0.174733746647381 0.168525613409114 0.169816208422525 0.171722448817623 0.173194103856484 0.181731807358919 5 5|0 +|/ 7983789 7984975 7984464.4 7981644 7985401 + gene protein_coding_gene TRUE TRUE AT5G23670.1|AT5G23670.2 LCB2 (Serine palmitoyltransferase LCB2 (long chain base) subunit gene); serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. similar to serine C-palmitoyltransferase, putative [Arabidopsis thaliana] (TAIR:AT3G48780.1); similar to serine palmitpoyltransferase subunit2 [Nicotiana tabacum] (GB:BAE96963.1); similar to serine palmitoyltransferase [Lotus japonicus] (GB:BAC55228.1); similar to serine palmitoyltransferase [Solanum tuberosum] (GB:CAB44316.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 1.12394739594842 13.6369411026753 4.74501571684676e-08 6.14121059656524e-06 16.7500497637984 15.2312643340438 1.12394739594842 0.0362927781093842 AT5G63870_at 5.49399702611061 5.40728521639875 6.74210263181164 6.80666605898105 7.16497520498112 7.00917949951124 6.018501906904 5.46115384958017 4.73715753048748 4.79921165878318 6.10044333305327 6.06203931822803 6.02065625400283 6.0640416867155 5.75131692709618 6.19269140615357 6.7190913508226 6.05089601751081 4.56542137378606 0.220157118300191 0.221311588929571 0.219403105207994 0.216822973387774 0.212925470822563 0.223036015731072 0.212771629010708 0.218274136889286 0.225257804227288 0.240009817280036 0.2093018201981 0.218516282370606 0.216040769461671 0.214333781107810 0.221927456305097 0.216168154503983 0.217335589164656 0.225322917803298 0.231200964462376 5 5 - 25579192 25579779 25579459.364 25578386 25580500 - gene protein_coding_gene TRUE TRUE AT5G63870.1|AT5G63870.2|AT5G63870.3 PP7 (protein phosphatase 7); protein serine/threonine phosphatase Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G48120.1); similar to Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase [Medicago truncatula] (GB:ABE88824.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 1.37752326570924 13.6268204181445 4.78057329565233e-08 6.16881642076127e-06 16.7439591776829 11.6733546198099 1.37752326570924 0.101881519839224 AT5G57340_at 9.03921294239083 9.09014483899842 10.2446699450238 10.2491747700958 10.8919180786391 10.5885165720520 9.36169963298624 9.46560701374789 9.09404362514534 9.47757333377005 10.4792271468224 9.92812950012734 10.5791947262553 10.6733227768357 9.99983499757056 10.6464131515266 10.7654834985165 10.8081218114517 9.57780029193562 0.0920485344947137 0.0919992177948235 0.0914666085710648 0.0886023775177805 0.0903173621287223 0.0906385489195619 0.0938286011846647 0.0911006047286908 0.102064606735440 0.0895844894135587 0.0900057851114708 0.0905723431240605 0.0900299089501647 0.0884950576359011 0.0884950576359011 0.0886345412885761 0.0918309952819164 0.0908905429418635 0.090595295258174 5 5 + 23245934 23246296 23246124.818 23243312 23246508 + gene protein_coding_gene TRUE TRUE AT5G57340.1|AT5G57340.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67390.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83997.1) 1.17811530097155 13.6136799604197 4.82717428871060e-08 6.21046646636525e-06 16.7360420694439 19.8004204916194 1.17811530097155 0.0561997703844512 AT5G38220_at 7.59328162737954 7.77488624557254 8.65058247030718 8.65060152114369 9.4211770788325 8.83066352709935 7.84303569511249 8.1077336917 6.17270063395634 6.51981287743973 8.21492622763407 8.6327630938553 8.21693202843374 8.07493172620017 8.12623830589922 8.49641768144213 8.05964953083394 7.8711102265063 6.39719901433223 0.190844549206762 0.168318072613558 0.174132873588643 0.175157857644267 0.177633523439197 0.182429753894049 0.173243478441181 0.168318072613558 0.189639242753345 0.178556406849279 0.172776202860050 0.168318072613558 0.170551541379406 0.175907880864007 0.173292512867372 0.170933456434955 0.177335676822723 0.170789549833271 0.184037252327486 5 5 + 15287411 15288237 15287884.091 15286057 15288616 + gene protein_coding_gene TRUE TRUE AT5G38220.1|AT5G38220.2|AT5G38220.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66900.1); similar to Os01g0689800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043924.1); similar to C (GB:BAD82560.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Phospholipase/Carboxylesterase; (InterPro:IPR003140)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66900.1); similar to Os01g0689800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043924.1); similar to C (GB:BAD82560.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 1.45345271421452 13.6071473366289 4.85052542934637e-08 6.2220461476983e-06 16.7321022846145 15.6464245377318 1.45345271421452 0.116314302351855 AT5G60680_at 10.0086388964692 10.2122569306341 11.2093844381770 11.3963383149337 11.7065346651886 11.5460348467612 10.4729267909832 10.6528686277620 9.98865262693078 9.68888638182428 11.3060571063236 10.9821826576884 11.3013773474704 11.2287990277161 10.9524227747875 11.0010954972760 11.1896732634184 10.7716785454778 9.77008116717603 0.0853917394607908 0.084004977074036 0.087179150356334 0.0852159077567334 0.0837542179619257 0.088916139461085 0.0833887677779874 0.0836773338003436 0.0941303394138074 0.0928390769848431 0.0826018688192628 0.0826018688192628 0.0853172194980831 0.0927104237171218 0.0847783775193815 0.0826018688192628 0.0845885080577057 0.084160657038481 0.0886840421872452 5 5 + 24403485 24403865 24403658.182 24403371 24404202 + gene protein_coding_gene TRUE TRUE AT5G60680.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45210.1); similar to Protein of unknown function DUF584 [Medicago truncatula] (GB:ABE80969.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 1.20184382017288 13.5922399575202 4.90427471531231e-08 6.26498688607323e-06 16.7231020545185 21.3543900236120 1.20184382017288 0.0634785907645809 AT5G47520_at 5.67681812617033 5.79765366437449 6.49512726377946 6.38013574991653 6.72135522835097 6.82305998208627 5.48885813208997 5.72867597470883 5.76039671925767 5.43477784817637 7.01220988694826 7.68154249825568 7.10489364802745 6.9587543207391 7.46673604157796 6.66920428194102 6.61146651577084 6.79025345391496 5.70896143590671 0.207969249251147 0.218951543496365 0.223250865853007 0.207180521511190 0.218361535387437 0.213415881863079 0.214503998800774 0.206106365787052 0.207822537038204 0.209422668642635 0.213917492802609 0.203037762731806 0.203551464714247 0.202367001829939 0.215190113960863 0.202367001829939 0.213965127586868 0.215097170065705 0.202367001829939 5 5|0 -|/ 19294855 19295337 19295105.6 19294588 19296963 - gene protein_coding_gene TRUE TRUE AT5G47520.1 AtRABA5a (Arabidopsis Rab GTPase homolog A5a); GTP binding similar to AtRABA5d (Arabidopsis Rab GTPase homolog A5d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G31680.1); similar to Ras-related GTP-binding protein, putative [Brassica oleracea] (GB:ABD64936.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.16704433074036 13.5865916429842 4.92480922749514e-08 6.26498688607323e-06 16.7196884013109 12.4747578061899 1.16704433074036 0.0535297910734604 AT5G62280_at 8.39594151183442 8.73457282032994 8.09013981481613 8.22301738748637 9.4258269128299 8.90768382324172 6.21728490358599 6.14363704736903 9.69921062378545 7.61210675454486 10.4503012291204 11.0682986046523 10.8886643261124 9.9798068325399 11.0440963446767 10.7239664690046 9.81240477571563 9.6548183274946 9.40534595871352 0.166963153103532 0.165698787713221 0.179419835991508 0.182765316918506 0.163232029254762 0.168587065529361 0.182944843162630 0.209522657653697 0.175812552189934 0.205004321565432 0.16401137381431 0.165655059495621 0.163187928777781 0.165282184040225 0.165146440734739 0.166348695805432 0.168936417316651 0.163290403741253 0.164842053745208 5 5 + 25034654 25035175 25034886.818 25034299 25035472 + gene protein_coding_gene TRUE TRUE AT5G62280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45360.1); similar to Os02g0455400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046773.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19988.1); contains InterPro domain Protein of unknown function DUF1442; (InterPro:IPR009902) 1.41802404089848 13.5858945803059 4.92734989397646e-08 6.26498688607323e-06 16.7192669855798 17.6964375573596 1.41802404089848 0.110297592534885 AT5G54800_at 7.02895378801292 7.03712705846085 8.07340465673544 7.83936093105465 8.3128135439516 7.8689843101672 7.61902207727562 7.68217147862098 6.4084979110716 6.7166078348033 8.42041388182363 8.56937477829274 8.54499540706335 8.644570407665 7.85574944596406 8.51646283840925 7.85419953905403 8.27370699695844 6.11681580672371 0.214406934141611 0.203914257994140 0.206088284672002 0.201760752068628 0.203474500272982 0.211643642694470 0.210938869850416 0.200182153378928 0.215543698471117 0.207057413391058 0.20095198467551 0.207480300414823 0.199516496612628 0.214307833568644 0.199855685448645 0.199079951409482 0.242766593933126 0.200676001208885 0.212632739171088 5 5|0 +|/ 22279598 22280503 22280048 22278497 22281147 + gene protein_coding_gene TRUE TRUE AT5G54800.1 GPT1 (glucose-6-phosphate transporter 1); antiporter/ glucose-6-phosphate transporter glucose6-Phosphate/phosphate transporter 1 Identical to Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor (GPT1) [Arabidopsis Thaliana] (GB:Q9M5A9;GB:Q8LCH1;GB:Q9FFU8); similar to GPT2 (glucose-6-phosphate/phosphate translocator 2), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT1G61800.1); similar to glucose-6-phosphate/phosphate-translocator precursor [Pisum sativum] (GB:AAC08525.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696) 1.30139128546112 13.5744148648190 4.96939744661397e-08 6.2999741697613e-06 16.7123225704629 15.0571837369199 1.30139128546112 0.0875279462904638 AT5G42900_at 4.35730907573537 4.39127577864232 3.8846116990594 3.88623565970656 6.36754931839915 6.74290442251463 1.16509810962189 1.63239713212691 1.48160278469858 1.23413508878212 1.53848003296348 1.60456642389426 1.88140601675451 1.80379643443452 1.69459096560014 2.02882861648785 1.94914277145108 2.01189966156826 1.44482805544015 0.257621258113020 0.242176185101753 0.243132902228331 0.232524303218297 0.254047284042318 0.244590915291114 0.234281463718877 0.232555079680942 0.236941482042772 0.228753020736242 0.237535928161975 0.228592793365243 0.241350719705427 0.23257881638123 0.233004390160139 0.231379328621131 0.229858787834767 0.239818355290152 0.234466796758851 5 5|0 -|/ 17215623 17216381 17216069.3 17214869 17217021 - gene protein_coding_gene TRUE TRUE AT5G42900.1|AT5G42900.2|AT5G42900.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein MtrDRAFT_AC151424g24v1 [Medicago truncatula] (GB:ABE88920.1) 1.38051940332114 13.5530994906541 5.04851141908586e-08 6.38161155272915e-06 16.6994070141487 5.65389473699305 1.38051940332114 0.103892802762728 AT5G39360_at 5.96313529040785 5.94609317774383 6.58067145081097 7.05173014511506 7.83740229089318 7.54606655544387 6.11697703205383 6.23487963307527 5.2221802105456 5.64918514002466 6.69819937753566 7.21500760045778 7.14032102495972 7.13026384266837 6.60451363467217 7.47773018587659 7.28774689435526 6.95700225955985 5.80968970107182 0.255522067884929 0.245883718641015 0.251323295329527 0.245155223290630 0.261303334063807 0.262029763774826 0.245051521758354 0.238698732324903 0.271379506577185 0.244122018245544 0.237870247724213 0.235220250422355 0.235220250422355 0.250966162783427 0.251407472254021 0.235220250422355 0.249034840882939 0.235220250422355 0.246372474325252 5 5 - 15770547 15771049 15770833.545 15770220 15771905 - gene protein_coding_gene TRUE TRUE AT5G39360.1 circadian clock coupling factor-related similar to circadian clock coupling factor-related [Arabidopsis thaliana] (TAIR:AT5G15440.1); similar to Os07g0598200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060180.1); similar to Os03g0427000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050411.1); similar to circadian clock coupling factor ZGT [Nicotiana tabacum] (GB:AAK56924.1); contains domain F-box domain (SSF81383) 1.34609637293778 13.5091333757059 5.21606537276813e-08 6.57424259042806e-06 16.6726791816246 12.9717193401387 1.34609637293778 0.0980418836325884 AT5G42000_at 7.01874394321232 7.24483755058883 8.24116114331559 8.4781108722875 9.14502963928643 8.70151355743089 7.74315163002385 7.87052329743022 7.02112109361114 6.31675973347684 8.4522520349165 8.28610928390516 8.50159115532223 8.25222718619184 8.04968726350084 7.79999205612788 7.96537383279605 8.16871470969082 6.66384806534427 0.188110020751527 0.18627833334691 0.192938030669908 0.188045436061689 0.187669479693615 0.191008894022222 0.180856460925915 0.186394997820827 0.20864342202806 0.209256820721953 0.184584661703896 0.185100322964481 0.180856460925915 0.189245125580631 0.180856460925915 0.183822213745670 0.188019689566606 0.187296276601887 0.216845659046111 5 5|0 +|/ 16816685 16817855 16817253.333 16816582 16818256 + gene protein_coding_gene TRUE TRUE AT5G42000.1 ORMDL family protein similar to ORMDL family protein [Arabidopsis thaliana] (TAIR:AT1G01230.1); similar to Os02g0673600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047715.1); similar to unknown [Narcissus pseudonarcissus] (GB:AAL69388.1); similar to OSIGBa0103M18.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66850.1); contains InterPro domain ORMDL; (InterPro:IPR007203) 1.34469508696431 13.5010041543802 5.24770434898677e-08 6.59494847132448e-06 16.6677243117071 15.4812521564222 1.34469508696431 0.0979241019819602 AT5G67500_at 9.25069630590933 9.27319046380584 9.9555581695346 10.0475695814776 9.557562789193 9.5367436238386 9.2229442825088 9.27497212056095 8.25205630381325 8.1636272766962 9.56671602125098 9.72311884913426 9.6645294624204 9.5819365170525 9.84962570977166 9.61380884624084 9.35132532890082 9.5505229296015 7.48573730216458 0.119697991918577 0.124518447205588 0.120847462551262 0.120093642216036 0.120936587564826 0.125190118521512 0.12153886598555 0.123797464876395 0.145166099506534 0.137508811245338 0.119296452685738 0.120978299301070 0.119233555779525 0.120860937912921 0.123433223966865 0.120590173409593 0.129368534016542 0.119876560296435 0.166250955593907 5 5|0 +|/ 26953579 26954252 26953898.9 26952388 26954709 + gene protein_coding_gene TRUE TRUE AT5G67500.1 porin, putative similar to porin, putative [Arabidopsis thaliana] (TAIR:AT3G49920.1); similar to porin-like protein [Brassica napus] (GB:AAW22622.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) 1.08223270581833 13.4940763363 5.2748325116047e-08 6.60988217345874e-06 16.6634985125834 18.3048237932392 1.08223270581833 0.0190457807434520 AT5G11860_at 6.82060733620617 7.11027918951842 8.43614992983636 8.15107088220721 8.53044628269532 8.29653285896764 6.8594671425026 6.56282382818592 6.53445920815713 6.5041624513968 7.50670069811238 7.40956255691731 7.4891075070852 7.65902488735511 7.28529239536542 7.59930039004865 7.99581485985644 7.85127360306875 6.30697910683847 0.195942575531079 0.196048234034979 0.212312018061935 0.213249374345440 0.200673693602130 0.203858987160096 0.199035744754875 0.202012178662568 0.203760148105336 0.201772570805927 0.201642959192813 0.191825030799167 0.198574251598724 0.198042593987529 0.193621823336082 0.191825030799167 0.217740267714654 0.197069889951971 0.207995653315967 5 5|0 -|/ 3822031 3823041 3822563.8 3821804 3824276 - gene protein_coding_gene TRUE TRUE AT5G11860.1|AT5G11860.2|AT5G11860.3|AT5G11860.4 NLI interacting factor (NIF) family protein|phosphoric monoester hydrolase similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT5G46410.1); similar to Os03g0850100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051903.1); similar to hypothetical protein DDBDRAFT_0219547 [Dictyostelium discoideum AX4] (GB:XP_635771.1); contains InterPro domain Dullard-like phosphatase domain; (InterPro:IPR011948); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 1.33311581887602 13.4796996844355 5.33161787718903e-08 6.66178608559835e-06 16.6547196981098 14.6199437817768 1.33311581887602 0.0960246930707549 AT5G27380_at 10.3236106451789 10.2352421460322 10.8448551120858 10.7817660342817 10.9527806522806 10.8286627301241 9.30535622998083 9.0836216277123 9.4099606675023 9.61806736633821 10.7424136094363 10.7379071430535 10.5386725413146 10.6750327584848 10.5708783662175 10.7406744600656 10.6823524059292 10.6257871711781 9.47411670822646 0.0930364366332775 0.0884351135770228 0.092746106898785 0.0896824465975557 0.0897555954345984 0.0912905754837864 0.0888629062573158 0.0994117149877655 0.0999799700407705 0.0995918094243689 0.0901319482769809 0.0905996508681139 0.0930887850409906 0.0911207082072415 0.0917505892212856 0.0885701395257093 0.089678411817418 0.0927052846704597 0.0957436075068558 5 5 - 9668236 9669007 9668684.455 9667974 9670965 - gene protein_coding_gene TRUE TRUE AT5G27380.1 GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. Identical to Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) (GSH2) [Arabidopsis Thaliana] (GB:P46416;GB:Q8H171;GB:Q9SMW4;GB:Q9SMW5); similar to Glutathione synthetase, chloroplast precursor (Glutathione synthase) (GSH synthetase) (GSH-S) (GB:P46416); similar to Glutathione synthetase, chloroplast precursor (Glutathione synthase) (GSH synthetase) (GSH-S) (GB:O23732); similar to glutathione synthetase GSHS1 [Medicago truncatula] (GB:AAK93946.1); contains InterPro domain Eukaryotic glutathione synthase, ATP-binding; (InterPro:IPR005615); contains InterPro domain Eukaryotic glutathione synthase; (InterPro:IPR004887) 1.13927918145233 13.4644348735846 5.3926412332487e-08 6.71702064438094e-06 16.6453846257085 20.3769517577007 1.13927918145233 0.0478209614508306 AT5G55550_at 4.65856058291063 5.08363753281668 6.09928935912085 6.12525748529289 6.60342275048154 6.43860496412183 5.50004633351854 5.16696880406963 5.32481550299663 5.64042707193596 7.45395817557184 6.98456568357327 6.48810893869506 7.42194892757371 6.57352198579423 6.89611995325497 6.33124699422779 6.44899797994802 5.11130968928735 0.220361992380113 0.214378700825316 0.223865295675560 0.21790466770214 0.216267402410584 0.224501039529892 0.217161265217885 0.220123229694681 0.237616119547125 0.217579000540723 0.215852748109685 0.214378700825316 0.226716697333295 0.219090087245824 0.220165159331904 0.214378700825316 0.228939375571203 0.234415219154667 0.217366651735184 5 5 - 22519459 22519917 22519672.545 22518761 22521237 - gene protein_coding_gene TRUE TRUE AT5G55550.1|AT5G55550.2|AT5G55550.3 RNA recognition motif (RRM)-containing protein similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G26650.2); similar to RNA-binding protein, putative [Musa acuminata] (GB:ABF70162.1); similar to Os07g0584500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060120.1); similar to Os11g0637700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068335.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.34014907575764 13.4609179513421 5.40680824833076e-08 6.71702064438094e-06 16.6432318450626 11.8013031438265 1.34014907575764 0.0978134445214 AT5G64310_at 3.80684756563641 4.16614816382826 5.74650797789936 6.00573736027284 4.08604683383962 3.95442695035638 3.95230917338224 4.27499444375112 4.28588583472558 4.34275834385665 5.60476208271214 6.26687519873735 5.34942046697783 6.23432907343525 6.85140931303008 6.27257604941137 6.04962402410447 5.26332679134142 3.99937078909356 0.294177663552272 0.273625224290775 0.278288557356906 0.273032310608549 0.268966430313466 0.280020007577954 0.275520291763851 0.271327623039054 0.280237786775488 0.268966430313466 0.274157523739348 0.268966430313466 0.268966430313466 0.273466588596272 0.273495636647070 0.281896459347106 0.268966430313466 0.279869847318250 0.268966430313466 5 5 + 25739244 25739611 25739439.273 25739159 25739872 + gene protein_coding_gene TRUE TRUE AT5G64310.1 AGP1 (ARABINOGALACTAN-PROTEIN 1) Encodes arabinogalactan-protein (AGP1). Identical to Classical arabinogalactan protein 1 precursor (AGP1) [Arabidopsis Thaliana] (GB:Q8LCN5;GB:Q94A23;GB:Q9ZT19); similar to AGP7 (Arabinogalactan protein 7) [Arabidopsis thaliana] (TAIR:AT5G65390.1); similar to arabinogalactan-protein precursor [Medicago truncatula] (GB:ABE93073.1) 1.33765349817634 13.4490993723396 5.45471423202847e-08 6.7571739827672e-06 16.6359918578913 9.59706665738445 1.33765349817634 0.0975491763652288 AT5G39250_at 4.74528736480015 5.40587150543187 5.88026999643195 6.15142929765746 6.41024106492649 6.29737163757956 4.09958785519029 4.12139951874444 3.86040478466672 3.55319818656264 4.93244200191765 5.24962745561602 5.02789574177678 5.37018022869373 4.54877285813286 5.18368900258176 5.2553070104095 5.14652557668073 3.71743417526963 0.258239764430456 0.253164255037204 0.262046616379918 0.259637675154179 0.269355139008253 0.263354823909958 0.253551424010395 0.25913748427776 0.258330488154566 0.261664318385386 0.256224307137238 0.253164255037204 0.254981462163156 0.253164255037204 0.253491099166736 0.256607177479619 0.279416755014096 0.262697995982397 0.261440411139792 5 5 + 15742321 15742742 15742576.818 15741715 15742984 + gene protein_coding_gene TRUE TRUE AT5G39250.1 F-box family protein similar to F-box family protein-like [Solanum tuberosum] (GB:ABB29946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 1.48537535354182 13.4383433802997 5.49871521494378e-08 6.79227488427857e-06 16.6293953061958 9.78875763008317 1.48537535354182 0.125164593121902 AT5G40580_at 8.14773491897241 8.48855215308784 9.69576674464832 9.54703961589219 9.8599273414694 9.45805303496493 8.57276489972407 8.29580261317456 8.32553458612622 7.53149210181795 9.42183937166798 9.27706312308941 9.36858114541708 9.47826795372614 9.19488312886718 9.19064927263951 8.99389409907116 9.38614660740419 7.52013665093538 0.141949290671006 0.122893968518887 0.132168389926077 0.123539280157207 0.124220783382787 0.130787088283340 0.122628778965413 0.124946484766643 0.129586446813028 0.128910824705124 0.120574871712804 0.120574871712804 0.121064196156297 0.121708087487287 0.123394151711212 0.12288956465301 0.127684062159989 0.128446341398439 0.130936101264082 5 5|0 -|/ 16265792 16266981 16266472.9 16265514 16268100 - gene protein_coding_gene TRUE TRUE AT5G40580.1|AT5G40580.2 PBB2 (20S proteasome beta subunit B 2); peptidase Encodes 20S proteasome beta subunit PBB2 (PBB2). Identical to Proteasome subunit beta type 7-B precursor (EC 3.4.25.1) (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) (PBB2) [Arabidopsis Thaliana] (GB:Q7DLS1;GB:O23709;GB:Q8LAK8;GB:Q8RWL9); similar to PBB1 (20S proteasome beta subunit B 1), peptidase [Arabidopsis thaliana] (TAIR:AT3G27430.2); similar to Os05g0187000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054834.1); similar to proteasome subunit beta type 7 [Dictyostelium discoideum AX4] (GB:XP_638961.1); contains InterPro domain Peptidase T1A, proteasome beta-subunit; (InterPro:IPR000243); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) 1.38025542305640 13.4332343412237 5.51975078330977e-08 6.79888896601129e-06 16.6262594731340 17.5488568489226 1.38025542305640 0.106183838977243 AT5G39050_at 6.72858797575642 7.46161554165723 9.79432165053857 10.2384247607467 8.62141038577982 7.67086802532235 5.89089640365475 5.92929763209894 4.3240814803642 4.02080558289235 5.41133014605686 5.3603218545048 5.58652362153276 6.00337317932088 4.58529496126652 6.04387710952893 5.52925660941256 5.96884887949552 3.3715179832129 0.292821243462673 0.300846497513902 0.313491742735636 0.30822982269727 0.302773594707400 0.32195405677031 0.291729659477148 0.293721402479111 0.295003317822350 0.300858718740977 0.293173775350650 0.29108549153878 0.297565523085212 0.293566721165271 0.292976898118132 0.288726727729860 0.316820048194505 0.291480448094600 0.296121356126116 5 5 + 15652312 15652810 15652620.455 15651815 15653293 + gene protein_coding_gene TRUE TRUE AT5G39050.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 2.11714588181086 13.4283632608717 5.5398882630372e-08 6.8042134487631e-06 16.6232681903713 12.5252136189258 2.11714588181086 0.221588534611252 AT5G18830_at 6.12935348934001 6.0728221190182 7.57255530365495 7.57581364764783 7.37137849851503 7.21982589827108 7.0636419545301 7.03688604818244 4.99292761109518 5.73883951264112 6.36300246626967 7.2763765378467 6.92998230874597 7.26915542393583 6.87085464420738 7.6942659525771 6.9760417152379 7.04285581455813 6.4608891708219 0.224334496185097 0.223967204902846 0.224884144702323 0.232002561409996 0.220443462983132 0.230259047507797 0.226550413327183 0.227455953201902 0.232750668665184 0.226433129138341 0.223855096145178 0.220468682874262 0.220493607600006 0.233030992568250 0.221813920559196 0.219394783726548 0.249738827630256 0.231872993567364 0.230259630650656 5 5 + 6279418 6280177 6279774.455 6276024 6280683 + gene protein_coding_gene TRUE TRUE AT5G18830.1|AT5G18830.2 SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7); DNA binding / transcription factor SQUAMOSA promoter binding proteins Identical to Squamosa promoter-binding-like protein 7 (SPL7) [Arabidopsis Thaliana] (GB:Q8S9G8;GB:Q8VZV0;GB:Q9S723;GB:Q9SMY1); similar to SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G47070.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96886.1); contains InterPro domain SBP; (InterPro:IPR004333) 1.09057443032873 13.42460972807 5.55546030299871e-08 6.8042134487631e-06 16.6209621802893 13.3971357646158 1.09057443032873 0.028378053282593 AT5G61500_at 8.76647574721693 8.8905011284771 9.99198159057566 9.9654366145582 10.2578070101615 10.0198347176615 8.66700415560213 8.60651479375456 8.46747651777485 8.37070628129321 9.50847820292685 9.29021783344624 9.48316372952663 9.55001300116508 9.15360085025102 9.71959543495834 9.25364956045311 9.17636476354859 8.50982953648673 0.114992112941460 0.111024745506800 0.111134499351173 0.112243916738551 0.114933415517125 0.117887761457004 0.118408819705988 0.114544203141193 0.118026118309649 0.126164958467419 0.112237611012560 0.111024745506800 0.115868832056261 0.118848845844849 0.115944547740229 0.111024745506800 0.126802509487715 0.118495386099836 0.119399403427162 5 0|5 /|- 24751442 24752488 24752028.889 24751013 24754079 - gene protein_coding_gene TRUE TRUE AT5G61500.1 autophagy 3 (APG3) similar to autophagocytosis protein [Sisymbrium irio] (GB:AAR15430.1); contains InterPro domain Autophagocytosis associated protein, C-terminal; (InterPro:IPR007135); contains InterPro domain Autophagocytosis associated protein, N-terminal; (InterPro:IPR007134) 1.13434450191304 13.4059454664846 5.63360291927719e-08 6.88048452007099e-06 16.6094826862982 18.3163059033606 1.13434450191304 0.0478259680702684 AT5G11670_at 11.3610432050214 11.3657232240405 12.0682522079762 12.0810986223133 12.1954419898388 11.9473579548357 10.6073837010596 10.4950330528056 10.4698063524908 10.4084288300713 11.6913772668446 11.6252566539467 11.6120114095084 11.6450525127579 11.4086016178158 11.4516171080192 11.2419926564978 11.6399427815448 10.2956214571267 0.0790999936250894 0.0732951919526204 0.077760486507275 0.0742721463278664 0.0732951919526204 0.0757723548142184 0.0775973844534922 0.0739434349320045 0.0800271353644968 0.0741245632092585 0.0739018030959109 0.0742591415214827 0.0745101155506123 0.0770828445561137 0.0732951919526204 0.0734086732525376 0.0813135459552426 0.075142569031076 0.0739021811740458 5 0|5 /|+ 3757027 3757963 3757542.75 3754250 3758243 + gene protein_coding_gene TRUE TRUE AT5G11670.1 ATNADP-ME2 (NADP-MALIC ENZYME 2); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis. similar to ATNADP-ME4 (NADP-MALIC ENZYME 4), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT1G79750.1); similar to ATNADP-ME3 (NADP-MALIC ENZYME 3), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT5G25880.1); similar to ATNADP-ME1 (NADP-MALIC ENZYME 1), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT2G19900.1); similar to NADP-dependent malic enzyme (NADP-ME) (GB:P12628); similar to NADP dependent malic enzyme [Phaseolus vulgaris] (GB:CAA56354.1); similar to NADP-malic enzyme [Aloe arborescens] (GB:BAA24950.1); contains InterPro domain Malic enzyme, NAD-binding; (InterPro:IPR012302); contains InterPro domain Malic enzyme, N-terminal; (InterPro:IPR012301); contains InterPro domain Malic oxidoreductase; (InterPro:IPR001891) 1.13196892615659 13.3993025326952 5.66170351348844e-08 6.89538099174959e-06 16.6053917183038 22.4805502684513 1.13196892615659 0.0471888335779223 AT5G40250_at 4.75584640819769 4.96960873425199 6.72628828005021 6.64987356986324 6.70436217491273 6.92254966667329 5.55001064169248 5.75928045286668 5.1706062336071 5.60137633186911 6.17190295058491 6.43117827732735 6.37821332314459 6.46063326711943 6.23386308315015 6.64390638957161 6.34781218313735 6.24102428222649 5.65027950285522 0.202230741742504 0.198156339223327 0.199809760657544 0.199793766892863 0.195596057123078 0.210898022759868 0.200140453468733 0.215124104623738 0.202346001504325 0.206493202526728 0.202746951590045 0.199639181192672 0.196444696056486 0.199544472554005 0.198912734021808 0.198205236036265 0.211385048686253 0.19963994991454 0.200798036218413 5 5 + 16103847 16104352 16104116.636 16102992 16104769 + gene protein_coding_gene TRUE TRUE AT5G40250.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5I (ATL5I) [Arabidopsis Thaliana] (GB:Q9FL07); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G23980.1); similar to RING finger 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD36516.1); similar to Os02g0743100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048093.1); similar to Os06g0233200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057231.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.19078061352246 13.3861281220687 5.71788602269125e-08 6.9403792399961e-06 16.5972703061387 11.9235545288851 1.19078061352246 0.0654259186092451 AT5G56500_at 5.29723051478035 5.54615298895161 6.5773189608101 6.47416883077175 6.32395398356859 6.18481056011849 5.8906395408864 5.47029399141422 3.73014683077383 4.62802146983987 5.8501628022874 5.99359524144362 5.972827890846 5.69507689865547 6.20697733595134 6.02633515052105 6.25183470819289 6.05232731350038 4.41831204480953 0.226462146093161 0.225221644783115 0.224619016841645 0.226091220872322 0.229805051270846 0.238907517132450 0.228396530747240 0.232035320692491 0.237873857429752 0.227017794218982 0.228142676340398 0.224619016841645 0.224619016841645 0.23277866543754 0.227171493141375 0.224619016841645 0.243049718723490 0.232728479456682 0.228355932647636 5 0|5 /|+ 22893442 22894066 22893759.667 22891017 22894625 + gene protein_coding_gene TRUE TRUE AT5G56500.1|AT5G56500.2 ATP binding / protein binding / unfolded protein binding similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT1G26230.1); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13470.1); similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.2); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P08927); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P21241); similar to chaperonin-60 beta subunit (GB:AAB39827.1); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain chaperonin GroEL; (InterPro:IPR012723) 1.29314960533806 13.3830457405500 5.73111838744938e-08 6.9403792399961e-06 16.5953686020106 11.1030556461539 1.29314960533806 0.0896973591900511 AT5G09330_at 8.07178467012405 8.03486303004505 9.39417420946328 9.14571583470821 9.13769215391201 8.77668226128758 7.35100343151863 7.31645828562319 7.57359049343467 7.19881462877785 8.5381696296344 8.58296226132321 8.83470888357267 8.33478065144328 8.33291182360668 8.76554250311288 8.25005566310662 8.25048380157914 7.54589535267053 0.167297761352963 0.167297761352963 0.188785463411604 0.17703730857638 0.172399576567795 0.183321388121693 0.177380556319535 0.17577994851401 0.203167681947619 0.184258109069301 0.167297761352963 0.169926132564891 0.167297761352963 0.172653543468769 0.169496220714051 0.171017280884957 0.177326899262784 0.187789429465172 0.183102676114051 5 5 - 2892637 2893191 2892920.273 2892366 2895423 - gene protein_coding_gene TRUE TRUE AT5G09330.1|AT5G09330.2|AT5G09330.3 ANAC082 (Arabidopsis NAC domain containing protein 82); transcription factor|ANAC082 (Arabidopsis NAC domain containing protein 82) similar to ANAC103 (Arabidopsis NAC domain containing protein 103), transcription factor [Arabidopsis thaliana] (TAIR:AT5G64060.1); similar to NAC1 [Medicago truncatula] (GB:AAF68626.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.23340358552986 13.3794322368722 5.74667330245043e-08 6.9403792399961e-06 16.5931384636538 16.3663644314853 1.23340358552986 0.0763436452525447 AT5G61600_at 7.47628611206914 7.78309807954538 8.59083104086816 8.52131351326371 8.8345989028645 8.30240374098467 4.05775017282027 4.17845792692944 4.78894792010652 4.29164239700048 4.58607494150254 4.51569165372367 4.18984029654292 4.51483006817424 4.14720453314241 3.98456286992555 4.51948630966117 4.69774499467754 3.85037901604164 0.274329567766962 0.277468283598877 0.275493677060486 0.278860346633728 0.279910347011028 0.281350451674340 0.261741520930958 0.261165018489577 0.261609901131333 0.263310478728144 0.270566910314637 0.261165018489577 0.261165018489577 0.262385902452776 0.276966004554753 0.26647650163942 0.264888371645869 0.268380087159991 0.264132306218089 5 5 - 24783909 24784409 24784136.636 24783612 24784656 - gene protein_coding_gene TRUE TRUE AT5G61600.1 ethylene-responsive element-binding family protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G51190.1); similar to ethylene responsive element binding protein C4 [Capsicum annuum] (GB:AAX20037.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.38624753701170 13.3471887195390 5.88752479543914e-08 7.09073721852343e-06 16.5732027402482 11.5704687209023 1.38624753701170 0.109006351425289 AT5G18540_at 4.36924339463051 4.21887149705215 4.82794693448711 4.94353090039284 5.92175564849162 5.2790422121907 2.24567348314464 2.71932671198625 2.80347139993032 2.90359847433601 4.49346533400282 4.2886488402288 4.24409166704811 4.58760724047137 3.95504137549669 4.05015083030433 4.56373677846335 3.95951357171766 3.21908223652272 0.259739193114011 0.260386116195259 0.268033484217388 0.263660443648535 0.289068702366307 0.277965374337705 0.259088506217636 0.272192080234917 0.269942967255919 0.262158526350013 0.260010853255488 0.26122649491315 0.259088506217636 0.264818385286730 0.26033323318791 0.259088506217636 0.259088506217636 0.262521372351583 0.266647795421317 5 5|0 +|/ 6153933 6154260 6154141.286 6153871 6156168 + gene protein_coding_gene TRUE TRUE AT5G18540.1|AT5G18540.2 similar to Os07g0669600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060588.1) 1.57359403498707 13.3379747361325 5.92846257283881e-08 7.11461184363893e-06 16.5674939244024 7.93725684362014 1.57359403498707 0.1420102327796 AT5G10710_at 5.51752178860646 5.72959296691422 7.37993297494493 7.0905166586085 7.54491976194807 7.18777093016783 5.31576213593984 5.34630975354692 5.12122217345594 5.37997002352303 6.07692731726633 5.64612861948321 6.45606446688806 6.072202447775 6.15582984857906 6.64725568105583 6.81491159635371 6.12305535017459 6.03991530438069 0.206135902098548 0.199179469030028 0.195786007212086 0.201826838874496 0.198793913535058 0.205624455906205 0.198493674976218 0.214703584069808 0.213445596117565 0.195786007212086 0.200345773655473 0.195786007212086 0.200326925049767 0.201320415323996 0.201261834558964 0.1969176435211 0.199412773383419 0.205511772806433 0.201598231546977 5 5|0 +|/ 3381400 3382474 3382037 3379050 3382780 + gene protein_coding_gene TRUE TRUE AT5G10710.1|AT5G10710.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80411.1) 1.27941641782962 13.3336365651051 5.94784437409276e-08 7.11461184363893e-06 16.5648042322069 12.2704155795347 1.27941641782962 0.0877686499183712 AT5G39040_at 7.15452730833145 7.28335870396955 8.44890159434314 8.59869333892996 7.81270060415309 7.53387582280966 7.00190386197759 6.88126338925396 6.15516504222343 6.18931360079823 7.38716096421503 7.71519863464416 7.2350751592064 7.46031067777109 7.23908952014009 7.62376427900838 7.52809978429453 7.48216184083 6.03139403527391 0.145739996209373 0.144523531722809 0.153699082193911 0.158934497452752 0.144523531722809 0.152910989480477 0.144523531722809 0.149597265160080 0.155360480921358 0.153202888958361 0.148272727753091 0.145128931098806 0.146746953287649 0.144523531722809 0.150668430871090 0.144804367857355 0.148514807360347 0.150312267404714 0.14831631259251 5 5 + 15645941 15646810 15646484.727 15642808 15647031 + gene protein_coding_gene TRUE TRUE AT5G39040.1 ATTAP2 (Arabidopsis thaliana transporter associated with antigen processing protein 2); ATPase, coupled to transmembrane movement of substances member of TAP subfamily similar to PGP5 (P-GLYCOPROTEIN 5), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G01830.1); similar to putative ABC-transporter-like protein [Sorghum bicolor] (GB:AAM47580.1); similar to putative ABC transporter [Triticum monococcum] (GB:AAL74186.1); similar to putative ABC transporter [Hordeum vulgare subsp. vulgare] (GB:AAG49002.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.17592311946217 13.3301931773891 5.96327766205655e-08 7.11461184363893e-06 16.5626684715675 14.3814773281105 1.17592311946217 0.0627147039756249 AT5G60590_at 3.9886045694614 3.95423131866496 5.18662921950085 5.40467654754175 4.88559371025235 4.82810874469256 3.31090191140752 3.56268664397312 2.60634444075966 2.56229293752337 3.20683443054282 3.11227729059253 2.85843384635346 3.01989000266198 3.15503625500266 3.37428376025812 3.43463213371815 3.69155614601087 1.67036130697219 0.271589341730714 0.270322699859271 0.297743050341053 0.293463073107078 0.272128512795828 0.288658195081331 0.272030218666117 0.272678590579454 0.282656261146351 0.278086487758723 0.274297013975765 0.27308860796574 0.271742229908460 0.282950510986936 0.275091381461455 0.271054867049234 0.281434144036977 0.269195186148881 0.270854406572719 5 5|0 +|/ 24374296 24375079 24374786.667 24374247 24375976 + gene protein_coding_gene TRUE TRUE AT5G60590.1|AT5G60590.2 yrdC protein-related similar to yrdC protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94505.1); contains InterPro domain SUA5/yciO/yrdC, N-terminal; (InterPro:IPR006070)|similar to yrdC family protein [Arabidopsis thaliana] (TAIR:AT3G01920.1); similar to yrdC protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94505.1); contains InterPro domain Sua5/YciO/YrdC/YwlC; (InterPro:IPR004388); contains InterPro domain SUA5/yciO/yrdC, N-terminal; (InterPro:IPR006070) 1.16204884967215 13.3280322150059 5.97298538722565e-08 7.11461184363893e-06 16.5613277554292 7.1458211889673 1.16204884967215 0.0587943460785364 AT5G61810_at 6.86908890938829 7.24806689382063 7.75239230347708 7.90739597687236 8.5140399578066 7.87423711227014 6.9406559848665 7.12066168411562 6.2149301549655 6.21342927780886 8.8192227375206 8.72242778518089 8.5330224420187 8.8522965197662 7.790666897017 8.1060176812643 7.43060038990594 8.11458385352532 6.18216597031561 0.208764476524899 0.202277600091974 0.214883891868852 0.201323162346847 0.208173515760387 0.208139725905691 0.211217718597983 0.204113294024509 0.217010440605175 0.215051199603593 0.208953182530855 0.208816127310860 0.201051431925154 0.219132364620911 0.202440321824631 0.205998266846427 0.226292963421742 0.204536784908841 0.207355870807203 5 5|0 -|/ 24849101 24849743 24849409 24848845 24851128 - gene protein_coding_gene TRUE TRUE AT5G61810.1|AT5G61810.2 mitochondrial substrate carrier family protein|calcium ion binding similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993)|similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.5299971450685 13.3197649383701 6.0102838356053e-08 7.1394253993577e-06 16.5561958225393 14.7781239808129 1.5299971450685 0.135093545138688 AT5G01800_at 8.73263001892581 9.15441725317596 9.88063151336789 10.0655036586678 10.231957100075 10.0524347409352 8.83154729886287 8.90107351725342 7.83170937837352 8.14384465886552 9.56304437079496 9.31535578867119 9.84420115217667 9.64888883978903 9.10278462405705 9.67170203124496 9.85294891280769 9.33685514008561 8.48030377194994 0.142914000105239 0.134171319235619 0.137175585297289 0.139309921747426 0.145363820327523 0.140220296776541 0.134661942541974 0.13939948171034 0.161507012962211 0.154984360933528 0.143755376277648 0.141537316736441 0.138811532084426 0.146961856317393 0.134953871746872 0.135337246034838 0.140905455956289 0.133670546442004 0.15129848083777 5 0|5 /|+ 307776 308606 308134.333 306965 308905 + gene protein_coding_gene TRUE TRUE AT5G01800.1 saposin B domain-containing protein similar to saposin B domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G51730.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAW57783.1); contains InterPro domain Saposin-like; (InterPro:IPR011001); contains InterPro domain Saposin B; (InterPro:IPR008139); contains InterPro domain Saposin-like type B, 2; (InterPro:IPR008138); contains InterPro domain Saposin; (InterPro:IPR008373); contains InterPro domain Saposin-like type B, 1; (InterPro:IPR007856) 1.27136736779868 13.3160689539445 6.02704055781413e-08 7.13976916638933e-06 16.5539001433662 18.3282369929162 1.27136736779868 0.0863791313822691 AT5G63420_at 5.48141123794144 5.31444535621992 6.24084710513165 6.28690314949006 7.3853273339473 6.77026794613996 4.48009333046956 4.06192777053817 3.90082803854687 4.10218341677681 4.75672012364507 5.10840169362267 5.4944697241956 4.68906357155477 5.88374137759452 5.07881266619212 5.34263631567141 4.97019830287156 3.93181044980699 0.184190754470277 0.181904325302484 0.187655172543719 0.188077339751108 0.184597712690701 0.190266310963956 0.183644848017563 0.181810550807754 0.184484340888114 0.188758485956271 0.182338698840903 0.184386921768253 0.179697572784057 0.1847855357261 0.179697572784057 0.182606956036604 0.185862087418527 0.181945442434951 0.186161844734083 5 5|0 +|/ 25419808 25423003 25421793.632 25417612 25423194 + gene protein_coding_gene TRUE TRUE AT5G63420.1 EMB2746 (EMBRYO DEFECTIVE 2746); catalytic similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase [Medicago truncatula] (GB:ABE82019.1); similar to Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; Homeodomain-related [Medicago truncatula] (GB:ABE78925.1); similar to putative metallo beta subunit lactamase [Oryza sativa (japonica cultivar-group)] (GB:BAD28842.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain RNA-metabolising metallo-beta-lactamase; (InterPro:IPR011108); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.51179923171327 13.3120609421448 6.04526947811994e-08 7.14185030730034e-06 16.5514096856945 10.3245426238824 1.51179923171327 0.132152959293605 AT5G06460_at 7.12814700184695 7.22938764906466 8.06372705685909 8.16502873691643 8.09166265659072 7.96785591847592 6.78355821693655 6.8952813126143 6.78224706059691 6.51815373880344 7.7574464326154 7.8906813461647 7.7106245305952 7.80477008761608 7.93527550563169 7.83578075794241 7.60746232663791 7.97837072885302 6.74133691820669 0.154413521850030 0.146919615025557 0.155782117901476 0.144471839633020 0.154551113054472 0.156680459901762 0.148817945317791 0.147987742426743 0.153708287389678 0.152342254673122 0.146002181035841 0.151877387333285 0.150448066996710 0.148578696607272 0.144093985655535 0.145384848924729 0.167787450557377 0.145369700852977 0.152274866860864 5 5 + 1973786 1974359 1974086.636 1970030 1974528 + gene protein_coding_gene TRUE TRUE AT5G06460.1 ATUBA2 (Arabidopsis thaliana ubiquitin activating enzyme 2); ubiquitin activating enzyme Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. similar to ATUBA1 (Arabidopsis thaliana ubiquitin-activating enzyme 1), ubiquitin activating enzyme [Arabidopsis thaliana] (TAIR:AT2G30110.1); similar to ubiquitin activating enzyme 2 [Nicotiana tabacum] (GB:BAD00984.1); similar to ubiquitin activating enzyme 1 [Nicotiana tabacum] (GB:BAD00983.1); similar to Ubiquitin-activating enzyme E1 2 (GB:P31251); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain Ubiquitin-activating enzyme repeat; (InterPro:IPR000127); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain Ubiquitin-activating enzyme, E1; (InterPro:IPR000011) 1.09872363619982 13.2829462228430 6.17950350267085e-08 7.27535298413731e-06 16.5332883491013 14.7883964205178 1.09872363619982 0.0380412797214409 AT5G56760_at 9.18969744772823 9.2334081098388 9.8435289455288 9.6743417715535 9.97240487538332 9.9406260065392 9.1902680355118 9.21506560378953 7.74579367983205 8.7152985827381 9.9338533931114 9.97668999645058 9.86295897826167 9.96671560295019 9.69414127983704 9.97579719485293 9.89115977051451 9.71205224283904 8.6184664398499 0.126802166779446 0.130267189446051 0.130529718073669 0.129116455919077 0.125623432321879 0.131644717394722 0.130793483596806 0.125915751541769 0.17077780950543 0.135134851290926 0.132310519500661 0.126486759924177 0.124756011468852 0.129989200499784 0.130152458635342 0.127761441199554 0.126615227212368 0.127862191226438 0.144354889864439 5 5|0 -|/ 22978831 22979384 22979027.333 22978535 22979886 - gene protein_coding_gene TRUE TRUE AT5G56760.1 AtSerat1;1 (SERINE ACETYLTRANSFERASE 52); serine O-acetyltransferase Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Identical to Serine acetyltransferase 5 (EC 2.3.1.30) (AtSAT-5) (SAT-c) (AtSERAT1;1) (SAT5) [Arabidopsis Thaliana] (GB:Q42538;GB:Q8LFG6); similar to AtSerat2,2 (SERINE ACETYLTRANSFERASE 1), serine O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT3G13110.1); similar to cytosolic serine acetyltransferase [Thlaspi goesingense] (GB:AAT38563.1); contains InterPro domain Serine acetyltransferase, N-terminal; (InterPro:IPR010493); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Serine O-acetyltransferase; (InterPro:IPR005881); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) 1.08371687853980 13.2803064493585 6.19183383389651e-08 7.27535298413731e-06 16.5316426835662 18.6506795785636 1.08371687853980 0.0310341287163380 AT5G03340_at 6.42413945976883 6.8757246774084 7.39464862771254 7.94057291782264 7.4932801862083 7.60844902516249 5.20445319626576 5.55204419934253 5.30451014150210 5.44563659087134 6.68436323220289 7.16327085231894 7.33284608333376 6.97820803011773 6.57816206954013 7.27874287065514 7.67282676095463 6.94437387372028 6.0224721073216 0.231939696764335 0.232560648964830 0.244027538669899 0.239320258888150 0.236548501707228 0.238664718103420 0.233794991488532 0.243515663236448 0.251511063771944 0.232517429783090 0.235521248128448 0.231896130387541 0.234200148774144 0.231896130387541 0.234655497961709 0.232339055143827 0.248855181162857 0.234680104340785 0.233895379962623 5 5 - 810099 810705 810432.273 809947 813227 - gene protein_coding_gene TRUE TRUE AT5G03340.1 (Cell division control protein 48 homolog E); ATPase Identical to Cell division control protein 48 homolog E (AtCDC48e) (Transitional endoplasmic reticulum ATPase E) (CDC48E) [Arabidopsis Thaliana] (GB:Q9LZF6); similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to CDC48 (CELL DIVISION CYCLE 48), ATPase [Arabidopsis thaliana] (TAIR:AT3G09840.1); similar to putative spindle disassembly related protein CDC48 [Nicotiana tabacum] (GB:ABF59516.1); similar to Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) (GB:P54774); similar to Cell division cycle protein 48, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53974.2); contains InterPro domain Aspartate decarboxylase-like fold; (InterPro:IPR009010); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase, CDC48; (InterPro:IPR005938); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase VAT, N-terminal; (InterPro:IPR003338); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.54168679053527 13.2706814326387 6.23701963345532e-08 7.30863931021805e-06 16.5256386115983 13.1466501202967 1.54168679053527 0.138015396950175 AT5G02030_at 6.52041730699995 6.4766788652144 7.50404168035712 7.81711737422586 8.29348832431676 7.89253221894488 6.14206150300649 6.41192068725373 6.04059786761463 6.38761519909381 7.2550369490735 7.52266032865157 7.60225963074436 7.40918648002793 7.27359328271866 8.06257698297381 7.82573457292975 7.56780085190926 6.75073728665411 0.224515756254530 0.21836863326119 0.218737443392029 0.223298521044661 0.226423752445715 0.227864904781608 0.227453562296581 0.23508608786419 0.231388682795906 0.223451658820512 0.219127838409491 0.21836863326119 0.222027164130864 0.226152766895868 0.222638190594063 0.225687808934824 0.220096274277402 0.221030964899212 0.219823390141015 5 5 + 397962 398713 398505.545 395631 399038 + gene protein_coding_gene TRUE TRUE AT5G02030.1 LSN (LARSON, VAAMANA); DNA binding / transcription factor Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. similar to BLH8 (BEL1-LIKE HOMEODOMAIN 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G27990.1); similar to POX; Homeodomain-related [Medicago truncatula] (GB:ABE84934.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain POX; (InterPro:IPR006563) 1.33044899630013 13.2575390044365 6.29929943709059e-08 7.33565699203904e-06 16.5174309328784 14.1112020380396 1.33044899630013 0.0999410115092912 AT5G43670_at 5.47404578533619 5.72792042624011 6.45205345391496 6.85472721550005 6.94316713956096 7.37426060127233 4.45842790897361 5.17772645504865 3.39831589029416 3.35895943955911 4.77296112857754 4.78563108488701 5.42882240163963 5.21214460843809 5.5003626454779 5.33914078904166 5.38456416377412 5.32019871871674 3.67940116193554 0.238622565502350 0.225887293252511 0.230220455437462 0.236823575753668 0.226607350110482 0.225887293252511 0.225887293252511 0.227529141347549 0.232071643262348 0.237398868717060 0.228085599037500 0.228178298795391 0.227779652580641 0.231278695119186 0.239998283160382 0.225887293252511 0.238122352192574 0.233339460432180 0.230313561691218 5 5 - 17556353 17556821 17556583.909 17555988 17559161 - gene protein_coding_gene TRUE TRUE AT5G43670.1 transport protein, putative similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.2); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT1G05520.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT3G23660.1); similar to conserved hypothetical protein [Coprinopsis cinerea okayama7#130] (GB:EAU89573.1); similar to Vesicle coat complex COPII, subunit SEC23 (ISS) [Ostreococcus tauri] (GB:CAL55059.1); similar to hypothetical protein UM01624.1 [Ustilago maydis 521] (GB:XP_757771.1); contains InterPro domain Sec23/Sec24 beta-sandwich; (InterPro:IPR012990); contains InterPro domain Zinc finger, Sec23/Sec24-type; (InterPro:IPR006895); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Gelsolin region; (InterPro:IPR007123); contains InterPro domain Sec23/Sec24 helical region; (InterPro:IPR006900) 1.71780399365096 13.2444292080349 6.36210013210887e-08 7.33565699203904e-06 16.5092327472192 10.4062263014802 1.71780399365096 0.166872661662847 AT5G64570_at 9.82301604923754 10.0231028180046 11.6142770919704 11.7572290441162 11.3126937784786 10.8475048586358 9.65846921314754 9.28907153025646 8.02968297716457 8.8927342957894 8.59065919004217 7.80658332090326 9.7199897902915 9.49825684765067 8.0618861660061 10.1389789931253 10.7589394409523 9.22198787177903 7.48162268781342 0.164830479932350 0.168237579920488 0.169909044224687 0.167443326577015 0.170732797647456 0.180419517364604 0.170918025554464 0.174629585199433 0.178157348826686 0.176378547964442 0.169760257528797 0.184883212446808 0.172103079971452 0.171403988464766 0.173088719347682 0.164512741273574 0.169716218375154 0.166970237395961 0.190077339913644 5 5 - 25827484 25827918 25827774 25827341 25830561 - gene protein_coding_gene TRUE TRUE AT5G64570.1 XYL4 (beta-xylosidase 4); hydrolase, hydrolyzing O-glycosyl compounds Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] (GB:CAJ65922.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to LEXYL1 [Solanum lycopersicum] (GB:BAC98298.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 1.38724575315501 13.2422371699168 6.37266718785856e-08 7.33565699203904e-06 16.5078608982258 19.220340642739 1.38724575315501 0.111257508895333 AT5G01520_at 7.94404288526272 8.19920638017968 9.94030426470734 9.9369184810143 10.4856340606275 10.4299320454081 9.07493230722708 9.32625613429264 8.253787771995 8.51275346650189 9.4693716371012 8.30574086737233 9.60627685040702 8.96663515250366 8.08006540810598 9.11803790297048 9.68582884977596 9.30858205291046 8.11338819071526 0.157052198008606 0.143998595310252 0.15297980039509 0.148431131556279 0.151589414623521 0.150270359647861 0.145676466764460 0.145008522335805 0.165014286392686 0.153952492804381 0.146356846124996 0.141079419599256 0.143147349617519 0.159093084077890 0.143331877439123 0.146701089663126 0.158346425636954 0.146833044917962 0.151917282454494 5 5|0 +|/ 207545 208359 208043.111 206431 208610 + gene protein_coding_gene TRUE TRUE AT5G01520.1|AT5G01520.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to Os04g0679800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054282.1); similar to H0801D08.18 [Oryza sativa (indica cultivar-group)] (GB:CAJ86260.1); contains InterPro domain Hydroxymethylglutaryl-CoA reductase, NAD-binding; (InterPro:IPR009023); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)|similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93676.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABE80772.1); contains InterPro domain Hydroxymethylglutaryl-CoA reductase, NAD-binding; (InterPro:IPR009023) 1.16817265830238 13.2418164369109 6.37469758196668e-08 7.33565699203904e-06 16.5075975549446 18.0975918947803 1.16817265830238 0.0627275422966117 AT5G65860_at 5.62512314872091 5.87724172299354 6.3343627867268 6.6008908825804 6.78518352142902 6.90746221555256 6.06062509914225 6.38396416967337 4.17785316431828 4.62289798353335 6.26350576904519 7.11764529892634 6.11397545236647 6.66294440620259 6.9207603202056 6.62974495997248 6.25296357645417 6.06630446839833 5.11209573479649 0.178358267917025 0.175235337520380 0.183728713073579 0.179257903702629 0.181684447659147 0.183165609714015 0.178724484055783 0.178194876600098 0.18735976497802 0.189833128081494 0.179940346804517 0.175877186641611 0.183363876782236 0.182351242639501 0.191774810059459 0.178199706278992 0.178663173672059 0.183962281052674 0.180742679015382 5 5 - 26364937 26365438 26365214.091 26364819 26366282 - gene protein_coding_gene TRUE TRUE AT5G65860.1|AT5G65860.2 ankyrin repeat family protein|protein binding similar to ankyrin repeat family protein / methyltransferase-related [Musa acuminata] (GB:ABF70003.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 1.26805061016835 13.2406352992683 6.38040134127547e-08 7.33565699203904e-06 16.5068582027006 11.8924047728502 1.26805061016835 0.0872341825714729 AT5G13190_at 10.3289299319149 10.3596525947952 11.7911023843658 11.7930354520704 11.2089330499049 11.1046381927759 9.3793907154550 9.59982253581086 9.82182646391124 9.55461933574983 10.3132961345601 10.0836112119087 10.3191653768135 10.2896650217304 10.0484657485243 10.4754305365998 10.3980240824368 10.3622007250845 9.51825983466127 0.0890529451248336 0.0836646756527676 0.087758881598064 0.0861527552941013 0.0866132256033604 0.0874365552155287 0.086446190808171 0.086039068328852 0.0832011026414736 0.0851912931106533 0.086027882457773 0.0855577156681967 0.0857283492849114 0.0923979716754685 0.0825490673726809 0.0855733324345909 0.0883390384289877 0.0850636475618656 0.0865022193652816 5 5|0 -|/ 4204999 4206159 4205627.9 4204820 4206408 - gene protein_coding_gene TRUE TRUE AT5G13190.1 similar to LITAF-domain-containing protein [Pisum sativum] (GB:AAY40471.1); similar to Os02g0515600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046956.1); contains InterPro domain LPS-induced tumor necrosis factor alpha factor; (InterPro:IPR006629) 1.10607106760921 13.2399574830614 6.38367705230326e-08 7.33565699203904e-06 16.5064338727248 20.6545885568773 1.10607106760921 0.0425359856616175 AT5G38650_at 9.17101973672161 9.2618912861799 10.1390367549612 10.3033763095011 10.1210168839712 10.1044938223139 8.67976129805378 8.9782424835029 8.13651451225067 8.7523707947389 10.0596753718398 9.7244151563679 9.79383770836424 9.86467124652941 9.51053165002944 9.79702695987282 9.42369031076616 9.34204436445494 8.64001507687989 0.118419360607792 0.114531269044137 0.117795160814325 0.114531269044137 0.114531269044137 0.121655860532058 0.117492958596533 0.117912265931783 0.159125747723688 0.119279857806496 0.116109565323390 0.115596573637738 0.115011064462859 0.121040706666790 0.121406281033620 0.115777562017329 0.127887311786164 0.146810932644656 0.123239502220928 5 5|0 -|/ 15488471 15489864 15489291.333 15488191 15490045 - gene protein_coding_gene TRUE TRUE AT5G38650.1 proteasome maturation factor UMP1 family protein similar to proteasome maturation factor UMP1 family protein [Arabidopsis thaliana] (TAIR:AT1G67250.1); similar to hypothetical protein [Picea mariana] (GB:AAC32110.1); contains InterPro domain Proteasome maturation factor UMP1; (InterPro:IPR008012) 1.16205268815527 13.2376663548352 6.39476305343948e-08 7.33565699203904e-06 16.504999353242 18.6944148505596 1.16205268815527 0.0610932370863227 AT5G63980_at 9.75148938975282 9.9131522739554 10.1163832888042 10.1515557075438 9.8880664824074 9.81177254372419 9.74822802633973 9.672984050063 7.76962659242739 8.81260113566115 10.2882455944029 10.5850008378366 10.0678689455261 10.2128377798078 10.3508374579994 10.0952378150285 10.0747015147000 10.2025282837905 8.2666605649089 0.106800338911518 0.106800338911518 0.108966482468749 0.10774479383754 0.109780737298520 0.108054497398338 0.109712701449310 0.109724032072119 0.157243860639042 0.116575951141867 0.111196654869027 0.108134834222097 0.109113735074472 0.110375109413485 0.111072836778948 0.107993889632146 0.110384649140569 0.106800338911518 0.131397424291784 5 5 + 25628259 25628981 25628549.909 25627038 25629159 + gene protein_coding_gene TRUE TRUE AT5G63980.1 SAL1 (FIERY1); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought, and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Identical to SAL1 phosphatase (3'(2'),5'-bisphosphate nucleotidase 1) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 1) (DPNPase 1) (Inositol-1,4-bisphosphate 1-phosphatase 1) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 1) (IPPase 1) (FIERY1 protein) (SAL1) [Arabidopsis Thaliana] (GB:Q42546); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 1.08608779244807 13.2342573789956 6.41129677941932e-08 7.33565699203904e-06 16.5028643116593 19.1405139918083 1.08608779244807 0.0341117073647462 AT5G09830_at 7.93443650455076 7.7117699909075 8.66699888329864 8.79702529569719 8.86352429588139 8.73264312007293 7.36053225174413 7.37704798651741 7.23692780138285 7.46459787507294 8.5961641024797 8.7062648345086 8.0324104336673 8.31489702246902 8.14706716987064 8.61103293936129 8.45286678201535 8.05637207456369 7.14109495053109 0.161940897693116 0.161784798404166 0.171247324270348 0.164261313139956 0.166707067738410 0.158423081618205 0.165254618040073 0.172631457656355 0.172565937674593 0.170233553338272 0.159380048069873 0.158423081618205 0.176006813021565 0.163703147556617 0.166518530660938 0.158423081618205 0.175157964400771 0.163602147369047 0.181104208825924 5 5|0 -|/ 3057826 3058736 3057997 3057647 3058822 - gene protein_coding_gene TRUE TRUE AT5G09830.1 BolA-like family protein similar to ATSUFE/CPSUFE/EMB1374 (EMBRYO DEFECTIVE 1374), enzyme activator/ transcription regulator [Arabidopsis thaliana] (TAIR:AT4G26500.1); similar to Os01g0866600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044908.1); similar to hypothetical protein MG11028.4 [Magnaporthe grisea 70-15] (GB:XP_359957.1); contains InterPro domain BolA-like protein; (InterPro:IPR002634) 1.12643104642279 13.2340409590843 6.41234799910094e-08 7.33565699203904e-06 16.5027287429811 16.0032512721817 1.12643104642279 0.0501231245180344 AT5G44290_at 8.1803757860345 8.00548318760925 9.31208261074583 9.27963160434311 9.62758397351868 9.33818401353638 8.28604348394854 8.10700894518837 7.92418540278765 7.91548345822097 9.32745783140906 9.0612302429833 9.13059084281606 9.23212077268852 8.75149738762686 9.2370568455122 9.07833487822494 9.01359226760716 8.12361859574099 0.138260584919505 0.133471124405825 0.133424355837089 0.133075439232305 0.130833581781216 0.135402720414839 0.136893745058238 0.135137006303015 0.138965253237745 0.139102155823297 0.131413419577573 0.133086532574662 0.133349270566521 0.13269387426498 0.129704273887091 0.134849133108040 0.131990865919532 0.134536560832259 0.146972185674667 5 5 - 17858000 17858714 17858379.364 17857651 17860937 - gene protein_coding_gene TRUE TRUE AT5G44290.1|AT5G44290.2|AT5G44290.3|AT5G44290.4 protein kinase family protein|kinase similar to kinase [Arabidopsis thaliana] (TAIR:AT1G03740.2); similar to Os08g0112500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060831.1); similar to putative CRK1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD89473.1); similar to Os01g0201000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042320.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.18043267393307 13.2271679856588 6.44583005304301e-08 7.35455494268437e-06 16.4984218631674 17.3129230102114 1.18043267393307 0.0664507807483695 AT5G45160_at 6.56365242686206 6.85278156569223 7.53675408443369 7.7202561138384 8.48513221092848 7.92813998931526 5.84440010016573 5.58434251898717 5.1750706813322 5.14630061240171 5.83185496757136 6.71812267215634 6.30787514162423 6.44830048730677 5.62120411650242 6.73319247333037 6.42003590392408 7.16804459005663 5.36185480784744 0.224060223727943 0.209671455496706 0.222360638746676 0.214475256536142 0.215653147398747 0.212016830748836 0.226306190778780 0.217407144328256 0.215366868516033 0.218131237906897 0.218359202393763 0.225579820085856 0.215899992196502 0.218800511337669 0.222369570845876 0.209767963975961 0.234194124548897 0.215430840276007 0.218506146195041 5 5|0 +|/ 18286485 18287095 18286843.889 18281944 18287510 + gene protein_coding_gene TRUE TRUE AT5G45160.1 root hair defective 3 GTP-binding (RHD3) family protein similar to RHD3 (ROOT HAIR DEFECTIVE 3) [Arabidopsis thaliana] (TAIR:AT3G13870.1); similar to root hair defective 3 GTP-binding (RHD3) family protein [Arabidopsis thaliana] (TAIR:AT1G72960.1); similar to root hair defective 3 GTP-binding protein [Triticum aestivum] (GB:AAS67855.2); similar to Os01g0575000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043388.1); similar to Os12g0604600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067218.1); contains InterPro domain Root hair defective 3 GTP-binding; (InterPro:IPR008803) 1.44230660345037 13.2211921138953 6.47509663635827e-08 7.36855655324437e-06 16.4946747052436 12.8813427902376 1.44230660345037 0.121771833932632 AT5G52530_at 6.99799276246424 7.02726588147551 7.98430406431924 8.09164700115707 8.06821610318213 7.53078885334542 6.49444911335056 6.57158226694614 6.13145242285743 5.88785718954518 7.43915399500555 7.52812683434037 7.1287273456145 7.57492459463628 7.55038734840285 7.72529231869418 7.6494341120596 6.84737218336087 5.87228208460922 0.201762998273161 0.207891499557724 0.204541240536992 0.203461013703342 0.198141205568488 0.209329488178977 0.205444895941745 0.202628400281095 0.213600158413462 0.199433778526919 0.195990844514059 0.196309789426171 0.201330833525189 0.199311571938556 0.202016584486755 0.196077120818542 0.205444134777498 0.203599978090397 0.205380208827857 5 5 + 21337559 21338071 21337770.182 21334366 21338462 + gene protein_coding_gene TRUE TRUE AT5G52530.1|AT5G52530.2 dentin sialophosphoprotein-related similar to Os08g0430000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061852.1); similar to hypothetical protein DDBDRAFT_0192009 [Dictyostelium discoideum AX4] (GB:XP_629009.1) 1.30623997097609 13.2135732815316 6.51261965303862e-08 7.38627246998239e-06 16.4898940409614 14.0429263760391 1.30623997097609 0.095909916353798 AT5G53400_at 7.3002942925846 7.4249332712946 8.42509541456648 8.34912249677198 8.3176885463072 8.01194136593783 7.06817178113088 6.4417050043144 5.18713038727451 5.18848710841962 6.97663726540222 7.05841989376537 7.22259690186686 6.27096286375786 7.04834121152073 6.5938310458257 7.41120623159067 6.60209993740235 5.27305939035393 0.199819177895781 0.197288083827731 0.197867362287723 0.197288083827731 0.200308684119104 0.197288083827731 0.199449476742953 0.206454643294717 0.205997024774555 0.197342403407844 0.199033190483775 0.197288083827731 0.204897202728870 0.198230685052535 0.203711343562896 0.199223606654805 0.207110375725719 0.201690939609734 0.204778533871655 5 0|5 /|+ 21679764 21680402 21680019.75 21678671 21680798 + gene protein_coding_gene TRUE TRUE AT5G53400.1 nuclear movement family protein similar to nuclear movement family protein [Arabidopsis thaliana] (TAIR:AT4G27890.1); similar to salt tolerance protein 5-like protein [Solanum tuberosum] (GB:ABB16978.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain CS; (InterPro:IPR007052) 1.44948607938677 13.2111233007081 6.52473617361888e-08 7.38627246998239e-06 16.4883559427869 13.7244877954006 1.44948607938677 0.123251946825007 AT5G17020_at 7.99054798013748 7.99344046299298 9.2647902090102 8.96677867361075 9.1916530365524 9.10153328885012 8.33982236049839 8.13880404867271 6.8689615802916 7.15229057844848 8.37558581018891 8.37835109757811 8.36615700249984 8.2519999233711 8.28460807595577 8.41246326579805 8.5392864241297 8.39110727131543 7.13132328687781 0.147971897576047 0.147719004286472 0.150917423928657 0.145906643068813 0.153899625898234 0.152987086994853 0.152568799281572 0.147171090259531 0.166671383527118 0.153442444126191 0.146035109254726 0.148814236954625 0.152957070787003 0.146954791479113 0.155881287497802 0.149974003607809 0.154052619379797 0.153376376967440 0.163008694583256 5 5|0 +|/ 5601537 5602407 5601934.111 5594739 5602958 + gene protein_coding_gene TRUE TRUE AT5G17020.1 XPO1A (exportin 1A); protein transporter Encodes a member of the exportin protein family which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals. similar to XPO1B (exportin 1B), protein transporter [Arabidopsis thaliana] (TAIR:AT3G03110.1); similar to retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] (GB:ABG00000.1); similar to Importin-beta, N-terminal [Medicago truncatula] (GB:ABE90433.1); similar to Importin-beta, N-terminal [Medicago truncatula] (GB:ABE91894.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1-like; (InterPro:IPR013598); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 1.16981073295623 13.2032425478047 6.56387771597518e-08 7.41123184757489e-06 16.4834058146523 16.3363229279042 1.16981073295623 0.0641351819704071 AT5G06610_at 4.59538281424585 5.16306307800925 5.5698069942376 5.98448241928787 6.10882935035029 5.50670335895183 2.64877195307604 2.20669899469033 2.69734213694816 2.28766190323608 3.77674939970776 3.99283164427616 3.37909227115045 4.14859315842098 4.24881992869349 3.71154647488429 3.95830587571745 3.8901044356097 2.4294881901309 0.238023958094617 0.232391334624112 0.236477928591575 0.242042686716025 0.234169599235930 0.232391334624112 0.238842731088234 0.251479505410155 0.247135050303074 0.241371630424515 0.232391334624112 0.234149487139954 0.237219949741472 0.237407859218001 0.234538259468388 0.232391334624112 0.23621100856369 0.242211579197117 0.242708940612442 5 5|0 +|/ 2031737 2033571 2033093.2 2029898 2033724 + gene protein_coding_gene TRUE TRUE AT5G06610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27690.1); similar to Lipase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99131.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) 1.77786715457701 13.1756986866453 6.70270266681958e-08 7.54832111485915e-06 16.4660736221552 7.90284377468742 1.77786715457701 0.177514004734314 AT5G63280_at 5.23995020900278 5.25707456154538 6.6612507739905 6.75421200962218 6.98313349104467 6.66175531201659 4.75998294016931 4.262420752851 4.35303887031354 3.96232141331435 4.84047325871431 4.89852977883074 4.83218500634286 5.06824257563162 4.69677744519294 5.31729987743786 5.28397265005779 5.15696869388499 4.32964804044702 0.2196556223625 0.221448368108293 0.221352024128066 0.219357669748005 0.215253760092668 0.219379392131646 0.213424067303469 0.215460258529004 0.222714163023057 0.215055193199357 0.211453478414205 0.211617064619878 0.211453478414205 0.213529405267680 0.214231528774105 0.211453478414205 0.214288029815951 0.217245014509038 0.211789459408608 5 5|0 +|/ 25385178 25385857 25385550.556 25384257 25386523 + gene protein_coding_gene TRUE TRUE AT5G63280.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G40710.1); similar to Os12g0233400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066450.1); similar to PREDICTED: similar to CG4133-PA [Tribolium castaneum] (GB:XP_969705.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.34101708342318 13.1698108670777 6.73279110232033e-08 7.56256251246767e-06 16.4623623804910 10.4358769740069 1.34101708342318 0.103802090817726 AT5G26360_at 7.3255910328788 7.56855485777754 7.94551929909473 8.01331445786954 8.24249578401622 7.8043458327525 7.36220468602424 7.19691046167701 5.62673532272761 6.57832831454337 8.43272696610498 8.78230499334752 8.36986544925018 8.30810119253382 8.42298047754161 8.32832759647268 8.19927352756551 7.44211907430048 6.8760928709814 0.171130183272999 0.171130183272999 0.176198330161996 0.175991489707705 0.180613350144242 0.174180081471744 0.176183416640403 0.175222023220226 0.191402758263867 0.212168333761766 0.171130183272999 0.17483423523347 0.172772457849181 0.175630133365566 0.172498014492681 0.178490254831964 0.184272968964624 0.191940223008997 0.195235063049961 5 5 - 9255566 9256552 9256014.091 9255056 9258994 - gene protein_coding_gene TRUE TRUE AT5G26360.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G11830.1); similar to PREDICTED: similar to Chaperonin containing TCP1, subunit 3 (gamma) isoform 1 [Strongylocentrotus purpuratus] (GB:XP_780013.2); similar to Chaperonin complex component, TCP-1 zeta subunit (CCT6) (ISS) [Ostreococcus tauri] (GB:CAL56638.1); similar to CCT chaperonin gamma subunit [Physarum polycephalum] (GB:AAL35373.1); contains InterPro domain T-complex protein 1, gamma subunit; (InterPro:IPR012719); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) 1.28171524536633 13.1514004724669 6.82782666646374e-08 7.64949323340328e-06 16.4507435294205 15.0054160077065 1.28171524536633 0.0920490045524517 AT5G02040_at 7.00129388596302 6.88386460425297 8.23431897649513 7.84331921169905 8.35820082846822 7.92258200012227 6.33634658883385 5.99021389408687 5.9231954364871 5.32304429044533 6.26180611705768 6.622513514497 7.06622625715243 6.77049321719358 6.91089143351722 6.78309531489215 7.16113159802238 6.90781093143407 5.27897781612449 0.196228055241508 0.196663480827681 0.204448291751292 0.196868022289858 0.20224291312838 0.209747441886208 0.198547218302623 0.206945130704931 0.206448213974591 0.209553510249966 0.194725901991830 0.191992166037672 0.198202368868298 0.202597371074408 0.207534949673675 0.191992166037672 0.211417635047023 0.203553285098033 0.206210017137549 5 5|0 +|/ 401288 402210 401872.125 400896 402948 + gene protein_coding_gene TRUE TRUE AT5G02040.1|AT5G02040.2 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT5G05987.1); similar to Os05g0455600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055724.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82667.1); similar to Os01g0847900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044801.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) 1.41938285559858 13.1296089533145 6.9422084581115e-08 7.75275060450386e-06 16.4369627560104 13.4807184465684 1.41938285559858 0.119425531080282 AT5G46180_at 7.64322903329014 8.07126916711078 9.48212912729059 9.46714394657343 9.50222573769208 9.260871959025 7.53126779284948 7.46761473382866 6.6326500546479 7.20640996465563 7.65361229911049 6.82567247915417 7.71264190363538 7.48678030904374 6.38715541226071 8.00112682073517 8.24173953474662 7.7010387540941 6.40980481955069 0.206926609404206 0.208527034879685 0.213966785031490 0.221025143452701 0.218748262829474 0.211593069106855 0.219262773042313 0.210138947361913 0.224824377723764 0.216604562685175 0.219125212642423 0.207360984083505 0.209354751896784 0.226883252154376 0.227345278518726 0.205201884621454 0.214259309165541 0.216599457501603 0.213196813306673 5 0|5 /|- 18736068 18736594 18736285.556 18735702 18738602 - gene protein_coding_gene TRUE TRUE AT5G46180.1 delta-OAT (ornithine- delta-aminotransferase); ornithine-oxo-acid transaminase ornithine delta-aminotransferase similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to ornithine aminotransferase [Glycine max] (GB:ABA86965.1); similar to ornithine aminotransferase [Vitis vinifera] (GB:AAG09278.1); similar to ornithine aminotransferase [Medicago truncatula] (GB:CAC82185.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814); contains InterPro domain Ornithine aminotransferase; (InterPro:IPR010164) 1.25067341851083 13.1270540692076 6.95575493381363e-08 7.75275060450386e-06 16.4353450711086 15.678640213232 1.25067341851083 0.0857880459105494 AT5G01940_at 2.94036314923241 3.1057174372308 4.84325829174162 4.89116277763634 5.31639405822476 4.92701258319126 2.87648829175193 2.89540723703386 2.8119056328954 2.79019549575848 3.12354082882776 2.71761224027699 3.31841410386926 3.40712703784297 2.6317306334125 3.12902029359044 3.39213478255712 3.30931060769832 2.71065726263858 0.265787498265463 0.274570375598614 0.27691881312068 0.291981726137460 0.298174084241446 0.284632227584159 0.262386713173446 0.258714224134029 0.269371737051191 0.263830994963115 0.255748305168504 0.257125085903806 0.263096373292615 0.255748305168504 0.260442101688908 0.256194155629103 0.259837429229873 0.255866318396069 0.26760450522521 5 5|0 -|/ 363635 364554 363995.222 363591 364766 - gene protein_coding_gene TRUE TRUE AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.3); similar to eukaryotic translation initiation factor 2 beta subunit-like [Solanum tuberosum] (GB:ABB86256.1); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735) 1.19882737556576 13.1184889894186 7.00137906995109e-08 7.78359315183516e-06 16.4299188265524 6.92424086814216 1.19882737556576 0.073749055591739 AT5G54660_at 5.9893894771628 6.207973459287 8.2423353793067 8.17759557047152 7.58643047187736 7.38326131518361 7.56671302429997 7.83129330160984 6.77894231498861 7.36022153221251 8.15994902572823 8.49565712577785 8.5850729881332 8.4341413368672 8.17375715853134 9.09426922361015 8.77187510890559 8.32289542324044 7.12207149898366 0.171265932746706 0.166058037372322 0.162517411608751 0.158837620887062 0.162283498333908 0.168563269690986 0.167167902465721 0.163082217452878 0.185183355989093 0.177075156556228 0.167874923298494 0.164107802602921 0.157414581739028 0.163199587263477 0.157666126642738 0.157414581739028 0.175651020323409 0.16169697063645 0.183664782708242 5 5|0 +|/ 22221209 22222136 22221694.9 22221131 22222378 + gene protein_coding_gene TRUE TRUE AT5G54660.1 heat shock protein-related similar to 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) [Arabidopsis thaliana] (TAIR:AT1G53540.1); similar to small heat shock protein [Retama raetam] (GB:AAL32036.1); similar to Os05g0500500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055964.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 1.18309354687044 13.1105279676707 7.04407793854537e-08 7.81103416733911e-06 16.4248710370405 15.1690143111886 1.18309354687044 0.0699215006054511 AT5G46710_at 5.00502767471255 5.53408231285512 5.22106894306367 5.23974751045165 5.46257988679217 5.7726031336909 3.2141536326914 3.06968725874263 3.4944390935978 3.21773574745042 4.54270824086815 4.59353154444761 4.46088943206126 4.76179893034093 5.34091015320483 5.01960137803697 4.40906868068751 4.79094002716423 2.99859466481576 0.255249508040619 0.243556106409587 0.253841891110187 0.247329421434104 0.244051621099783 0.240804238326313 0.247462788599752 0.263931042742899 0.255611036191455 0.247444596585387 0.240335923131895 0.251837828024872 0.252276105658291 0.244760985518953 0.260337128952798 0.240335923131895 0.24653510499451 0.243406993573623 0.246060369250271 5 5 - 18970102 18970908 18970592.182 18969843 18971919 - gene protein_coding_gene TRUE TRUE AT5G46710.1 zinc-binding family protein similar to zinc-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17900.1); similar to putative zinc-binding protein [Platanus x acerifolia] (GB:CAL25342.1); contains InterPro domain Protein of unknown function DUF597; (InterPro:IPR006734) 1.36063501423964 13.0973930096657 7.11514851984461e-08 7.86971573327948e-06 16.4165337162582 8.80329590261139 1.36063501423964 0.109070115865332 AT5G19180_at 6.40321225815272 6.16148140660504 7.71372455256566 7.39113171256662 7.29419620606949 7.16557765410853 6.01066498717977 5.74074336708663 5.59348924356548 5.56934966910886 6.5743490856983 7.10480104977158 6.44749297243067 6.65841603809071 6.96641248596332 7.1567154282646 6.34541409175253 6.43983821460005 5.40342891625889 0.184794783595959 0.178482966701207 0.194533651840971 0.178585077036779 0.183376206388160 0.191584852641366 0.181166770926694 0.182343299075954 0.186855591354694 0.180622804553992 0.198337791393035 0.186638010709260 0.186901298445972 0.201957864742845 0.182481679113683 0.178603893037375 0.195483210778634 0.184904534207418 0.182610810244687 5 5|0 +|/ 6454656 6455708 6455217.9 6453278 6456016 + gene protein_coding_gene TRUE TRUE AT5G19180.1 ECR1 (E1 C-TERMINAL RELATED 1); small protein activating enzyme Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. Identical to NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-) (RUB- activating enzyme) (Ubiquitin-activating enzyme E1-like protein) (ECR1) [Arabidopsis Thaliana] (GB:O65041;GB:Q94A29); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to Os01g0271500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042708.1); similar to SMT3/SUMO-activating complex, catalytic component UBA2 (ISS) [Ostreococcus tauri] (GB:CAL53137.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain Ubiquitin-activating enzyme repeat; (InterPro:IPR000127); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594) 1.25086133554096 13.078927647534 7.21638492206142e-08 7.9613786977013e-06 16.4047941242252 12.8519761166081 1.25086133554096 0.0868555751061362 AT5G66810_at 6.70848106384351 6.77811786966929 7.91002558455174 7.83675104137144 8.24823907619437 8.07123355676232 7.08763950733803 6.74891236877509 6.70063218774783 6.85341195329102 8.16455404758946 8.19652012792473 7.64033512167855 8.2192833208459 7.66666531659046 8.32511545843141 7.90780295040284 7.83556591608753 6.94404867648588 0.209824273245861 0.205862795974584 0.217041676840940 0.224231627856174 0.206026062236739 0.202629038742980 0.212518182263526 0.211448331631901 0.213644964944835 0.208561590456716 0.207145152107314 0.201948860858039 0.210328221289643 0.206261556888559 0.217095028273669 0.205254372029683 0.221654418460013 0.204589941176214 0.213611053420110 5 5|0 +|/ 26692892 26693608 26693229.4 26690152 26693830 + gene protein_coding_gene TRUE TRUE AT5G66810.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61150.6); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM74330.2); similar to Os10g0382300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064488.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595) 1.17377864445788 13.0707444584846 7.26175006417616e-08 7.9774061308001e-06 16.3995845054168 14.8372639527059 1.17377864445788 0.0684136264427788 AT5G65290_at 4.80177615853756 4.91073446822269 5.96930531733362 5.60146190832637 5.77765140652621 5.63235186748487 3.78234596675228 3.98180625348349 4.1541524243474 3.69749062118618 4.71711539205949 5.48991193289207 4.79955162393555 4.9266051762141 5.18959799486288 4.89959800393214 4.5876882842747 5.21388786785331 3.91680365177787 0.236468037562583 0.241219158179811 0.242774372237928 0.249568342980855 0.257165398271557 0.240899087274252 0.239778470689883 0.256240921877738 0.260049322643313 0.240934365310653 0.237920092787532 0.236468037562583 0.241417316079176 0.236468037562583 0.242173206252498 0.241130812300077 0.245877995347543 0.247793098194813 0.242664376999792 5 5 + 26110891 26111513 26111226.545 26106782 26111774 + gene protein_coding_gene TRUE TRUE AT5G65290.1|AT5G65290.2 LMBR1 integral membrane family protein similar to Os02g0758100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048176.1); similar to LMBR1-like conserved re (GB:ABE91808.1); similar to Os06g0218900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057160.1); contains InterPro domain LMBR1-like conserved region; (InterPro:IPR006876) 1.21560294095066 13.0696733161205 7.26771110974242e-08 7.9774061308001e-06 16.3989022690421 9.50758421847014 1.21560294095066 0.0789396865875954 AT5G20110_at 5.12675364132789 5.01053268581526 6.74220849017005 6.64124967273268 8.12065946525596 7.31156600248049 4.89550895652178 5.02383966252318 4.90550682326499 5.03016324169371 6.65910898489063 5.45262480488216 6.76650785122856 7.23047847643211 4.81185883666643 6.06034829134622 5.95373897882297 5.81335767195013 5.58636713434109 0.228444980470638 0.222521402469042 0.235989767965458 0.227068401302433 0.241955936780771 0.243876418774324 0.230151550829043 0.224250826952173 0.238080422389434 0.224593056594294 0.225237602493687 0.224324856141530 0.227695637539540 0.243045381141325 0.237914422065711 0.221782495644702 0.236713553769049 0.229428446491759 0.227617396767851 5 5 - 6791567 6793180 6792595.273 6791489 6793348 - gene protein_coding_gene TRUE TRUE AT5G20110.1 dynein light chain, putative similar to dynein light chain type 1 family protein [Arabidopsis thaliana] (TAIR:AT1G23220.1); similar to dynein light chain [Vicia faba] (GB:BAD99112.1); similar to Os01g0555600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043322.1); contains InterPro domain Dynein light chain, type 1; (InterPro:IPR001372) 1.55462637918679 13.0639844219670 7.2994599931801e-08 7.99202233800287e-06 16.3952776296551 11.7427975155004 1.55462637918679 0.144249236725898 AT5G48120_at 6.44889851097811 6.5649500352704 7.92461084659295 7.78349143307823 8.34536421394878 7.93854510975818 6.0663077170124 6.4185667494974 5.45052923462195 5.43478724280846 6.18077924298954 6.22763103364904 7.06075423143628 6.12714519076728 6.05859312789304 7.13472427256684 6.6403953037117 6.46700977910266 5.63454100485593 0.232351794045166 0.232490325404186 0.234040221113219 0.234456628438636 0.232351794045166 0.239568671778272 0.232351794045166 0.237249806900609 0.244977272133297 0.235082414428423 0.236457206838659 0.232351794045166 0.232351794045166 0.240204586958238 0.233051902977219 0.232351794045166 0.248285777378358 0.232829769699734 0.236001512949519 5 5|0 -|/ 19525445 19526909 19526296.625 19525140 19532077 - gene protein_coding_gene TRUE TRUE AT5G48120.1 binding similar to hypothetical protein MtrDRAFT_AC123570g3v1 [Medicago truncatula] (GB:ABE84590.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 1.30191600482869 13.0508266929789 7.37347162592364e-08 8.05272093493998e-06 16.3868862350895 13.1832159187804 1.30191600482869 0.0983478735978055 AT5G52660_at 6.14670779653779 6.54174885564348 7.64864834463191 7.7554971150134 8.39727686797969 8.13439929638504 6.96120312572498 7.16198654160204 5.7165113762722 6.03075391128337 6.79507473408845 6.9965152683176 7.35732562239037 7.08502474817409 6.637748539605 7.32203626219867 7.39765188196607 7.2778824173574 5.82008694527931 0.223351570215351 0.217684389424047 0.216365227964492 0.216365227964492 0.222168621235602 0.220798686763295 0.220197151936312 0.222197185863563 0.244477561147616 0.222486985574074 0.221111740816945 0.216365227964492 0.216365227964492 0.216365227964492 0.21907542028186 0.217216757923765 0.226615174623319 0.222350420254631 0.218474532376969 5 5|0 -|/ 21376651 21377727 21377240.7 21376285 21379386 - gene protein_coding_gene TRUE TRUE AT5G52660.1|AT5G52660.2 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT4G01280.1); similar to MYBR5 [Malus x domestica] (GB:AAZ20444.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.26695859138801 13.0469777216169 7.39527614039632e-08 8.05624129713864e-06 16.3844294140876 13.8256542488767 1.26695859138801 0.0910623927915818 AT5G40780_at 11.2387475150774 11.4521988814817 12.1486851400347 12.3120250275699 11.9683876633669 11.4283996993916 9.20722955961509 9.31542144877502 10.1174326108359 9.15080301950721 10.2800098603927 10.022808921035 9.6415434292532 10.6611324499046 9.63653514094001 9.82766718727717 10.0777212696548 10.1818986473404 7.80271502954279 0.111422819175604 0.111422819175604 0.121461219737011 0.115545106657886 0.114705880987440 0.122082561177999 0.116575585308735 0.112966665237014 0.115983926507227 0.119311894458092 0.111997345116472 0.111422819175604 0.114868528292645 0.111810098008983 0.118326563879201 0.111422819175604 0.115046000252697 0.114989261573983 0.143792222366314 5 5|0 +|/ 16343325 16344230 16343808 16340879 16344509 + gene protein_coding_gene TRUE TRUE AT5G40780.1|AT5G40780.2 LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid permease/ amino acid transporter|LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transporter Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G67640.1); similar to LHT2 (LYSINE HISTIDINE TRANSPORTER 2), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G24400.1); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G48640.1); similar to Os12g0244400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066488.1); similar to Os08g0127100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060901.1); similar to histidine amino acid transporter [Oryza sativa (indica cultivar-group)] (GB:CAD89802.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.33924471230812 13.0407682484582 7.43060113955427e-08 8.06220878518686e-06 16.3804638422948 20.6662942835074 1.33924471230812 0.10604931714598 AT5G52580_at 4.78680400185989 5.29889542411444 5.9926513891132 6.27661372410211 6.52300128468848 6.50034016356653 5.10358616742562 5.38784475626486 4.41384279553409 3.83153448436741 5.63954899186204 5.85539195338955 6.12616478152541 5.82945857371921 5.3403696148179 5.8409632838098 5.10093713052501 5.26893570013578 3.92506406910439 0.269125187059791 0.258024787491877 0.270499236204199 0.275467849278788 0.257812356327801 0.269691571873152 0.266359606169649 0.262508682396322 0.270975142186452 0.270998992122168 0.264478503514707 0.264315117354254 0.258921594007055 0.269772550137094 0.261352190176142 0.259000435267181 0.284482321217128 0.269707747528906 0.266692249298507 5 5|0 +|/ 21356554 21357172 21356883.1 21355278 21357204 + gene protein_coding_gene TRUE TRUE AT5G52580.1 similar to Os02g0709800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047892.1); similar to RabGAP/TBC domain-containing protein [Dictyostelium discoideum AX4] (GB:XP_636536.1) 1.37363826183625 13.0394815910709 7.4379437514302e-08 8.06220878518686e-06 16.3796418275623 10.5747346322544 1.37363826183625 0.112710105863125 AT5G13500_at 6.69988790759362 6.91110562742471 7.6819841598238 7.58811224791867 7.75058620711015 7.48338453079503 6.16349859398831 6.26392861365504 6.84772647223871 6.14176675460814 7.56954592625497 7.47677771304344 7.77145301206611 7.46069303234596 7.22901918458138 7.61742281670185 7.28845939782064 7.51942377358712 5.9191744184477 0.184967273083830 0.187983490955117 0.190589999031293 0.190214880177641 0.193835143339048 0.187364887885950 0.189710404346134 0.204090439250500 0.201056924336860 0.205966231657340 0.185975670819051 0.187300044085766 0.184967273083830 0.191003647925848 0.189460553610318 0.188901575339513 0.187786224730014 0.184967273083830 0.204698697645893 5 5|0 +|/ 4339344 4340354 4339673 4338158 4341006 + gene protein_coding_gene TRUE TRUE AT5G13500.1|AT5G13500.2|AT5G13500.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25265.1); similar to Os01g0272600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042710.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72305.1); similar to Os05g0386000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055418.1) 1.15256087134925 13.0315119628430 7.48360074485284e-08 8.09146908761723e-06 16.3745478233323 13.9650552721128 1.15256087134925 0.0635626236365804 AT5G39020_at 6.25671315572601 6.62912269488329 7.69567784739975 7.69219196124018 7.69271368450776 7.00059726109039 3.69430947944298 4.09504224543213 6.11591437538476 5.41906954177246 6.74691218149734 7.0269485492587 6.46440608901262 7.0848233642943 5.85739848443635 6.84752694226235 6.02009303974107 6.48102965018077 5.61095020121017 0.226373631103158 0.209831698774848 0.218427313608296 0.219184394888012 0.204849312280750 0.226876031962056 0.229804841681543 0.219865640117724 0.22316171967524 0.209906743881115 0.210523339058464 0.212352738639998 0.212755585566962 0.221460675115811 0.214607347803408 0.204849312280750 0.216504185414919 0.222243154898617 0.210413061830677 5 5 + 15636007 15636556 15636285.182 15634147 15636588 + gene protein_coding_gene TRUE TRUE AT5G39020.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39000.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38990.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39030.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.60116460474236 13.0271999748611 7.50843076482725e-08 8.09812115283078e-06 16.3717899761441 12.4852728714026 1.60116460474236 0.152672362122503 AT5G62470_at 4.33962331992331 5.54421816520054 7.61718974139715 7.51738026160319 8.76792913196122 8.71042424699978 6.70472074194457 6.74816043582212 6.93605081170345 6.5330759541604 8.72533869318146 8.35650760816834 8.58007221520388 8.58292619006422 8.01743091108041 7.75571514371514 8.12241129537112 8.45374481051782 6.64765006093438 0.223251082261630 0.206961679098536 0.199202471201879 0.195180184629813 0.199231886671027 0.196958133121109 0.197727208644575 0.193299727526639 0.204285907565707 0.192480349162452 0.201887246665368 0.196960583774903 0.201856979374199 0.190787127203282 0.195967549546752 0.193983375411332 0.203882508605559 0.195889621247547 0.193927029255734 5 5 - 25096735 25097158 25096969.273 25096217 25098327 - gene protein_coding_gene TRUE TRUE AT5G62470.1|AT5G62470.2 MYB96 (myb domain protein 96); DNA binding / transcription factor Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. similar to MYB94 (myb domain protein 94), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47600.1); similar to MYB60-like protein [Vitis vinifera] (GB:ABK59040.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.96886313129054 13.0121187034344 7.59598253427079e-08 8.15930975180157e-06 16.3621348191213 14.5086360726126 1.96886313129054 0.209546581819905 AT5G56900_at 5.72531719106656 6.03205809177568 6.88920241128758 6.90167892880873 7.91570400998298 7.39869739192165 5.97214794022037 5.59732574346684 5.21873555290991 5.26893366487311 7.27989130790725 6.92636385037349 7.07596271601773 6.58234605304059 5.96455633999185 6.99736129579153 7.0995215067145 6.56523088423199 5.7368819601359 0.257381767536182 0.243391009428790 0.265780891541858 0.264378525386259 0.252375546931773 0.251334076619887 0.255087745522753 0.247683659734391 0.249461589828627 0.253866472060380 0.249167711266311 0.243360557322165 0.242581309743049 0.257920644464698 0.250501188548063 0.246568961390978 0.245546496685400 0.266155499466010 0.255918538664415 5 5|0 -|/ 23037381 23037971 23037710.667 23036552 23039896 - gene protein_coding_gene TRUE TRUE AT5G56900.1|AT5G56900.2 CwfJ-like family protein / zinc finger (CCCH-type) family protein similar to CwfJ-like family protein [Arabidopsis thaliana] (TAIR:AT1G56290.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_783052.1); similar to Os09g0364000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062997.1); contains InterPro domain Protein similar to CwfJ, C-terminal 1; (InterPro:IPR006768); contains InterPro domain Protein similar to CwfJ, C-terminal 2; (InterPro:IPR006767); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to CwfJ-like family protein [Arabidopsis thaliana] (TAIR:AT1G56290.1); similar to PREDICTED: similar to CWF19-like 1, cell cycle control isoform 1 [Canis familiaris] (GB:XP_534991.2); similar to Os09g0364000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062997.1); contains InterPro domain Protein similar to CwfJ, C-terminal 1; (InterPro:IPR006768); contains InterPro domain Protein similar to CwfJ, C-terminal 2; (InterPro:IPR006767); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.42391448107676 13.0100024280576 7.60835691738441e-08 8.15930975180157e-06 16.3607787752502 12.6638104486821 1.42391448107676 0.122616668597472 AT5G51640_at 7.25155442293688 7.71251797380821 9.08878561362229 9.05408541546275 9.03995697232696 8.91856786698315 7.21610624045471 6.85658814808146 6.65368858717508 6.26694761612286 7.47366640788511 7.23006689914571 7.59372272648672 7.3451284564747 7.06743097991932 7.62557938477238 7.81275891318304 7.57437632594483 6.83887601535494 0.225257012224490 0.221556341195158 0.224492661686369 0.223686796498753 0.223137866515111 0.223318344916697 0.229598970183366 0.22636598694691 0.229013380641655 0.227652942019004 0.219759613647240 0.221774813171364 0.217809768064691 0.217468651661055 0.222087202358345 0.216402421134320 0.220910962478320 0.224852152066947 0.233926053681697 5 5 - 20992631 20993105 20992875.455 20992406 20994851 - gene protein_coding_gene TRUE TRUE AT5G51640.1 YLS7 (yellow-leaf-specific gene 7) Encodes leaf-senescence-related protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25360.2); similar to unknown [Gymnadenia conopsea] (GB:ABD66519.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 1.32249722981033 13.0028984858794 7.65005623275137e-08 8.15930975180157e-06 16.3562246509924 15.1681929990149 1.32249722981033 0.103497695666492 AT5G05750_at 7.74654836798064 7.99193251186416 8.70834734945738 8.82455375438997 9.56818456639727 9.24403890711193 7.37494468190593 7.46404535891524 6.62797778654634 6.72463968864628 8.23046813327086 7.45436641467201 7.82796787810106 7.56761579009264 7.41441141772378 7.64158366741061 7.68691226794768 7.55735292481223 6.83709101571927 0.249376961926933 0.228809768757456 0.251967873517366 0.241611797417165 0.235105083222476 0.239406893263171 0.238812503552402 0.234468810810746 0.249211776013514 0.24043037754705 0.229589494763060 0.238655479177347 0.235683939319871 0.246736230274588 0.241458361641266 0.227909702267499 0.257462562894778 0.245052334362381 0.243944768446644 5 5 + 1728063 1728455 1728291.273 1727430 1728934 + gene protein_coding_gene TRUE TRUE AT5G05750.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57340.2); similar to dnaJ-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89081.1); similar to Os01g0556400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043324.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.19229769781127 13.0020433815753 7.65509235635765e-08 8.15930975180157e-06 16.3556762470665 15.5665682582817 1.19229769781127 0.0747801713336208 AT5G08190_at 5.78565599166142 5.74686156587934 6.57351589955938 6.63362211149286 7.72003066195335 7.08036885643932 5.46710183310169 5.17657397222369 4.33415163093921 4.95630347161539 6.8098505398005 6.46298669492701 6.10560226413227 6.15405278098268 6.40261040411828 6.85281310852542 5.99385257934067 5.37104969092532 5.36605714158307 0.251918429694707 0.248922974734348 0.251951233238070 0.252642398639036 0.264340767810429 0.256282138850162 0.246677847641475 0.246958933226296 0.254948239002726 0.258957655230047 0.245293332948822 0.251522478156308 0.252806701861072 0.271710736398934 0.245577738704036 0.245293332948822 0.254358600679758 0.258617657212501 0.255883789892767 5 0|5 /|+ 2636616 2637078 2636841 2635903 2637434 + gene protein_coding_gene TRUE TRUE AT5G08190.1|AT5G08190.2 TATA-binding protein-associated phosphoprotein Dr1 protein, putative similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) [Arabidopsis thaliana] (TAIR:AT5G23090.1); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124)|similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) [Arabidopsis thaliana] (TAIR:AT5G23090.4); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 1.42071710905475 13.0013365768141 7.65925779794745e-08 8.15930975180157e-06 16.3552229160094 11.8502695311505 1.42071710905475 0.122207893832947 AT5G50460_at 9.88996429269178 10.2129711155454 10.9102088704186 11.0273180851782 10.3179939641385 10.1239859264448 8.83666138496809 9.1227885003454 8.54943911009647 8.43433653556407 10.1084035171160 10.3705024227271 9.6385362648285 9.79910430841186 10.4375762732025 9.67805665205721 9.29944040704236 9.570411907417 8.45268843411645 0.111241943459145 0.113399402123620 0.110306398199851 0.118779481184512 0.112186693681753 0.110899458137326 0.113932371695211 0.115499354194638 0.137252823776336 0.129033664460660 0.113794713679818 0.110306398199851 0.113757631318182 0.113037069086882 0.117178492879791 0.112923933316450 0.122400504598240 0.113984698666458 0.119770702027399 5 5 - 20569412 20569694 20569529.727 20568663 20569792 - gene protein_coding_gene TRUE TRUE AT5G50460.1 protein transport protein SEC61 gamma subunit, putative Identical to Protein transport protein SEC61 gamma-1 subunit (SEC61G2) [Arabidopsis Thaliana] (GB:Q9SW34); similar to protein transport protein SEC61 gamma subunit, putative [Arabidopsis thaliana] (TAIR:AT4G24920.1); similar to Os02g0178400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046076.1); similar to Protein transport protein SEC61 subunit gamma (GB:Q7Z1B8); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_797211.1); contains InterPro domain Protein secE/sec61-gamma protein; (InterPro:IPR001901); contains InterPro domain Protein translocase SEC61 complex gamma subunit; (InterPro:IPR008158); contains InterPro domain SEC61 complex gamma subunit; (InterPro:IPR008159) 1.23160649866602 12.9934657213849 7.70581061106384e-08 8.176933767719e-06 16.3501724939222 19.2260241819793 1.23160649866602 0.08434632131915 AT5G64260_at 7.48475385650556 7.71951997981678 8.03964636193033 7.94222871169077 8.4266149695395 8.48373118274052 4.91436688906787 5.81097421979969 6.6893246225432 5.4255964641408 8.27745536218254 7.68612253914347 8.26325429023044 7.75822682296748 7.62572505112694 7.46785591943535 6.84825619624142 7.60782454795393 6.27270206115773 0.162772906701568 0.160964214533868 0.165043100170428 0.164812006678771 0.164392354263110 0.172043947045502 0.169253057532555 0.168375466665614 0.170470632714849 0.175967088425764 0.162211400109052 0.159646002301942 0.159646002301942 0.171731767345252 0.161790419814115 0.161449438244229 0.171059270673437 0.165322885762922 0.171077915575148 5 5 + 25721575 25722073 25721857.182 25721155 25722542 + gene protein_coding_gene TRUE TRUE AT5G64260.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G09440.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 1.65164197269538 12.9906411538453 7.72259180897832e-08 8.176933767719e-06 16.3483590911363 14.2632534249401 1.65164197269538 0.161578971867445 AT5G23570_at 4.37794252306499 4.59462547668417 5.75383849920394 5.97167630423917 5.8705122606867 5.69458695944961 4.70904416866492 4.39470818014663 3.93416751689511 4.77357580187529 5.47037232543839 5.29315082853292 5.38143803824051 5.6678008401663 5.4865068879286 5.79626415212691 5.56962805826846 5.54303357466408 4.45655860641588 0.240364978971671 0.233263839474146 0.229998106274149 0.236278636066988 0.230787718107140 0.237567055038016 0.23473460880579 0.239393388055278 0.252268679460888 0.236605838730565 0.236016888586886 0.241408654656173 0.240162920574627 0.23539809144383 0.238328916335727 0.234671804712808 0.23380732867965 0.229998106274149 0.238940216044927 5 5 + 7945115 7945842 7945417.364 7943127 7946053 + gene protein_coding_gene TRUE TRUE AT5G23570.1 SGS3 (SUPPRESSOR OF GENE SILENCING 3) Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48670.2); similar to Emr1 [Triticum aestivum] (GB:AAP80862.1); similar to Os12g0197700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066361.1); similar to Os12g0197500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066360.1); contains InterPro domain Region of unknown function, putative Zinc finger, XS and XH; (InterPro:IPR005381) 1.22074855759834 12.9889966995315 7.73238009831643e-08 8.176933767719e-06 16.3473030933894 10.1279292864673 1.22074855759834 0.0819339613608752 AT5G45260_at 5.70085706559133 6.07060286876858 6.78960069123346 6.79388688509382 7.55734814315678 7.08861696943243 5.36514433323302 5.17080533944874 5.68172324011529 5.4469911196783 6.81699897385537 6.76226138085363 6.4221012919718 7.05790949483221 6.03165536472072 6.83497250347968 6.83649428723818 6.09996199325612 5.06680592847253 0.158599968028183 0.158119673052079 0.15437125921742 0.155908680882107 0.154957166579064 0.161144796598024 0.155704922891924 0.158451205028917 0.166507310264572 0.158741865922175 0.154404958251755 0.15459671042452 0.15482022264796 0.157368584288784 0.153450636693659 0.154940061877787 0.162397412192188 0.155891525111676 0.162517232680033 5 5 + 18346942 18349663 18348186 18343430 18349836 + gene protein_coding_gene TRUE TRUE AT5G45260.1|AT5G45260.2 SLH1 (sensitive to low humidity 1); transcription factor|SLH1 (sensitive to low humidity 1) identical to R gene RRS1-R conferring resistance to Ralstonia solanacearum. Single amino acid insertion in the WRKY C-terminal domain that impairs DNA binding activity results in constitutive activation of defense responses which are suppressed under conditions of high humidity. Identical to Probable WRKY transcription factor 52 (WRKY DNA-binding protein 52) (Disease resistance protein RRS1) (Resistance to Ralstonia solanacearum 1 protein) (Disease resistance protein SLH1) (SENSITIVE TO LOW HUMIDITY 1 protein) (WRKY52) [Arabidopsis Thaliana] (GB:Q9FH83;GB:Q689Y9;GB:Q8GZ83;GB:Q9FH84); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657); contains InterPro domain ValRS-IleRS-LeuRS editing; (InterPro:IPR009008); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable WRKY transcription factor 52 (WRKY DNA-binding protein 52) (Disease resistance protein RRS1) (Resistance to Ralstonia solanacearum 1 protein) (Disease resistance protein SLH1) (SENSITIVE TO LOW HUMIDITY 1 protein) (WRKY52) [Arabidopsis Thaliana] (GB:Q9FH83;GB:Q689Y9;GB:Q8GZ83;GB:Q9FH84); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.34489920949465 12.9665162108822 7.86755445835999e-08 8.29963662012977e-06 16.332849333465 12.3202583740104 1.34489920949465 0.108653923241524 AT5G55970_at 5.76496136384517 5.8613623464653 6.92474652220058 6.81070882807938 8.05687046586314 7.31966465405217 4.72853911892275 5.38447411107859 3.7495024756974 4.78884924779241 5.12640326514778 5.39069422415997 7.02587759950177 6.38084366636202 4.57556360649788 7.3668861693343 7.32151071601017 5.46520585043484 4.92874909318913 0.276386563754011 0.260985759154149 0.267129828447177 0.274554296057984 0.277963139267423 0.282114064498027 0.273549387190310 0.264506826443050 0.281247352637659 0.271382282654681 0.261489438949031 0.262481508848850 0.264173622789082 0.260985759154149 0.269924595443526 0.269026760951283 0.2698884032123 0.260985759154149 0.27590617324833 5 5|0 +|/ 22685705 22686436 22686028.2 22684612 22686771 + gene protein_coding_gene TRUE TRUE AT5G55970.1|AT5G55970.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G26580.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89318.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.71787645704616 12.9594788984861 7.91039683022156e-08 8.32457742736307e-06 16.3283179048539 11.6417442976838 1.71787645704616 0.172710016947807 AT5G64610_at 7.28421974794571 7.5705560772134 8.1781788119946 8.20209601408554 8.88203561354196 8.75162803680696 6.99181938702458 7.33397295604428 6.62427073468121 6.13803561574068 7.8319202502916 7.782549899648 7.54056117990698 7.47858670252614 7.31420397065282 7.9009691915482 7.54110954613903 7.32472254108529 6.3655031870971 0.226370696654363 0.226191020901719 0.231468870198057 0.243233350239404 0.234183634397655 0.230103265030686 0.240341179190076 0.226191020901719 0.232468835225253 0.250688508975899 0.230910254892193 0.226191020901719 0.226191020901719 0.233067726335136 0.230553928897822 0.228518955531787 0.230555369439994 0.236034886876697 0.23814150951127 5 5|0 -|/ 25845628 25846378 25846012.889 25845386 25847750 - gene protein_coding_gene TRUE TRUE AT5G64610.1 histone acetyltransferase, putative Identical to Probable MYST-like histone acetyltransferase 1 (EC 2.3.1.48) (HAG4) [Arabidopsis Thaliana] (GB:Q9FLF7); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G09740.1); similar to histone acetyltransferase protein HAC108 [Zea mays] (GB:AAM89290.1); similar to MYST-type acetyltransferase [Solanum chacoense] (GB:AAQ24535.1); similar to 181 [Daucus carota] (GB:BAA32822.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.21086698738435 12.9464492992430 7.99039184446642e-08 8.38840070598014e-06 16.3199193670998 14.8819455419477 1.21086698738435 0.080546810585771 AT5G45010_at 8.74244218473457 8.63012813353903 9.64543402674585 9.54291844673173 9.22353867161373 9.2852982974778 8.03859310641904 8.24692974609804 7.99676639946472 7.59097574231789 8.95281072809374 8.9884527477126 8.81107783271343 8.87898236963194 8.78279308060536 9.10403589582143 8.9270161114631 8.71384180221319 7.59493439807935 0.123510198931524 0.123510198931524 0.128943018542654 0.132621583041955 0.125324496577261 0.130197574877589 0.130889370934701 0.123510198931524 0.131637221671462 0.146128182405246 0.130093993056039 0.127530515088144 0.126821491751841 0.127708710254419 0.130890757314447 0.128232671556701 0.127526238373964 0.129214552980041 0.134631747367429 5 5 - 18184681 18185418 18185089 18184471 18185601 - gene protein_coding_gene TRUE TRUE AT5G45010.1 ATDSS1(V) (ARABIDOPSIS DSS1 HOMOLOG ON CHROMOSOME V) Identical to Probable 26 proteasome complex subunit sem1-2 [Arabidopsis Thaliana] (GB:Q9FL96;GB:Q8LD17); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.2); similar to Os01g0316800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042880.1); similar to Os01g0273000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042712.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAA90391.1); contains InterPro domain DSS1/SEM1; (InterPro:IPR007834) 1.08854577117790 12.9265065298642 8.11454150573552e-08 8.49815772444737e-06 16.3070431473190 17.2306279104962 1.08854577117790 0.0458977695594304 AT5G19910_at 4.6143458063051 4.72291468409363 6.26121048031677 6.28409057467344 6.65185495956474 7.49671700435674 4.76163975588296 4.99114204846925 4.22120158531854 3.8686399502809 5.57919533019517 4.911439938998 5.4074381166358 5.80876343869714 4.89177635412302 5.91295435955224 5.40677285574312 5.54467088550154 4.38385976937894 0.206021556374186 0.199637502001326 0.202300821120678 0.198315861354445 0.195409683786066 0.210898248192479 0.195409683786066 0.201524749890783 0.202838808954626 0.214830422234243 0.197045052934095 0.201327552733155 0.199881013903543 0.204635210941728 0.195409683786066 0.195409683786066 0.197827952635306 0.200634382486699 0.199067458715062 5 5|0 -|/ 6731347 6732610 6731987.111 6731187 6732894 - gene protein_coding_gene TRUE TRUE AT5G19910.1 SOH1 family protein Identical to Probable mediator complex subunit SOH1 [Arabidopsis Thaliana] (GB:Q8VYB1); similar to Os10g0564100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065408.1); similar to Os07g0164600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058961.1); similar to hypothetical protein DDBDRAFT_0186404 [Dictyostelium discoideum AX4] (GB:XP_638330.1); contains InterPro domain SOH1; (InterPro:IPR008831) 1.58796682798907 12.9175907289706 8.17072320963751e-08 8.53637616109794e-06 16.3012781040556 10.5183778366696 1.58796682798907 0.152717566670668 AT5G56950_at 3.94109336353856 3.77774916153437 4.59029070302834 4.56585910526674 4.57894908610104 4.33746045901266 4.01278777738371 4.06688250108611 3.70329947740464 3.65157685120500 5.48844093234182 5.85346794364998 5.51712338913461 5.36281111067486 6.13617406415678 5.23402630686266 4.65217389533864 4.79695750972725 3.87299247393545 0.245480819763266 0.241454324462016 0.243160476381109 0.239118708159125 0.245816730750141 0.244610602806233 0.252890199590057 0.244981670891185 0.253630492121841 0.251691849224597 0.242127996577231 0.252062787844908 0.246276771615765 0.244393099519311 0.250673654637946 0.242172743122129 0.253541743276264 0.239827438230901 0.252889299202902 5 5|0 +|/ 23051118 23052496 23051774.625 23049675 23052887 + gene protein_coding_gene TRUE TRUE AT5G56950.1 NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN1;3); DNA binding similar to NAP1,1 (NUCLEOSOME ASSEMBLY PROTEIN1,1), DNA binding [Arabidopsis thaliana] (TAIR:AT4G26110.1); similar to nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 (GB:AAA50234.1); contains InterPro domain Nucleosome assembly protein (NAP); (InterPro:IPR002164) 1.10301779863532 12.9123248684416 8.20410420078236e-08 8.55064703630387e-06 16.2978706827879 8.7952689337027 1.10301779863532 0.0514881184614008 AT5G65910_at 8.08000628450122 8.25736768538858 9.0978868522973 9.37383970441325 9.78327231179995 9.4488465701343 8.037268399863 8.09495075466465 7.83565223980561 8.24620892793035 9.50774965525874 8.93753639751127 9.20190432552478 9.37869092854993 8.96605963631856 9.19812593291025 8.99317338543235 9.19579873679099 8.0948235541366 0.154041815516975 0.155734788751347 0.160737262322471 0.154765540591268 0.154482444009717 0.158469793477158 0.165234403914693 0.162235507800576 0.165955465644847 0.171846836558642 0.154206380440849 0.154899633924085 0.158722830795962 0.158073582993600 0.154679282398803 0.153855838114386 0.179704425923014 0.153840144331735 0.160726939061848 5 0|5 /|- 26378874 26379305 26379113 26378666 26380686 - gene protein_coding_gene TRUE TRUE AT5G65910.1 BSD domain-containing protein similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49800.1); similar to Os01g0766600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044357.1); similar to putative BSD protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53348.1); contains InterPro domain BSD; (InterPro:IPR005607) 1.21102402302654 12.8969930297768 8.30214340742187e-08 8.63207725094772e-06 16.2879393547274 17.3873172114218 1.21102402302654 0.081680128291884 AT5G05960_at 4.74558127044353 5.79001649219554 8.47512196882811 8.75610469597543 8.5558318652009 8.18034529023327 7.71720424536724 8.06574718911018 7.11717019854748 9.06757662130393 10.5149531632717 10.5039995766907 10.5769378739236 10.7100873185139 10.8935398044073 10.5086100038991 10.6110276076133 10.2600752340586 9.66893893537143 0.213854780095345 0.203915641806789 0.190080923705619 0.181334425486360 0.181095022181454 0.196748143448168 0.191914442137098 0.192873547833226 0.209326381618045 0.182521407581735 0.180573455877429 0.182028685610021 0.179967431138501 0.183920365740721 0.181018922739564 0.183478487480834 0.186717468947424 0.184915317727997 0.179340239671985 5 5|0 +|/ 1790260 1790546 1790428.3 1790232 1790834 + gene protein_coding_gene TRUE TRUE AT5G05960.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G53980.2); similar to hypothetical protein [Plantago major] (GB:CAH59408.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.93336111341831 12.8860687567045 8.37277671464366e-08 8.68469098541182e-06 16.2808535732176 17.1308936644384 1.93336111341831 0.207107363433650 AT5G13030_at 9.21126783756542 9.18325485825956 9.96734611117875 9.98412026015645 9.67575469192655 9.54260585883753 9.14730804992734 9.2731121787215 7.72279400154685 7.3815667296243 8.56062968521771 8.56295781057685 9.12835408593325 8.93715652472847 8.99838917630982 8.91086793134411 9.03532200951573 8.90838976047218 6.98533085953828 0.155709831708489 0.154580234481916 0.158078408657489 0.156204964957651 0.154543973792427 0.159543994093603 0.154240601891439 0.153103960792319 0.176475159773646 0.171904911039994 0.155701142149333 0.150172807754208 0.151466812024919 0.156360594509577 0.154384764177162 0.152041009797113 0.156011965641634 0.154162895972476 0.176723349410662 5 5|0 +|/ 4133527 4136412 4135123.19 4133219 4136691 + gene protein_coding_gene TRUE TRUE AT5G13030.1 similar to Os06g0320700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057514.1); similar to hypothetical protein ebA6654 [Azoarcus sp. EbN1] (GB:YP_160826.1); contains InterPro domain Protein of unknown function UPF0061; (InterPro:IPR003846) 1.05287442109107 12.8754354109809 8.4421579191874e-08 8.73575793222792e-06 16.2739488980202 17.619840682446 1.05287442109107 0.03219997658953 AT5G23090_at 6.11830315715236 6.29770305917356 7.5222731600479 7.11391793841658 7.90767274401981 7.88344716808727 5.69023802705885 5.55624093225483 5.76296217696019 5.67073921850013 6.51849495752151 6.45237166732493 6.34779511854153 6.34179496042951 6.10114918171278 6.92292772129191 6.71492250251872 6.1677481307404 5.75319156271625 0.213840761764848 0.225063641489791 0.219419157929191 0.230354013272729 0.237737638196138 0.225555463053624 0.221809908398994 0.214064626244780 0.229178310238102 0.230703487186878 0.2232217921787 0.218246071920592 0.232500072475572 0.229191721025924 0.222387749692251 0.218952627434169 0.223910345096241 0.217665635654948 0.226212805993233 5 5|0 +|/ 7749415 7750180 7749946.444 7749073 7750547 + gene protein_coding_gene TRUE TRUE AT5G23090.1|AT5G23090.2|AT5G23090.3|AT5G23090.4 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) Identical to Dr1 protein homolog (DR1) [Arabidopsis Thaliana] (GB:P49592); similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G08190.1); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124)|Identical to Dr1 protein homolog (DR1) [Arabidopsis Thaliana] (GB:P49592); similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G08190.2); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 1.20407133467548 12.8667597679609 8.49922924702279e-08 8.77387404402414e-06 16.2683098819714 12.8486569479776 1.20407133467548 0.0807036879574661 AT5G15630_at 0.957408674293382 1.26527329437328 3.15922519492389 3.50933617952647 2.40667978968719 2.36302645439007 1.73320499791729 1.46086765499487 1.04555420285783 1.48326607033182 1.96831340615856 2.37169555889065 2.11282093491674 2.22550778436491 2.36892109303707 2.06295668320596 4.91920843761024 1.84025545754735 1.87406916312647 0.250076878753953 0.24402159624242 0.258488595659652 0.265578994760289 0.250420331523807 0.260623641559234 0.248842536744298 0.244522736293232 0.261845129933142 0.255132234171254 0.244290104997668 0.248155722764944 0.24402159624242 0.24873366720294 0.246584926678697 0.250214322913858 0.266454571157641 0.247973627202912 0.24402159624242 5 5|0 +|/ 5085784 5086521 5086206.778 5084707 5086795 + gene protein_coding_gene TRUE TRUE AT5G15630.1 COBL4/IRX6 (COBRA-LIKE4); hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. Identical to COBRA-like protein 4 precursor (COBL4) [Arabidopsis Thaliana] (GB:Q9LFW3;GB:Q6ICX3); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 [Arabidopsis thaliana] (TAIR:AT3G29810.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96834.1); similar to brittle stalk-2 [Zea mays] (GB:ABJ99754.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13305.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cytokine, IL-1 related; (InterPro:IPR008996); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) 1.26072917829913 12.8558184827363 8.5718045951173e-08 8.82777608343653e-06 16.2611911066388 4.08254764579921 1.26072917829913 0.0937425417935116 AT5G60170_at 7.46352555796522 7.49268098282102 8.72163811631676 8.64768524714045 8.83551217014914 8.50206553076068 7.90807964901824 7.64456302025158 6.22633014835489 7.15536939061978 8.11708600534657 8.24264198385998 8.16261775431157 8.44464836670869 7.90095000701579 8.54044618066865 8.46770566967261 7.86658666802686 7.352140496367 0.159669206615153 0.153862679093231 0.145322319750802 0.146206998186311 0.152397072733123 0.156722831074447 0.145089224911174 0.150433775085819 0.168625699845472 0.166873689169844 0.156675672668861 0.15128580300029 0.155808730191359 0.152958214792817 0.156015600098153 0.157527948552223 0.162156032030869 0.151680469835958 0.147565165709951 5 5 + 24249049 24249575 24249311.545 24244643 24250099 + gene protein_coding_gene TRUE TRUE AT5G60170.1 RNA binding similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G45630.1); similar to RNA-binding re (GB:ABE87889.1); contains InterPro domain RNA recognition, region 1; (InterPro:IPR003954); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.17803414062426 12.8445958958633 8.64694759482803e-08 8.88406072367549e-06 16.2538810314727 15.7165264549188 1.17803414062426 0.0748242300930047 AT5G20250_at 10.6642354481217 10.8250598481604 11.5939834885401 11.5780257950563 12.3702246335951 12.2518862639179 9.46196290621966 9.4496528871906 11.8237061419645 11.1759674084808 11.8794324148585 10.9847092936348 11.4858156061847 11.8736880944505 11.1539514637671 12.1163591876608 11.3796462932122 11.835827391785 10.9959967906816 0.0868607135491519 0.0847438712148995 0.0913692660376826 0.0926192399831087 0.0888328523374396 0.0975361773797136 0.0876406621039508 0.0858458893360105 0.0931979164264545 0.0848279779204614 0.0907428689799759 0.0858904996656003 0.0869645216681557 0.0874032834859074 0.0860708508705204 0.0846872823150916 0.0919862607485389 0.0846872823150916 0.0881608730392483 5 5 + 6836098 6836556 6836320.636 6833672 6836790 + gene protein_coding_gene TRUE TRUE AT5G20250.1|AT5G20250.2|AT5G20250.3 DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. similar to ATSIP2 (ARABIDOPSIS THALIANA SEED IMBIBITION 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57520.1); similar to ATSIP1 (ARABIDOPSIS THALIANA SEED IMBIBITION 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G55740.1); similar to putative alkaline alpha-galactosidase seed imbibition protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10122.1); similar to putative imbibition protein [Brassica oleracea] (GB:CAA55893.1); similar to alkaline alpha galactosidase 2 [Zea mays] (GB:AAQ07252.2); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111); contains InterPro domain Raffinose synthase; (InterPro:IPR008811) 1.05254543866974 12.8102524016497 8.88139292636592e-08 9.10336297089602e-06 16.2314584646592 22.4846633248018 1.05254543866974 0.0347295496726207 AT5G62910_at 6.59840956317448 6.74636690147343 7.14288982878047 7.38409503256214 7.64616655648055 7.62180898382897 5.9450618111037 6.03717487238921 6.19706240482361 5.83754925219935 7.19021881182332 6.99330276382989 6.882437769924 7.10506531826668 7.16284308346016 7.14783479767695 6.9426158436148 7.1083913424808 5.9525154996649 0.156077453360313 0.148552002865062 0.147871999102986 0.152627242717316 0.155703101619049 0.162215177176995 0.155017580003023 0.152471511753809 0.155174391117197 0.156389323045169 0.149382227333855 0.147807598963326 0.156999273959868 0.158639548823114 0.145002663177113 0.146927655695872 0.158586827326566 0.148531637358887 0.156137718776237 5 5 + 25268699 25269195 25268967.818 25267886 25269430 + gene protein_coding_gene TRUE TRUE AT5G62910.1 protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G48070.2); similar to hypothetical protein LES1_20t00015 [Lycopersicon esculentum] (GB:ABI34275.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.09393323876656 12.7997415879114 8.95452147094488e-08 9.15667221647322e-06 16.2245802866518 13.4213955780310 1.09393323876656 0.0516704920744376 AT5G24280_at 1.92486750047041 1.31295622129732 3.22495771606095 3.36371230347355 3.2347468865353 3.46385999538226 1.75056023834916 1.42568077468045 1.66080471194105 2.10623515811555 3.17134371462334 2.66406156255106 2.92292223965556 2.99852313881697 2.80006751113336 3.41592319903173 3.54982201161761 3.05059530385199 2.01149763193488 0.229040157820800 0.227869371184963 0.228351231024184 0.228710178361094 0.221867239312546 0.222185459752663 0.225985791441865 0.226354868798383 0.244479209599757 0.227820952256516 0.221007396829114 0.221077084003769 0.229661552299062 0.229557941806078 0.227196587680181 0.219410475983001 0.224156413731580 0.219035318971444 0.226746066780698 5 5|0 -|/ 8251442 8252174 8251889.6 8251381 8261431 - gene protein_coding_gene TRUE TRUE AT5G24280.1 ATP binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49250.1); similar to unnamed protein product; emb|CAB66404.1 gene_id:MOP9.10 similar to unknown protein-related [Medicago truncatula] (GB:ABE86966.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 1.43189060474669 12.7860564377910 9.05071965091926e-08 9.23326552675563e-06 16.2156137565284 4.96158595577652 1.43189060474669 0.128542195914947 AT5G20580_at 5.60184826227505 5.40898238657548 6.09074088714094 6.15911241834962 6.71874050373482 6.28466657812152 5.30625382440340 5.14489372029829 4.40376044884770 4.58065270549564 6.04082902821971 6.29225280430952 5.79780007581124 6.53603014038859 6.09798238085746 6.53307613867904 5.83024104204333 5.90583873976651 4.89144094892117 0.222881754940890 0.224253705598701 0.219365230210983 0.218942150057462 0.215579517050444 0.222458881806923 0.219809112905543 0.226089225528567 0.224809735339370 0.222664516837836 0.220689700828691 0.219575828331991 0.217447595236683 0.219371039929332 0.220280679874342 0.215579517050444 0.229019264663640 0.219716856743284 0.235842193668929 5 5|0 -|/ 6958803 6960019 6959452.625 6958599 6962806 - gene protein_coding_gene TRUE TRUE AT5G20580.1|AT5G20580.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06005.1); similar to Os02g0778300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048294.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16977.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 1.22589607055996 12.7829039808603 9.07303859712743e-08 9.23430684768478e-06 16.2135464814166 11.2166753200362 1.22589607055996 0.0876157781109087 AT5G36890_at 7.06936032415036 7.23346624266506 7.46952537595731 7.22348930788416 7.7848504643307 7.4258142149193 5.64880061387908 5.00631428011493 5.01770089271919 5.52878240587388 6.56622271132417 7.07448151928983 6.9680916514676 7.06275112483132 7.09769202487438 6.28943871480868 7.21919975648584 6.83250017289775 4.9512993501784 0.214305707784529 0.217342646115832 0.220165441412761 0.220035921362333 0.224519367321826 0.215858983514936 0.229849959102836 0.221320847699713 0.21850499416795 0.236167470060626 0.213348587633868 0.217357808863089 0.213348587633868 0.218197622284249 0.217372065251388 0.217553104106769 0.224791604702007 0.213497269357584 0.230193130655283 5 5|0 -|/ 14559446 14560421 14559950 14558580 14563460 - gene protein_coding_gene TRUE TRUE AT5G36890.1|AT5G36890.2 glycosyl hydrolase family 1 protein|hydrolase, hydrolyzing O-glycosyl compounds similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G26560.1); similar to latex cyanogenic beta glucosidase [Hevea brasiliensis] (GB:AAP51059.1); similar to Os01g0897600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045089.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 1.47965206773874 12.7736383223159 9.13898582555616e-08 9.27964305202739e-06 16.2074665100433 12.8850649825316 1.47965206773874 0.137266302278446 AT5G39670_at 7.23346801045476 7.98211493472376 10.0357705405231 10.2675096416134 8.73020561700723 7.60636523072088 1.48648230940552 2.08319430288542 3.07534786355449 2.87053207270539 2.16482922553734 2.17179935724403 2.30978582112486 3.46330130181743 2.56869423326130 3.32722953629632 3.02943684453206 2.7684572800411 2.00911280018929 0.289323245909349 0.286523350376862 0.287688501296792 0.283365131974350 0.285485257924193 0.302669878580106 0.281362658132494 0.279165789600342 0.285727652255935 0.284177475594919 0.282750279104596 0.279896466639093 0.27973421446306 0.288832218881217 0.288755333189362 0.283778726563943 0.287801563915333 0.27843431765683 0.27843431765683 5 5 + 15900545 15900973 15900702.545 15900407 15901295 + gene protein_coding_gene TRUE TRUE AT5G39670.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G29000.1); similar to Calcium-binding EF-hand [Medicago truncatula] (GB:ABE80363.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 2.26871266129877 12.7667625694220 9.18826053752434e-08 9.30787783745854e-06 16.2029510245384 9.61669179614919 2.26871266129877 0.258614411535249 AT5G57100_at 3.79463349005100 3.56870317955113 4.43875845701845 4.59560245683665 5.1576109791196 4.9430433420611 3.85651732648271 3.78185940117685 3.59124189152018 3.46304055572819 4.72470614254405 5.32268131805032 4.45199213668226 4.92504629607927 5.24507767602688 4.54938127863092 4.92470885232541 4.46052985020353 3.78809787240556 0.240113948787058 0.237266126643855 0.235385787789788 0.237910322784385 0.2310314876744 0.250034321870762 0.238274192183284 0.238949658729674 0.250252108704304 0.238738161355525 0.238609137592377 0.2310314876744 0.2310314876744 0.242317539620759 0.239305695823627 0.2310314876744 0.237363493321169 0.244320379776386 0.243231569582800 5 5|0 -|/ 23123792 23124567 23124150.3 23123528 23126021 - gene protein_coding_gene TRUE TRUE AT5G57100.1 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT5G55950.1); similar to glucose-6-phosphate/phosphate-tranlocator-like [Oryza sativa (japonica cultivar-group)] (GB:BAD13039.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 1.12235706502169 12.7608531871960 9.23084101748198e-08 9.32921541878383e-06 16.1990676378194 8.48691218755509 1.12235706502169 0.0617341126429053 AT5G59540_at 10.3159320646449 10.5082359506369 11.3532796771277 11.5079646725493 11.6395672916603 11.4930632619599 10.7181567771904 10.8390855745737 10.0495940968113 10.071918501031 11.1868111689291 11.0323136818151 11.4647453652557 11.3543915139937 10.9268912940070 11.4991688077714 11.6468923619332 11.3529381720251 9.93123041499681 0.0953385236762337 0.0895057633570507 0.0917594285679891 0.0955064669343664 0.0977346410829928 0.094632051416852 0.0915043479053715 0.0924587293709145 0.0992393278616457 0.096575583844739 0.0913685595522516 0.0933038184968168 0.092499635387123 0.0965936665933684 0.0944499654901556 0.0918206386334942 0.0954076959499374 0.0922266422875027 0.103358997769783 5 5 - 24013526 24014125 24013907.364 24013299 24014816 - gene protein_coding_gene TRUE TRUE AT5G59540.1|AT5G59540.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein|oxidoreductase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G59530.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding; (InterPro:IPR000194); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123)|similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G59530.1); similar to H+-transporting two-sector ATPase, alpha/beta subunit, central re (GB:ABE93406.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding; (InterPro:IPR000194); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.09677708774970 12.7556888799450 9.26822878384852e-08 9.34521790723221e-06 16.1956719561553 21.7097106837909 1.09677708774970 0.0538963010628089 AT5G19130_at 5.6806454628329 6.03725179213401 6.77690139514122 6.9838555530146 6.7906354832866 6.66079185257499 5.58064796029598 5.50106137766154 5.15953560662144 5.005342515619 6.52990676889759 6.24045802890976 6.54198903128191 6.30118393670111 6.26998255705765 6.33905629295932 5.99566881550858 6.04989378411956 4.95488824001923 0.212107168938233 0.201825775564381 0.205645324445431 0.205952786157646 0.203992721704143 0.201278005708276 0.204081695727638 0.206743054371145 0.221028855985785 0.200964026088325 0.207037669942587 0.20053547378224 0.206958376375293 0.208640750111302 0.202071311443718 0.204524910154144 0.224365676889648 0.214255044774330 0.206147569271850 5 5 - 6416167 6416696 6416461.909 6415922 6419037 - gene protein_coding_gene TRUE TRUE AT5G19130.1|AT5G19130.2 GPI transamidase component family protein / Gaa1-like family protein similar to glycosylphosphatidylinositol anchor attachment 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAC01259.1); contains InterPro domain Gaa1-like, GPI transamidase component; (InterPro:IPR007246) 1.17336985197473 12.7403090963451 9.3805532178202e-08 9.43652997684367e-06 16.185548652335 11.9131936209591 1.17336985197473 0.0760636749515631 AT5G64000_at 6.78796364869744 7.20883284864275 8.95744706557289 9.05594758276815 7.65065129794371 7.13186884107867 2.59881891779157 2.46291722653957 4.59153014638224 2.48547826132917 2.45775527504491 2.35765730033158 2.69294609090500 2.60406497157803 2.30038411565828 3.37339546269801 2.22971671721448 2.88040792065781 2.81875537746173 0.337980030532727 0.329649194054176 0.338295852903769 0.329740429183591 0.3319251866803 0.318899812783274 0.314790936038101 0.314309328017641 0.325968595325766 0.319029408126682 0.319268516144649 0.314309328017641 0.314968902442334 0.314309328017641 0.320689221533699 0.314309328017641 0.321236429125505 0.315611919004909 0.320587605857310 5 5 + 25634755 25635615 25635105.545 25633864 25635857 + gene protein_coding_gene TRUE TRUE AT5G64000.1 SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase 3'(2'),5'-bisphosphate nucleotidase Identical to SAL2 phosphatase (3'(2'),5'-bisphosphate nucleotidase 2) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 2) (DPNPase 2) (Inositol-1,4-bisphosphate 1-phosphatase 2) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 2) (IPPase 2) (SAL2) [Arabidopsis Thaliana] (GB:O49623); similar to 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G09290.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 1.37389929489649 12.7199975029853 9.53117400414155e-08 9.56585500635509e-06 16.1721546467882 9.43712038370537 1.37389929489649 0.119199085476774 AT5G48655_at 9.10082987324346 9.12119021643866 10.0793601908321 10.1053229444351 10.0778962460718 10.0882247569961 8.90158785167378 9.11645453729257 8.05674232579976 8.33906773421948 9.33432808176234 9.12767367357264 9.33548521280504 9.32081004305177 9.33191558221926 9.31494874985843 9.48531360793631 9.23281204280378 8.33211654119576 0.0916809896626358 0.0926412477869537 0.0930995015549898 0.0936305192358594 0.0934924884832952 0.0943050594409056 0.0980615326563736 0.0936721573233615 0.128507481164227 0.101174808398698 0.0964842971027118 0.0938091821409589 0.09755502412122 0.0934376288252852 0.0920216117131061 0.0942746564216675 0.100766837932562 0.098351941622209 0.103548539187854 5 5 - 19748909 19749634 19749309.545 19748376 19750269 - gene protein_coding_gene TRUE TRUE AT5G48655.1|AT5G48655.2|AT5G48655.3 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G07200.2); similar to Os01g0919500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045211.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08744.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.04772704438393 12.6764868925259 9.8627669393836e-08 9.87531773274112e-06 16.1433685108113 18.3503848644510 1.04772704438393 0.0376619508851475 AT5G49890_at 6.47453661276561 6.56710084573028 7.65575231880552 8.07661605531257 8.10009252336034 7.40488613396766 6.84626282678353 6.64136090136607 4.71823863530886 6.01388903294553 7.50036233271346 7.23059818674702 7.07219930864123 7.34861622832003 7.28788871895118 7.70162535315035 7.37256871578933 7.17109715887554 5.69838542016449 0.203034635263947 0.191133472538401 0.195003760811281 0.197243115963928 0.205393097895208 0.193006738472603 0.193447358960574 0.193388438835152 0.229159778901039 0.200399189152215 0.191133472538401 0.191578098287298 0.193624090507555 0.206961567023187 0.197086312866276 0.191822318459133 0.210267541072679 0.197535805421173 0.202616581058629 5 5|0 -|/ 20305737 20306336 20306037.1 20305345 20309576 - gene protein_coding_gene TRUE TRUE AT5G49890.1 CLC-C (chloride channel C); anion channel/ voltage-gated chloride channel member of Anion channel protein family Identical to Chloride channel protein CLC-c (AtCLC-c) (CLC-C) [Arabidopsis Thaliana] (GB:Q96282;GB:O04753;GB:O04837); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:AT5G33280.1); similar to ATCLC-A (CHLORIDE CHANNEL A), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to chloride channel [Oryza sativa (japonica cultivar-group)] (GB:BAB97267.1); similar to chloride channel Stclc1 [Solanum tuberosum] (GB:CAA71369.1); similar to C1C-Nt1 [Nicotiana tabacum] (GB:CAA64829.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) 1.51790163272952 12.6736179770205 9.88506808271539e-08 9.87531773274112e-06 16.1414659475548 13.6270546255305 1.51790163272952 0.145920195846576 AT5G45610_at 6.1206375880019 5.94277666243523 7.48659102537459 6.90964482222144 7.80719939863144 7.45793393564536 6.12181026207381 5.70824739402511 4.14144540004206 5.19044922321044 6.12247790655025 6.11831212743096 6.47231700397601 6.41508370569205 6.06225278015593 6.36769750885361 7.3139604421276 5.94651770890844 5.15733275279661 0.190974145201191 0.190030532719516 0.189431274911259 0.189803325921973 0.189661354202651 0.189947823689825 0.186447795698313 0.186000272033833 0.196687698101390 0.199446849654867 0.187677455643648 0.188709494235364 0.1896004755324 0.189843753967949 0.195029450553051 0.187932405660101 0.190369846623673 0.192494783657574 0.200041034928334 5 5 - 18513665 18514349 18513978.091 18513538 18516900 - gene protein_coding_gene TRUE TRUE AT5G45610.1 binding contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 1.48227962905651 12.6459054958589 1.01033366642136e-07 1.00611911280696e-05 16.1230591269158 12.2853900643736 1.48227962905651 0.140326103236817 AT5G06910_at 5.43920203834109 5.55062032394796 6.98179420324862 7.19451493369482 7.29009673151084 6.54386278611493 6.00353452120518 5.82792593594684 3.87239665884965 4.84174029834397 6.36203154689762 5.92384576467419 6.15069236365156 6.40629317033618 5.91287600149865 6.57931435941508 6.04795194336538 5.14339133225148 4.52802051576342 0.24049962634011 0.233913037559874 0.248907538276412 0.235676888088627 0.240292680622305 0.274868625150548 0.241224107839038 0.236454880939168 0.261071284066172 0.238191415162620 0.23473421602027 0.233976037342779 0.237725108737335 0.236570687543436 0.233124600369430 0.233124600369430 0.260212061178866 0.244204488203862 0.240928596786893 5 5|0 +|/ 2141398 2142430 2141971 2140454 2142680 + gene protein_coding_gene TRUE TRUE AT5G06910.1 ATJ6 (ARABIDOPSIS J-DOMAIN PROTEIN 6); heat shock protein binding / unfolded protein binding DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain. Identical to Chaperone protein dnaJ 6 (AtJ6) (AtDjC6) (ATJ6) [Arabidopsis Thaliana] (GB:Q9FL54;GB:O49070); similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G12170.1); similar to Heat shock protein DnaJ [Medicago truncatula] (GB:ABE93759.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.47449676402881 12.6429800638590 1.01266823676054e-07 1.00611911280696e-05 16.1211129758215 11.5938699598748 1.47449676402881 0.139023076154019 AT5G10700_at 4.13111389804879 4.45424713753577 5.18165999424536 5.04763056034917 5.21818326217323 5.67695571269737 3.17905221361014 3.81573935212963 4.20514734624177 3.80171594363350 5.51037652262662 5.48498270670756 5.65632028544567 5.63194955330721 5.97343337191982 5.74676012164738 5.41289149106756 5.22604434687723 3.71115038167527 0.2100223314969 0.2100223314969 0.2100223314969 0.216303919130437 0.2100223314969 0.213882356267659 0.216542297256037 0.215512289776111 0.231855248617199 0.228032567369180 0.213772791345383 0.214730594365479 0.218099139285481 0.220432321244932 0.213774707858073 0.2100223314969 0.210514598988954 0.21665275129944 0.224026833012238 5 5 - 3378260 3378822 3378627 3378054 3378868 - gene protein_coding_gene TRUE TRUE AT5G10700.1 protein tyrosine phosphatase similar to hypothetical protein LOC563207 [Danio rerio] (GB:NP_001025446.1); similar to Os04g0605200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053793.1); contains InterPro domain Low molecular weight phosphotyrosine protein phosphatase; (InterPro:IPR000106) 1.53020473740078 12.6412219190157 1.01407410707176e-07 1.00611911280696e-05 16.1199430840582 9.33124744491538 1.53020473740078 0.148688266367573 AT5G04910_at 6.33612449681025 6.39255026222111 7.35429019484072 7.46873412830867 7.95622134113967 7.80980139058259 5.39729530174828 5.65003173786824 5.75598814647607 5.80649301849302 6.50004103497304 5.81635605240513 6.17106778627357 6.39335900275359 6.32436471212572 6.64637402103381 6.59815707019296 6.35422092995755 6.05764985912241 0.19167619316982 0.199146157800271 0.193799132855588 0.194744372896925 0.199094934276012 0.197791222322358 0.216256846416693 0.209858923149243 0.213534376235113 0.201655167041587 0.197626066912353 0.194149654418189 0.199023305389105 0.196505191990316 0.200363120200983 0.191726059134389 0.203400102390489 0.204992438988012 0.199291798915773 5 5|0 +|/ 1437787 1438745 1438195 1437696 1438771 + gene protein_coding_gene TRUE TRUE AT5G04910.1 similar to REX1-B [Chlamydomonas reinhardtii] (GB:AAP12521.1); similar to Os01g0265700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042671.1) 1.09018844111993 12.6346358339742 1.01935947846997e-07 1.00905397464361e-05 16.1155587408607 12.9075658988124 1.09018844111993 0.0551596067957765 AT5G47790_at 4.95853717158331 4.13478801677972 5.98070182291493 6.0635084752667 6.40294945510531 6.24099137197587 4.91027088841335 4.70401758312787 3.25147654535802 3.63330293813198 4.65985324649327 4.69611359925581 4.95637539062369 5.35432478791125 5.11924428996265 5.37044155449115 5.39142275870686 5.29456349557883 3.69909363954546 0.174976514758145 0.176157018293040 0.184273287211122 0.181022314681774 0.183766935068030 0.178186272871991 0.175388939777799 0.177922173773582 0.194522397534433 0.187539974882886 0.184055401852862 0.182163302389629 0.174976514758145 0.176038608584809 0.17565193235654 0.185092453423037 0.180595417422803 0.182270197777679 0.177495986243518 5 5 + 19369245 19369779 19369557.364 19368518 19370670 + gene protein_coding_gene TRUE TRUE AT5G47790.1 forkhead-associated domain-containing protein / FHA domain-containing protein similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G38840.1); similar to PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) subunit 8 [Danio rerio] (GB:XP_695210.1); similar to Os08g0326100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061548.1); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984) 1.53623452451955 12.6134586841663 1.03655855985229e-07 1.02266507367270e-05 16.1014410271827 9.7410956471741 1.53623452451955 0.150287833830040 AT5G08100_at 8.21948541060044 8.1686094239119 8.97049631516727 8.73478266041888 9.40612182014279 9.03416626747277 7.37020663256665 7.28558819669549 7.3728363258452 7.35970656439586 8.44900523332635 8.30328805470133 8.32902816881541 8.36668972100653 8.4980673648809 8.12119546379315 8.39768790083543 8.60416759508349 7.22703625456751 0.141161825464928 0.140753818982088 0.142850229363508 0.142288601816322 0.145344379001381 0.150647453284020 0.149866683124244 0.153480945727024 0.161019265706268 0.152338730528240 0.142560133107951 0.143104849286476 0.140042554474523 0.152471543675595 0.14085714458294 0.140428643462844 0.15331736960017 0.142939884348516 0.148740094735361 5 5 - 2593287 2593850 2593477.727 2593051 2594652 - gene protein_coding_gene TRUE TRUE AT5G08100.1|AT5G08100.2 L-asparaginase / L-asparagine amidohydrolase Identical to L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 1) [Contains: L-asparaginase 1 subunit alpha; L-asparaginase 1 subunit beta] [Arabidopsis Thaliana] (GB:P50287;GB:Q9LEZ6); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to L-aspara (GB:Q9ZSD6); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) 1.16960041136297 12.6115734432393 1.03810491043852e-07 1.02266507367270e-05 16.1001827438963 16.2504325422428 1.16960041136297 0.0780974254326952 AT5G57910_at 5.75152700378181 6.0908968921243 7.2333841575306 7.54186110955719 7.57763032239697 7.69561692674592 3.96064032521113 4.25988482696988 5.47647330942432 4.6057724714206 5.39364319516079 4.47904896101904 4.69300216978864 5.21190496849407 4.13986471271402 5.16572345319781 5.02380583722411 5.34928125367587 4.69575643587957 0.208513912994783 0.200912619295774 0.203434558308273 0.202045643794599 0.202385188608236 0.205014578423144 0.200893523778678 0.209785099525292 0.204262445579889 0.208056469024545 0.20215296864946 0.205986133408209 0.20515363508998 0.200893523778678 0.202751113522933 0.205856512363058 0.203040097980882 0.205729152834041 0.208653239218203 5 5|0 -|/ 23468553 23469641 23468980.1 23468375 23469840 - gene protein_coding_gene TRUE TRUE AT5G57910.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30630.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE78788.1) 1.25120972351851 12.6084916752291 1.04063811229334e-07 1.02266507367270e-05 16.098125326497 11.1929477244485 1.25120972351851 0.096941210026848 AT5G37600_at 12.4843120343863 12.5045087091646 12.8756052418539 12.7967797750408 12.6817238278699 12.5189928084436 10.3849608218148 10.3109863722057 10.8788381296167 9.87037164591598 10.7646573027999 10.9543219216296 10.9328670856524 10.9406407252849 10.6258453681427 11.3267058225933 11.0250823865761 10.9723809408973 9.76577295201704 0.085473991704968 0.083701569286916 0.0881027926699416 0.0871979627597304 0.0847126189474887 0.0854029973664545 0.0848567104794323 0.0844595547734688 0.0847657683961391 0.086543528396085 0.083480159070397 0.083480159070397 0.0845671605858674 0.0846087879580487 0.0860026827509818 0.083480159070397 0.0845774143088516 0.083480159070397 0.0907726749771751 5 5 - 14950806 14951580 14951239.364 14950566 14953071 - gene protein_coding_gene TRUE TRUE AT5G37600.1 ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1); glutamate-ammonia ligase encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium Identical to Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2) (GLN1;1) (Glutamate--ammonia ligase GLN1;1) (GLN1-1) [Arabidopsis Thaliana] (GB:Q56WN1;GB:Q9FHR0); similar to ATGSKB6 (Arabidopsis thaliana glutamine synthase clone KB6), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT3G17820.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to GLN1,4 (Glutamine synthetase 1,4), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G16570.1); similar to glutamate--ammonia ligase [Brassica napus] (GB:CAA58118.1); similar to glutamine synthetase [Raphanus sativus] (GB:BAA04996.1); similar to Gln synthetase (GB:1804333B); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) 1.03411760696148 12.6039481095992 1.04438519100324e-07 1.02266507367270e-05 16.0950908097876 22.6269705005376 1.03411760696148 0.0339888187551545 AT5G18310_at 10.1899795344486 10.0679994399404 10.9021239074213 10.8950914370877 11.1760788466433 10.6215530789223 8.31627187360787 8.23538203165435 8.84793234425471 8.56554604773813 9.72431794624704 9.56999773184686 9.32400454021087 9.55444104233715 8.83659686485815 9.52222967428585 9.45730851608297 9.4081122525717 8.37996457985557 0.116607089386973 0.121832991813698 0.123917095008329 0.120507839679914 0.120187753126381 0.129022614552848 0.124640213055277 0.124579239323899 0.124418687000749 0.13024017467953 0.116607089386973 0.119363701518465 0.126911039079306 0.119759163166619 0.12872745261364 0.118198659569109 0.119835049096612 0.123540313062654 0.126540485296379 5 5|0 +|/ 6062178 6062889 6062632.7 6061702 6063150 + gene protein_coding_gene TRUE TRUE AT5G18310.1|AT5G18310.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48500.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90369.1) 1.26155767235572 12.6033215375278 1.04490307658244e-07 1.02266507367270e-05 16.0946722290835 19.061780216218 1.26155767235572 0.099257160425614 AT5G06280_at 8.60322756326181 8.88920273543803 9.91146606914945 10.0382305739729 10.2562672920103 10.0223949822538 9.60624853817308 9.54737310905016 8.16972582446047 8.46194780908218 9.8389574216395 9.5827923381423 10.0483327638689 9.82242586477861 9.61644775328844 9.92202186904717 9.76947962626507 9.76901775755701 8.65736247001856 0.130053548058891 0.130649309940254 0.133993372002483 0.130087250795902 0.126661005972053 0.128706815981702 0.128517281604957 0.130961905929433 0.146277254022751 0.155226350219821 0.126461867961707 0.129378139900993 0.126937559852113 0.128609159112294 0.126909779520269 0.125072023835921 0.136858929963985 0.130664228719837 0.143362444778900 5 5 - 1918385 1918793 1918604.909 1917642 1918897 - gene protein_coding_gene TRUE TRUE AT5G06280.1|AT5G06280.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52520.1) 1.13104123300107 12.5972413651428 1.04994311627553e-07 1.02430371622490e-05 16.0906089762769 18.7222329206689 1.13104123300107 0.0683540975898278 AT5G03380_at 9.00187391994491 9.05133723173767 10.6283003693275 10.5382055323953 10.4811529647888 10.5335844383470 9.48744258875172 9.62201522152972 9.6327940904221 9.63275597309701 10.4442059643447 10.2819156239600 10.921543430225 10.5608951830624 9.45872565248202 10.7201039604556 10.5865838439596 10.5397770660660 9.653018901215 0.103896538192888 0.105972078683673 0.105180212558409 0.105183492699726 0.106255209843934 0.112572054330434 0.104485418691032 0.105280380979489 0.113814170454297 0.106319837729632 0.106102697170848 0.104563319726421 0.105216143039823 0.106113665660015 0.107637863075885 0.103293879458582 0.104882722149978 0.107125616094510 0.106599486972161 5 5 - 832430 832952 832664.727 832103 834411 - gene protein_coding_gene TRUE TRUE AT5G03380.1|AT5G03380.2 heavy-metal-associated domain-containing protein|metal ion binding similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36950.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53965.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.02716971902417 12.5952501186636 1.05159946987204e-07 1.02430371622490e-05 16.0892777152212 19.9573599477599 1.02716971902417 0.0306763746520189 AT5G03320_at 7.90278231171 7.70870802756442 8.63514831703791 8.58082009375852 8.71846509576608 8.37076556754406 6.31157826627743 6.5331628320659 7.19199248345189 5.99471899851244 7.71515163184531 7.42943527930056 7.32743929677727 7.67281891773075 7.10462507937467 7.319391318737 7.61543010293414 7.91369285037641 6.69877817154993 0.192658623813917 0.18242227716558 0.191752663167165 0.187937978034904 0.194057650644520 0.192683349528503 0.200098552912768 0.195675607837065 0.194411529302807 0.199231911203572 0.187469329898201 0.185241871360281 0.184202139304056 0.189183117066368 0.18862087584367 0.187152137097277 0.189723912594607 0.185169062168577 0.186615335253108 5 5 + 803738 804100 803892.545 802026 804397 + gene protein_coding_gene TRUE TRUE AT5G03320.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.2); similar to Os02g0819600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048536.1); similar to protein serine/threonine kinase [Lophopyrum elongatum] (GB:AAF43496.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.17299670879265 12.5907278765194 1.05537172710980e-07 1.02430371622490e-05 16.0862533272282 14.9155511193685 1.17299670879265 0.0794189060215797 AT5G03470_at 8.37454669194038 8.73196763452752 8.92604323450865 8.85462413719327 9.68686251823276 9.73995256997842 7.42992899687732 7.33779986649811 7.47311036087598 7.15711713830006 8.32279418348075 8.13081056986316 8.19899507895017 8.51991964727359 7.7733651168167 8.37551118553214 8.64292849457705 8.18122850815653 7.44867515651493 0.156839192252068 0.153333816522617 0.156786039023639 0.156837169160513 0.162187704457652 0.160293516309694 0.176863143809459 0.165650874862030 0.177891923767438 0.162394510141866 0.158014019895361 0.153333816522617 0.163776173500337 0.15690252872501 0.158310055926295 0.156047905667887 0.161521580137721 0.174946166668997 0.167160730951045 5 5 + 867702 868719 868124 866448 869023 + gene protein_coding_gene TRUE TRUE AT5G03470.1 ATB' ALPHA (PP2A, B' subunit, alpha isoform); protein phosphatase type 2A regulator Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa. Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform (PP2A, B' subunit, alpha isoform) (AtB' alpha) (B'ALPHA) [Arabidopsis Thaliana] (GB:O04375); similar to ATB' BETA (Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime beta), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT3G09880.1); similar to H0811E11.3 [Oryza sativa (indica cultivar-group)] (GB:CAC09487.2); similar to Os03g0681800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050908.1); contains InterPro domain Protein phosphatase 2A, regulatory B subunit, B56; (InterPro:IPR002554) 1.12093484851753 12.5899438083019 1.05602726002582e-07 1.02430371622490e-05 16.0857288144598 16.449129864542 1.12093484851753 0.06570535955039 AT5G42870_at 4.95767772254803 5.46552510085858 6.30752225736677 5.87865249578069 7.4248226713782 6.7169332146949 4.58006207957989 4.02136942488973 4.22640761700241 4.52615957354303 7.11990599977079 6.72295469079852 6.8215527447914 6.41368714280042 5.54698736806936 6.74236250088198 5.86810304302204 4.81290632827531 4.68096454264512 0.285107097558409 0.282265040928911 0.289368987159191 0.298486168532321 0.286846248939315 0.299406855871561 0.289316880685953 0.296848881174801 0.294229434405135 0.282265040928911 0.284777284472351 0.282265040928911 0.287828324961379 0.291197692450373 0.292152233990295 0.288018774120698 0.299530992591963 0.300765002137215 0.286211497780999 5 5|0 -|/ 17203087 17204202 17203782.375 17202691 17206909 - gene protein_coding_gene TRUE TRUE AT5G42870.1 lipin family protein similar to lipin family protein [Arabidopsis thaliana] (TAIR:AT3G09560.1); similar to lipin, N-terminal conserved re (GB:ABA94690.1); contains InterPro domain LNS2, Lipin/Ned1/Smp2; (InterPro:IPR013209); contains InterPro domain Hedgehog signalling region, N-terminal; (InterPro:IPR009045); contains InterPro domain Lipin, N-terminal conserved region; (InterPro:IPR007651) 1.80201882203689 12.584469217769 1.06061675303514e-07 1.02455491128028e-05 16.0820653357341 11.0360213150695 1.80201882203689 0.193873997750881 AT5G41870_at 5.43169482085496 6.01466266593907 6.56259967482534 6.70721876840955 6.95424906684615 6.94986790955794 5.61130338565739 5.6026529885026 4.76089434754164 5.10273417888626 6.36203855863692 6.92282796755018 6.47603857284413 6.45715582683284 6.38150859933616 6.55842756744417 7.2031925357029 6.3347439034327 5.58985946376582 0.207794870710400 0.209713277696381 0.219881998863402 0.205844721819940 0.208025603283073 0.210377968149946 0.202932639970101 0.205303116811468 0.222049903550652 0.216972931428295 0.202932639970101 0.202932639970101 0.202932639970101 0.205594805488749 0.213791735363295 0.216518996665460 0.219654635987731 0.212245625062719 0.225656388116617 5 5 - 16776083 16776619 16776348.091 16775937 16777804 - gene protein_coding_gene TRUE TRUE AT5G41870.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT4G23820.1); similar to Os05g0587000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056466.1); similar to Os02g0256100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046468.1); similar to putative polygalacturonase [Oryza sativa (japonica cultivar-group)] (GB:AAT44156.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat; (InterPro:IPR006626) 1.28211720887292 12.5839985393805 1.06101234770980e-07 1.02455491128028e-05 16.0817502715026 12.0983583375093 1.28211720887292 0.103956777717456 AT5G02910_at 4.41312797446397 5.02711697969318 6.11894029640882 6.00611249946781 6.44391122615225 6.43664540407748 5.11478256021548 4.80216783333116 3.39821978759147 4.05355111184183 5.15878120900748 5.4517219605068 5.2003373895829 5.51904731978934 5.22641582765307 5.71045166459294 5.41658095468471 5.02598384767523 4.61193725391877 0.259373272631322 0.253738168203331 0.255655866429646 0.255928307683917 0.253738168203331 0.262720236850287 0.253738168203331 0.265489829163317 0.267035866840742 0.256954540246918 0.258996558317301 0.253738168203331 0.255118139378527 0.259383899642544 0.266939121523150 0.253738168203331 0.258784638044554 0.264246510279851 0.256237257687970 5 0|5 /|+ 678259 678873 678546.3 677085 679041 + gene protein_coding_gene TRUE TRUE AT5G02910.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G28410.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE79467.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE85220.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.36476624508492 12.5561495934502 1.08470717964652e-07 1.04510793070492e-05 16.0630814634597 10.2253011331282 1.36476624508492 0.120828021661056 AT5G63620_at 9.2078533943469 9.32182953855974 10.0967005043782 10.0927735642992 10.3779907663902 10.3445348995475 8.80601248317653 8.8774281103944 8.96838005456374 8.78991866334794 9.71961564754573 9.41301609494081 9.75105585367647 9.8958935374092 9.6076336109615 9.81668107374232 9.80964067791703 9.6264459120551 8.80504914698262 0.104144534299154 0.105549148551101 0.106835866173246 0.105585510828536 0.107420647387851 0.112853700159303 0.100897544262838 0.110501798494977 0.112899961014007 0.105495531824961 0.101377850317078 0.105494094878547 0.100474803001559 0.101281766726057 0.100869484681755 0.101331434779948 0.108814162577847 0.105978845619042 0.103250934637276 5 5|0 -|/ 25483611 25484463 25484099.2 25483354 25485659 - gene protein_coding_gene TRUE TRUE AT5G63620.1|AT5G63620.2 oxidoreductase, zinc-binding dehydrogenase family protein similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G64710.1); similar to Alcohol dehydrogenase superfamily, zinc-containing [Medicago truncatula] (GB:ABE83681.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 1.01263378238367 12.5479592906833 1.09178494548785e-07 1.04959487650811e-05 16.0575808233996 18.9203639523012 1.01263378238367 0.0239950567375034 AT5G53120_at 9.92685358106263 10.1866015318973 11.6107773054434 11.4686215517418 10.5208042909888 10.3030125939942 10.5877925937986 10.6336093696787 8.1527102811173 9.19869713693729 9.984392524325 9.56895103832773 10.4433476712389 10.4512503774965 9.46878108515044 10.4581042107683 10.8707448026948 10.5618339941077 8.58819234317123 0.118391493143415 0.115997031664369 0.113433167936142 0.116219146049312 0.114195393114107 0.113075911710935 0.116860487796988 0.117139765074761 0.136819563210289 0.121047389811612 0.120113011215751 0.117668425179641 0.113393206957197 0.114985638532649 0.123701658609702 0.113075911710935 0.118804059185259 0.114692242980455 0.127720072552111 5 5|0 +|/ 21554003 21554833 21554498.625 21551776 21555042 + gene protein_coding_gene TRUE TRUE AT5G53120.1|AT5G53120.2|AT5G53120.3|AT5G53120.4|AT5G53120.5 SPDS3 (SPERMIDINE SYNTHASE 3) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. similar to SPDS1 (SPERMIDINE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT1G23820.1); similar to spermine synthase [Malus sylvestris] (GB:BAE19758.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) 1.11074106285222 12.5378054018471 1.10062946342008e-07 1.04997888252401e-05 16.0507549869155 20.0909885857035 1.11074106285222 0.0641026002505138 AT5G61900_at 7.5341756293423 6.898859338003 9.48512691819184 9.64354734092367 8.65991858808915 8.22145152572305 5.20307477108135 4.23574548461142 5.88937375403474 5.6430518956187 6.29352172823433 6.3300220800215 5.95455923457386 6.7653316114926 6.38988257985654 6.82896655096631 6.72397642153576 6.7239467335813 5.44276201814007 0.217233312705879 0.218096298568186 0.233177156269281 0.22945023108682 0.227070735256031 0.228481768642556 0.220169260720733 0.223245076618655 0.228452846818902 0.224741053711653 0.21607847576065 0.219671860050934 0.217783791270924 0.224135909898631 0.21607847576065 0.221226171383356 0.223459451622319 0.217052664924538 0.219458124469896 5 5|0 -|/ 24873170 24874064 24873609 24872887 24876559 - gene protein_coding_gene TRUE TRUE AT5G61900.1|AT5G61900.3 BON1 (BONZAI1); calcium-dependent phospholipid binding Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response. similar to BON2 (BONZAI 2) [Arabidopsis thaliana] (TAIR:AT5G07300.1); similar to BON3 (BONZAI 3) [Arabidopsis thaliana] (TAIR:AT1G08860.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT58837.1); similar to Os02g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046976.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.93871363287034 12.5354388124783 1.10270206501602e-07 1.04997888252401e-05 16.0491630480479 13.5650733278944 1.93871363287034 0.215916686989338 AT5G65750_at 5.72557760695649 5.77801821111303 6.83625666637414 6.86460561116056 7.06339661450733 6.50379580677657 4.41199541248387 4.28544991138175 3.84811835355873 4.53937955532469 4.90164480800182 5.08398792793615 5.21384104584168 5.19206751830578 4.89289057346789 5.17983226185488 5.28589637284032 4.98198929026544 4.64287035693678 0.231562186351903 0.230574335169792 0.233370540148507 0.232667451496786 0.231510598973902 0.230984331260524 0.232505660111455 0.230943365402137 0.239011094895647 0.230800649921219 0.227652055326555 0.230470973235615 0.234339492801580 0.227652055326555 0.231147436635256 0.227652055326555 0.241655521591455 0.237557582562675 0.227652055326555 5 5|0 +|/ 26324421 26325072 26324709.2 26320932 26325415 + gene protein_coding_gene TRUE TRUE AT5G65750.1 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G55410.1); similar to hypothetical protein AN5571.2 [Asper (GB:XP_663175.1); similar to Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS) [Ostreococcus tauri] (GB:CAL52875.1); similar to hypothetical protein DDBDRAFT_0219311 [Dictyostelium discoideum AX4] (GB:XP_636906.1); contains InterPro domain 2-oxoglutarate dehydrogenase, E1 component; (InterPro:IPR011603); contains InterPro domain Transketolase, central region; (InterPro:IPR005475); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) 1.25740801271419 12.5353357186792 1.10279244859888e-07 1.04997888252401e-05 16.0490936908946 10.6511243868047 1.25740801271419 0.0998212704377594 AT5G54090_at 6.20232714057002 6.09403539217247 7.33731552630446 7.31477963267982 7.96435358823845 7.70147430107995 6.25704710343896 5.88346797701786 5.2211812030326 6.20886686389707 6.77019056255744 6.9829404695045 7.07231123175785 6.47146522317878 6.1348726975898 6.96361660808642 7.27795520507155 6.29198884499005 6.16451931946166 0.250205784844835 0.254786101182155 0.267392987827922 0.268603716674843 0.254481395967211 0.259239090337529 0.25968171317985 0.261248190069234 0.27504702524285 0.259102303112984 0.250205784844835 0.250205784844835 0.250456384289873 0.253588310645264 0.258669200044631 0.251488100584958 0.259904230105350 0.262310171474777 0.260225997686566 5 5|0 -|/ 21965509 21966225 21965853.7 21965350 21969776 - gene protein_coding_gene TRUE TRUE AT5G54090.1 DNA mismatch repair MutS family protein similar to DNA mismatch repair MutS family protein [Arabidopsis thaliana] (TAIR:AT1G65070.1); similar to putative DNA mismatch repair protein [Oryza sativa (japonica cultivar-group)] (GB:AAM94926.1); contains InterPro domain DNA mismatch repair protein MutS, C-terminal; (InterPro:IPR000432); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain MutS 2 protein; (InterPro:IPR005747) 1.17553658432706 12.5341454541845 1.10383655223544e-07 1.04997888252401e-05 16.0482928778758 13.1496117830907 1.17553658432706 0.0813360330529268 AT5G12210_at 8.98980192788832 9.13681993363583 9.98352645492672 9.9061480809532 10.3588912521490 9.94318125813257 8.27289061431108 8.13300893473607 8.34596677724693 8.08292165983811 9.19857800621852 8.98270068885529 9.2743844105767 9.23836316095793 8.88078680990639 9.10680364402028 9.14882997622483 9.1747534105678 8.14372398105721 0.105461475222183 0.106196374244339 0.112507450941530 0.107255320203105 0.108595506960956 0.110790012093305 0.109592633546706 0.113366239117854 0.108236210032605 0.107133859500731 0.108121419646162 0.107468055348194 0.107180222048596 0.116520803651480 0.106964236729976 0.107373311628448 0.108942603122088 0.104966576824463 0.111732099125242 5 5|0 +|/ 3948529 3949567 3949133.4 3947104 3949867 + gene protein_coding_gene TRUE TRUE AT5G12210.1|AT5G12210.2 geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative similar to geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative [Arabidopsis thaliana] (TAIR:AT3G12070.2); similar to putative Rab geranylgeranyl transferase type II beta subunit [Glycine max] (GB:AAQ62584.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) 1.17479280813305 12.5336256523591 1.10429286157133e-07 1.04997888252401e-05 16.0479431230647 17.9987939668233 1.17479280813305 0.0811667680588601 AT5G52880_at 6.59709729506186 6.68337663034978 7.78089730830665 8.09948213594886 8.84551979323608 8.26420619899887 7.10868791800361 6.48680455249538 5.82618631623968 5.94818525348611 7.19432770817194 7.27455256425942 7.69523020099742 7.66044575002632 7.26372199547984 7.50027100343502 7.31713279727824 7.22778598638565 5.57767670804237 0.256820943311043 0.259181385225571 0.273026923884672 0.263972735964890 0.264832692486723 0.267561404442682 0.267362261300445 0.261219413566758 0.273301950345260 0.266781126024756 0.263385839079339 0.261726572064232 0.257193259806873 0.271027838271756 0.262462820479162 0.265864281500612 0.272058942631058 0.263269508466094 0.267194461684570 5 5|0 -|/ 21449234 21450155 21449654.625 21449062 21450938 - gene protein_coding_gene TRUE TRUE AT5G52880.1 F-box family protein similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE83073.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 1.56810108415490 12.5017976935865 1.13262825431334e-07 1.07033209370672e-05 16.0264915750497 14.0711087757219 1.56810108415490 0.158002303840728 AT5G04940_at 5.96592222004918 6.39733048151941 7.81518823242861 7.63048277205278 8.2927073607256 8.28431084653427 7.37685713908612 7.35788970582864 5.7166844500339 6.38004424463838 7.19697048656546 7.26604732235072 7.44019510919033 7.25598865409521 7.04433790666366 6.98027419578561 7.50273930937675 7.26227081373474 6.29424877420063 0.202087849690839 0.203512980134841 0.204287123636175 0.198791043388614 0.203994266971148 0.198791043388614 0.203196957738618 0.202799857229687 0.218581884468688 0.200935823658789 0.201807084413668 0.198791043388614 0.203375607533097 0.211237458593488 0.198791043388614 0.203520080394954 0.198791043388614 0.206155401435322 0.211309748591906 5 5 - 1454619 1455190 1454916.182 1454168 1456991 - gene protein_coding_gene TRUE TRUE AT5G04940.1|AT5G04940.2 SUVH1 (SU(VAR)3-9 HOMOLOG 1) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog protein 1) (Su(var)3-9 homolog protein 1) (Protein SET DOMAIN GROUP 32) (SUVH1) [Arabidopsis Thaliana] (GB:Q9FF80); similar to SUVH3 (SU(VAR)3-9 HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G73100.1); similar to SET-domain-containing protein [Nicotiana tabacum] (GB:CAC67503.1); similar to SRA-YDG; SET-related re (GB:ABE79848.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain Pre-SET; (InterPro:IPR007728) 1.17222478403858 12.5007836391465 1.13354394937364e-07 1.07033209370672e-05 16.0258069607840 14.0770504936170 1.17222478403858 0.0812913963698227 AT5G18130_at 9.87815092985636 10.1303236519423 10.5957358197099 10.6490437796835 11.4841208148655 10.9664824786501 8.9458052575476 8.87761226924132 7.77895364575174 8.12772204492757 8.92448866320355 8.06536805508153 9.55777511583976 9.36814904378381 7.22310544384813 9.44467116306327 9.62094609859166 9.35225909050645 7.77551282559004 0.174891240955253 0.167749382130560 0.172538587307165 0.173214700442501 0.172320721280279 0.165197142176361 0.172330731361612 0.162772682858757 0.177256227641536 0.180045689306035 0.168130494827402 0.172844778218806 0.167085673030647 0.166031969484287 0.187245453479337 0.168254018283344 0.170992787001030 0.167367928503581 0.187881761748495 5 5 + 5995902 5997108 5996179.182 5995481 5997500 + gene protein_coding_gene TRUE TRUE AT5G18130.1|AT5G18130.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03870.2); similar to hypothetical protein MtrDRAFT_AC156827g15v1 [Medicago truncatula] (GB:ABE86405.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03870.1); similar to hypothetical protein MtrDRAFT_AC156827g15v1 [Medicago truncatula] (GB:ABE86405.1) 1.25820259578185 12.4989503347168 1.13520147672028e-07 1.07033209370672e-05 16.0245690680755 18.6102384616852 1.25820259578185 0.100763676931082 AT5G04900_at 7.59256914978736 7.55611117101202 8.5474603671329 8.72530334908372 8.85616688959617 8.7252042762999 7.87425166118636 8.15439406481764 7.0808816249552 7.38175827342488 8.59020709125562 8.52503481764026 8.6613908020615 8.66014548236519 8.49654590026546 8.9207691312232 8.78917116749184 8.26547437423393 7.53361000485492 0.1575343246766 0.159404927704884 0.165553481846573 0.158982267449112 0.157712331201730 0.169229722058699 0.159693382709498 0.154599643507090 0.184198832323315 0.170883314206146 0.162300198026383 0.164126789466811 0.162549920753967 0.165616907073970 0.163639519869009 0.15816695901261 0.163676379876305 0.157459782114521 0.158118987576951 5 5|0 +|/ 1435827 1436983 1436397.571 1434775 1437331 + gene protein_coding_gene TRUE TRUE AT5G04900.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT4G13250.1); similar to putative oxidoreductase protein [Oryza sativa (japonica cultivar-group)] (GB:AAO73232.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.10035562678306 12.4985392943594 1.13557346857771e-07 1.07033209370672e-05 16.0242914913004 16.2267704395622 1.10035562678306 0.0620560325736295 AT5G19070_at 5.64219543472651 5.8761236636895 6.63280464585868 6.70329848478275 7.82931942520727 7.37973785572076 5.82864052987275 5.25884646939343 4.10760665673989 4.00329298522124 5.45103544232128 5.24138920945225 4.96979603242533 5.68287894444892 5.28130600584193 5.82572221710269 5.71698909066099 5.20400662204265 4.0833488212924 0.287137642837746 0.283863179849447 0.285998859562514 0.279383493198007 0.279383493198007 0.28548277373152 0.283415873806391 0.28460564917137 0.306099649740292 0.28108194726961 0.279383493198007 0.281431843188882 0.283752473508555 0.279383493198007 0.279383493198007 0.279383493198007 0.294602077641997 0.280006330035382 0.287387350126566 5 5|0 +|/ 6376383 6377364 6376791 6375247 6377662 + gene protein_coding_gene TRUE TRUE AT5G19070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03260.1); similar to hypothetical protein Tery_1993 [Trichodesmium erythraeum IMS101] (GB:YP_721717.1); similar to Os07g0655900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060500.1) 1.42086476812882 12.4931434316008 1.140469054061e-07 1.07261464528608e-05 16.0206465581236 11.1370657803005 1.42086476812882 0.132528766050290 AT5G28530_at 2.87423438078477 2.89868234341027 3.86885763455830 3.62476857019054 3.80346832013333 3.81357532346501 3.10429008495433 3.05816212347884 2.53854744730188 2.79115155165624 4.24502303112465 4.74442270435481 4.14591064090237 3.87172731207812 4.68199464035956 4.28663421344894 3.88024991830334 3.64894399631475 3.34774355914865 0.23925418219462 0.232952876998172 0.235808996562993 0.233741366136847 0.237843246903298 0.240228770502115 0.247747374788336 0.240011379773201 0.240233471457118 0.248596961659758 0.233546374427036 0.233169064431754 0.233676937575452 0.242434936428688 0.237436379670513 0.232952876998172 0.235013808494196 0.239703421367078 0.234670733827715 5 5 - 10525123 10525637 10525401.182 10525082 10527304 - gene protein_coding_gene TRUE TRUE AT5G28530.1 FRS10 (FAR1-RELATED SEQUENCE 10); zinc ion binding similar to FRS11 (FAR1-RELATED SEQUENCE 11), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G10240.1); similar to FAR1 [Medicago truncatula] (GB:ABE91851.1); similar to FAR1; Zinc finger, SWIM-type [Medicago truncatula] (GB:ABE78949.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1; (InterPro:IPR004330) 1.04472884166916 12.4855191178735 1.14742569313883e-07 1.07682154719059e-05 16.0154928362682 6.92105192752846 1.04472884166916 0.0432315054844336 AT5G45350_at 11.4708292468086 11.4581532974101 12.8086979669751 12.9017837312352 12.6672868326981 12.5080922370143 11.9185954672521 11.9594879567055 11.2638409501681 11.3639462981396 12.0606235975626 11.9327914287694 12.4796128986559 12.1964050666688 11.7345973181309 12.4433761171943 12.6389419948341 12.2487181136617 10.9565522737895 0.0749563584115388 0.0717821073736222 0.0805470894573459 0.0769144946973837 0.0749179779581314 0.0816829066078317 0.0743210377753935 0.0725273794843162 0.0829456003446589 0.0730296727813598 0.0729393382112871 0.0715560118364967 0.0728519034776853 0.0745491669557919 0.072517729729773 0.0717726624687105 0.0730115744721061 0.0736404334504882 0.0792389851577382 5 5|0 -|/ 18399413 18400018 18399596 18399064 18400926 - gene protein_coding_gene TRUE TRUE AT5G45350.1|AT5G45350.2 proline-rich family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT4G19200.1); similar to Os05g0119300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054483.1); similar to putative glycine and proline-rich protein [Sporobolus stapfianus] (GB:CAB61840.1); contains InterPro domain XYPPX repeat; (InterPro:IPR006031) 1.02090108808613 12.4715715615986 1.16027169568108e-07 1.08652531473243e-05 16.0060543686408 23.9174474208292 1.02090108808613 0.0327621110391705 AT5G19400_at 7.05439678652492 6.67063116847276 8.2542090504059 8.18741821283889 8.54234084383448 8.11785096982423 6.98745242227164 6.85947737761798 6.5829374572186 6.47884339556063 7.80931847775503 7.46153381432851 7.69787180233836 7.52797750410158 7.1991607157885 7.78945626103866 7.49845063008751 7.88096264377295 6.34249769110742 0.226525741506561 0.210593904709129 0.219929982767161 0.207433236772574 0.205870644804613 0.227073013531046 0.206588475518852 0.206103434632353 0.226415403804705 0.208056103373775 0.207700680254336 0.209485620531355 0.210009888865093 0.218074205082083 0.206641764187106 0.207161774649186 0.216107929541783 0.205870644804613 0.21961036774266 5 5 + 6543788 6544676 6544001.5 6540005 6545017 + gene protein_coding_gene TRUE TRUE AT5G19400.1 similar to binding [Arabidopsis thaliana] (TAIR:AT1G28260.2); similar to putative cytokinin inducibl protein [Oryza sativa (japonica cultivar-group)] (GB:AAQ56453.1); similar to Os08g0305300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061501.1); contains domain SMG-7 (SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7) (PTHR15696); contains domain TPR-like (SSF48452) 1.26123198184661 12.4646365206557 1.16671722825971e-07 1.09020651427325e-05 16.0013562912650 14.6223142685306 1.26123198184661 0.102132506913656 AT5G09920_at 8.77603522122568 8.89539159399777 9.81506925345464 9.9552870956258 10.3624550440498 9.97547107469877 9.0819356023232 8.74239142785755 7.91575591533099 8.14255677917665 9.38736221005478 9.31682551594786 9.36644392003485 9.3013177810895 9.10422048591741 9.5994564577361 9.49434784952655 9.22340448331134 8.10152905692229 0.179721033141624 0.172218897448674 0.168186669928683 0.167627244278744 0.167069947088615 0.172482104654614 0.168873725997053 0.172075601097975 0.192365551104931 0.177557654220080 0.17104884827113 0.167446871393363 0.165318382544798 0.174006735214138 0.174099170392930 0.165318382544798 0.17312612502901 0.170893673701889 0.178456888452964 5 5|0 +|/ 3096298 3097116 3096688.556 3096184 3097576 + gene protein_coding_gene TRUE TRUE AT5G09920.1 RPB15.9 (RNA polymerase II 15.9) 15.9 kDa subunit of RNA polymerase II similar to 4D11_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67517.1); contains InterPro domain HRDC-like; (InterPro:IPR010997); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590); contains InterPro domain RNA polymerase Rpb4; (InterPro:IPR005574) 1.22451195487426 12.4461163816407 1.18412196760488e-07 1.10409038448669e-05 15.9887935086507 18.1517310000353 1.22451195487426 0.0946205277210678 AT5G63330_at 6.64314503009901 6.97439495852031 7.9886706396297 8.04099734514283 8.29579713422622 8.0767795015047 7.25491338870425 7.42950606547034 6.5264788312387 6.2977553022774 7.81504508590437 8.2147269443595 8.2663615112468 7.67656501975347 7.0107688659621 8.06795425201333 7.85388843945963 7.73634515901554 6.88793700968301 0.202027090714283 0.184419324052216 0.193999622904015 0.185705786034414 0.193115411207389 0.18888499645842 0.188268869760660 0.186612464769525 0.199951072842867 0.195603312964753 0.194670589548788 0.184419324052216 0.191100653341544 0.201720419717155 0.20391031255309 0.184419324052216 0.190939658766247 0.184419324052216 0.202029560800982 5 5 - 25394416 25395148 25394730.091 25394322 25396523 - gene protein_coding_gene TRUE TRUE AT5G63330.1|AT5G63330.2 DNA-binding bromodomain-containing protein|DNA binding similar to ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9), DNA binding [Arabidopsis thaliana] (TAIR:AT5G14270.1); similar to global transcription factor group E [Zea mays] (GB:AAO84020.1); similar to putative global transcription factor group E [Oryza sativa (japonica cultivar-group)] (GB:BAD19338.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 1.14227724487102 12.4215875717567 1.20760998853248e-07 1.1235746244495e-05 15.9721178429446 14.7884908199692 1.14227724487102 0.0756143784249114 AT5G42830_at 5.998784759321 6.31972030439699 7.82802713963807 7.96782895681303 6.09147263081823 6.06291200714971 2.62096268385234 2.6309417496767 4.62815566799315 3.44319210053599 3.45683146392658 4.00639102906484 3.04380264442038 3.19259241004326 3.28615732405646 3.20873862459089 3.55609017068027 3.50280572371259 3.39992649741294 0.355481743910742 0.354727699720629 0.353730472169319 0.357331938814113 0.370099664161026 0.362393791097864 0.345938221397954 0.351718246786692 0.352771842466403 0.346189465306795 0.344946017815792 0.355595721500401 0.351572481277426 0.344913758475001 0.348071757618625 0.344913758475001 0.348445855639689 0.344991210965535 0.344913758475001 5 5 + 17194555 17195110 17194785.909 17193612 17195246 + gene protein_coding_gene TRUE TRUE AT5G42830.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07850.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) 1.08893794722878 12.4154433271773 1.21357264031211e-07 1.12670452535871e-05 15.9679341194063 9.30529841018789 1.08893794722878 0.0608058690782268 AT5G18750_at 5.12407586596229 5.58586796941666 6.35504087633481 6.25468492551945 5.82388866042539 6.10127457932181 3.84267015301333 4.07142550644709 3.7456634553873 3.17217275469623 4.51043440498206 4.76915175438081 4.81264236441474 4.79878331658637 4.27787120113097 4.63183845664766 4.44175952857991 4.69095144892307 3.84033552218430 0.2552246839832 0.251829410252567 0.264058944517168 0.259622492241471 0.259171602596361 0.254211438595233 0.257288814169727 0.248342681394324 0.257778173547466 0.248342681394324 0.251370299084756 0.252882331460022 0.248342681394324 0.253850494977588 0.262615913571617 0.248342681394324 0.262578993169814 0.26468962279131 0.254572859385291 5 5 + 6257243 6257778 6257491.455 6255179 6257934 + gene protein_coding_gene TRUE TRUE AT5G18750.1 DNAJ heat shock N-terminal domain-containing protein similar to heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT3G06340.2); similar to Os06g0535300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057790.1); similar to heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] (GB:ABF69988.1); similar to Os01g0375100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043077.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.25416710102847 12.3655270304748 1.26321859419091e-07 1.17029082184851e-05 15.9338466012433 9.4962342188276 1.25416710102847 0.102759390653858 AT5G16820_at 6.73667104470902 7.015563098668 7.7137822254825 7.79866721416637 8.53121387201126 7.39944682017807 5.67096698847974 5.75108150913293 4.28801655723308 4.85164232153466 6.71594317208061 6.42467300336308 6.96297674279086 7.18055219129006 6.4569658630081 6.4532882470708 6.72847062105783 6.67682454384662 4.70996718668312 0.22536040359877 0.221341909171589 0.225444789708388 0.223767846514435 0.221919339741662 0.238711306694921 0.226480648379192 0.221341909171589 0.238594751341725 0.230041717975522 0.221341909171589 0.223845411702087 0.225176134155958 0.234987460062611 0.221341909171589 0.221341909171589 0.224669669176864 0.230206402028088 0.227968933376620 5 5 + 5531913 5532462 5532134.091 5530276 5532892 + gene protein_coding_gene TRUE TRUE AT5G16820.1|AT5G16820.2 HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. Identical to Heat stress transcription factor A-1b (AtHsfA1b) (Heat shock factor protein 3) (HSF 3) (Heat shock transcription factor 3) (HSTF 3) (HSFA1B) [Arabidopsis Thaliana] (GB:O81821;GB:Q9LFD6); similar to ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02990.1); similar to HSF3 DNA-binding domain/VP16 activation domain fusion protein [synthetic construct] (GB:AAN86075.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Transcription regulator VP16-like; (InterPro:IPR011077); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.82531332447934 12.3536390384474 1.27536541347056e-07 1.17803793737768e-05 15.9257023941734 12.7354260065437 1.82531332447934 0.202725338895606 AT5G57060_at 7.0159090976396 7.73426995425038 8.6357092851237 8.77321016848492 9.47147754370782 8.6275832867581 7.28200017024578 6.66611201366417 6.73096580367035 6.05032732737278 8.79886216326383 8.63757949302167 8.1016496890008 8.88213104508148 7.93202800925103 8.5796577590946 8.04251656739049 8.46825268502933 5.96729293420399 0.207615510645008 0.200567915149416 0.209129556403051 0.197126886625183 0.202809798209245 0.218181456245145 0.198117557932196 0.213243838601714 0.216478123744125 0.207370450619807 0.200251003254544 0.197373249737622 0.201346490251864 0.197902608588495 0.198879571390733 0.197126886625183 0.212402359648658 0.206853667475535 0.226387759996214 5 5|0 +|/ 23108269 23108995 23108627.444 23107378 23109214 + gene protein_coding_gene TRUE TRUE AT5G57060.1|AT5G57060.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26060.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79016.1); contains domain 60S RIBOSOMAL PROTEIN L18A (PTHR10052); contains domain 60S RIBOSOMAL PROTEIN L18A, PLANT (PTHR10052:SF2) 1.94161412502230 12.3520341307439 1.27701498122378e-07 1.17803793737768e-05 15.9246021389012 15.365715622388 1.94161412502230 0.220698950914851 AT5G61060_at 6.99453013392963 7.01972125957905 7.89756268765595 8.10814282922876 7.89248862723215 7.55563763686601 5.97635358587534 6.20608709509699 5.75272436723502 5.64493212635856 6.64131658737236 6.73526557179682 6.3449802237056 6.96118456526188 6.76661569961876 6.89118652882191 6.50126829676961 6.59514132234994 5.68208058355687 0.189906651351661 0.184116615525162 0.188554804806662 0.195399573878612 0.185239079739311 0.197667157153501 0.188922228126907 0.184801752788364 0.208527253609125 0.196443012340649 0.186329677503756 0.192585009225155 0.187884202097294 0.191541187300004 0.189780734188974 0.185186228335597 0.193894374628614 0.190461066248445 0.188894487333226 5 5|0 -|/ 24584635 24585096 24584944.429 24584017 24588292 - gene protein_coding_gene TRUE TRUE AT5G61060.1 HDA05 (HISTONE DEACETYLASE5); histone deacetylase Encodes a member of the histone deacetylase family. similar to HDA18 (histone deacetylase 18), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G61070.1); similar to putative histone deacetylase [Oryza sativa (japonica cultivar-group)] (GB:BAC84464.1); similar to Os07g0602200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060205.1); similar to HDA1 [Zea mays] (GB:AAP92528.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 1.15032954185205 12.342484362374 1.28687864517070e-07 1.18461664168021e-05 15.9180514512583 13.3927482528558 1.15032954185205 0.079534512191968 AT5G43780_at 9.62703995143778 9.8258574111569 10.6064022866230 10.7969027152743 10.2191201728341 9.99699795998758 8.84834583162817 9.24298366756482 8.50676949097144 9.05944958286634 10.1539847479689 9.53211876608108 10.4186939909423 10.5470066057471 9.11625926029662 10.3696799105843 10.4827149533420 10.3954145950435 8.66696216846653 0.113770357651911 0.113085733026739 0.117186339109363 0.117466397952034 0.116901604964721 0.114740745811663 0.120550694473165 0.120184993815998 0.131791461710202 0.121465718723060 0.111942922050160 0.112275917300556 0.115405341418931 0.122567691433052 0.118400163100042 0.114000128194207 0.121638804266341 0.118586396743668 0.120991206311486 5 5|0 -|/ 17606915 17607735 17607327.5 17606621 17608762 - gene protein_coding_gene TRUE TRUE AT5G43780.1 APS4 sulfate adenylyltransferase, ATP sulfurylase similar to APS3 (ATP sulfurylase 2), sulfate adenylyltransferase (ATP) [Arabidopsis thaliana] (TAIR:AT4G14680.1); similar to APS1 (ATP sulfurylase 3) [Arabidopsis thaliana] (TAIR:AT3G22890.1); similar to APS2 (ATP SULFURYLASE PRECURSOR) [Arabidopsis thaliana] (TAIR:AT1G19920.1); similar to ATP sulfurylase [Brassica juncea] (GB:CAA11417.1); similar to ATP sulfurylase [Brassica juncea] (GB:CAA11416.1); similar to ATP sulfurylase (GB:AAA92350.1); contains InterPro domain ATP-sulfurylase; (InterPro:IPR002650) 1.20069471227439 12.3349921810350 1.29467514749722e-07 1.18926860735891e-05 15.9129076366315 19.3311451751561 1.20069471227439 0.09171833422504 AT5G64120_at 3.89987220493675 4.25875546061826 3.87833919610962 4.50081205721798 5.52923182984379 5.47740813336198 2.36772976231380 2.19338863949226 5.14299070693465 3.591939136734 4.35553720577363 5.14422224187971 3.81814270176749 4.87026523195261 5.74329631282137 5.02795064734715 4.25607426963843 6.48533525413936 2.88719581450477 0.244565777502978 0.249832995165231 0.255306895032258 0.250305742321634 0.244739779378171 0.256204098373683 0.257999262958598 0.252704620052917 0.250492135434028 0.254375364237670 0.246635854623256 0.244565777502978 0.246575718768685 0.245522718255624 0.244565777502978 0.244565777502978 0.248601597905029 0.250657332163883 0.257562992349344 5 5|0 -|/ 25676874 25677761 25677214.8 25676532 25678228 - gene protein_coding_gene TRUE TRUE AT5G64120.1 peroxidase, putative encodes a cell wall bound peroxidase that is induced by hypo-osmolarity Identical to Peroxidase 71 precursor (EC 1.11.1.7) (Atperox P71) (ATP15a) (ATPO2) (PER71) [Arabidopsis Thaliana] (GB:Q43387;GB:Q9SBA0); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G39580.1); similar to peroxidase [Populus alba] (GB:BAE16616.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 1.37753619220012 12.3139208836420 1.31687932102892e-07 1.20638519618753e-05 15.8984195683479 8.4315145950982 1.37753619220012 0.128264934066540 AT5G34940_at 2.96764224287656 2.90544412828524 5.54146757309343 6.13285563332483 2.95842739914096 2.6945847970154 2.15863231339608 2.11044717132429 2.55844265034346 2.60409617757468 2.77109271650181 4.08291428429144 2.82873506699231 3.69913153476873 3.39243118590603 3.11754396543207 3.46201639651393 2.54822688705868 2.15220590721335 0.198941471430666 0.210033332184207 0.241282605737225 0.233957867344264 0.201452788486526 0.201678943643548 0.203372839731988 0.207092966634610 0.207546287927303 0.201499185593931 0.202039207229678 0.201730335002992 0.201190989962949 0.197025823873177 0.207185171718462 0.201389638503009 0.197101898672019 0.203091765887416 0.196801699214307 5 0|5 /|- 13253145 13253894 13253473.444 13253059 13256069 - gene protein_coding_gene TRUE TRUE AT5G34940.1|AT5G34940.2|AT5G34940.3 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07830.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 1.29790282315620 12.3120472439987 1.31887367134683e-07 1.20638519618753e-05 15.8971297720783 6.27169253217058 1.29790282315620 0.112889908268684 AT5G04760_at 6.90230720034486 7.34677462368429 8.84080023532043 8.92803716137058 9.11289474468678 8.77162104154368 7.26595749501187 7.77359104590106 5.9655103676127 6.30895061659562 7.10186322354885 6.48098815973861 7.5631797651193 7.27053354518261 6.37997613446546 7.73762822287458 7.96684607826014 7.18287763569069 5.7626247987378 0.196855640737524 0.191545445975522 0.188501304834313 0.194718332891466 0.195042075973327 0.202177176041071 0.192538232478743 0.201131661873565 0.20093622891559 0.191576273345167 0.188501304834313 0.195794275512393 0.192595804226447 0.195784749307606 0.192607006868886 0.188501304834313 0.190617170376696 0.188694488487303 0.197490768673096 5 5 - 1373774 1374458 1374097.455 1373531 1374736 - gene protein_coding_gene TRUE TRUE AT5G04760.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G08520.1); similar to syringolide-induced protein 1-3-1A [Glycine max] (GB:BAB86892.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.39465268622809 12.3012739786353 1.33040500196502e-07 1.21437104018647e-05 15.8897086960871 14.7291722051123 1.39465268622809 0.13171735287321 AT5G58440_at 6.02281274706756 6.4223705923514 7.4278270590019 7.04644714218057 7.67613812358283 7.40580438890473 6.30577571749837 6.39575592378182 6.57842892511464 6.15099558412688 8.19608507322212 8.2388714752623 7.82967682385909 7.85071557587857 7.94470239124751 8.0293195628437 7.2867879809346 7.14790212390928 6.41919887505678 0.196349152268011 0.18151030144685 0.188030904864201 0.183043230514978 0.188906314291888 0.200259537176727 0.188841566186456 0.203517515446772 0.193000820392591 0.187138654347339 0.185371330697468 0.182003555835588 0.186321025970036 0.194412196487974 0.196692276453368 0.183385088030743 0.205283568466871 0.189975829017260 0.186017516779853 5 5 - 23641397 23642579 23642175.636 23641084 23644013 - gene protein_coding_gene TRUE TRUE AT5G58440.1 phox (PX) domain-containing protein similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07120.1); similar to Os05g0474500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055825.1); similar to Os05g0346100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055259.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73617.1); contains InterPro domain Phox-like; (InterPro:IPR001683) 1.2675042988523 12.2716647886626 1.36266680071767e-07 1.24120599568673e-05 15.8692699251072 13.9370575054598 1.2675042988523 0.107555092478914 AT5G50450_at 7.15429799092905 7.22020874485373 4.78468571560678 4.64971244405662 7.84811482171648 7.12691217975956 2.08071883774904 1.83559187111945 1.18152627464144 1.54008161729963 2.49859562618315 3.09871906068971 2.55388942054359 2.97883582791293 2.84806296365278 2.04840809272750 2.98530197761868 2.11546801147443 1.35854920173190 0.322850792983939 0.322774681934395 0.297167984823949 0.313692407454371 0.327903480448019 0.320756764386196 0.275984757189468 0.279273842757971 0.277767919839127 0.280774283293709 0.276591182403776 0.273549649253127 0.276666411833674 0.281993061867164 0.271093399483342 0.269543911294976 0.27576246908411 0.285350154188504 0.286219551594142 5 5 - 20560778 20561243 20561088.818 20560536 20561979 - gene protein_coding_gene TRUE TRUE AT5G50450.1 zinc finger (MYND type) family protein similar to zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67340.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD88375.1); similar to Os01g0921800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045230.1); similar to Os04g0385600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052618.1); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Sel1-like; (InterPro:IPR006597) 1.40525484358236 12.2686729386588 1.36597375282831e-07 1.24160975996954e-05 15.8672012053465 7.33801156930284 1.40525484358236 0.134358028565676 AT5G39610_at 9.49923214436649 9.96756193360553 10.5321441714881 10.8094141941010 11.4022268660821 10.8511338986458 8.6890824450956 8.78360574123927 9.08508824206582 9.14796023824691 10.2217134520655 8.73998528502448 11.0473854238706 10.7969537495601 7.83190061244395 10.8291512879303 10.9210068425986 10.6177264399108 8.69094431571384 0.154173700983532 0.142051459547024 0.151471807835068 0.143674944741715 0.144951781653031 0.150322427028847 0.161181162304714 0.146655684853025 0.157753200002115 0.147347744155542 0.143216825588302 0.150571645641992 0.143234422318767 0.145798591822509 0.164513394412124 0.142051459547024 0.149814404411070 0.149067153128394 0.149746073247838 5 5 - 15875850 15876474 15876071.818 15875628 15877016 - gene protein_coding_gene TRUE TRUE AT5G39610.1 ANAC092/ATNAC2/ATNAC6 (Arabidopsis NAC domain containing protein 92); protein heterodimerization/ protein homodimerization/ transcription factor Encodes a transcription factor. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. similar to ANAC059/ATNAC3 (Arabidopsis NAC domain containing protein 59), protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT3G29035.1); similar to nam-like protein 14 [Petunia x hybrida] (GB:AAM34777.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.40746141891794 12.2558957150363 1.38019531842479e-07 1.25191198102888e-05 15.8583591460202 19.6169962503368 1.40746141891794 0.135032500387647 AT5G44250_at 7.29352695521256 7.44726016989949 8.51138588470014 8.62290538722432 9.18292457894649 8.81876715715244 7.8139862754552 7.20605386695529 6.72618434663236 7.39235096132495 8.71510114286538 8.74223337377307 8.77454317733224 8.16101428091173 8.74978268306894 8.76593754108976 8.68557198639845 8.4426268730173 7.620678909107 0.178045582974532 0.168807322863118 0.16342252175916 0.165119897167868 0.169091504424704 0.174636728538409 0.170421795468601 0.176932402082197 0.181887294293017 0.168003284713756 0.164517307740339 0.16342252175916 0.167315438569692 0.177000951356042 0.163500434604295 0.165983947910978 0.174405086505239 0.175302455635687 0.166994288248951 5 5|0 -|/ 17841148 17841753 17841489 17840972 17842989 - gene protein_coding_gene TRUE TRUE AT5G44250.1|AT5G44250.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15695.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94687.2); contains InterPro domain Protein of unknown function DUF829, eukaryotic; (InterPro:IPR008547)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15695.1); similar to Protein of unknown function DUF829, eukaryotic [Medicago truncatula] (GB:ABE83368.1); contains InterPro domain Protein of unknown function DUF829, eukaryotic; (InterPro:IPR008547) 1.36349278920544 12.2499761799445 1.38683855937739e-07 1.25531158587002e-05 15.8542587524000 16.0501043451075 1.36349278920544 0.126963985951052 AT5G01010_at 9.14819969252035 9.06946318588919 9.69541225080697 9.66151718363244 9.8600667168751 9.70387983004729 8.4435541849124 8.38587606523021 7.69497270162039 7.53659038519974 8.6808682543732 8.34424219627636 8.51554153406667 8.3857231789407 8.59060402400838 8.54316674975316 8.57270234975643 8.43098304679434 7.19079007844287 0.142932072143988 0.139755371384501 0.146535837988684 0.141773261057569 0.151445938643371 0.145483203176910 0.144116515350252 0.144266598978251 0.144391406691609 0.158905177365793 0.139705155956819 0.139705880372713 0.143025792659641 0.139390859769165 0.141482026152877 0.143924445844886 0.150011266816061 0.159638080211146 0.159074547325626 5 5|0 -|/ 3613 4624 4211.6 1279 4993 - gene protein_coding_gene TRUE TRUE AT5G01010.1 similar to emp24/gp25L/p24 [Medicago truncatula] (GB:ABE93045.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD; (InterPro:IPR009038) 1.00115345409712 12.2383070316741 1.40003650523987e-07 1.26461772560425e-05 15.8461682904805 17.2370444579895 1.00115345409712 0.032407655460771 AT5G21010_at 6.1275138075698 6.40602522192388 6.96249832725233 6.9213897959974 7.4297958730583 7.11364600570335 6.11617096131899 5.82684796715659 5.25288757669668 5.77445994639957 6.99529245224442 7.14613488383721 7.14242375558074 6.83496733675619 7.13282131877265 6.77273924653959 7.13561590696674 6.35409842883867 5.68631226992535 0.220390824830905 0.211661268025894 0.213792020540073 0.217615305809512 0.221147367525000 0.218769579719732 0.210408720238538 0.219236306475279 0.230561187986084 0.208301717455918 0.207741814516483 0.212139730707073 0.209151509025438 0.224570842276797 0.207774126657128 0.207485787219564 0.225779518035486 0.218916124211470 0.211489408898833 5 5 + 7137564 7138339 7138082.091 7136011 7138683 + gene protein_coding_gene TRUE TRUE AT5G21010.1 ATBPM5 (BTB-POZ AND MATH DOMAIN 5); protein binding similar to ATBPM6 (BTB-POZ AND MATH DOMAIN 6), protein binding [Arabidopsis thaliana] (TAIR:AT3G43700.1); similar to Os07g0167200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058976.1); similar to Os03g0792500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051524.1); similar to BTB/POZ; MATH [Medicago truncatula] (GB:ABD28533.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 1.17786737309768 12.2325887200897 1.40655384158179e-07 1.26786328957763e-05 15.8422000892421 12.8682267935972 1.17786737309768 0.0887345366185589 AT5G59010_at 2.80978378025879 3.10454092338004 3.4836053457051 3.59655623080598 3.78755514720691 3.82265602038611 2.42324198277086 2.21838506969468 2.15060423300459 1.72403197859449 3.57648260068598 3.41926435337275 2.94644554086576 3.09858687045790 4.35769556011982 2.94556506517367 2.65729580639616 3.45229083733612 2.62060268707503 0.2362956581948 0.231553741178577 0.232263783889639 0.234701867995282 0.241109930621498 0.247662979996168 0.236992010543972 0.231553741178577 0.241202230591769 0.241872610491923 0.236273666625292 0.231553741178577 0.232812637795856 0.234515838539285 0.243784824739364 0.238498104365577 0.238042846439432 0.234898109514370 0.234853840364924 5 0|5 /|- 23837851 23838482 23838116.111 23837594 23840491 - gene protein_coding_gene TRUE TRUE AT5G59010.1|AT5G59010.2 protein kinase-related|ATP binding / binding / protein kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G41260.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54030.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82930.1); similar to H0913C04.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86160.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54030.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.08761447170479 12.2272203415148 1.41270241044849e-07 1.26884838308213e-05 15.8384725791211 5.89168204362225 1.08761447170479 0.0654041556439221 AT5G37380_at 6.2405055187023 6.37232856189668 7.43362605180717 7.49975945565999 7.55034399954811 7.08309646632418 6.24608615683433 6.57818414277795 5.17490718902461 5.56131891553660 6.61440702355668 7.05038242931542 6.74092369135614 6.74187465731718 6.72224596138976 6.84470928337904 6.68160650965409 6.59964042605753 5.17822867330179 0.198642105427206 0.192709939661332 0.19762558058079 0.202877727159863 0.197234530289683 0.198868453960049 0.192024209166044 0.19814944298879 0.196029124744342 0.190623147965655 0.199532597797775 0.194348995726477 0.191436295186596 0.202849805767988 0.187209088554126 0.187209088554126 0.201743766808855 0.194005871504273 0.197563971762522 5 5 - 14834420 14834823 14834635.818 14833989 14836521 - gene protein_coding_gene TRUE TRUE AT5G37380.1|AT5G37380.2|AT5G37380.3 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding / unfolded protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25560.1); similar to Aminotransferase, class-II; Heat shock protein DnaJ [Medicago truncatula] (GB:ABE78703.1); similar to Os03g0401200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050318.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.23854294337381 12.2265260878003 1.41349969448279e-07 1.26884838308213e-05 15.8379903754297 12.9026372977143 1.23854294337381 0.102433198773706 AT5G59450_at 5.99358457824893 6.2618638995218 6.76171724497376 7.12605626995914 7.56740487598122 6.87204184046397 6.1447548141779 6.0697899275416 5.58929209716604 4.66682584657539 6.97696853440386 7.37858005179409 6.74502817076438 7.20025579774857 6.61577504492175 7.09527499023699 7.11360094385014 6.72660556316139 4.86225956244472 0.203867121675458 0.190735186525842 0.199379209827592 0.201197301693970 0.207052584169706 0.197739924318651 0.200003589217134 0.190735186525842 0.217125041756759 0.197599679603052 0.19704244287463 0.200259667974046 0.196894136850568 0.200685033624509 0.200947774481988 0.192575163359385 0.208942919779106 0.196663178217036 0.202550389561304 5 5 + 23993306 23993798 23993502.545 23991894 23994017 + gene protein_coding_gene TRUE TRUE AT5G59450.1 scarecrow-like transcription factor 11 (SCL11) similar to scarecrow transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G46600.1); similar to GRAS4 [Solanum lycopersicum] (GB:ABD72960.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 1.4531793606767 12.2160608143500 1.42557758377723e-07 1.27704628639698e-05 15.8307173610656 12.6101368342780 1.4531793606767 0.144152167092390 AT5G56940_at 8.07856945312339 8.10485780255733 8.82484598761723 9.04993874729675 9.00997626525373 8.73528516465533 7.6833818800488 7.8823215422582 7.12310471769973 6.95902378334694 8.22200987330995 8.41903103403352 8.1505529271617 7.93887400137955 8.93311368839635 8.32103364532975 8.09783890663888 8.27889336594025 7.08290515148272 0.177135077505087 0.173663843729763 0.189261741845178 0.174603597036761 0.181175989234019 0.181365226397537 0.176706362148144 0.177623622123095 0.192013212927276 0.185854835802152 0.178663360617931 0.173663843729763 0.174228467321287 0.180401734611655 0.176892314873371 0.178884259970617 0.183297511012039 0.180446607991566 0.180062791731511 5 5|0 +|/ 23048106 23049373 23048862.9 23048012 23049637 + gene protein_coding_gene TRUE TRUE AT5G56940.1 ribosomal protein S16 family protein similar to SSR16 (ribosomal protein S16), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT4G34620.1); similar to Ribosomal protein S16 [Medicago truncatula] (GB:ABE93061.1); similar to Os09g0498100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063564.1); similar to Os08g0517900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062247.1); contains InterPro domain Ribosomal protein S16; (InterPro:IPR000307) 1.10394304223638 12.2068060799373 1.43635202347081e-07 1.28404514858638e-05 15.8242790439485 16.0962369292431 1.10394304223638 0.0705906111672462 AT5G61580_at 7.75228464311858 7.89462057932949 8.74650557818652 8.82892614245378 8.8711234504427 8.80767967946732 7.67085270271855 7.44697258943164 7.06617643544285 7.56557685518824 7.95548097074583 8.15166833669733 8.18484449836607 8.04835002453937 8.36255715009176 8.77529347675899 8.66757794848161 8.19755584415515 7.39483416729691 0.159452626730205 0.164611235269817 0.170542536605741 0.161046074254431 0.166587174483966 0.167745756376316 0.167473936914137 0.172617113248896 0.168642172249156 0.168631206649919 0.165076411492983 0.160379291446542 0.169606548823286 0.1596401397921 0.162965639361768 0.159452626730205 0.164346566343955 0.160911556357456 0.168973762197114 5 5 + 24780182 24780958 24780622.909 24778305 24781240 + gene protein_coding_gene TRUE TRUE AT5G61580.1|AT5G61580.2 phosphofructokinase family protein|6-phosphofructokinase similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD86939.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 1.0365481479541 12.2037141961469 1.43997134681171e-07 1.28435233101070e-05 15.8221267086392 16.069926595913 1.0365481479541 0.0493130144023978 AT5G22280_at 7.1465350752377 7.616235115096 8.60906056684528 8.3311355099147 9.12431701687742 8.38080104074438 7.17234340055016 7.24571812947891 6.00119118134646 5.9526592862945 8.33553238711207 8.3022544595243 8.07486574385511 8.2885576080196 7.19305742774101 8.64639463033024 7.3972540576652 6.29172709033623 6.18783749090243 0.289935234496348 0.281358144326914 0.288203336142968 0.294919273613267 0.290215630366719 0.300229816726515 0.286859348228264 0.290952451715482 0.31288276732943 0.296168025574964 0.281358144326914 0.282355635269850 0.291999779108071 0.289856898378962 0.295713129810388 0.281358144326914 0.327686735741703 0.309623735153730 0.293920329000508 5 5 - 7374235 7375091 7374633.091 7373998 7375722 - gene protein_coding_gene TRUE TRUE AT5G22280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44280.1); similar to Os07g0250300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059297.1); similar to Os03g0836500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051825.1); similar to unknown protein, 3'-partial [Oryza sativa (japonica cultivar-group)] (GB:AAO41143.1) 1.54254835478163 12.1999002545536 1.44444958308070e-07 1.28435233101070e-05 15.8194707791989 14.8849856043868 1.54254835478163 0.160116280229636 AT5G49400_at 5.04244255649958 5.32075906998787 5.61525747612767 5.70487557044382 6.58801896861096 6.8440723798657 4.30799262670761 4.36557963351092 4.40822367314277 4.84302054229409 5.76269629330212 5.81279492523456 5.64412682915565 5.1186998037166 5.19662528065808 5.45827194713062 5.69253063176446 5.06810639392688 4.878944821196 0.237179017759253 0.224752430355788 0.238597372090763 0.229297631897933 0.228012587104335 0.245184252166990 0.238564230469854 0.232995386357593 0.23525817267874 0.227717993566022 0.230244858832921 0.227849869065179 0.224752430355788 0.231069550813491 0.232748215722279 0.224752430355788 0.240228018532245 0.225819159934585 0.225898924311753 5 5 + 20048628 20049181 20048863.364 20047926 20049401 + gene protein_coding_gene TRUE TRUE AT5G49400.1 zinc knuckle (CCHC-type) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to Zinc finger, CCHC-type [Medicago truncatula] (GB:ABE83191.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 1.09401556399285 12.1989375008035 1.44558241947370e-07 1.28435233101070e-05 15.8188001762905 10.5632720478803 1.09401556399285 0.0679933287682702 AT5G62200_at 8.60452529366098 8.73240401495393 9.29432948277988 9.72908162112166 9.7610676032431 9.25070044160331 7.64568549702988 7.93900083790019 6.6901645553429 7.20943237469501 8.1315548534858 8.05913906372069 8.54345656693575 8.48828054230917 8.56931319826882 8.40140887189227 8.58673695363206 8.10413369398617 6.82523962324539 0.19875781511631 0.198843118101658 0.208494724906499 0.201600757448931 0.200231542179747 0.211505008351268 0.195163334566633 0.193132270527047 0.215991870966165 0.217426653628483 0.200334039866672 0.208070092622967 0.193132270527047 0.207850651327886 0.201730675198467 0.193986161257049 0.197537674633179 0.201102470003692 0.232444633887684 5 5|0 -|/ 25001709 25002829 25002132.4 25001462 25002937 - gene protein_coding_gene TRUE TRUE AT5G62200.1 embryo-specific protein-related similar to embryo-specific protein-related [Arabidopsis thaliana] (TAIR:AT2G41470.1); similar to Embryo-specific 3 [Medicago truncatula] (GB:ABE79354.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976); contains InterPro domain Embryo-specific 3; (InterPro:IPR010417) 1.36530749661757 12.1907152174669 1.45529676227845e-07 1.29033906696026e-05 15.8130702396118 16.5039902585983 1.36530749661757 0.128558874698292 AT5G62680_at 9.67503316776413 9.8682968953358 10.865463513 11.0244462208808 10.2539588805276 9.93567400942664 9.195673937292 9.42715670657077 8.3139594499625 8.71877716585684 9.85705588361073 9.40464499790532 9.54713515566533 9.50385716882279 9.43215739474425 9.74963607407262 10.1504653061879 9.9624868815043 8.16817367839523 0.124023696971052 0.113150646150493 0.116012378763927 0.118621274321287 0.117000653241466 0.122388214299105 0.123695068792266 0.116746240032222 0.145255493297785 0.117622223558337 0.113150646150493 0.117435203396841 0.113150646150493 0.114795808088308 0.129242125530328 0.113150646150493 0.130702320127114 0.118072427074157 0.137695754922981 5 5 - 25182773 25183200 25182987.364 25182363 25185169 - gene protein_coding_gene TRUE TRUE AT5G62680.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G18880.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G47960.1); similar to nitrate transporter NRT1-1 [Glycine max] (GB:BAB19756.1); similar to nitrate transporter NRT1-5 [Glycine max] (GB:BAB19760.1); similar to nitrate transporter NRT1-2 [Glycine max] (GB:BAB19757.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.13948595281369 12.1763181755754 1.47247793351795e-07 1.30290832052131e-05 15.8030254480194 19.0813295609592 1.13948595281369 0.0807102725193132 AT5G49520_at 4.41393781778946 3.41631935304103 5.30486285278042 4.76491038126646 6.29294920841367 6.60585179419366 2.01275960260860 2.08006008752331 2.02556020946246 1.85185442026313 2.77102738081343 3.05435250106600 2.19280156781766 3.19156197420502 3.12495198772326 2.17814100522565 2.55535602117903 3.45599759389158 2.01925253467003 0.285621181528416 0.271918225464456 0.289671834720044 0.284898404811591 0.288708431391928 0.295676998311346 0.271918225464456 0.273818553307230 0.283831638821298 0.286362109103673 0.271918225464456 0.277813265830376 0.278824730788350 0.282292951027735 0.283279246133908 0.282178705638740 0.273054430309893 0.285825349462135 0.290397346056500 5 0|5 /|+ 20109621 20110025 20109840.5 20108002 20110572 + gene protein_coding_gene TRUE TRUE AT5G49520.1 WRKY48 (WRKY DNA-binding protein 48); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 48 (WRKY DNA-binding protein 48) (WRKY48) [Arabidopsis Thaliana] (GB:Q9FGZ4); similar to WRKY23 (WRKY DNA-binding protein 23), transcription factor [Arabidopsis thaliana] (TAIR:AT2G47260.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE87685.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.80567118822398 12.1674138879128 1.48321456607660e-07 1.30973559957599e-05 15.7968054164335 6.75199612492978 1.80567118822398 0.203971821645990 AT5G22850_at 7.84151972118504 7.89001910842086 8.85319298408792 9.31371610134398 9.57728825956925 9.24536038490746 7.75946582678746 7.81173043130318 7.36453659809862 7.68530367998063 8.6496714745709 8.32839489929058 8.60296863292681 8.78595189709167 8.56095428138849 8.85404173140134 8.67350674586109 8.6739269444745 7.84512991788912 0.153617224549440 0.144384691616253 0.157620272926384 0.149505960640397 0.150212401896367 0.149818845251214 0.160014912680927 0.152223901146533 0.170362136825365 0.16736419524258 0.149750131428095 0.146302339982252 0.146765184913107 0.146555907944367 0.154623984311492 0.148675099660128 0.161456215325822 0.147891007212541 0.151779874540509 5 5|0 -|/ 7633615 7634552 7634000 7633440 7636570 - gene protein_coding_gene TRUE TRUE AT5G22850.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G08210.1); similar to putative aspartic proteinase nepenthesin II [Oryza sativa (japonica cultivar-group)] (GB:BAD53242.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.21561300221962 12.1555147135282 1.49769560629884e-07 1.31983486123673e-05 15.7884843345819 16.6729535061332 1.21561300221962 0.099011080266275 AT5G57880_at 2.83602834645096 2.89280027898631 3.67114470251959 3.4668424769526 3.85638989280261 3.66459911700126 2.9461768497255 2.87211907507857 2.79117785506558 2.76153436864476 3.59003552421646 4.64998432589743 4.09216035614006 4.43416157862612 4.40392861477346 4.4073031552101 4.09143437475209 4.2169499888566 3.26845603424168 0.219140225408799 0.219089831491510 0.219089831491510 0.219089831491510 0.233472627878011 0.228998933557812 0.230894115597955 0.219089831491510 0.226290820723487 0.239112504855492 0.225004973849572 0.219089831491510 0.219089831491510 0.227350590799452 0.235176822875251 0.219089831491510 0.219089831491510 0.219089831491510 0.219089831491510 5 5 + 23462707 23463582 23463154.111 23461203 23463665 + gene protein_coding_gene TRUE TRUE AT5G57880.1 similar to unnamed protein product; gene_id:MTI20.12 unknown protein [Medicago truncatula] (GB:ABE78807.1) 1.03665911512519 12.1476734668280 1.50732230896704e-07 1.32562397492293e-05 15.7829953283669 6.86382967200286 1.03665911512519 0.0511114268524993 AT5G63260_at 5.49337597169232 5.52760112058721 5.95635102222655 5.93510933567106 6.17571725405721 6.71969863944387 4.22692755888297 4.26378243118158 5.0798981624818 4.44611259398717 5.91311196094576 5.64915665739281 5.49359807124246 5.82243594086434 5.90613853415481 5.52683003368916 5.39896097799907 5.67507119311537 4.28734848059426 0.185576028373095 0.188275752024777 0.187681843471744 0.190945370002498 0.185576028373095 0.19081210270763 0.187792327627052 0.188828182055392 0.189903615906361 0.190042797877644 0.187371979124969 0.185576028373095 0.189167312281543 0.185576028373095 0.196571201167094 0.185576028373095 0.198774727235129 0.185576028373095 0.190662722196348 5 5|0 +|/ 25380889 25381629 25381272 25378976 25381940 + gene protein_coding_gene TRUE TRUE AT5G63260.1 zinc finger (CCCH-type) family protein Identical to Zinc finger CCCH domain-containing protein ZFN-like 5 [Arabidopsis Thaliana] (GB:Q5RJC5;GB:Q9FMJ7); similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT3G48440.1); similar to Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97111.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.19375356720903 12.1338897769840 1.52440819635999e-07 1.33793639787265e-05 15.7733356546712 10.6761284168161 1.19375356720903 0.0946114710196576 AT5G07360_at 6.88232749651731 7.17434196987592 8.23899836702632 8.39982197063153 7.78804814184919 7.97018296152904 4.27751907385905 4.98678525349058 5.48074130334886 4.52662853544959 5.17819757453168 5.10284144965345 5.676429907908 5.98924935521638 5.08185416500789 5.86804868545681 6.2120072019764 5.62033252372698 5.07841068731457 0.229122521129988 0.227036881011151 0.231113644441430 0.230434473050653 0.230889610245398 0.231626594928198 0.237809865254166 0.229693097963838 0.240107488136099 0.231217819662467 0.227036881011151 0.227036881011151 0.235243473102417 0.227036881011151 0.234785122601460 0.227036881011151 0.241006091996346 0.233601425310903 0.232196111316559 5 5 - 2326962 2327495 2327186.364 2326705 2330143 - gene protein_coding_gene TRUE TRUE AT5G07360.1|AT5G07360.2 amidase family protein similar to glutamyl-tRNA(Gln) amidotransferase, putative [Arabidopsis thaliana] (TAIR:AT3G25660.1); similar to amidase-like protein [Nicotiana tabacum] (GB:BAC53930.1); similar to Amidase [Medicago truncatula] (GB:ABE85659.1); similar to amidase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94086.2); contains InterPro domain Amidase; (InterPro:IPR000120) 1.41577300552683 12.1293615655498 1.53006715120023e-07 1.34019019077703e-05 15.7701592396906 12.2746099626669 1.41577300552683 0.139238398470542 AT5G35980_at 9.08901133096157 9.16945906543653 10.0098688349561 9.98782290386462 10.2632453745370 9.9376799673515 9.0484483970552 8.95168355622624 8.46779818586492 8.69871926732594 9.7319666531978 9.66519610878253 9.80876314188023 9.73843822751054 9.44116672744152 9.71791852367648 9.68902302342657 9.637295310864 8.45004385336536 0.087766534030886 0.0879664574410775 0.0902338700251683 0.0888749936959912 0.0880251818800049 0.092301985309889 0.0871996357264994 0.0914793557276975 0.0974321769961902 0.0949726460088737 0.0876821959168726 0.0875522857077009 0.0871322537122356 0.0889339921991159 0.088067598300915 0.0872165219007717 0.0896527562991181 0.0905931280259325 0.0986590505668008 5 5|0 +|/ 14150985 14153154 14151962.286 14145214 14153554 + gene protein_coding_gene TRUE TRUE AT5G35980.1|AT5G35980.2 protein kinase family protein|kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G40120.1); similar to Os02g0702500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047851.1); similar to hypothetical protein SPAC823.03 [Schizosaccharomyces pombe 972h-] (GB:NP_593830.1); similar to Os04g0602800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053776.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.06243543925141 12.1234990201423 1.53742762489044e-07 1.34137662965890e-05 15.7660446029329 18.6659397955234 1.06243543925141 0.0605231638919828 AT5G17640_at 5.87752924016672 6.28452049778534 7.11504128150614 7.11170154676744 7.5039081309378 7.6557607101087 5.6557478039899 5.5583466836205 6.44137791398408 5.77729328288163 7.5436487039298 6.44519663871945 7.22620401603055 7.09545984305223 6.56680814004854 6.61103866461766 6.82662243971363 6.70065004802835 6.1982444931718 0.166946604126261 0.165004969526837 0.165205362338684 0.161642743184467 0.16395845911479 0.162065831628126 0.175101063516594 0.164726003973100 0.166005804285761 0.161231628977761 0.164017503879005 0.168570333940410 0.160353766925542 0.16358366298999 0.165885363118937 0.163623026117958 0.164087127047138 0.167623661727502 0.163242640828869 5 5 - 5811053 5811622 5811356.636 5810937 5813286 - gene protein_coding_gene TRUE TRUE AT5G17640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10020.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19269.1); contains InterPro domain Protein of unknown function DUF1005; (InterPro:IPR010410) 1.12027426301388 12.1233547470814 1.53760924605148e-07 1.34137662965890e-05 15.7659433130113 13.1032822160837 1.12027426301388 0.0770431942066085 AT5G50870_at 8.96654272210939 9.20412313660671 10.0827817988952 10.2443366261611 10.3368401867467 10.1228664072825 9.46704902221878 9.45436018204233 8.64663792900734 8.69314802859126 9.86749855003354 9.9320471446571 9.89013777951412 9.79981653953265 9.91283396459922 9.87303595066097 9.61774579801113 9.9280696852116 8.59173521296772 0.139374098419491 0.132412417526665 0.132390578832630 0.133565263200675 0.134998523840755 0.131525777106065 0.132469630636967 0.136163621036155 0.180855589478193 0.162365159842620 0.137137234375282 0.130804869300886 0.129949877656589 0.135536243685334 0.133595348727275 0.129949877656589 0.136235723281676 0.13755084565383 0.151014702020863 5 5 - 20716855 20718091 20717530.091 20716664 20718332 - gene protein_coding_gene TRUE TRUE AT5G50870.1 UBC27 (ubiquitin-conjugating enzyme 26); ubiquitin-protein ligase similar to UBC8 (UBIQUITIN CONJUGATING ENZYME 8), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G41700.4); similar to Ubiquitin-conjugating enzyme, E2; UBA-like [Medicago truncatula] (GB:ABE89392.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 1.06624763768291 12.1119867138217 1.55199380743124e-07 1.35120668024231e-05 15.7579573648423 18.9831067936160 1.06624763768291 0.0620323610539039 AT5G61530_at 10.0935589617935 9.84647328118493 10.9182361798052 10.7488570866481 11.0071118082150 10.8099450761534 9.24789377467846 9.01752281952436 9.09633198574617 8.96943200984209 9.931797082457 9.72519515634126 9.88434802961895 10.0125055942664 9.589384025111 9.87590003150292 10.1050804290824 10.0696353777254 8.95311436173419 0.0787074215426687 0.0765851824588728 0.0801323068101242 0.0769802698584414 0.0791858726135196 0.0816450080097137 0.0828586769210486 0.0832104486415556 0.0857170419336856 0.0854360996577633 0.0782696179724964 0.0770612237758283 0.0793397518602577 0.0818371974763537 0.0831926443191643 0.0774590411383672 0.0796542901470143 0.0792902342232285 0.0829999127352562 5 5 + 24761059 24761738 24761343.545 24759274 24762010 + gene protein_coding_gene TRUE TRUE AT5G61530.1|AT5G61530.2 small G protein family protein / RhoGAP family protein similar to hypothetical protein LOC550478 [Danio rerio] (GB:NP_001017781.1); similar to Os07g0486500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059663.1); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198)|similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97162.1); similar to Os07g0486500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059663.1); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198) 1.10630662919956 12.1054539775521 1.56032623191263e-07 1.35573874147802e-05 15.753363895581 19.663961624269 1.10630662919956 0.0737639506873475 AT5G16300_at 6.07430141204992 6.25735119355369 7.14917376212847 7.13508185508778 7.11093091717582 6.96636854905678 6.01908215363239 6.09385989454038 5.82901636359206 5.32189612951051 7.06125934287596 7.02769623649796 6.37502207917158 7.01594701763805 6.77548268845717 6.51002904070827 5.92209329300678 6.8003052400584 5.7796045849191 0.181958711103567 0.176165229522738 0.173546081262137 0.182991648791378 0.180597187129051 0.183081209738745 0.177925329459725 0.180225170946843 0.180295487357845 0.173796983145957 0.173546081262137 0.187492682606655 0.173589558394738 0.188787282509875 0.175099101862191 0.182599385104884 0.197704759859285 0.181604966375408 0.181639529344840 5 0|5 /|+ 5341466 5342158 5341857.75 5338122 5342435 + gene protein_coding_gene TRUE TRUE AT5G16300.1|AT5G16300.2|AT5G16300.3 similar to PREDICTED: similar to low density lipoprotein B isoform 1 [Bos taurus] (GB:XP_593871.2); similar to Os01g0777000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044419.1); contains domain Cullin repeat (SSF74788) 1.01085689102300 12.1023733129516 1.56427246399138e-07 1.35644921479190e-05 15.7511966536295 12.7655112471410 1.01085689102300 0.0424586692839368 AT5G12290_at 6.68560215457027 6.83583481768679 7.66898820746853 7.71769736970766 7.79076786237875 7.74506768725224 6.31029303527455 5.9067904507001 5.32447879863864 4.932218849554 6.04380844371798 6.44128482758514 5.9985145841397 5.83530478935789 5.76458134114071 6.04421225385567 6.49573943975468 5.42874399450917 4.98169283968487 0.235366432755477 0.238443436059927 0.245216218047912 0.237968149748554 0.260072486580441 0.243257223459338 0.245056161826094 0.235395057779873 0.247673096707956 0.244591264576804 0.235366432755477 0.235366432755477 0.25506384465922 0.255298593524615 0.242701432904161 0.240174501900474 0.251012437342949 0.248728054572401 0.241922427986235 5 5|0 -|/ 3974684 3975770 3975323.2 3974137 3978161 - gene protein_coding_gene TRUE TRUE AT5G12290.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96236.1) 1.11153019022116 12.0959037562963 1.57259516096972e-07 1.36094430151834e-05 15.7466430690660 12.6256238007382 1.11153019022116 0.075402059286727 AT5G03200_at 6.37767940310272 6.91279516438038 7.4330015905704 7.91259255714267 8.15201882837499 8.0008983050348 4.91059309572183 5.89276420850536 4.22953388526093 4.24368095151461 5.75000442298686 5.95783992855495 6.37887532006656 6.44827000573186 5.60509763987446 6.34328668223927 6.24749642408925 6.33491143140777 4.39999472287599 0.272737911047652 0.259887542012323 0.272288045548926 0.280711587069557 0.274690186078563 0.265001547958771 0.257670984848121 0.269128714348453 0.2646690808042 0.254476193254614 0.26129077546116 0.257357751841656 0.261444749635492 0.257392923800457 0.266619426116971 0.254826731196968 0.255143820031656 0.255962633873253 0.254310146818707 5 0|5 /|- 760483 761080 760828.222 760318 761802 - gene protein_coding_gene TRUE TRUE AT5G03200.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G09770.1); similar to Os10g0204100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064306.1); similar to Os03g0254900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049589.1); similar to zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95025.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.84666136550242 12.0924449810484 1.57706442736149e-07 1.36209331364078e-05 15.7442073584288 12.1611891866472 1.84666136550242 0.212219911161632 AT5G08470_at 5.64602474464811 5.62826855965738 6.63066703787036 6.42135761237008 7.24134550810495 6.9386548536007 5.24756798557795 5.25704735885806 4.91998145726101 4.48234062186363 4.86385394953293 5.5615496534894 5.67371459608112 5.54423070451056 5.73484962332422 5.6740242180141 6.00020083618241 5.57806062003253 5.00883237912223 0.249077069802890 0.235758573984027 0.240545028350374 0.236603458036416 0.245529799976196 0.247153018456540 0.238502352115161 0.239490280028632 0.244320040192419 0.239008352279686 0.239877650818248 0.236164507282045 0.237871884282384 0.241841743727978 0.235758573984027 0.235758573984027 0.236088391862956 0.236439668329341 0.248005065261926 5 5 + 2741524 2742478 2742017.1 2735926 2743057 + gene protein_coding_gene TRUE TRUE AT5G08470.1 PEX1 (PEROXISOME 1); ATPase an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to putative peroxisome biogenesis protein PEX1 [Oryza sativa (japonica cultivar-group)] (GB:BAD09074.1); similar to Os08g0556500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062476.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.06918573159905 12.0807023398577 1.59234114576425e-07 1.37255347812442e-05 15.7359315025848 11.3176310465334 1.06918573159905 0.0637811994392413 AT5G64600_at 5.21752948881896 5.05620573413333 6.1153285018082 6.11249888987994 6.65051636938296 6.39895809840599 5.40374934015843 4.85365951299275 4.70829979718532 4.99975910221532 6.33692578917404 6.28295513110751 6.07583779004172 6.23820610235687 5.85115906830517 6.27071719771079 6.13142524224554 6.05968251516295 4.81205567951179 0.202896013856967 0.19908894248898 0.199278742811316 0.192702573861696 0.197424765028203 0.19655879317597 0.196897010206826 0.204041449773921 0.200117853005996 0.209866171946087 0.192060167635611 0.192060167635611 0.198492450869142 0.194893068310459 0.199037734724499 0.192292846236552 0.196875907338688 0.195293815090854 0.193855310238797 5 5|0 +|/ 25844305 25845057 25844555.2 25842393 25845411 + gene protein_coding_gene TRUE TRUE AT5G64600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22460.1); similar to Os12g0190100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066339.1); similar to putative auxin-independent growth promoter [Oryza sativa (japonica cultivar-group)] (GB:BAD37235.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) 1.25118242869283 12.0775507844271 1.59646855587062e-07 1.37338081071298e-05 15.7337086589877 11.2240066406895 1.25118242869283 0.108337436240926 AT5G58710_at 8.9978322034089 8.86461287149806 10.1309956323715 9.9743950960063 9.45160470651915 9.27725998565835 8.3971552786477 8.16269790718389 7.30010009996027 7.87405153735468 8.68275017433499 8.84637424123807 8.38768118563795 8.63246244828972 8.99661600245856 8.36687040765174 8.27240047460693 8.51557830242915 7.5252295890264 0.133899067695879 0.132966537324871 0.136536578851381 0.143223089886571 0.137765697419174 0.133897891713389 0.132450678227534 0.137194523138838 0.160129461107329 0.139610810582758 0.130506222384746 0.128892365319823 0.131931947910237 0.131268746759563 0.128892365319823 0.130191519380908 0.137586426907274 0.132180951106251 0.142516815953661 5 0|5 /|+ 23735882 23736694 23736236.714 23735001 23736991 + gene protein_coding_gene TRUE TRUE AT5G58710.1 ROC7 (rotamase CyP 7); peptidyl-prolyl cis-trans isomerase Encodes cyclophilin ROC7. Identical to Peptidyl-prolyl cis-trans isomerase CYP20-1 precursor (EC 5.2.1.8) (PPIase CYP20-1) (Rotamase cyclophilin-7) (Cyclophilin of 20 kDa 1) (CYP20-1) [Arabidopsis Thaliana] (GB:Q9SP02); similar to CYP5 (cyclophilin 5), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT2G29960.1); similar to putative cyclophilin [Oryza sativa (japonica cultivar-group)] (GB:BAD53621.1); similar to Os06g0708500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058535.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) 1.06206026787731 12.0719422683611 1.60384253133811e-07 1.37699223220211e-05 15.7297510755109 17.2340952418424 1.06206026787731 0.0618261755972578 AT5G18770_at 3.48972521099283 3.10893305524612 4.65934143288119 4.41212233702398 4.92953962181576 4.83844248961708 3.48570670298397 3.18037242211456 2.67337823953492 2.95161526900195 4.11050939570078 3.57455751389141 4.0207521494022 3.55035982295867 3.84043420426592 3.75532657177491 4.29789624669546 3.77949106445318 2.99547593317518 0.227852669205299 0.227409255770655 0.233758260706687 0.235790622603099 0.233291947084093 0.236166337056552 0.229386764308526 0.233882064680627 0.242747266105073 0.236004492996466 0.230963734035319 0.227260982754399 0.227604596376234 0.233819575572394 0.229861576940138 0.232848663392033 0.236908604066574 0.236495797893435 0.251930285051254 5 0|5 /|+ 6262621 6263120 6262804.375 6261354 6263438 + gene protein_coding_gene TRUE TRUE AT5G18770.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G18780.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.19317658986946 12.0664254044899 1.61113218107330e-07 1.37875199160981e-05 15.7258559085970 7.38285075160785 1.19317658986946 0.0959864908130083 AT5G50410_at 5.4371554083265 5.58610027720326 6.85921811961935 6.8680212658185 7.84622530871929 7.0450506218422 5.95304447597195 5.56468544713195 4.84837559466194 4.5662672543937 6.19192344200033 6.45231048901703 5.66647553704588 6.22487065194137 6.85052642936572 6.15449800611849 5.72253649089236 6.72303194221622 4.87081276876977 0.231050908853063 0.224276578176527 0.227253028152823 0.231249183361095 0.242275870721277 0.243347686029568 0.230661460974531 0.237757567286598 0.229174881609714 0.231145313629784 0.231033934767254 0.228134498161297 0.234784264440449 0.240426695502735 0.232848065170642 0.230033628170004 0.238329006409639 0.231630618989642 0.237286264970488 5 5|0 -|/ 20545684 20546825 20546381.7 20545425 20547053 - gene protein_coding_gene TRUE TRUE AT5G50410.1 similar to Os08g0531200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062332.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09029.1) 1.50291775557048 12.0632950745957 1.61528443751804e-07 1.37875199160981e-05 15.7236447517127 11.8999826970040 1.50291775557048 0.156225876141906 AT5G13490_at 3.82400542914924 4.16414486453259 6.16357028114392 6.73457905981614 3.81969948473058 3.84142206752046 3.08525097070895 3.56430696381518 2.87093252269694 3.08201102944964 3.89492774504050 4.80643253488007 3.26625318923390 4.10443318820598 4.13663133324815 4.72147014296949 4.41952734331407 3.97694236813240 2.45359510149916 0.308610303608544 0.298193169191069 0.308813134161455 0.310906136831260 0.298193169191069 0.304549273177493 0.298193169191069 0.304312016139715 0.304967244967894 0.304877308789855 0.298193169191069 0.306152256101587 0.298193169191069 0.298193169191069 0.301454828808122 0.300989064693622 0.312744287332243 0.298193169191069 0.298486026164535 5 5|0 +|/ 4336733 4337331 4337035.9 4335470 4337683 + gene protein_coding_gene TRUE TRUE AT5G13490.1|AT5G13490.2 AAC2 (ADP/ATP CARRIER 2); ATP:ADP antiporter/ binding|AAC2 (ADP/ATP CARRIER 2); binding Encodes mitochondrial ADP/ATP carrier Identical to ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (ANT2) [Arabidopsis Thaliana] (GB:P40941;GB:Q9FY52); similar to AAC1 (ADP/ATP CARRIER 1), binding [Arabidopsis thaliana] (TAIR:AT3G08580.2); similar to ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) (GB:O22342); similar to nucleotide translocator (GB:1908224A); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.42201917283206 12.0614855662753 1.61768998810106e-07 1.37875199160981e-05 15.7223662485454 7.88362578109879 1.42201917283206 0.141832246894527 AT5G14950_at 7.14680989682442 7.53163920276641 8.17375009086177 8.34781895116426 8.47655009384719 8.05567787050091 6.93309482253616 6.92230276272322 6.65236389384916 5.78873968190593 7.13321597447571 7.49771798909788 7.4796062729095 7.45351601115325 7.14929919393706 7.54768206200975 6.73751805780952 7.77144860648144 5.63575212449329 0.193053603516145 0.190334591557126 0.196526032586035 0.198410149829771 0.202593510683527 0.202436802762421 0.192555079512565 0.194088760467078 0.210393460298962 0.198151819202794 0.196087015935423 0.191435060547515 0.190227603839739 0.198266924700760 0.196866360522561 0.189078930470496 0.211532942362309 0.196275031319571 0.214526894416532 5 5 - 4837522 4838060 4837856.091 4837155 4841945 - gene protein_coding_gene TRUE TRUE AT5G14950.1 ATGMII/GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans. similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G66150.1); similar to MGC80473 protein [Xenopus laevis] (GB:AAH72937.1); similar to Glycoside hydrolase, family 38; Galactose mutarotase-like [Medicago truncatula] (GB:ABE79912.1); similar to PREDICTED: similar to mannosidase, alpha, class 2A, member 2 [Danio rerio] (GB:XP_689538.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Glycosyl hydrolases 38, C-terminal; (InterPro:IPR011682); contains InterPro domain Glycoside hydrolase, family 38; (InterPro:IPR000602) 1.22530976730789 12.0607926813415 1.61861213760076e-07 1.37875199160981e-05 15.7218766287511 14.3843900052699 1.22530976730789 0.103202619620259 AT5G62980_at 7.51357028516401 7.24191874894031 7.91902717482893 7.93330231326216 8.6288202338188 8.00003532197322 6.81945737384138 6.90993275437875 5.51983738386962 5.9599874286582 7.45634428352342 7.76125874597213 7.61426819061728 7.62307407565988 8.07224918174129 7.54778063842896 7.32004601179678 7.31108827689406 6.4558535907664 0.208487509961131 0.203213978308617 0.202458626684799 0.202857335503263 0.207126295738494 0.220919211855112 0.206819850906517 0.202458626684799 0.259740414889788 0.221154173388951 0.202458626684799 0.202458626684799 0.207589688286301 0.208706038248571 0.208767498458264 0.202458626684799 0.216777718136763 0.219244578784661 0.223251465857172 5 5|0 +|/ 25293668 25294230 25293911.1 25293260 25294492 + gene protein_coding_gene TRUE TRUE AT5G62980.1 dihydroneopterin aldolase, putative similar to dihydroneopterin aldolase, putative [Arabidopsis thaliana] (TAIR:AT3G11750.1); similar to dihydroneopterin aldolase [Lycopersicon esculentum] (GB:AAR23754.1); similar to Os09g0560500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063927.1); similar to Os08g0556200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062473.1); contains InterPro domain Dihydroneopterin aldolase; (InterPro:IPR006157); contains InterPro domain Dihydroneopterin aldolase family; (InterPro:IPR006156) 1.30439033910207 12.0582387569554 1.62201605837766e-07 1.37894236897701e-05 15.7200716198042 14.4041695974479 1.30439033910207 0.119589988132382 AT5G22250_at 4.53337329477803 4.91368248418478 6.32539131493967 6.64322456099989 4.86103422956387 5.25292713058841 2.22392924075018 2.69539006922945 3.01963723927684 2.63778747061811 3.05924209986442 3.40310334533747 2.71228138621396 3.23771300030026 3.39717817394858 3.1224199431053 3.40200309429119 3.09704290124644 2.07162861821279 0.234548596446988 0.235006025215144 0.249278012788019 0.241326629859585 0.235642430646643 0.254180554665202 0.230276442363007 0.234689143877269 0.247508672842160 0.233712889465130 0.231017344028673 0.227788667548979 0.239330942997151 0.241302335221585 0.227788667548979 0.23712195180125 0.248966593499047 0.234154172920879 0.229314908612856 5 5 - 7365691 7366147 7365966.545 7365535 7366781 - gene protein_coding_gene TRUE TRUE AT5G22250.1 CCR4-NOT transcription complex protein, putative similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT3G44260.1); similar to CCR4 associated factor 1-related protein [Capsicum annuum] (GB:ABG66307.1); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 1.39078621022828 12.0454182910403 1.63922154974789e-07 1.39084232097026e-05 15.7110033773215 7.55873109183314 1.39078621022828 0.136429036812738 AT5G35560_at 8.86925121484407 8.71162900171465 9.8699987462626 9.82882934981214 10.2014948819179 9.8652477381895 8.84374978864695 8.49523808714902 8.06375843612552 7.96559605782865 9.1510829983199 9.11426027647852 9.48383171366462 9.43130482100565 8.368022247867 9.3824503857767 9.10290926493927 9.16248252755768 8.11044483472269 0.145131207650782 0.142416786058348 0.147965709936913 0.145600559786565 0.144291993376062 0.144210848369592 0.143061696987715 0.147122265172764 0.159790359046018 0.151218510267375 0.144168103171582 0.143237230606639 0.145349370712235 0.150924700618797 0.155060725268722 0.142416786058348 0.144934969994659 0.142416786058348 0.152179987320706 5 5|0 -|/ 13759701 13760890 13760144.25 13759339 13765542 - gene protein_coding_gene TRUE TRUE AT5G35560.1 DENN (AEX-3) domain-containing protein similar to DENN (AEX-3) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G20320.1); similar to DENN domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93951.1); similar to Os03g0145500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048949.1); similar to Os02g0777100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048289.1); contains InterPro domain DENN; (InterPro:IPR001194); contains InterPro domain dDENN; (InterPro:IPR005112); contains InterPro domain uDENN; (InterPro:IPR005113) 1.15718445459121 12.0314217667881 1.65823242884737e-07 1.40422462747646e-05 15.7010894300275 17.9337512539055 1.15718445459121 0.0884209809919395 AT5G51260_at 6.51883916574241 6.40994049492602 7.76085009625274 7.84443906701169 8.55374817913017 8.24587616697732 7.78717843595111 8.23124432450209 6.36603576568402 6.75441859786579 8.00328714757083 7.84815398534212 8.32439041288416 8.20300488552932 7.39098504257894 8.42168909920242 8.3182876695188 7.82190501872247 6.46733830941544 0.200338642436335 0.200870339167049 0.208596470798931 0.220608889727007 0.206812325728134 0.210343641344095 0.203100651287778 0.200282501271773 0.206650532828775 0.201521568952726 0.211370197311059 0.202166687137831 0.200282501271773 0.205111841334155 0.209828762357005 0.202416633985004 0.212553119610126 0.201434294545315 0.207673632722660 5 5|0 -|/ 20849464 20850485 20849989.2 20849251 20851008 - gene protein_coding_gene TRUE TRUE AT5G51260.1 acid phosphatase, putative similar to acid phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G25150.1); similar to acid phosphatase 1 (GB:1908418A); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028) 1.18831322770473 11.9951936016192 1.70856307723517e-07 1.44297148601948e-05 15.6753611628182 14.9543780573069 1.18831322770473 0.0964809977845775 AT5G44030_at 1.48592572593106 1.86758696973389 4.67657424187881 4.66237183489669 3.91365582764563 2.90276573900668 2.53569131933336 2.17554884785198 3.03864280861121 2.42841755162684 3.87116545496299 4.34335568463833 3.26104630194329 4.39939121174018 4.50266731731431 3.98286356995975 6.72808746388312 4.23189590206209 3.42231708022722 0.248367598239197 0.248689511391062 0.244795496580893 0.243099589596827 0.226586533722526 0.239992533982598 0.234131061286577 0.225779935378724 0.226980379309145 0.235256516319251 0.225779935378724 0.225779935378724 0.227382441441211 0.243395167767619 0.238056884060235 0.225779935378724 0.247396010834991 0.251633715787764 0.225779935378724 5 5 + 17736220 17736752 17736493.636 17731872 17736950 + gene protein_coding_gene TRUE TRUE AT5G44030.1 CESA4 (CELLULASE SYNTHASE 4); transferase, transferring glycosyl groups Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Identical to Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) (CESA4) [Arabidopsis Thaliana] (GB:Q84JA6;GB:Q8GZN8;GB:Q9FNC3); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to cellulose synthase 2 [Eucalyptus grandis] (GB:AAY60844.1); similar to cellulose synthase [Populus tremula x Populus tremuloides] (GB:AAT09894.1); similar to xylem-specific cellulose synthase [Populus tremuloides] (GB:AAQ08987.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150) 1.73729349748448 11.9929338197675 1.71175714152742e-07 1.44297148601948e-05 15.6737531016174 6.71660752668548 1.73729349748448 0.197120458236567 AT5G24430_at 7.1268487844232 7.51465847766616 8.26047175847133 8.56435422268865 8.79480967644127 7.95405697688945 6.32819263981605 6.44751176847037 5.36880530145203 6.19230406056045 7.55825034424509 7.81431331780347 7.50226512182473 7.61099712289681 7.08649235320663 7.76859068745702 7.20145639744865 7.04012757244242 5.96179282238784 0.206001928866925 0.199459924390107 0.205862958083130 0.201520440901583 0.208421124412342 0.216097533960232 0.209676821786656 0.216345402867217 0.225955382923561 0.212547353724971 0.214975179017644 0.199459924390107 0.201497271687322 0.205588349155507 0.209298782536409 0.206946816621659 0.223956041847456 0.213272321187851 0.207229797590943 5 5|0 -|/ 8339406 8340854 8340223.8 8339147 8343105 - gene protein_coding_gene TRUE TRUE AT5G24430.1 calcium-dependent protein kinase, putative / CDPK, putative similar to CRK (CDPK-related kinase), calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase [Arabidopsis thaliana] (TAIR:AT3G50530.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G49370.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT2G46700.1); similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] (GB:AAL30818.1); similar to calcium/calmodulin-dependent protein kinase homolog|CaM kinase homolog|MCK1 [Zea mays] (GB:AAB47181.1); similar to serine/threonine protein kinase pk23 [Lycopersicon esculentum] (GB:AAL87457.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.57298223044711 11.9913691979003 1.71397244615518e-07 1.44297148601948e-05 15.6726394941372 14.2682525428412 1.57298223044711 0.169897297904473 AT5G43970_at 7.68893324371341 7.71491018726882 8.26458877477737 8.28896347217155 8.33718386692278 7.94420350991912 7.56778700695404 7.67936656248754 6.95801203649235 6.53925863212828 8.2678117520228 8.71408839833187 8.00671995181413 8.31614256517727 8.88053265244405 8.14695978243041 7.85664958555049 8.09157203383311 6.48910566327897 0.139279648442257 0.130859463252251 0.130974897288491 0.132680388765353 0.132704223359826 0.129203370260288 0.131175888705759 0.139093573866326 0.136662198547742 0.135639574953483 0.128320232510801 0.133606722075151 0.138105516922460 0.135050802256207 0.128048625135008 0.131471816748017 0.135311518109176 0.134304751711778 0.141321594557099 5 5 + 17710133 17710383 17710255.545 17710034 17710630 + gene protein_coding_gene TRUE TRUE AT5G43970.1 TOM22-V (TRANSLOCASE OUTER MITOCHONDRIAL MEMBRANE 22-V) Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion. Identical to Mitochondrial import receptor subunit TOM22 homolog 2 (Translocase of outer membrane 22 kDa subunit homolog 2) (Mitochondrial import receptor subunit TOM9-2) (Translocase of outer membrane 9 kDa subunit TOM9-2) (TOM22-2) [Arabidopsis Thaliana] (GB:Q9FNC9); similar to TOM22-I (translocase of the outer mitochondrial membrane 22-I) [Arabidopsis thaliana] (TAIR:AT1G04070.1); similar to unknown [Solanum tuberosum] (GB:ABB55375.1); contains InterPro domain Mitochondrial import translocase, subunit Tom22; (InterPro:IPR005683) 1.08445990103787 11.9767710165959 1.73479260903963e-07 1.45766928912238e-05 15.6622405808984 15.4093345951104 1.08445990103787 0.070963487993737 AT5G46340_at 5.62125204813431 6.15794427619143 7.29236516108395 7.35879318184895 8.38042325957645 7.4269397388439 6.14939522920134 5.70030865422216 5.21597616356697 5.14560834987949 7.22360647484603 6.99556828025563 7.38204370215416 7.55133789807751 6.37197990532678 7.59457816184076 7.4122485742091 6.67031071286393 5.51710057563442 0.271075537388564 0.264173403093041 0.294639769774166 0.270405843322899 0.274385643391251 0.292161375312401 0.278934968235058 0.268415324855333 0.293983475017245 0.268332196885537 0.273663355823933 0.264173403093041 0.264173403093041 0.272975438156757 0.279909416625927 0.264173403093041 0.286836398286074 0.274497978055364 0.266625058786322 5 5|0 -|/ 18813634 18814640 18814015.6 18813153 18817321 - gene protein_coding_gene TRUE TRUE AT5G46340.1 O-acetyltransferase-related similar to O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT2G34410.2); similar to acetyltransferase-related [Arabidopsis thaliana] (TAIR:AT1G29890.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06550.2); similar to Os05g0582100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056436.1); similar to Os01g0631100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043644.1); similar to O-acetyltransferase (ISS) [Ostreococcus tauri] (GB:CAL56376.1); contains InterPro domain Cas1p-like; (InterPro:IPR012419) 1.78235973370206 11.967245346701 1.74852657066132e-07 1.46636753041490e-05 15.6554464843192 12.982479815333 1.78235973370206 0.204999360173986 AT5G44820_at 5.8345484589496 6.2647422040986 7.55485672984208 7.54671704704583 6.66355083115058 5.87386573941721 4.06513774732205 4.00473593851915 3.77161291400933 2.77201437489377 4.18130383687707 4.34296660409544 3.96732197213469 4.60281682935272 3.80932118660657 4.13847470617074 4.2268400399947 4.74810632730143 2.88101921303895 0.218008774456925 0.21556306010035 0.218923883663070 0.219816720702585 0.218727659023999 0.214620212024258 0.215766701743529 0.218225587008553 0.216360381573034 0.220026748017220 0.215830720596108 0.214512567758947 0.217073196156213 0.216632955462041 0.222093582426684 0.213538679248713 0.214992284748635 0.223642277120705 0.217089320770194 5 5 - 18113051 18114660 18113811.143 18112940 18114812 - gene protein_coding_gene TRUE TRUE AT5G44820.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19970.1); similar to H0307D04.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66858.1); contains domain (Trans)glycosidases (SSF51445); contains domain PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN (PTHR10483) 1.48902580173878 11.9630599086940 1.75459844501063e-07 1.46861893322823e-05 15.6524591208802 9.67286572294181 1.48902580173878 0.155978214518323 AT5G49710_at 7.63248514166755 7.52029049174511 8.3979274666105 8.4567205930832 8.96546378565637 8.72913754002259 7.26715719969462 6.95504724685425 7.01224280067928 6.83000561835171 8.31028197399338 7.94227891789562 8.04890060677635 7.96370560561457 7.76729271221244 7.66885293336657 7.88679790027568 7.75977071192927 7.29736828424351 0.147271560402090 0.139180362368658 0.134955666885686 0.136323622048254 0.141769764025524 0.135816357636242 0.137575324667763 0.144257985797794 0.146497117460834 0.137467011275385 0.132539828740946 0.135758694300479 0.138447098077155 0.145815105141297 0.144821021603067 0.136738472302819 0.144312618180884 0.152381280233043 0.142555448582921 5 5|0 +|/ 20212872 20214438 20213680.111 20212636 20214579 + gene protein_coding_gene TRUE TRUE AT5G49710.1|AT5G49710.2|AT5G49710.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24590.1); similar to unknown protein [Primula vulgaris] (GB:ABB82569.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24590.1); similar to Os02g0781700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048312.1); similar to MADS box interactor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19444.1) 1.08275679775963 11.9484414140718 1.77598638585658e-07 1.48240772676603e-05 15.6420148910782 15.4730407188415 1.08275679775963 0.0712066820921126 AT5G16480_at 3.99150448074953 4.11487049298567 5.17183757584104 5.2720672177301 4.85847157449775 4.77301506548163 3.93523842243527 3.64827175015652 4.13375664169631 4.40026602305416 5.33341420125441 5.93110622398954 5.44632620454272 5.35378112073529 5.21384503634402 5.83989178551507 5.42128969697185 5.35797578558844 4.96918007268215 0.224592615988667 0.224784360991534 0.224046450867795 0.220072816597247 0.228869958207032 0.228100867696213 0.229505468874951 0.224694639189613 0.232574393442280 0.220261569174204 0.22165327337372 0.226699264158544 0.223907294833645 0.22476451921577 0.222762776480641 0.223959720718547 0.219123909229647 0.221073337123060 0.218985061667813 5 5 - 5381345 5382570 5382100.818 5381116 5382900 - gene protein_coding_gene TRUE TRUE AT5G16480.1 tyrosine specific protein phosphatase family protein similar to phosphoprotein phosphatase [Arabidopsis thaliana] (TAIR:AT3G02800.1); similar to Protein tyrosine phosphatase, catalytic re (GB:ABD28384.1); contains InterPro domain Putative tyrosine phosphatase; (InterPro:IPR004861) 1.04125637476468 11.9471357645631 1.77791040356323e-07 1.48240772676603e-05 15.6410812893560 9.46479524049063 1.04125637476468 0.0586647244640155 AT5G47650_at 6.50643424147293 6.75191515376677 8.41494780877205 8.6093474345149 8.6499275771393 8.46114618952495 8.21945845668382 8.44708935936365 8.12993517997713 7.80162532961038 9.27060012651155 8.85133615929844 8.87553976024585 8.80595525643185 8.91587705502353 8.9427150061399 8.97821664537532 9.082845482361 7.55747923884135 0.153484418627624 0.143698138445441 0.160498177203288 0.146204739659019 0.146158111802182 0.148454360225462 0.150968875152752 0.141308862493116 0.153980703345218 0.156472669002293 0.142744769377717 0.141149674860616 0.150902687105801 0.146782381326860 0.145215121294408 0.141149674860616 0.151421307873222 0.145438068119532 0.160909349189386 5 5|0 -|/ 19327625 19328595 19328143.1 19327418 19329664 - gene protein_coding_gene TRUE TRUE AT5G47650.1 ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2); ADP-ribose diphosphatase/ NAD binding / hydrolase Identical to Nudix hydrolase 2 (EC 3.6.1.-) (AtNUDT2) (ADP-ribose pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase) (EC 3.6.1.22) (NUDT2) [Arabidopsis Thaliana] (GB:Q94B74;GB:Q9FGJ2); similar to ATNUDT10 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 10), catalytic [Arabidopsis thaliana] (TAIR:AT4G25434.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64992.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG; (InterPro:IPR003293) 1.09416185997324 11.9416829959662 1.78597020734269e-07 1.48335114478472e-05 15.6371809223026 16.405066078938 1.09416185997324 0.0745354157461103 AT5G14105_at 6.85476108819509 6.82752737087414 8.21428506312904 7.99412867737877 8.21610019102839 7.6747975238872 6.43662458375014 6.25928049114097 5.51198659863509 6.05710776433388 6.37797153291852 6.98859811041473 6.90645842426014 6.83058583924876 7.06590665639034 7.23012095844595 7.5539828809356 6.40461513970413 6.13126629682852 0.221040020478269 0.214798655024464 0.224403381848162 0.223635183208446 0.225710795170151 0.224710022373688 0.216041113865122 0.216353348357470 0.230614633825386 0.224358432609784 0.213673697690174 0.213820706384988 0.219261833102408 0.214847658928658 0.211304285552053 0.216208086315996 0.217187374395379 0.23039717535603 0.230021023748594 5 5|0 -|/ 4552222 4552871 4552759.5 4551976 4553053 - gene protein_coding_gene TRUE TRUE AT5G14105.1 similar to Os05g0517800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056054.1); similar to Os03g0733000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051172.1) 1.22496960161152 11.9399760963063 1.78850136067462e-07 1.48335114478472e-05 15.6359595195711 13.7196382050341 1.22496960161152 0.105785814009216 AT5G40160_at 6.24934413089785 6.53292498879155 7.00295020564056 7.14614936196734 8.01353420228746 7.78226243652767 7.01343225484378 6.92453087348099 5.6510410792631 6.54159930209087 7.55701626911582 7.60426498347284 7.46865653228114 7.46192967696686 7.82702762518811 7.42667167318612 7.00087592140134 7.61508078364473 6.25115382737804 0.219302647356624 0.215657187972340 0.214513016004721 0.217195656485745 0.224602142374640 0.224860874036685 0.229444060287792 0.215041013779164 0.258880855580901 0.217263827607071 0.222339261459193 0.214513016004721 0.214605322147260 0.222180760948908 0.214513016004721 0.220501216394861 0.228215388968067 0.221496922397061 0.229740635046593 5 5|0 -|/ 16079961 16080771 16080427.4 16079707 16081577 - gene protein_coding_gene TRUE TRUE AT5G40160.1 EMB506 (EMBRYO DEFECTIVE 506); protein binding Encodes ankyrin repeat protein EMB506. similar to AKRP/EMB2036 (EMBRYO DEFECTIVE 2036), protein binding [Arabidopsis thaliana] (TAIR:AT5G66055.1); similar to Ankyrin [Medicago truncatula] (GB:ABD32433.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 1.07671250992433 11.9394343123779 1.78930558539132e-07 1.48335114478472e-05 15.6355717907815 13.9047019748385 1.07671250992433 0.069720669342631 AT5G64390_at 4.96378124614536 5.38469525600076 5.68556061351432 6.19525603504009 6.13657019561872 5.92384921940716 4.14034231662031 4.23000753538040 4.53184330758472 4.10235648223728 5.06032759350645 5.77418019494532 5.6763916072375 5.76239649062719 5.43022850259326 5.82659502260066 5.63596465177797 5.3309183183582 4.17856676050291 0.241196739381642 0.232926637684617 0.253187704618178 0.229820739309468 0.234291988145346 0.231817325690637 0.231971788003713 0.240934487340059 0.241278123722533 0.240287788193931 0.225429097912131 0.225429097912131 0.230511370272649 0.235219630572579 0.234522205028584 0.232486352158019 0.248604981064391 0.232068539482218 0.225429097912131 5 5 + 25763189 25763930 25763484.4 25760570 25764774 + gene protein_coding_gene TRUE TRUE AT5G64390.1|AT5G64390.2 HEN4 (HUA ENHANCER 4); nucleic acid binding encodes a K homology (KH) domain-containing, putative RNA binding protein that interacts with HUA1, a CCCH zinc finger RNA binding protein in the nucleus. HEN4 acts redundantly with HUA1 and HUA2 in the specification of floral organ identity in the third whorl. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09560.1); similar to KH, type 1 [Medicago truncatula] (GB:ABD28546.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) 1.29840277081127 11.9298548770987 1.80359049435568e-07 1.49234004590467e-05 15.6287126203311 10.2490315427896 1.29840277081127 0.121168927506218 AT5G32440_at 9.08952196812064 9.29673846552577 10.0452200913737 10.1206580257522 10.2711491274797 10.2073040706999 8.69958368128868 8.99008331570557 8.83053102765699 8.7014660943099 9.91202437782576 9.67406057339531 9.86337672081887 9.67477562718767 9.64854820291256 9.82492154928212 9.71880158967695 9.76394191611726 8.83762451505504 0.134186248445237 0.133351585843395 0.132291100391615 0.133984221269977 0.134973428126072 0.134866868963022 0.133352584834041 0.136251208695819 0.16272465793855 0.146722031270953 0.140254133239238 0.136665206111816 0.133624814731812 0.130002545880109 0.136721099811161 0.137144376237329 0.142187805777852 0.132821810676821 0.144209807809969 5 5 + 12094729 12095544 12095074.636 12094126 12095789 + gene protein_coding_gene TRUE TRUE AT5G32440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80040.1); similar to Os06g0642900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058174.1); similar to Ubiquitin system component Cue; UBA-like [Medicago truncatula] (GB:ABE77893.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin system component Cue; (InterPro:IPR003892) 1.05614170590548 11.9224788693872 1.81467420027356e-07 1.49865098600255e-05 15.6234264888236 18.8649974425729 1.05614170590548 0.0640759956828349 AT5G04670_at 4.87393337442353 5.22246445935412 5.75518971625747 5.84174931093458 6.0254915966182 5.97493627696301 4.47115564359084 4.76641267421275 4.72707345638686 4.39975204455906 5.71841394913539 5.8167845782996 5.8210091983182 5.42350182110079 5.86193323093331 6.07485591033068 6.22965806169011 5.01387857710306 4.6121763657706 0.223554285324040 0.218265419859601 0.21684426038636 0.218644816389259 0.229715218168278 0.228785181725905 0.217242340949385 0.228097135933602 0.244423492605616 0.229339814685661 0.218539129397516 0.218433808406953 0.220018999939237 0.220619314184103 0.219830253879014 0.222109244408756 0.223677011533167 0.217943386454278 0.224894868090200 5 5|0 -|/ 1338000 1338995 1338590.556 1337840 1340885 - gene protein_coding_gene TRUE TRUE AT5G04670.1 similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT4G32620.1); similar to Os01g0179500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042200.1); similar to Os02g0100200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045580.1); contains domain ENHANCER OF POLYCOMB (PTHR14898) 1.11559365712820 11.9119036660922 1.83069475404541e-07 1.50900728103702e-05 15.6158404867617 10.528752483929 1.11559365712820 0.0809294784202687 AT5G07620_at 2.27610012185094 2.20379054487624 2.0830407050152 1.88701711192591 3.62804614534836 3.31650969526017 2.13677776624364 1.76360860363986 0.819599889881998 0.656616569910861 2.95706123933193 2.34288421016729 2.56672655971225 2.78665360763661 2.1158677051463 2.11478628425171 1.26838646120100 2.39695969793804 0.438118493836122 0.206196890751264 0.197756511142479 0.204709841161756 0.202232165284444 0.211152713716956 0.208953933259529 0.204235329477728 0.199474526123222 0.202970388558740 0.21516497996223 0.197604590426379 0.197604590426379 0.201096217268119 0.202091357597296 0.199619901401964 0.200009692275781 0.202117141790495 0.208997352684803 0.209158309160837 5 5 - 2407444 2407900 2407679.636 2407402 2409067 - gene protein_coding_gene TRUE TRUE AT5G07620.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61570.2); similar to protein kinase [Capsella rubella] (GB:AAR15469.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.15706911234911 11.8934412097524 1.85903395336728e-07 1.52945903365807e-05 15.6025765233505 3.89025002271144 1.15706911234911 0.0915660513766796 AT5G44070_at 10.1011477188546 10.0831484305002 10.8887608389893 10.8888693432321 10.7080785582221 10.5094609398532 9.50722534469458 9.4135795665422 10.0939405449357 9.34602056273072 10.6689781209722 10.9567111969363 10.1754304159729 10.6712393058548 10.3717979633978 10.4866048431977 10.3801406736893 11.0107011502760 9.34682768473206 0.0723425707404268 0.0725872274234237 0.0725586200639356 0.0720844695613912 0.0723653497358491 0.0724388298671111 0.0736482057566179 0.076268492755382 0.0789457557723023 0.0744169091378242 0.0742289567804525 0.0730552934872686 0.0719598143184047 0.0751670028465572 0.0769952704979891 0.0728970224721012 0.0830113334847179 0.0715633816872115 0.074311394784406 5 5|0 +|/ 17754055 17754822 17754366.5 17751965 17755086 + gene protein_coding_gene TRUE TRUE AT5G44070.1 CAD1 (CADMIUM SENSITIVE 1) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+. similar to ATPCS2 (PHYTOCHELATIN SYNTHASE 2), glutathione gamma-glutamylcysteinyltransferase [Arabidopsis thaliana] (TAIR:AT1G03980.1); similar to phytochelatin synthase 1 [Brassica juncea] (GB:BAB85602.1); similar to phytochelatin synthase [Brassica napus] (GB:CAK24968.1); similar to phytochelatin synthase [Brassica juncea] (GB:CAC37692.1); contains InterPro domain Phytochelatin synthase; (InterPro:IPR007719) 0.983560674790285 11.8885214784904 1.86666586156242e-07 1.53026715276610e-05 15.5990377202483 20.355432204071 0.983560674790285 0.0381280216301709 AT5G35910_at 6.07696897189876 5.92960021089895 7.07039314954482 7.16265050693207 6.99958835275581 6.66266959798865 6.29780095604835 5.84251099004419 4.60992577793407 4.83809364404129 6.40295417687457 6.30169034376289 6.37026305370347 6.21530614035213 6.26588525972557 6.6591800138208 6.96077016352723 5.96602001208781 5.31323498897436 0.18258641747614 0.180004378758712 0.196414397033198 0.177568257524215 0.177873437600865 0.191670994386286 0.177568257524215 0.185553580525502 0.189991153205092 0.196483382128077 0.182105194959657 0.180336376202865 0.181928591449516 0.179504874731365 0.180124409281654 0.183784121364533 0.182405973141628 0.179412671433395 0.181170732790996 5 5 - 14047125 14047660 14047432 14046916 14052635 - gene protein_coding_gene TRUE TRUE AT5G35910.1 3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein similar to 3'-5' exonuclease/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G54440.1); similar to Nucleolar protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53938.2); contains InterPro domain HRDC; (InterPro:IPR002121); contains InterPro domain 3'-5' exonuclease; (InterPro:IPR002562); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 1.20472281404067 11.8882582944116 1.86707509477173e-07 1.53026715276610e-05 15.5988483584335 12.1618612332465 1.20472281404067 0.102531371976702 AT5G59550_at 6.1098614129349 7.17194933298795 8.00462394778225 8.39521320730868 7.91760924164216 7.91309569177439 5.42124991075464 5.83636630617486 6.32926855896687 5.30153141585465 7.69095112140271 7.95349170227897 7.3294796485868 7.43744352855137 6.87667561496911 7.48061768157838 6.9978172258192 7.57960850510486 5.64367149598732 0.245003022517476 0.235883133013505 0.236240481256361 0.237883371883927 0.234785413104041 0.246613109168278 0.249191048559424 0.239168312119275 0.236715637469248 0.248670596066794 0.234785413104041 0.237983002414255 0.237983832735265 0.234785413104041 0.246559841789672 0.234785413104041 0.23944895264249 0.240842948157706 0.239527225735913 5 5 - 24015658 24016200 24015976.091 24015485 24017019 - gene protein_coding_gene TRUE TRUE AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G46620.1); similar to Zinc finger, RING-type; Thioredoxin-related; RINGv [Medicago truncatula] (GB:ABE81988.1); contains InterPro domain Protein of unknown function DUF1117; (InterPro:IPR010543); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.79144112650697 11.8785890085163 1.88217805884899e-07 1.53973499031430e-05 15.5918876578476 13.6844550241563 1.79144112650697 0.208596039811275 AT5G35430_at 4.07510323050132 4.33309242083363 4.93144735445485 5.22862175685267 5.37746170761623 5.14491108808684 3.90203951761702 4.14619782999016 3.35191087110155 3.27259564024982 4.36420785660368 4.56606473677961 4.73315941850488 4.27508043938584 4.54123000588446 4.37753766910925 4.52043883676767 4.60108559050239 3.15266278506620 0.178670665815976 0.17507018011649 0.180237914857296 0.178666078491433 0.179757665474035 0.187520789695006 0.177133770753793 0.173556737825463 0.174548170477835 0.183309072657237 0.175493977681889 0.178717918206822 0.175944889387784 0.176441217379007 0.178776458288609 0.180061893185827 0.176552064863004 0.181013586880077 0.176194449696100 5 5|0 +|/ 13679384 13682915 13681602.579 13679168 13683245 + gene protein_coding_gene TRUE TRUE AT5G35430.1 binding similar to Os09g0123100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062600.1); similar to CCR4-NOT transcription complex, subunit 10 [Mus musculus] (GB:NP_705813.2); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.14739818203507 11.8752815794303 1.88737457522544e-07 1.54107835861001e-05 15.5895050968090 8.5205628639098 1.14739818203507 0.089682416798489 AT5G64620_at 8.40418025073244 8.75131139349675 8.0582753887108 8.3079205268827 8.66070728214748 8.82194890848176 6.30843144013449 6.58261435191311 8.06916872358059 6.60176216349351 8.72219994504296 8.63704344741304 7.78799876044309 8.42564423935564 8.95476202299087 8.39150714102453 7.15610550006714 8.74285408801489 6.30007055833863 0.195236220631573 0.192187937059266 0.199916914999807 0.196063340805163 0.192690908511171 0.189821095728338 0.209156163300767 0.215825750997323 0.191225249043437 0.207217783955473 0.189704663952018 0.189020267551393 0.192182728001781 0.191017197244085 0.196565938521464 0.191228051599404 0.201822938168052 0.192889085119922 0.218813904761161 5 5 + 25849132 25849607 25849364.455 25849060 25849728 + gene protein_coding_gene TRUE TRUE AT5G64620.1 C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2); pectinesterase inhibitor Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. similar to C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1), pectinesterase inhibitor [Arabidopsis thaliana] (TAIR:AT1G47960.1); similar to nvertase/pectin methylesterase inhibitor -like [Oryza sativa (japonica cultivar-group)] (GB:BAD09396.1); similar to Os08g0108100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060803.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 1.15625462269647 11.8564988352400 1.91718299376754e-07 1.56247500286605e-05 15.5759589791410 15.6582227969032 1.15625462269647 0.092223338363439 AT5G37055_at 4.70971626398339 4.67547187526762 5.57637979143939 5.46269735722285 6.11046323378649 6.22415634708934 3.96093386557452 3.76062580570656 4.21794985530915 4.51841200709225 5.35300037833995 4.75299509893053 4.68955287954116 4.77448417695901 5.13258685604666 5.25486242057921 4.75719123451801 4.76719158330124 4.79585604340554 0.225398035988562 0.230622608371954 0.223332831820633 0.224567774873009 0.238469708357096 0.231571464112502 0.223332831820633 0.231911470341179 0.227732774412894 0.22941637359343 0.224996033749051 0.223332831820633 0.227842396034571 0.223332831820633 0.228714915497722 0.233413526157783 0.2296964667757 0.225812612690536 0.227446981126029 5 5|0 -|/ 14658908 14659591 14659218.444 14658781 14659670 - gene protein_coding_gene TRUE TRUE AT5G37055.1 zinc finger (HIT type) family protein similar to zinc finger protein [Nicotiana benthamiana] (GB:AAW83129.1); contains InterPro domain Zinc finger, HIT-type; (InterPro:IPR007529) 0.995615503171411 11.8532411237954 1.92240495090073e-07 1.56379136112138e-05 15.5736068045306 9.78304175774008 0.995615503171411 0.0448428068712505 AT5G17000_at 7.3249827016546 7.23944355509431 8.07888440318766 8.08339541645791 7.85084262530289 7.87306753454377 7.49254652889957 7.57071183501006 5.50122756214306 6.064049762423 7.14466659366153 6.52485313886357 7.27034881943043 7.22670405543676 6.61307902007453 7.615320620874 7.55960209030974 7.18892218692819 5.84802987912157 0.198726223045762 0.192475823165815 0.192475823165815 0.200847547219337 0.197677273567808 0.192475823165815 0.192475823165815 0.196227804768250 0.253561001668037 0.206362562224626 0.200118325102022 0.200492927961339 0.203171238225357 0.193967521947874 0.207509534061218 0.196881488780774 0.199429226283314 0.192606597668811 0.231969389484821 5 5|0 -|/ 5585108 5585780 5585312.2 5584804 5587066 - gene protein_coding_gene TRUE TRUE AT5G17000.1 NADP-dependent oxidoreductase, putative similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 0.95156383542161 11.8457518582559 1.93446866903825e-07 1.57065783679687e-05 15.5681962642565 14.1629207251488 0.95156383542161 0.0204329537380176 AT5G25170_at 5.14193580175347 5.45411821636842 6.15210363022485 6.30075135414334 6.9359467705226 6.39993778949766 5.10862718257157 4.9863364175602 5.24789151741438 4.88860487271723 6.77160754707306 6.57958892870547 6.05170247143605 6.56003747689664 6.43535487691011 6.07192501490221 5.55939825163128 6.45497476100247 5.1472324363264 0.199125681376508 0.195661847517969 0.202274715305050 0.20144087078293 0.199687450018449 0.204314124738773 0.196454843774184 0.194975234904957 0.200935754784814 0.193880129265132 0.199969776077523 0.193791395320265 0.193851815473848 0.198366591613250 0.200217988775123 0.200969386966943 0.199123734541966 0.204663033408606 0.194711563686303 5 5|0 +|/ 8693325 8694321 8693844.9 8693140 8695098 + gene protein_coding_gene TRUE TRUE AT5G25170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25190.1); similar to hypothetical protein 25.t00041 [Brassica oleracea] (GB:ABD64953.1); similar to Os03g0198500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049279.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic; (InterPro:IPR008580) 1.24521393605868 11.8347334734599 1.95236708934554e-07 1.58222717236088e-05 15.5602284279173 11.5125446161081 1.24521393605868 0.112394263328842 AT5G48020_at 8.16716637240483 8.1200570551064 8.85187421526112 9.03829175679092 8.94196221928176 8.69476801193778 8.26039737375147 8.3320306330796 6.9599423875924 7.68409129548772 8.94622878057893 8.87535408669726 8.87253728979551 8.89825654538565 8.78878145355048 8.84887132636757 8.67845300357677 8.66719199562297 7.6755086710662 0.158499761091740 0.158324940573881 0.169052921199909 0.159740375104492 0.165508100413924 0.168546149796195 0.17165054419572 0.162160263018257 0.174944975653056 0.164085512789970 0.163958058931066 0.157780997154105 0.158933941712622 0.159254230803868 0.158234048435428 0.158913524062146 0.16229236074803 0.163211796059951 0.162963858711660 5 0|5 /|- 19480133 19480774 19480369.875 19479884 19482183 - gene protein_coding_gene TRUE TRUE AT5G48020.1 similar to hypothetical protein DDBDRAFT_0189346 [Dictyostelium discoideum AX4] (GB:XP_647101.1); similar to Os02g0717500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047933.1); contains domain no description (G3D.3.50.60.10); contains domain Clavaminate synthase-like (SSF51197); contains domain FE(II)/ ASCORBATE OXIDASE SUPERFAMILY (PTHR10209) 1.02196152552355 11.829442979031 1.96102500267218e-07 1.58627866655187e-05 15.5563993886961 16.6817218354912 1.02196152552355 0.0555952988789387 AT5G09960_at 8.32013389630746 8.44253849407585 9.34093278576087 9.30968422365766 9.53019931797629 9.55437896037662 8.53904764224864 8.57678709632287 7.96985561217561 8.08934485273264 9.3410672640648 9.0727340795667 9.02728675849113 9.1140437841752 8.9034852591632 8.96661764130916 9.074686501986 8.54775184571876 8.13173011004153 0.103755221310765 0.100281626249855 0.106117862645969 0.107766154625428 0.0986478817262926 0.106153370108039 0.1028553710399 0.102895560887279 0.115877563208209 0.121587431629656 0.100856222989453 0.099272680225221 0.108038175299457 0.106828374388771 0.0996013105632256 0.0992607434375444 0.107903211381182 0.110988594935977 0.117252934050868 5 5|0 +|/ 3107122 3107339 3107242.6 3106321 3107830 + gene protein_coding_gene TRUE TRUE AT5G09960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64850.1); similar to 4D11_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67518.1) 0.953243828265136 11.8249627910158 1.96838951738940e-07 1.58878118540854e-05 15.5531551547964 17.4865141354871 0.953243828265136 0.0231972529141544 AT5G12230_at 6.00043015253116 6.0102740411153 7.4360830881818 6.84237966785288 7.78018227377147 7.8752458585222 5.93416701428025 5.28764604200795 5.13954948550195 4.7967041946431 6.67352976359122 6.19671636197373 5.98748687514446 6.14903658657404 5.79788990066563 6.22368089280041 6.48013057590231 5.8435365932663 4.87352946214471 0.222757665136500 0.22093177293712 0.226295899199913 0.225954118111494 0.215057656416879 0.216490826868350 0.218054108257273 0.221795941537717 0.240509240512112 0.233794168100712 0.215057656416879 0.220624447351664 0.223183241488635 0.219157676647501 0.219163375248666 0.215057656416879 0.228449539666988 0.215057656416879 0.228138447031216 5 5|0 -|/ 3954397 3955067 3954857.3 3953149 3956186 - gene protein_coding_gene TRUE TRUE AT5G12230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19480.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22085.1); similar to Os12g0614000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067267.1) 1.45387498628747 11.8231078147896 1.97144752388333e-07 1.58878118540854e-05 15.5518114667445 12.1985986795344 1.45387498628747 0.152799242958885 AT5G27400_at 6.4051324966835 6.55285877072001 6.95819248208101 7.04262766846524 7.9955215605512 8.03635776861254 5.67600548786972 5.72745378138214 6.87931908170403 6.29073753702664 7.24086441337165 7.32681210504289 7.11843636352223 7.32892531726757 7.10258535216735 7.3410485901614 7.00823655377138 6.98578003724733 6.83651776713878 0.184351995203216 0.170709581725555 0.170135980579968 0.179106560530185 0.176122351569131 0.185221631388285 0.185050162167302 0.177129732736760 0.176068328887749 0.168422067282781 0.175468207749028 0.178779632447653 0.174466907151055 0.174903960500017 0.169309392310553 0.171804887868075 0.178828538590203 0.177376948421251 0.171619750685925 5 5 + 9677483 9678233 9678007.545 9676337 9678506 + gene protein_coding_gene TRUE TRUE AT5G27400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73320.1); similar to hypothetical protein MtrDRAFT_AC150244g5v1 [Medicago truncatula] (GB:ABD32378.1); similar to Os05g0143200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054614.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain UNCHARACTERIZED (PTHR23109) 0.96527009935474 11.8176944725114 1.98040123808271e-07 1.59211140505972e-05 15.5478887129756 13.7244908621417 0.96527009935474 0.0315638023100999 AT5G62880_at 6.56182149228588 6.70839194223212 7.54427680638701 6.89894741444306 8.37782010357953 8.25166255900715 6.68449563639408 6.23785610932244 6.21061859648027 6.05771912632786 8.045796884815 7.89882961855807 7.79830299376481 7.51118794433466 7.88028882568341 7.25284311206756 7.24580436051426 7.36037735625699 5.96851198667621 0.181395872591002 0.173713651621665 0.173713651621665 0.177234983133431 0.176370733054878 0.173713651621665 0.177004122633152 0.187962981018702 0.18758842095655 0.180965686947964 0.175815240250871 0.176263009388138 0.173713651621665 0.183796987990236 0.183638485951359 0.176066237503151 0.173713651621665 0.179380057988425 0.174216758273181 5 5|0 +|/ 25254518 25255671 25255117.778 25254360 25256394 + gene protein_coding_gene TRUE TRUE AT5G62880.1 ARAC10/ATRAC10/AtROP11 (rho-related protein from plants 11); GTP binding A member of ROP GTPase gene family. Identical to Rac-like GTP-binding protein ARAC10 (GTPase protein ROP11) (ARAC10) [Arabidopsis Thaliana] (GB:O82481); similar to ARAC8/ATROP10/ROP10 (rho-related protein from plants 10), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G48040.1); similar to Rac2 [Gossypium hirsutum] (GB:AAX77218.1); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras small GTPase, Ras type; (InterPro:IPR003577); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.38263220481673 11.8161740342455 1.98292400751438e-07 1.59211140505972e-05 15.5467865338268 14.0097234030368 1.38263220481673 0.139878652880366 AT5G11690_at 3.26484367337425 3.6261993928391 4.58813280913826 4.88191775391036 4.91454703051098 4.87622687133099 4.32532975387756 4.07213537084252 4.01886063522358 3.86857207524217 5.63673130552295 5.65581092003333 5.44387957490652 5.63585071644986 5.83611085816142 5.22451616079777 5.33242263765352 4.99238909472919 4.59741996261266 0.238474526565242 0.230839074454040 0.242141427529279 0.234005007032418 0.227075148882620 0.228424904483593 0.228202435319345 0.240525622568843 0.255470776136282 0.23373469679414 0.231593531794984 0.233731363606502 0.231863389440120 0.242841629647549 0.234599467723496 0.227075148882620 0.232785443155029 0.229169085274483 0.233530357164821 5 5 + 3761783 3762136 3761961.364 3761245 3762347 + gene protein_coding_gene TRUE TRUE AT5G11690.1 ATTIM17-3 (Arabidopsis thaliana translocase inner membrane subunit 17-3); protein translocase mitochondrial inner membrane translocase similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), protein translocase [Arabidopsis thaliana] (TAIR:AT2G37410.2); similar to unknown [Solanum tuberosum] (GB:ABA81866.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) 1.15058770966415 11.8091799775568 1.99457393627428e-07 1.59846543256568e-05 15.5417142165916 9.13433231509031 1.15058770966415 0.0919738537007661 AT5G59460_at 5.41925443619645 5.890713226204 6.64466035668201 6.88662232259525 7.49273136661601 7.16745394787775 5.6816122522332 5.64914400978344 4.85709762827156 4.43883930707296 5.90266374642578 6.05915072930245 5.5777672667117 5.88408943340481 6.01509914317605 5.97008966227991 5.53252559375373 5.80827502716221 5.07572607193808 0.228953191478848 0.234660764293121 0.247376376077595 0.23378254736052 0.232723543961545 0.238714274243408 0.234304769079491 0.232984865119357 0.230320798681235 0.233883905758250 0.227302078808913 0.229101207956454 0.226845481048950 0.233202519341837 0.228387231918157 0.230422786246719 0.234815887524896 0.234058790965186 0.226845481048950 5 5|0 -|/ 23994213 23995093 23994642.5 23993949 23995625 - gene protein_coding_gene TRUE TRUE AT5G59460.1 scarecrow-like transcription factor 11 (SCL11) similar to unknown [Solanum tuberosum] (GB:ABB02621.1); contains domain FAMILY NOT NAMED (PTHR13582) 1.22041962842735 11.8070054290256 1.9982112193769e-07 1.59846543256568e-05 15.5401364050932 11.6711549452925 1.22041962842735 0.107750477928502 AT5G63940_at 5.6876716435082 5.72172101734941 6.10532290031726 6.24968331402057 6.23405899371311 6.50072836095107 5.48817189552986 5.45766597870892 4.3977771548863 4.31942762405954 5.32188448660375 6.44825268039176 5.46247314638068 5.69273117077285 5.91682243126236 5.96739008536688 5.59658793657306 5.36277435721998 4.42505078450698 0.198619739959058 0.200266074044377 0.194489561721907 0.195314762383347 0.199428661719923 0.199955899310721 0.198378451835769 0.195548457047126 0.201594675985082 0.200658984992897 0.193709408515078 0.193709408515078 0.199451912341858 0.199172221333753 0.195420790076610 0.196359560756967 0.198950880827203 0.193709408515078 0.201684948561873 5 5|0 +|/ 25607546 25608356 25607951.444 25605301 25608684 + gene protein_coding_gene TRUE TRUE AT5G63940.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G21590.1); similar to At5g63940 [Oryza sativa (japonica cultivar-group)] (GB:AAX96058.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.01200172040677 11.7964405572801 2.01598567391204e-07 1.60625391445363e-05 15.5324656101105 10.9815612086651 1.01200172040677 0.0530695345211792 AT5G07220_at 8.81496726664821 8.82467911044046 10.1469506439501 10.2664530632556 10.3659905201200 10.2322795601259 9.45538898185459 9.41345224083706 9.36789354296699 9.03474275323267 10.3680665525772 9.56810377233147 10.1664465360403 10.1723675160803 9.36769992720683 9.77436950741443 9.97765886133616 9.6565999202804 8.83575033759447 0.113010135923994 0.110552869260108 0.107368387344080 0.108832554095250 0.108808575709319 0.108755657062795 0.108037720711944 0.108871333697229 0.116583370585987 0.127915188781180 0.107368387344080 0.108472724176796 0.108735987458212 0.108394714929702 0.112501117052211 0.107368387344080 0.110264245189263 0.108434455407433 0.135427233821991 5 5|0 -|/ 2265558 2266222 2265811.4 2265257 2266968 - gene protein_coding_gene TRUE TRUE AT5G07220.1 ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3); protein binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2), protein binding [Arabidopsis thaliana] (TAIR:AT5G62100.2); similar to Ubiquitin; Apoptosis regulator Bcl-2 protein, BAG [Medicago truncatula] (GB:ABE86297.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71291.1); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.963874204905744 11.7931465210442 2.02156271804641e-07 1.60625391445363e-05 15.5300721833246 19.1704583161155 0.963874204905744 0.0319155494035748 AT5G35080_at 7.06129707534396 6.94179444485154 8.24604377381452 8.08428468569618 7.9230129394521 7.46518235212103 5.51231742931173 6.08168281801406 5.57900790085577 4.63809071182686 6.74501374632545 6.32048461657867 5.97645998127644 6.69241065465115 6.36663960390763 6.3526198039806 5.50059630891339 5.73810022226583 5.00530483365058 0.264868430625758 0.254323936262650 0.270895072441850 0.266336522386362 0.256625752830647 0.284259303280682 0.2612406088262 0.261251627895842 0.265279369499283 0.258834470200164 0.257385102602096 0.265896544468080 0.261357942870436 0.254323936262650 0.259769426211335 0.254323936262650 0.289243544920926 0.259129302541104 0.254323936262650 5 5|0 -|/ 13371862 13372642 13372299.125 13371503 13374047 - gene protein_coding_gene TRUE TRUE AT5G35080.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD37440.1); contains InterPro domain Mannose-6-phosphate receptor, binding; (InterPro:IPR009011); contains InterPro domain Glucosidase II beta subunit-like; (InterPro:IPR012913) 1.33388206550848 11.7917122412970 2.02399630223516e-07 1.60625391445363e-05 15.5290297858655 12.8072894894999 1.33388206550848 0.131137608119046 AT5G60410_at 8.03897353041893 8.06693771833339 9.07477515593762 8.9622928530012 9.23324144237993 8.85242732391319 8.23268263794887 8.10571456172431 6.57345556901855 6.94750606265557 7.80416752831472 7.75143120184514 8.25118482362888 8.02893936586146 7.56920211012224 8.26869706960223 8.21836369243954 8.0274492209288 6.77460108682958 0.149335702960795 0.147810010072394 0.150620740338292 0.151884644779242 0.152858188869213 0.148485188068510 0.149764522566731 0.150755593952273 0.174646150599142 0.161937621276354 0.151457991885735 0.151378703673990 0.148041734848702 0.147910967049379 0.150761651500333 0.147810010072394 0.157240824202383 0.148948062310832 0.165172773833237 5 5|0 +|/ 24314489 24317852 24316391.625 24312116 24318373 + gene protein_coding_gene TRUE TRUE AT5G60410.1|AT5G60410.2|AT5G60410.3|AT5G60410.4 ATSIZ1/SIZ1; DNA binding / SUMO ligase|ATSIZ1/SIZ1; DNA binding Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Identical to E3 SUMO-protein ligase SIZ1 (EC 6.-.-.-) (SIZ1) [Arabidopsis Thaliana] (GB:Q680Q4;GB:Q56YS2;GB:Q56ZS1;GB:Q67ZL3;GB:Q9FKK4); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G41580.1); similar to putative protein inhibitor [Oryza sativa (japonica cultivar-group)] (GB:AAO38837.1); similar to Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABD33066.1); similar to DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89544.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) 1.07217444272996 11.7889328497909 2.0287212545128e-07 1.60625391445363e-05 15.5270093494233 15.9484391276709 1.07217444272996 0.0723059061214815 AT5G21105_at 5.7657394377731 6.19215125110004 6.10544213582827 6.4465639644202 6.59697247424036 6.80536527856834 5.96146379378815 6.45025707407792 6.07144642982659 5.37539455600494 8.22438698083644 8.1964554884874 7.93864276611935 8.06462749769451 8.5079070900046 8.14645006384227 7.76829311984135 7.89608677890536 5.99790639388948 0.237163205354461 0.202502766362654 0.210363780463614 0.208075005261811 0.204473375519799 0.220415928178337 0.206854511525660 0.206044275711502 0.230204183871055 0.230481579267385 0.209368513777233 0.215720396067689 0.21171742342515 0.214121798754228 0.212741100939901 0.208677043035550 0.220874527585663 0.221287534136199 0.232155457122053 5 5 + 7176845 7177385 7177073.636 7172752 7177844 + gene protein_coding_gene TRUE TRUE AT5G21105.1 L-ascorbate oxidase/ copper ion binding similar to L-ascorbate oxidase, putative [Arabidopsis thaliana] (TAIR:AT5G21100.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20933.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20931.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20932.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 1.33706175202778 11.7869911247180 2.03202929788993e-07 1.60625391445363e-05 15.5255974922713 13.2443804344529 1.33706175202778 0.131855567631724 AT5G41810_at 7.46060131549263 7.70357505067433 7.94154347425666 8.11378941851992 9.17066665970789 8.64015494695963 6.89472707440154 6.84985086267328 6.29598369086041 6.37869250128208 7.46844662122127 8.38638161152965 7.46626306947998 7.57266185926453 7.63271859724271 7.55478044592294 7.2092280323181 7.45591830612261 6.57382247863507 0.199108399186639 0.185552411364274 0.174682908001797 0.183922774240451 0.184595518781836 0.197701423754951 0.181065984828389 0.180166885817588 0.190054210647835 0.194713755754278 0.182743112579914 0.182298971539409 0.176184240308966 0.179026571475910 0.177379745635657 0.174682908001797 0.189197885216208 0.184134570129117 0.183346947787118 5 5 + 16756199 16756677 16756480.091 16755290 16756891 + gene protein_coding_gene TRUE TRUE AT5G41810.1|AT5G41810.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64340.1); similar to Avr9/Cf-9 rapidly elicited protein 194 [Nicotiana tabacum] (GB:AAG43553.1) 1.20824182167289 11.7864942918628 2.03287667580706e-07 1.60625391445363e-05 15.5252361915051 14.8515966210759 1.20824182167289 0.105572061561527 AT5G05730_at 9.97686890749564 10.1798346162415 10.4399317781327 10.5746452973993 10.2406970455334 9.87191485896459 7.6725349271553 7.91668592825095 8.7772029400527 8.70437513026343 9.7383560170284 9.9663861510601 9.2338654181822 9.55745312544353 9.72141904659316 9.52110961067724 9.09668361252126 9.67874939495832 8.47117968954409 0.104775006885293 0.0995657481472638 0.102362628423457 0.0994848522651031 0.103000610131953 0.103410651223420 0.113638855544100 0.111415519287367 0.110492046837299 0.099197578097214 0.102069940152996 0.100579923201290 0.0988015639830271 0.0988015639830271 0.10152883483182 0.0988015639830271 0.111712018177975 0.103555030167683 0.113690573936510 5 5 - 1719754 1720339 1719962.727 1719574 1722904 - gene protein_coding_gene TRUE TRUE AT5G05730.1 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1); anthranilate synthase ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. Identical to Anthranilate synthase component I-1, chloroplast precursor (EC 4.1.3.27) (ASA1) [Arabidopsis Thaliana] (GB:P32068); similar to anthranilate synthase, alpha subunit, putative [Arabidopsis thaliana] (TAIR:AT3G55870.1); similar to ASA2 (anthranilate synthase 2), anthranilate synthase [Arabidopsis thaliana] (TAIR:AT2G29690.1); similar to anthranilate synthetase alpha subunit [eukaryotic synthetic construct] (GB:BAD90675.1); similar to anthranilate synthase alpha 1 [Camptotheca acuminata] (GB:AAU84988.1); similar to anthranilate synthase alpha subunit (GB:AAA74901.1); contains InterPro domain Anthranilate synthase component I; (InterPro:IPR005256); contains InterPro domain Anthranilate synthase component I, N-terminal; (InterPro:IPR006805); contains InterPro domain Anthranilate synthase component I and chorismate binding protein; (InterPro:IPR005801) 1.12932484699647 11.7859061093236 2.03388035305114e-07 1.60625391445363e-05 15.5248084361823 18.7167251950691 1.12932484699647 0.0873802375660127 AT5G27280_at 9.97773200776335 10.1631904417248 10.7081015533780 10.7514793044404 10.7290633817799 10.7085830889720 9.38057562199805 9.80211256540808 9.1160786866908 9.24043372059637 10.6744736976129 10.1677454372484 10.4928828873632 10.4813657050702 10.2443663733461 10.1864200510628 10.2445533909112 10.4666467331754 8.83340543781162 0.119160190890097 0.112684939125999 0.115521119787259 0.116844073843523 0.115825240230302 0.119049397953601 0.118026423695441 0.112684939125999 0.12519122153396 0.125771277187470 0.115653207492028 0.117033888780798 0.112684939125999 0.123030170309561 0.118245364770403 0.112684939125999 0.117382865170354 0.119815558808727 0.129396967046388 5 5 + 9617626 9618263 9617984.364 9617489 9618484 + gene protein_coding_gene TRUE TRUE AT5G27280.1 zinc finger (DNL type) family protein similar to zinc finger (DNL type) family protein [Arabidopsis thaliana] (TAIR:AT1G68730.1); similar to Os06g0724400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058612.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61688.1); contains InterPro domain Zinc finger, Zim17-type; (InterPro:IPR007853) 1.09995250451324 11.7776983138944 2.04794256889538e-07 1.61159556350824e-05 15.5188365675704 19.9941611121031 1.09995250451324 0.0801281024535517 AT5G59700_at 4.14329866353693 5.00877003328396 6.77394162666959 6.70257144010209 6.81602803139597 6.4211382241732 5.63370207533759 5.7144578306093 3.99760466163996 4.25139215258346 5.16864198709778 5.03038720185394 6.0060655077018 5.98325549315291 4.64426144532931 6.32593995681967 6.73543617268697 5.24663926993538 4.21439058823241 0.192031365381434 0.187409791382056 0.182803538838508 0.176670187115659 0.178426991674465 0.186164847905122 0.180106268712714 0.179959205601001 0.203243320173143 0.197877665153558 0.182724072979107 0.182743870193380 0.183068576881004 0.176471158033315 0.185441690771113 0.17818063308842 0.184663591971242 0.192738655395186 0.18042539223138 5 5 - 24069851 24070414 24070143.636 24069611 24072651 - gene protein_coding_gene TRUE TRUE AT5G59700.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G39110.1); similar to receptor-like protein kinase [Catharanthus roseus] (GB:CAA97692.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT07653.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.52073929586511 11.7776194898409 2.04807812797301e-07 1.61159556350824e-05 15.5187791914350 10.8002589140423 1.52073929586511 0.165680645080635 AT5G58920_at 6.62009154827483 6.71368275844177 6.96443129672535 7.39039161317482 7.8346198766485 7.67666755923599 6.35449923858081 6.45545879211964 5.4553987967147 5.91132094464895 7.19089155954597 7.16748615352884 7.10096075089817 7.07732519865332 6.81035754531735 7.14592294817044 7.60044295180862 6.6895796034635 6.07429516355511 0.202008035337045 0.195568385741390 0.200905092501462 0.205619811292719 0.20544008266995 0.204246332524615 0.197647518221078 0.196975903394176 0.208338205759797 0.198876377871027 0.200017316078799 0.195568385741390 0.203221743354994 0.214261692903516 0.199523739087851 0.19601164294602 0.202880901048662 0.201827135543395 0.206673400521765 5 5 + 23810802 23811100 23810941.818 23810355 23811471 + gene protein_coding_gene TRUE TRUE AT5G58920.1 similar to Os01g0362000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043026.1) 1.10739685302113 11.7740001476408 2.05431308429048e-07 1.61337362804591e-05 15.5161441560417 13.4570015723483 1.10739685302113 0.0821496288875868 AT5G61460_at 2.3771929660155 2.91012953038014 4.29262561814394 3.77329580126464 4.03721101421391 3.85753898667227 2.26991262631492 2.15426239538966 1.44842178352371 2.27070583910763 2.35352221421458 2.97296208531954 3.44690139505205 2.84760567465731 2.71402838999897 3.31141769117553 3.48634761544447 2.83464748961558 1.87722918676817 0.236265708535322 0.233272292132377 0.253915542260907 0.235402526690240 0.236466097253482 0.241182117914017 0.236299113452486 0.247974645521998 0.246200308037039 0.239767617646228 0.233272292132377 0.235494703318436 0.238482051854210 0.237263039572558 0.236919102145780 0.234743415632424 0.245785423261881 0.239199561109758 0.240261861105384 5 5|0 -|/ 24731979 24732820 24732339.778 24731302 24739166 - gene protein_coding_gene TRUE TRUE AT5G61460.1 MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding Encodes a protein closely related to the structural maintenance of chromosomes (SMC) family involved in structural changes in chromosomes. similar to structural maintenance of chromosomes (SMC) family protein [Arabidopsis thaliana] (TAIR:AT5G07660.1); similar to SMC6 protein [Oryza sativa] (GB:CAD59413.1); similar to Os09g0121000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062596.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.34638513759177 11.7719927953543 2.05778000365567e-07 1.61337362804591e-05 15.5146822864530 5.63971178691667 1.34638513759177 0.133978497554787 AT5G59710_at 6.40853290443708 6.6633548429324 7.87796646193406 7.93172045341898 8.18812011470265 7.87596020119152 7.25769760678031 6.75930661287867 6.37936200399343 6.12369046273784 7.40629075317713 7.49104634243336 7.70077559391563 7.23740228502364 7.64305551869801 7.92973443022159 7.43530976444484 7.47345739693217 6.30676254283677 0.219568153878383 0.196600469871526 0.204419791576692 0.201355978485453 0.194836250511082 0.218738860966500 0.205493397138974 0.203798703599274 0.211872475860576 0.198096387656442 0.198306273616482 0.199352284852588 0.205596729507788 0.212745589278715 0.207852682690371 0.197754311130828 0.205623930951127 0.201606786787351 0.202057334591023 5 5|0 +|/ 24078003 24078938 24078302.5 24074633 24079144 + gene protein_coding_gene TRUE TRUE AT5G59710.1 VIP2 (VIRE2 INTERACTING PROTEIN2); transcription regulator Encodes a protein that interacts with the Agrobacterium VirE2 protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07705.2); similar to NOT2/NOT3/NOT5 [Medicago truncatula] (GB:ABE93791.1); similar to NOT2/NOT3/NOT5 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98742.1); similar to VIP2 [Nicotiana benthamiana] (GB:AAY15746.1); contains InterPro domain NOT2/NOT3/NOT5; (InterPro:IPR007282) 1.23295724506890 11.7674070010515 2.06572408316979e-07 1.61667860302385e-05 15.5113414910773 14.2751185733487 1.23295724506890 0.111302687932726 AT5G54900_at 8.4717037831983 8.40742150278037 9.67664037060888 9.53278342852055 9.28372936205072 9.29735615239857 8.88112868404742 8.91914143718203 8.26655128672174 8.27653460250298 9.42596368079335 9.45126266157031 9.20015599618271 9.2506832569705 9.8188803818375 9.21673622858829 9.25324173321474 9.3939758074900 8.18745001771919 0.102412929806465 0.107484591820183 0.104727558184944 0.109404338630058 0.104558543207337 0.10750444408979 0.103595973425585 0.105419958619853 0.112626181125588 0.120143508139775 0.105435170377216 0.102190605729299 0.107589972731513 0.108741752306977 0.105383032208109 0.102190605729299 0.113400035332838 0.105200119049997 0.117883637587541 5 5|0 +|/ 22313470 22315218 22314852.375 22312609 22315572 + gene protein_coding_gene TRUE TRUE AT5G54900.1 ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding similar to RNA-binding protein 45 (RBP45), putative [Arabidopsis thaliana] (TAIR:AT4G27000.1); similar to RNA Binding Protein 45 [Nicotiana plumba (GB:CAC01237.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.955314487971135 11.7639726675464 2.07169530996347e-07 1.61843045461176e-05 15.5088384926539 17.8686753087545 0.955314487971135 0.0281487601976862 AT5G49930_at 8.0361211150474 8.1362844989161 9.11286591667026 9.1686451042716 9.21264391156567 9.0348426830505 8.00891389929678 7.86537236489532 7.40847971347142 7.52102606875701 8.45463993489928 8.53086591629728 8.25969309895325 8.43540914238401 8.33930724925474 8.57016865232058 8.43212306439025 8.40236676201618 7.80130656609096 0.140797443113565 0.138255868550383 0.139749324427199 0.139851216360635 0.138255868550383 0.139050141429845 0.144149875502926 0.146588227963899 0.162065532189615 0.154738223950798 0.139043801413011 0.141298743915991 0.138323270706087 0.151461145674712 0.142705984995758 0.141544493484582 0.142649467130248 0.145394443633405 0.141205968360541 5 0|5 /|- 20325536 20326185 20325785.6 20325261 20330034 - gene protein_coding_gene TRUE TRUE AT5G49930.1 EMB1441 (EMBRYO DEFECTIVE 1441); nucleic acid binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to serolo (GB:XP_863424.1); similar to PREDICTED: similar to serolo (GB:XP_877430.1); similar to PREDICTED: similar to serolo (GB:XP_851229.1); contains InterPro domain Protein of unknown function DUF814; (InterPro:IPR008532); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.98585535623763 11.7538821352982 2.08934848376801e-07 1.62928565229729e-05 15.5014791245696 16.5744657752163 0.98585535623763 0.0442429639906768 AT5G01880_at 6.72668628636372 6.63380110493961 7.90078897659196 7.57746975589212 8.64208325932372 8.57229835930564 7.15011782232635 6.98383879336772 6.51276677637938 6.36098623329253 6.90349604885196 7.07410609920646 7.895394278977 7.398211398537 6.82899838274786 7.76884617706185 7.83415316876989 6.98331851115327 6.74801517513862 0.178606057964083 0.174681228892151 0.174980818121316 0.171828447572923 0.176710744854696 0.18239562891596 0.176872756626613 0.174331326860714 0.182443159101532 0.189804176220908 0.171336545117082 0.171336545117082 0.171336545117082 0.174032762176865 0.171336545117082 0.171336545117082 0.171336545117082 0.179802969126801 0.178382121763308 5 5 + 339014 339437 339254.091 338896 340250 + gene protein_coding_gene TRUE TRUE AT5G01880.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5A (ATL5A) [Arabidopsis Thaliana] (GB:Q9LZV8); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G10910.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96288.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.04738759962767 11.7510980445363 2.0942479504844e-07 1.63017431569613e-05 15.4994472197521 14.4615879963139 1.04738759962767 0.0660519576529281 AT5G08500_at 7.57166980198702 7.74798166359464 8.76208384775162 8.3632715030271 9.2504893792504 8.76990964133991 7.69971981024895 7.51578817701485 5.91841412172337 6.44110257956688 7.71982780055363 7.59948496259907 7.8105800044695 7.55530820295431 7.58638397643603 8.03188306515281 7.77605083259958 7.43085428442377 6.62954111423116 0.176120022892877 0.175833777714004 0.180501885366338 0.181074948600641 0.187380088982387 0.189027003273543 0.175833777714004 0.18192404479932 0.200768105334296 0.200811207233583 0.180425071348239 0.181216991409497 0.186274125340307 0.193905185096127 0.181048318192517 0.180658747954647 0.189137655561208 0.185285732894643 0.196593436049373 5 5|0 +|/ 2750653 2751303 2750980.5 2748194 2751772 + gene protein_coding_gene TRUE TRUE AT5G08500.1 transmembrane CLPTM1 family protein similar to transmembrane protein, putative [Arabidopsis thaliana] (TAIR:AT5G23575.1); similar to Os04g0441900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052878.1); similar to OSJNBa0064D20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04225.2); similar to P0076O17.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE02511.1); contains InterPro domain Cleft lip and palate transmembrane 1; (InterPro:IPR008429) 1.25587971613617 11.7390114509799 2.11566343807963e-07 1.64389291721257e-05 15.4906192053059 15.2193555178547 1.25587971613617 0.116722117298467 AT5G58600_at 5.28663461836025 5.61395486437057 4.85755567619296 5.16984749765277 6.0070351375392 6.00502585468454 3.91188984606663 3.83408235935772 3.749390303933 3.46119388933001 5.23156352652476 5.1010982005463 4.65415997304211 4.86317902003708 5.53707577569085 4.30038426396361 4.84447544870686 4.69152929106854 3.48806244186979 0.233871129445080 0.239749692625652 0.236918926359889 0.234268103230845 0.239779632336870 0.235971455074226 0.239844742525196 0.251306218533159 0.236281530191227 0.251999106146162 0.235603761594135 0.239704480436234 0.232057716400185 0.236724313024496 0.236576488484057 0.236029450839546 0.233009632979310 0.240165428580915 0.253338871216881 5 5|0 -|/ 23701174 23701884 23701462 23701017 23702951 - gene protein_coding_gene TRUE TRUE AT5G58600.1|AT5G58600.2 PMR5 (POWDERY MILDEW RESISTANT 5) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30010.1); similar to unknown [Pisum sativum] (GB:ABA29158.1); similar to Os01g0652100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043736.1); similar to Os03g0290900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049797.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 1.09247163094091 11.7255325065252 2.1398273263958e-07 1.65709273404147e-05 15.4807609932949 9.32032759802397 1.09247163094091 0.0794399639853835 AT5G44090_at 7.11924486547284 7.46052000822709 8.52532590258894 8.52447783370896 8.76329389197639 8.27616497159824 7.37740072283694 7.30954365460128 6.53995615792205 7.1127727433671 8.30734155422417 8.02879651493036 7.89968768716496 7.96297075044923 7.68462224035728 8.33169384585069 8.03957174571406 7.84403963114964 6.84538599497116 0.197475595732784 0.189441744942706 0.183038832684474 0.190462391928978 0.18989281217383 0.196515140968049 0.189921871013597 0.183988356311418 0.203599252625504 0.187806958940729 0.178849619785602 0.185389130509326 0.194220952115028 0.188074221690805 0.183081748656779 0.188063473772434 0.195786291208574 0.183848833362114 0.18344228032775 5 0|5 /|- 17760587 17761691 17761117.222 17759993 17765623 - gene protein_coding_gene TRUE TRUE AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G03960.1); similar to calcium-binding EF-hand family protein [Arabidopsis thaliana] (TAIR:AT1G54450.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to putative phosphatase subunit, 3'-partial [Oryza sativa] (GB:AAL31038.1); similar to putative protein phosphatase 2A 48 kDa regulatory subunit isoform 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD34016.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.19263693399677 11.7216859537448 2.14677804209647e-07 1.65709273404147e-05 15.4779451452117 15.3420192122014 1.19263693399677 0.103597264636236 AT5G19310_at 3.71414761486829 4.20594088895942 5.86989471646894 5.06020272103453 6.94966864520956 6.41981717029568 3.68958863471981 3.72395005052584 5.30693039946121 5.32266550099106 6.84857408262005 7.1044800894925 5.87048640251538 6.17243593570279 6.34276034149049 6.59656308640958 6.02328119985883 5.81923707979446 5.27842452591196 0.270513025215588 0.283177218069865 0.283765102769417 0.271718570105845 0.270513025215588 0.270513025215588 0.277150477301182 0.272363155532177 0.270513025215588 0.278031015704177 0.272870587131916 0.270513025215588 0.270513025215588 0.270513025215588 0.271463811447962 0.270513025215588 0.271261965831774 0.289343622631505 0.287382736528069 5 5 + 6502878 6503375 6503078.091 6498781 6503434 + gene protein_coding_gene TRUE TRUE AT5G19310.1 homeotic gene regulator, putative similar to homeotic gene regulator, putative [Arabidopsis thaliana] (TAIR:AT3G06010.1); similar to PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 10 [Canis familiaris] (GB:XP_859981.1); similar to PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 17 [Canis familiaris] (GB:XP_867807.1); similar to PREDICTED: similar to CG5942-PA, isoform A [Tribolium castaneum] (GB:XP_967398.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 1.64302140888230 11.7216830909837 2.14678322423998e-07 1.65709273404147e-05 15.4779430491191 10.7791016816054 1.64302140888230 0.187936491996376 AT5G42090_at 9.76072213290713 10.0413686854048 10.8409245755469 10.9730795166722 11.0378653907376 10.8668512690017 9.86078529070117 9.98419500111267 9.35281062369038 9.45967054164308 10.4829656115032 10.3487522856217 10.5251719777810 10.3480118243385 10.3121187758644 10.4855868126466 10.4515025770713 10.3605396323182 9.23827169977593 0.0963293989513342 0.0892547227396725 0.0959147395634342 0.0909291173564563 0.0921706579933838 0.092800311651533 0.0892547227396725 0.0892547227396725 0.108360422062824 0.0950195082686912 0.0909428822048768 0.0905494251878794 0.0910375006217324 0.098064739137117 0.0904386048169353 0.0892547227396725 0.0994656553927978 0.0931998644686122 0.0995061123257577 5 5 + 16844805 16845284 16845038.182 16843926 16845682 + gene protein_coding_gene TRUE TRUE AT5G42090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09570.1); similar to unknown [Sorghum bicolor] (GB:AAQ06259.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 1.04099632128241 11.7210446792874 2.14793921114237e-07 1.65709273404147e-05 15.4774755930218 20.3030150538503 1.04099632128241 0.0649135407961859 AT5G65960_at 8.92764997948634 9.10105267188472 9.62955108742916 9.61046663388096 9.92324929664416 9.69307355258794 8.05164746975151 8.32394675511056 8.1243932818914 7.86599474171013 9.22409604469015 9.2305320283297 9.08911710137492 9.1178755135271 9.17590103269555 9.16091663258075 8.47828412753303 8.96166693341769 8.19422249702018 0.135000751469701 0.13134330949613 0.134875608372483 0.135259719686135 0.132928482098630 0.145371491975391 0.139387988059323 0.138523673741483 0.140841040419675 0.156517757948261 0.132835428642833 0.131644474828650 0.133221643836714 0.140288539777392 0.135675891355925 0.13134330949613 0.164801985764536 0.133618778910329 0.141356917493755 5 5 + 26403679 26404315 26403995.091 26402574 26404673 + gene protein_coding_gene TRUE TRUE AT5G65960.1 similar to hypothetical protein DDBDRAFT_0189734 [Dictyostelium discoideum AX4] (GB:XP_647509.1); similar to Os04g0584800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053672.1); contains domain RAS-RELATED GTPASE (PTHR11708); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 1.05313638006933 11.7168371504749 2.15557484109499e-07 1.66002968246918e-05 15.4743939829697 17.7157474393348 1.05313638006933 0.0686921265248226 AT5G46410_at 5.22097057233251 5.62392476002734 7.42482141470283 7.34054357357087 8.3085867774041 6.86739968384633 4.80172610156187 4.44228187715013 3.90598619894427 3.86853809727308 5.40550425952153 5.47707265474243 5.73568008510388 6.07454999313454 4.80540004760215 6.68427076232918 6.04518922406862 5.45494258149176 3.94060083786715 0.247114931974384 0.245393096079853 0.250426131807417 0.245540709640902 0.259795622336661 0.254949341174944 0.24043640854645 0.245895146104616 0.270859973074294 0.257436022343754 0.245516326413746 0.239324009539890 0.239324009539890 0.252114867754310 0.260632384207040 0.239324009539890 0.266257413624054 0.239324009539890 0.260756722363803 5 5 + 18844178 18845339 18844706.9 18842330 18846448 + gene protein_coding_gene TRUE TRUE AT5G46410.1 NLI interacting factor (NIF) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18140.2); similar to CTD-phosphatase-like protein [Hordeum vulgare subsp. vulgare] (GB:AAQ92971.1); contains InterPro domain Dullard-like phosphatase domain; (InterPro:IPR011948); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 2.13419826212542 11.7144264319888 2.1599630050409e-07 1.66045974445815e-05 15.4726277494633 11.0614658012549 2.13419826212542 0.266734179481223 AT5G58230_at 7.14852495949636 7.24903073225566 8.61114601646353 8.08516041091108 8.33342447291587 8.43936237463497 7.13810353995137 7.0597435659717 6.611031539209 6.49184875285926 7.33108396704802 7.61786412819205 7.69774374945703 7.4315046290005 7.58755411099053 7.71257477325022 7.77898936904545 7.54691798630418 6.38320037921489 0.165603614832665 0.161021390771144 0.165406591512454 0.163168981835373 0.170552943738687 0.169172275805743 0.163475803625839 0.163474936613766 0.183905171031693 0.166933092614617 0.166949902541257 0.162675850910810 0.167510986244525 0.169192835217907 0.169452319823483 0.162163563555176 0.168946672460069 0.162698280902959 0.162588680895501 5 5 + 23574344 23575080 23574670.727 23573238 23575471 + gene protein_coding_gene TRUE TRUE AT5G58230.1 MSI1 (MULTICOPY SUPRESSOR OF IRA1) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. Identical to WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF IRA 1) (Protein medicis) (MSI1) [Arabidopsis Thaliana] (GB:O22467); similar to MSI2 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2) [Arabidopsis thaliana] (TAIR:AT2G16780.1); similar to WD-40 repeat protein [Pisum sativum] (GB:AAZ03745.1); similar to Glutathione S-transferase, C-terminal-like; WD40-like [Medicago truncatula] (GB:ABE90088.1); similar to WD-40 repeat protein MSI1 (GB:O22466); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Nitrous oxide reductase, N-terminal; (InterPro:IPR011045) 1.15554574235627 11.7097721722502 2.16846254383940e-07 1.66404328705436e-05 15.4692164999191 14.7997566655361 1.15554574235627 0.0954354331487912 AT5G64180_at 7.42313904462368 7.73554773603299 8.6553028837289 8.76745666355481 8.92866136358848 8.60700920092442 7.6778600020154 7.49492960319684 6.94021964304349 7.34636529060718 8.5485340476977 8.05877764664265 8.45997333269524 7.89720312154852 8.1133519409541 8.21159338472238 8.60779991224804 8.39543043719608 7.34829387243776 0.152797245413099 0.147925814210056 0.151353409859975 0.147426337676295 0.148543624567833 0.152401638575625 0.148294765274695 0.158489849998881 0.180552329796846 0.156171120195272 0.149180011136511 0.154295659513541 0.143556602461846 0.161620015372796 0.155409286352711 0.153922616694035 0.148316270445029 0.152074258565363 0.164532488229662 5 5|0 +|/ 25694391 25695370 25694866.5 25694306 25695583 + gene protein_coding_gene TRUE TRUE AT5G64180.1 similar to Os12g0502100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066826.1) 1.11584757037444 11.7020390706334 2.18266517871075e-07 1.67067321043694e-05 15.4635449813109 15.9103429355378 1.11584757037444 0.0860242367069722 AT5G16760_at 7.27870731185318 7.57991146704535 8.34928563960345 8.13340430332936 8.1893081957111 8.19416741778273 6.99112522801312 7.19571246028905 7.36953131563548 7.16476612573249 8.78567383958254 8.51017744665723 8.33318857582286 8.4320669490481 8.16074133151104 8.63717152193066 8.04858566333632 7.84468198601954 6.95813043331922 0.171599389291364 0.177155807601601 0.184196344896932 0.172466515388110 0.173557191126594 0.173764436976012 0.186312370132734 0.183389973886625 0.193280555667865 0.178444304523964 0.177310875746116 0.178365109061714 0.173813424241509 0.187096171558593 0.172330081462527 0.169192742718927 0.180516018058183 0.173470447339563 0.184098133125492 5 5 + 5510264 5510810 5510600 5509677 5511235 + gene protein_coding_gene TRUE TRUE AT5G16760.1 inositol 1,3,4-trisphosphate 5/6-kinase Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Identical to Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol- triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4- trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (AtItpk-1) (ITPK1) [Arabidopsis Thaliana] (GB:Q9SBA5;GB:O81633); similar to inositol 1,3,4-trisphosphate 5/6-kinase family protein [Arabidopsis thaliana] (TAIR:AT4G08170.2); similar to putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa] (GB:AAL67584.1); similar to Os10g0576100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065485.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Inositol 1, 3, 4-trisphosphate 56-kinase; (InterPro:IPR008656) 1.06753528082465 11.7008766907262 2.18480874360697e-07 1.67067321043694e-05 15.4626920838851 15.4930420225205 1.06753528082465 0.0732592212664717 AT5G49945_at 6.80387215320296 6.4392418187655 7.44426813432821 7.51685978138685 7.84179546489881 7.44355284330138 6.40840566137757 6.27141914036462 5.93944300221354 6.30572257942757 7.56762243217008 7.53568100409522 7.1474332677735 7.25791805809146 7.23830774568872 7.05002527934938 7.13794501690597 7.28011854398267 5.86060179110481 0.199140271593035 0.194062213020292 0.199556426944162 0.20435293174187 0.19269081792517 0.203859896984687 0.192233835576125 0.195287861844869 0.212225391855913 0.195443411059168 0.197588130411004 0.195110497268942 0.194807223053767 0.200178315913986 0.194100769108909 0.190634542659798 0.200341828486798 0.196574473281938 0.194442506667909 5 5 + 20335532 20336319 20335940 20334631 20337056 + gene protein_coding_gene TRUE TRUE AT5G49945.1 Identical to Hypothetical protein At5g49945 precursor [Arabidopsis Thaliana] (GB:Q94CC0;GB:Q9LTX6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24330.1); similar to ENSANGP00000011982 [Anopheles gambiae str. PEST] (GB:XP_319151.3); similar to Os05g0432400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055631.1); contains InterPro domain Protein of unknown function DUF1682; (InterPro:IPR012879) 1.16125499507148 11.6899969079219 2.20498374434969e-07 1.68313208454182e-05 15.4547039760987 13.6772454794145 1.16125499507148 0.09721719384299 AT5G39510_at 10.1279525623191 10.1758670184610 10.8422531217962 11.0218895825035 10.9905382350308 10.7344721079192 9.85885800157079 9.96757947836563 9.88367967166344 9.40429260739726 10.8105628729721 10.6054654197565 10.7105814314973 10.7114522094593 10.6610934516904 10.6946475638935 10.622267006968 10.7038281200134 9.2780926188768 0.09417245900447 0.0937061970994935 0.102059763226013 0.0931460121283023 0.0983574958073216 0.100008051433783 0.0959603723051134 0.0935679927608525 0.101011715755691 0.101377657881150 0.0931460121283023 0.0933542305467688 0.0961252793945988 0.0951749422840632 0.0959336664001082 0.0931460121283023 0.0978463843683556 0.095742091380826 0.102317052697263 5 5|0 +|/ 15839331 15840764 15840241.3 15838671 15841068 + gene protein_coding_gene TRUE TRUE AT5G39510.1 VTI11 (VESICLE TRANSPORT V-SNARE 11, vesicle transport v-SNARE 11); receptor Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Identical to Vesicle transport v-SNARE 11 (AtVTI11) (Vesicle transport v-SNARE protein VTI1a) (Vesicle soluble NSF attachment protein receptor VTI1a) (AtVTI1a) (VTI11) [Arabidopsis Thaliana] (GB:Q9SEL6;GB:Q9FLY4); similar to VTI13 (vesicle transport v-SNARE 13), SNARE binding / receptor [Arabidopsis thaliana] (TAIR:AT3G29100.1); similar to Vesicle transport v-SNARE [Medicago truncatula] (GB:ABE86759.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) 1.01634481175938 11.6871374181230 2.21031983081536e-07 1.68424007248843e-05 15.4526029765127 20.5709307095843 1.01634481175938 0.0579036028148341 AT5G49360_at 11.0802038065427 11.2191110170338 12.8523273571571 12.8583894166319 13.0661723886293 13.0753370707211 11.5603938647368 11.5010054074791 11.7442777114987 11.5869591175055 12.1064596132448 10.6906606554929 12.4011415176955 12.3312931995382 10.9410359226564 12.0967915929477 12.5590241665481 12.0131126030144 11.5438963514969 0.0728555194576824 0.0728555194576824 0.0766947238379173 0.0754662418729857 0.0753106333827472 0.0763933402996922 0.0756981186045137 0.0750828865039138 0.0809220009152925 0.074459585987885 0.073766469239789 0.0741497661128395 0.0746857407280265 0.0755629925770113 0.0742593033722557 0.0737997997245043 0.0769178438405962 0.0731141584447911 0.0753589239330164 5 5 - 20029408 20029918 20029682.909 20029105 20033968 - gene protein_coding_gene TRUE TRUE AT5G49360.1 BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds encodes a beta-xylosidase located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL2 (BETA-XYLOSIDASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G02640.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to alpha-L-arabinofuranosidase / beta-D-xylosidase [Pyrus pyrifolia] (GB:BAD98523.1); similar to beta xylosidase [Fragaria x ananassa] (GB:AAS17751.2); similar to auxin-induced beta-glucosidase [Chenopodium rubrum] (GB:AAP83934.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.945136774864307 11.6739161623171 2.23517528753141e-07 1.69888823587303e-05 15.4428804876539 23.9103596923128 0.945136774864307 0.0262124648488044 AT5G56180_at 7.5082803663101 7.5477372406619 8.78955702114472 8.59324107364958 8.98604781380724 8.45542317530562 7.23308586926067 6.99162601908545 6.1505847129599 6.30422237079848 7.36864895091419 7.03177661299748 7.5826898878595 7.33820017734247 7.09732641720137 7.28635367896404 7.54795738423346 7.15662751341217 6.39794133523018 0.157491215685728 0.155935327270792 0.159260160785499 0.156042029769372 0.165866112304393 0.160869725519260 0.162339138030043 0.159936840338302 0.166860915876772 0.171573802904708 0.157925835444562 0.160720107140825 0.158500660014139 0.160702147460764 0.160458794020731 0.155738025501320 0.162496415148289 0.163458634016088 0.164099686136428 5 5|0 -|/ 22754774 22758121 22756663.889 22754551 22758257 - gene protein_coding_gene TRUE TRUE AT5G56180.1|AT5G56180.2 ATARP8 (ACTIN-RELATED PROTEIN 8); structural constituent of cytoskeleton encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to OSJNBa0043A12.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE02800.1); similar to B0811B10.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86197.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Actin/actin-like; (InterPro:IPR004000)|similar to ACT9 (ACTIN 9), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G42090.1); similar to OSJNBa0043A12.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE02800.1); similar to B0811B10.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86197.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 1.20141650100833 11.6709722015447 2.24075111167384e-07 1.69888823587303e-05 15.4407137515678 14.8058483478340 1.20141650100833 0.106672748048532 AT5G22950_at 8.46680861256167 8.55625915873918 9.58610330112777 9.74119204474738 9.80964348908914 9.56817172834815 8.84195148788142 8.5601760854403 8.13252757026926 7.82779415591386 9.09542774544948 8.89489694908461 8.85647640398459 8.95766170879144 8.89336207114113 9.07981152321488 9.26254966159266 8.88173113086693 7.8733207801806 0.141950951154971 0.130681523613253 0.137850171663569 0.137181381470016 0.139188107560949 0.136517056449371 0.134758946783949 0.134260600110315 0.142674990409641 0.145653837339705 0.133229094315901 0.133040345953357 0.136964570456295 0.137216982606657 0.131408596305776 0.130681523613253 0.135089148628709 0.135872362969487 0.140068760553388 5 0|5 /|+ 7682098 7682695 7682385.875 7681308 7682906 + gene protein_coding_gene TRUE TRUE AT5G22950.1 SNF7 family protein similar to SNF7 family protein [Arabidopsis thaliana] (TAIR:AT3G45000.1); similar to putative endosomal Vps protein complex subunit [Oryza sativa (japonica cultivar-group)] (GB:BAC45115.1); contains InterPro domain Snf7; (InterPro:IPR005024) 1.05783547590847 11.6697866193082 2.24300086158986e-07 1.69888823587303e-05 15.4398409811244 17.6086818141854 1.05783547590847 0.0713018622205507 AT5G60820_at 6.50791629532847 7.08252662740585 7.6543700970155 7.54621975979989 7.844610321344 7.91588575990477 6.025507054687 6.36242295093808 6.37513135770358 5.68085347912584 7.53276392609162 7.55220459254928 6.7561029390543 7.34793402386589 7.05135374716179 7.10858253350905 7.05783179470308 7.83367961438463 6.0108765649671 0.210657247891272 0.201788923731023 0.213864458556895 0.206080788383042 0.215409301925432 0.207634659119848 0.206860981138485 0.216275094055354 0.210650564320794 0.203230726978808 0.201815963622525 0.20394027090792 0.212236891449230 0.216951039549865 0.201788923731023 0.207193761298553 0.204854894606847 0.205086666547546 0.210342224407829 5 5 + 24487628 24488096 24487878.364 24486813 24488121 + gene protein_coding_gene TRUE TRUE AT5G60820.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G08139.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.25172388245449 11.6682318380514 2.24595492512481e-07 1.69888823587303e-05 15.4386962585243 13.7686042484765 1.25172388245449 0.117430824520605 AT5G19440_at 9.47672833452547 9.24197363360551 10.0375329862520 9.99439568541042 9.6416892273553 9.55429479324649 8.78900547968618 8.63821457433837 6.92277214358056 8.00516831226622 8.71966344382629 8.67844726061 8.50988649906633 8.57111011469817 8.72607201532694 8.20115408436242 8.91056967645212 9.04861874785905 7.42147547140346 0.135541008762797 0.137394761648994 0.145885057479946 0.142870586311843 0.135215316771985 0.138865390761468 0.137614776086267 0.134031320881464 0.158015679498703 0.143293091327038 0.140258836269962 0.132338388475082 0.136944250592058 0.136856342464050 0.132338388475082 0.139286289500147 0.132338388475082 0.138447412423094 0.151246741965839 5 5|0 +|/ 6557220 6558001 6557656.8 6556422 6558344 + gene protein_coding_gene TRUE TRUE AT5G19440.1 cinnamyl-alcohol dehydrogenase, putative (CAD) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase similar to cinnamyl-alcohol dehydrogenase, putative (CAD) [Arabidopsis thaliana] (TAIR:AT1G51410.1); similar to putative cinnamyl alcohol dehydrogenase [Malus x domestica] (GB:AAC06319.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.995691294359466 11.6665604915332 2.24913518202437e-07 1.69888823587303e-05 15.437465504747 17.4819771089818 0.995691294359466 0.0511452747754387 AT5G25070_at 5.95129669610581 6.28815437286242 6.8384129505186 6.90003752704216 7.49010620436213 6.97247544253665 5.41684768667572 5.39215680586104 5.11553012442632 5.6380620685927 6.59916229585779 6.54728716847868 6.60783743446187 6.31134982651912 6.34826720194409 6.84525705686276 6.64629380549286 6.59368334467448 5.57768246420585 0.188189201363336 0.183640035202849 0.184116125222317 0.191916671722942 0.189486664660801 0.194438903279901 0.182362495445118 0.190819304895925 0.191907412637935 0.177905304898642 0.182491504536152 0.180031630438745 0.178993118630545 0.177905304898642 0.187071529245340 0.179638875940142 0.179575388577252 0.179747856393204 0.188051543417078 5 5 - 8641264 8641839 8641497.545 8641001 8643494 - gene protein_coding_gene TRUE TRUE AT5G25070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16730.1); similar to Os08g0516000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062237.1); similar to hypothetical protein, conserved [Leishmania major] (GB:CAJ07774.1) 1.20338909422507 11.6537122096180 2.27374724583258e-07 1.70510896398151e-05 15.427996996156 12.4092612036763 1.20338909422507 0.10749215296042 AT5G03040_at 8.4022341409774 8.57508367671824 9.36908569756975 9.40837919886888 9.92299661401642 9.89669735382184 9.48645134385327 9.43992524990766 9.52438963101246 8.95090995181959 10.9759208129947 10.2767373855763 10.6954884637914 10.6022544854963 10.4337125640505 10.1109353031943 9.9253535006868 10.4056350044158 9.11414524211577 0.103408752385553 0.106394897848126 0.100065462341097 0.100257765121917 0.098233190786007 0.099729964768626 0.101788046660766 0.104866156150007 0.107772920688566 0.104027339664892 0.098233190786007 0.101126957486022 0.101159451641857 0.0988177062999828 0.100404224245533 0.0995271606136421 0.111115136728357 0.102070613120656 0.10094658367444 5 5 - 710919 711996 711490.364 710100 712787 - gene protein_coding_gene TRUE TRUE AT5G03040.1 IQD2 (IQ-domain 2); calmodulin binding similar to IQD1 (IQ-DOMAIN 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G09710.1); similar to IQ calmodulin-binding re (GB:ABE78306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.952569597457438 11.6522184351563 2.27662766625344e-07 1.70510896398151e-05 15.4268953317584 19.1249748086375 0.952569597457438 0.0320395508423133 AT5G19420_at 4.60730532555522 4.76415593097751 5.4055653332819 5.60365844642966 5.79822344058144 5.86252197562958 4.01524420547856 4.40596970119988 4.42925334138861 4.30277478163267 5.19725717682105 5.04536501148516 5.69939967657814 5.78673180504482 4.74350907555659 4.97551708098765 5.42148554411595 5.31754115666697 4.19369734083338 0.194866174238482 0.193659098490735 0.196787659713823 0.194073815848547 0.196210568423637 0.205896413489904 0.194919490385609 0.19820585192394 0.193681107394740 0.188901435214119 0.19050196402744 0.190459579632408 0.194602401589610 0.189794472665195 0.196271876909012 0.189516023440196 0.195266565379541 0.207917793511144 0.190350750940516 5 5|0 -|/ 6548193 6548530 6548367 6547640 6552850 - gene protein_coding_gene TRUE TRUE AT5G19420.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G42140.1); similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to Pleckstrin-like; Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89832.1); similar to unknown prtein [Oryza sativa (japonica cultivar-group)] (GB:AAT77332.1); similar to putative ZR1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87854.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 1.09204958473334 11.6459011965247 2.28885305780595e-07 1.70510896398151e-05 15.4222344280533 9.84879353015435 1.09204958473334 0.0812884948538188 AT5G56280_at 7.88796913944992 7.57225991326257 8.81945859228632 8.69335957416983 9.00093491513372 8.59758333529815 8.40389572023309 8.08899198470854 6.66913063779532 6.88624179045265 8.3856393249172 8.34387138779753 8.31829223062945 8.26487432220054 8.46782249306017 8.20036210614403 8.14978890892867 8.40723703837148 6.58270229556503 0.164245128618821 0.157870918993897 0.161659282723399 0.161144762247271 0.161256328318655 0.176858179080432 0.160615485526171 0.171881567150268 0.205939853107836 0.174820080660427 0.157870918993897 0.160900387301683 0.162569308610632 0.161568219552469 0.160133358210930 0.171876693403187 0.171272317765756 0.165739592681345 0.192662356233220 5 5|0 -|/ 22800884 22802158 22801696.2 22800610 22802803 - gene protein_coding_gene TRUE TRUE AT5G56280.1 CSN6A (COP9 signalosome subunit 6A) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation. Identical to COP9 signalosome complex subunit 6a (Signalosome subunit 6a) (AtCSN6a) (CSN6A) [Arabidopsis Thaliana] (GB:Q8W206;GB:Q84WB5;GB:Q941I1;GB:Q9FG76); similar to CSN6B (COP9 signalosome subunit 6B) [Arabidopsis thaliana] (TAIR:AT4G26430.1); similar to COP9 signalosome subunit 6 [Chlamydomonas reinhardtii] (GB:ABC49916.1); similar to Os08g0500000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062152.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639) 1.19704965835514 11.6443120007583 2.29193976798808e-07 1.70510896398151e-05 15.4210614200070 15.898020422373 1.19704965835514 0.106316726362919 AT5G51200_at 6.46835109561478 6.61689861211916 7.06594900511398 7.23231546363408 7.8623428591569 7.41506709212784 6.47670291090873 6.1373752404418 5.79852063603134 5.49782638085019 7.37286150070544 7.5527616446801 7.42192103611177 7.35439567712856 7.14765520860117 7.44525997003851 6.60219093139662 6.56331809725166 6.02613840041723 0.215610128101655 0.218133622936601 0.216170924204795 0.214873340032053 0.212727937383606 0.233612499574163 0.213949045266802 0.229512290391361 0.227946944720191 0.234723594097789 0.217304870901078 0.212727937383606 0.218444912712148 0.212727937383606 0.216943808696082 0.212727937383606 0.221485467215011 0.232756758040859 0.225598919503074 5 5 + 20835699 20836577 20836066.8 20822152 20836818 + gene protein_coding_gene TRUE TRUE AT5G51200.1 similar to hypothetical protein MtrDRAFT_AC135797g1v1 [Medicago truncatula] (GB:ABE82088.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93939.1); contains domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (SSF56425) 1.18873517135503 11.6415616107934 2.29729258239292e-07 1.70510896398151e-05 15.4190308541250 13.3877289418924 1.18873517135503 0.104543215163548 AT5G60890_at 4.34029781710053 4.31232293240225 6.14681266428272 6.06504697217658 6.54830773596425 6.55370417591437 7.91736944487205 7.77962847108974 5.84852764148489 6.90453089570018 8.23107585539642 8.40095345116497 8.65975827972034 8.01305696367894 8.1741413610804 8.29595458678232 7.97975128711667 8.41543094658496 7.11177870300673 0.230092952306840 0.242735478429029 0.222210673760482 0.222890925014588 0.225001190731305 0.237951352715681 0.219848695349555 0.216747918253020 0.226987057475324 0.224683570632566 0.220139047255486 0.221176871319890 0.216747918253020 0.224606678386427 0.219318415622709 0.217535593218686 0.224542103776313 0.222539571342938 0.217995808416113 5 5 + 24512916 24513360 24513139.091 24511917 24513577 + gene protein_coding_gene TRUE TRUE AT5G60890.1 ATR1 (ALTERED TRYPTOPHAN REGULATION); DNA binding / kinase/ transcription factor Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. similar to MYB51 (myb domain protein 51), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G18570.1); similar to Os04g0461000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052993.1); similar to Os08g0433400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061874.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.945358074380848 11.6412447823964 2.29791006743548e-07 1.70510896398151e-05 15.4187969073633 13.6543751541443 0.945358074380848 0.0281552651984772 AT5G61510_at 8.0690236013244 8.28631085731 9.01366959868535 9.29123560871885 8.74285731714505 8.84999242677686 7.81498253672816 7.94668268641807 7.30923775410812 7.32192757928088 8.58125966375112 8.35691954137172 7.89463426455246 8.2875784848076 8.62443572160523 8.38211493228108 8.40593610089319 8.52307269824155 7.09241081629435 0.172296320911024 0.172367988656023 0.181147255015707 0.174902329055577 0.168328501726511 0.188503378094692 0.175581990757978 0.174193164553816 0.211710900301319 0.180778048093402 0.176544519193124 0.171712526421938 0.185788935398414 0.180434788461776 0.175161664916013 0.169081989863563 0.181544587410529 0.181705007243511 0.179854638485092 5 0|5 /|- 24754328 24754915 24754553.7 24754171 24756224 - gene protein_coding_gene TRUE TRUE AT5G61510.1 NADP-dependent oxidoreductase, putative similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G21580.1); similar to Ted2 [Vigna unguiculata] (GB:CAA69914.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 1.04299534671495 11.6406181052346 2.29913196633004e-07 1.70510896398151e-05 15.4183341446285 16.3134373170546 1.04299534671495 0.0677082874524989 AT5G55170_at 6.66952637379709 6.40254732166025 7.38770339936119 7.12996907230294 5.84781180551681 6.25163603126733 3.26957983189861 3.57573524391829 4.27722706196233 3.08927276713186 3.78952824566564 4.54036204968474 4.11136192318843 4.59986322266055 4.12528236185379 4.29166730964902 4.64929595803705 5.23481299223485 3.66772915375908 0.284910070667978 0.280945826813214 0.289209872019549 0.2816775314076 0.278421649845042 0.282673786392992 0.273084402934182 0.281996524677908 0.275031179747404 0.282872686847196 0.277504724654927 0.275165198629377 0.274696523006895 0.275839425260639 0.273084402934182 0.273084402934182 0.276381046176796 0.273084402934182 0.278131351925652 5 5 - 22402712 22403269 22402952.818 22402536 22403340 - gene protein_coding_gene TRUE TRUE AT5G55170.1 SUM3 (SMALL UBIQUITIN-LIKE MODIFIER 3) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. similar to SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) [Arabidopsis thaliana] (TAIR:AT5G55160.1); similar to Os01g0918300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045207.1); similar to ubiquitin-like protein SMT3 [Phaseolus vulgaris] (GB:AAM21576.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.20731415727375 11.6381679358692 2.30391610961712e-07 1.70510896398151e-05 15.4165245513621 9.86473767771007 1.20731415727375 0.108695679695245 AT5G47120_at 10.8082057652470 11.1281823494831 11.9699021802441 12.1265142364210 11.7238829542334 11.3892330813940 10.4525232733846 10.4702669078188 9.38515797792095 9.19949664150082 10.1837739163932 10.3001727295258 10.5484392080979 10.3761854692081 9.90691164688764 10.4849550660982 10.5028156343616 10.3503923922060 9.04823720420612 0.113334872614780 0.114389788751915 0.118768175720320 0.115810629892387 0.115653660329107 0.118845486784827 0.114967403016313 0.114809155219616 0.125298524341654 0.120771818670142 0.116750362250832 0.113217275012173 0.113217275012173 0.117311528090894 0.119033902169136 0.113217275012173 0.122791956387642 0.118008894014287 0.124479696579667 5 5 + 19153915 19154647 19154306.727 19153250 19155169 + gene protein_coding_gene TRUE TRUE AT5G47120.1 ATBI-1 (ARABIDOPSIS BAX INHIBITOR 1) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. Identical to Bax inhibitor 1 (BI-1) (AtBI-1) (BI-1) [Arabidopsis Thaliana] (GB:Q9LD45); similar to Bax inhibitor-1 family protein / BI-1 family protein [Arabidopsis thaliana] (TAIR:AT4G17580.1); similar to Bax inhibitor 1 [Brassica napus] (GB:AAK73101.1); contains InterPro domain Bax inhibitor 1; (InterPro:IPR006213); contains InterPro domain Protein of unknown function UPF0005; (InterPro:IPR006214) 1.10416517786389 11.6367795241076 2.30663189600941e-07 1.70510896398151e-05 15.4154989208709 21.0299236930565 1.10416517786389 0.0846408440419016 AT5G05700_at 7.17671131742464 7.50178206116573 8.32945586878046 8.4014623826284 8.87411782948214 8.64281814598244 7.01631524422077 7.33849130590414 7.85176651478494 7.0249481794733 8.48893186347708 8.12527773231924 8.34479127190438 8.45957233646234 8.11968500571322 8.54229639641085 8.16221617461055 8.31885428282074 7.25199264295764 0.199193928339282 0.186725372997435 0.197663191780119 0.194810904278223 0.197245400330158 0.190570672865147 0.193784885676650 0.194873477779706 0.206951780051032 0.194242176441971 0.192526861400877 0.191627464992686 0.194865008818356 0.192430986252443 0.192655403205321 0.186725372997435 0.202950313625077 0.187202563929248 0.196653713322657 5 5|0 -|/ 1712985 1713820 1713308 1712671 1715732 - gene protein_coding_gene TRUE TRUE AT5G05700.1 ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase Encodes an arginyl-tRNA:protein transferase. Mutants display delayed leaf senescence. Identical to Arginyl-tRNA--protein transferase 1 (EC 2.3.2.8) (R-transferase 1) (Arginyltransferase 1) (Arginine-tRNA--protein transferase 1) (ATE1) [Arabidopsis Thaliana] (GB:Q9ZT48); similar to arginine-tRNA-protein transferase, putative / arginyltransferase, putative / arginyl-tRNA-protein transferase, putative [Arabidopsis thaliana] (TAIR:AT3G11240.1); similar to Os05g0446800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055690.1); similar to MGC81517 protein [Xenopus laevis] (GB:AAH72233.1); contains InterPro domain Arginine-tRNA-protein transferase, N-terminal; (InterPro:IPR007471); contains InterPro domain Arginine-tRNA-protein transferase, C-terminal; (InterPro:IPR007472) 1.12380296421619 11.6339784323705 2.31212154439293e-07 1.70510896398151e-05 15.4134292762592 15.7583637254670 1.12380296421619 0.0896137280073269 AT5G46620_at 6.78719087794525 6.96405185054564 7.83311150749406 7.9592015146098 8.60415022691312 8.07559517738704 7.07999861007224 6.98093486561174 6.43031071183468 6.65399282340547 7.78415224964597 7.8099055713846 8.06556661568838 7.9807275584213 7.28446315318145 7.98155272118868 7.66306852819827 7.7146437377884 6.75131705109067 0.197278598675389 0.188713927099216 0.198594911224278 0.200381381766408 0.194776218680917 0.197123399749613 0.200446624746947 0.192590561550181 0.217974113070322 0.194769757671989 0.196612223728159 0.188713927099216 0.188713927099216 0.190586354760054 0.196683317237806 0.188713927099216 0.207535062888927 0.191006999989562 0.196575507757717 5 5|0 -|/ 18935079 18936307 18935833.778 18934840 18936647 - gene protein_coding_gene TRUE TRUE AT5G46620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17960.1); similar to Os02g0128100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045767.1) 1.16930352185874 11.6331935554548 2.31366231339019e-07 1.70510896398151e-05 15.4128492441908 14.7342211016794 1.16930352185874 0.100366119272337 AT5G02190_at 2.68757861839848 2.70168712843024 2.12776590271108 1.78606965071140 3.19149989187585 2.72980711241818 2.22548714507146 2.16552554144275 1.67075517830943 1.65782928064798 3.49934054345955 4.15305825386099 4.58277758523224 3.83648481597066 4.56901881832885 4.06662593982338 3.22495484769751 3.99560471459656 1.68145636755267 0.250465646589806 0.247867567227405 0.263377401248310 0.257444832529791 0.247867567227405 0.253320761328311 0.250094714799183 0.250143037523614 0.269476477764562 0.256107526413778 0.248937553306472 0.254710701181463 0.254063951301075 0.25441336650268 0.252366479693967 0.247867567227405 0.259477023650092 0.250329051297423 0.252264854667216 5 5 + 436083 436481 436273.364 435209 436895 + gene protein_coding_gene TRUE TRUE AT5G02190.1 PCS1 (PROMOTION OF CELL SURVIVAL1); aspartic-type endopeptidase/ peptidase encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT2G39710.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Peptidase aspartic, catalytic [Medicago truncatula] (GB:ABE83471.1); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.16734280606396 11.6309793511877 2.31801497640817e-07 1.70510896398151e-05 15.4112126661434 5.28242602323639 1.16734280606396 0.099969740796757 AT5G04110_at 4.27583501860612 4.49985980040924 5.61526895419556 5.8443816575075 5.9886294200956 5.85640153008928 5.58555691584518 5.54484563782676 4.50352442159671 4.36580163283794 5.50829742026771 5.400128087701 5.91628882606261 5.66377818111947 5.22825917391162 5.93838519824202 5.7563659253966 5.51597830561343 4.41407177276231 0.159549286284801 0.152887213357696 0.154110646561014 0.152445489976314 0.159171321477397 0.161065922105309 0.153396147656328 0.161593328233058 0.165136522100525 0.160248066770410 0.152098343680709 0.154191284900403 0.152676099493739 0.161002978865439 0.156541487477363 0.153770817544367 0.161901321444249 0.153199364565904 0.158406565967751 5 5 - 1110797 1113596 1111980.955 1110447 1114868 - gene protein_coding_gene TRUE TRUE AT5G04110.1 DNA topoisomerase II family protein similar to DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative [Arabidopsis thaliana] (TAIR:AT3G10270.1); similar to DNA gyrase subunit B, chloroplast/mitochondrial precursor (GB:Q5YLB4); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain DNA topoisomerase, type IIA, subunit B; (InterPro:IPR000565); contains InterPro domain DNA topoisomerase, type IIA, subunit B or N-terminal; (InterPro:IPR001241); contains InterPro domain DNA topoisomerase, type IIA, subunit B, region 2; (InterPro:IPR013506); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.01889095567857 11.6308362990652 2.31829649317301e-07 1.70510896398151e-05 15.4111069193385 10.4232145745827 1.01889095567857 0.0604011244903426 AT5G19280_at 5.95879493157334 5.92313138811157 7.10509411915972 7.03011056778924 6.86767076785989 7.01128880750887 6.01511429451782 5.84167882146647 5.77871408124149 5.62006707972697 6.78433982662906 6.68769239594145 6.3008080433468 7.01751779623514 6.48018352390545 6.84502995339069 6.82992341329545 6.53152509509662 6.04543379849765 0.189439169905327 0.185001501189309 0.189228796759285 0.190439785016831 0.187325814673085 0.206418620113441 0.197187710187335 0.189380462322865 0.192557021707776 0.187445687690663 0.186290009228603 0.187278163091753 0.197002465964414 0.195753198650637 0.191474952481432 0.187704394858131 0.204251354820537 0.200109177816886 0.203268181301411 5 5|0 +|/ 6491743 6493159 6492405.25 6488321 6493441 + gene protein_coding_gene TRUE TRUE AT5G19280.1 KAPP (Kinase-associated protein phosphatase); protein phosphatase type 2C kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region Identical to Kinase-associated protein phosphatase (EC 3.1.3.16) (KAPP) [Arabidopsis Thaliana] (GB:P46014); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G31750.1); similar to kinase-associated protein phosophatase [Brassica oleracea] (GB:CAD20349.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.969375196410087 11.6302561904367 2.31943848843910e-07 1.70510896398151e-05 15.4106780758576 12.7187933751494 0.969375196410087 0.0415332728763604 AT5G10740_at 5.71653713626784 5.41757121763844 7.16770106694623 7.02477785309118 6.51174640021353 6.25078485412606 3.37242198051914 3.53823455954749 4.1089000669886 3.20902117564962 2.91720926888129 3.08425361921349 3.67790715171821 3.78110954406653 2.57410033893558 4.3064324049157 4.44127767038436 3.21288090335661 3.38422172745311 0.243082870988763 0.246549303006862 0.250732119338804 0.254259226719331 0.246426183710556 0.260370415726983 0.241270723749141 0.242657031367261 0.242664304184175 0.243360472869891 0.246711637254083 0.244286671700535 0.249734673981616 0.241270723749141 0.249786788272265 0.243046562292265 0.255087484502322 0.254938748172339 0.241624486827136 5 5 - 3393822 3394656 3394077.273 3393570 3396201 - gene protein_coding_gene TRUE TRUE AT5G10740.1 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT5G24940.1); similar to protein phosphatase 2C [Mesembryanthemum crystallinum] (GB:BAB88944.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.07978834637728 11.6298218404286 2.32029394556214e-07 1.70510896398151e-05 15.4103569668245 9.15836055990095 1.07978834637728 0.0784306962985664 AT5G43500_at 3.83781732477391 3.79547349716850 5.24352226980111 4.759959123707 6.53189145173024 5.50137659576373 3.93005365893639 3.60994215893056 3.11886473961555 2.67483374750636 4.44511993138291 4.60162344522514 4.71033780353243 4.68798268646382 5.27992290160721 5.02047217254117 4.91761758329626 4.91707108775993 3.44034759259088 0.239015644745566 0.246329397762563 0.244140342729175 0.255799806857946 0.246073391134341 0.258483294423004 0.246642088887081 0.239019534002134 0.262631213397002 0.239661914701983 0.242120424597445 0.238968768067272 0.243605088825329 0.239780408062015 0.250673288413738 0.243358741546834 0.255697692369365 0.245791513300725 0.245328493667636 5 0|5 /|+ 17489622 17490372 17490007.667 17486903 17490819 + gene protein_coding_gene TRUE TRUE AT5G43500.1|AT5G43500.2 ATARP9 (ACTIN-RELATED PROTEIN 9); protein binding encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. similar to novel protein similar to actin-related protein 8 [Xenopus tropicalis] (GB:CAJ83392.1); similar to Os04g0177600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052170.1); similar to OSJNBa0096F01.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04100.3); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 1.73018439593501 11.6264310245504 2.32698400485232e-07 1.70537787449720e-05 15.4078496778666 8.60152141579162 1.73018439593501 0.204765321740551 AT5G07100_at 8.92236882978776 8.7965684138408 9.86008480134342 9.84406440508685 10.7096554085407 10.4219834236506 6.55480139236794 5.70621823222204 5.77646369708398 5.82473977676415 5.44764563835993 3.82122644757945 5.96803659966977 6.56104856197169 3.51179662039011 5.92142336607706 8.14866801516948 5.68605549098671 4.73831315968485 0.248443997073175 0.247251127536066 0.24997517059204 0.252010442149586 0.256029768096625 0.25202035657637 0.254127495631699 0.24474119383409 0.253135073854525 0.252078181092861 0.252303439279266 0.268639690337782 0.244881137712436 0.24474119383409 0.258171232308559 0.24474119383409 0.249576534916996 0.248699447765417 0.265724156441241 5 5 + 2204873 2205592 2205113.364 2204249 2205812 + gene protein_coding_gene TRUE TRUE AT5G07100.1|AT5G07100.2 WRKY26 (WRKY DNA-binding protein 26); transcription factor Encodes WRKY DNA-binding protein 26 (WRKY26). Identical to Probable WRKY transcription factor 26 (WRKY DNA-binding protein 26) (SPF1-like protein) (WRKY26) [Arabidopsis Thaliana] (GB:Q9C5T3;GB:Q8GYK8;GB:Q9LYQ5); similar to WRKY33 (WRKY DNA-binding protein 33), transcription factor [Arabidopsis thaliana] (TAIR:AT2G38470.1); similar to SPF1 protein [Ipomoea batatas] (GB:BAA06278.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)|Identical to Probable WRKY transcription factor 26 (WRKY DNA-binding protein 26) (SPF1-like protein) (WRKY26) [Arabidopsis Thaliana] (GB:Q9C5T3;GB:Q8GYK8;GB:Q9LYQ5); similar to WRKY33 (WRKY DNA-binding protein 33), transcription factor [Arabidopsis thaliana] (TAIR:AT2G38470.1); similar to WRKY3 [Nicotiana attenuata] (GB:AAS13439.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.45034492030764 11.6245163102324 2.33077099210708e-07 1.70537787449720e-05 15.4064334748464 14.3918396818733 1.45034492030764 0.156605478180412 AT5G57460_at 7.44710168467565 7.67231487830413 7.71178138005839 8.1028627382051 7.99410114564829 8.36202091176466 6.69753313989617 6.98503800581747 7.02667016128207 6.99007380876871 8.92476269220248 8.87291595992524 8.3638218414872 8.26963931187322 8.92814688323405 8.2390713380114 8.17105401429555 8.69252269381674 6.84549977845234 0.186082805470564 0.18354232410103 0.190855270713252 0.188257047879975 0.190046214004051 0.184762223008374 0.189014302409885 0.187933608721181 0.197297195967214 0.186872647067299 0.18354232410103 0.186153779044555 0.183603002013065 0.193167681223047 0.187767085318931 0.189090942149591 0.185006027289518 0.190163758499106 0.186722524683708 5 5 + 23293953 23294394 23294118.455 23292395 23294710 + gene protein_coding_gene TRUE TRUE AT5G57460.1 similar to Os08g0243900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061348.1); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) 1.22292760455023 11.6236635127363 2.33245984157239e-07 1.70537787449720e-05 15.4058026181003 15.3775057812246 1.22292760455023 0.112377601880224 AT5G63010_at 2.22390472871433 2.53520280779415 3.66851111601703 3.85245872828698 4.35029423330121 3.9571380307191 2.22698475230705 2.20505583817978 1.87085491094885 2.01133746572579 2.57543030337984 3.02399883079437 2.94068928345572 2.56074456401897 2.62444996744644 2.68479830039326 2.68919434156147 2.62888531950989 2.44574456064512 0.196683733458372 0.201675906568182 0.192845962390639 0.203889113161700 0.201176359204587 0.215049742992640 0.205256765559843 0.194076471028160 0.195716343796164 0.201068259063298 0.192845962390639 0.195753833714813 0.197577341734783 0.192845962390639 0.200211710027664 0.198165879521903 0.201842641936448 0.198470508888310 0.195060259016416 5 5 + 25299648 25300157 25299926.455 25298940 25300402 + gene protein_coding_gene TRUE TRUE AT5G63010.1 WD-40 repeat family protein similar to COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) [Arabidopsis thaliana] (TAIR:AT2G32950.1); similar to Os04g0507900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053266.1); similar to PREDICTED: similar to CG3184-PA [Danio rerio] (GB:XP_692484.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.13301252335616 11.6057547531930 2.36823497666742e-07 1.72861982053916e-05 15.3925415156140 5.54011186754491 1.13301252335616 0.0925148185276347 AT5G52810_at 7.6041866912378 8.12475404972242 9.7542340252948 10.0610114721931 7.19517723510638 7.40036467754657 6.59874210821237 6.69100035289553 6.93363501708099 6.940751460201 7.33395386225733 7.45396022055805 7.05013203811884 7.78211725824985 6.17710967663422 7.60689499950916 7.73371883703954 8.38237526559466 5.18745722593872 0.208251156446032 0.211290747157699 0.218200732637133 0.223880598623251 0.217298474679653 0.218463819601062 0.216649883135718 0.207486328727813 0.233144483200189 0.213160659390667 0.211347893490690 0.209781346364794 0.212599162196744 0.209453222798987 0.221273637936927 0.210741905635416 0.216743301506216 0.208042753640601 0.226044769878001 5 5 + 21417147 21417691 21417379.545 21416557 21417829 + gene protein_coding_gene TRUE TRUE AT5G52810.1 ornithine cyclodeaminase/mu-crystallin family protein similar to Aconitate hydratase, N-terminal; Ornithine cyclodeaminase/mu-crystallin [Medicago truncatula] (GB:ABE83064.1); contains InterPro domain Ornithine cyclodeaminase/mu-crystallin; (InterPro:IPR003462) 1.21705546034491 11.6033499964945 2.37308408042298e-07 1.72914483118661e-05 15.3907589315501 14.8256741619355 1.21705546034491 0.111578830962284 AT5G63905_at 4.3306757550049 4.25453998060259 5.37908557747463 5.69475693666815 5.95285112271569 5.29870041152376 3.48902218236151 3.86643049190361 4.54880435756491 4.13109111971978 5.74284379514319 5.49137294732537 5.09968949974456 5.42564848013425 5.33070459051276 5.83965218469669 5.17574588762014 5.16345846423491 4.11515790280183 0.217573872500268 0.213010894443744 0.222815068350879 0.223440778471979 0.226106093417153 0.217795109986921 0.218672594582768 0.218647983897384 0.214915390863218 0.225291874567885 0.214682173715857 0.212540177722792 0.216162103561409 0.214606147582782 0.211566089059350 0.215865188470567 0.217734410397076 0.217962864309838 0.216471984439622 5 5|0 -|/ 25588406 25588702 25588575.857 25588084 25588812 - gene protein_coding_gene TRUE TRUE AT5G63905.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99036.2) 1.36990154872086 11.6001544670990 2.37954446744692e-07 1.72914483118661e-05 15.3883894689130 9.62008644455118 1.36990154872086 0.142262643647304 AT5G51050_at 5.85826101068708 6.0563832185333 6.66486476836718 7.0130741475702 6.71196790525848 6.53125829846682 6.01605629153084 5.93564768147231 5.21040065093272 5.16499654631357 6.3841075227761 6.96793964380837 6.47666294821507 6.43905833575603 6.44451757284213 6.92549008301248 6.37415131326022 6.56036141981699 5.19306609465925 0.188830726879024 0.184659184347800 0.185609499084035 0.184137385632523 0.183061390743253 0.181825041910864 0.185592233053198 0.189951946660545 0.193288959732893 0.191940403365540 0.183401901748310 0.179995516563334 0.189563842275979 0.185268039167820 0.193287514889034 0.179995516563334 0.185670360524686 0.180794229516228 0.185789182191052 5 5 + 20772223 20772868 20772457.909 20770607 20772940 + gene protein_coding_gene TRUE TRUE AT5G51050.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G61810.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); similar to Os06g0604500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058018.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.07287628516360 11.5994759592470 2.38091866449662e-07 1.72914483118661e-05 15.3878862573738 12.228951099688 1.07287628516360 0.0773195548350729 AT5G67630_at 2.49900109660648 2.76340087630062 4.19204193041642 4.08681476477641 3.80459488524016 3.49008351387611 2.57767421388943 2.71739566835967 2.52113722359239 1.37953046471281 3.33738743738277 2.74967996580616 2.57230839406690 2.59789887389321 3.11348136609557 2.72273859706877 2.8913853673372 2.17778703200146 1.73768765471657 0.231509010412646 0.228804834193944 0.244871291690877 0.232175556549685 0.231180356968473 0.236375521071739 0.229114402903706 0.228795224237890 0.24677746675867 0.243494878860025 0.229512682387333 0.226130626007853 0.228977660310277 0.230547924015689 0.231120050555608 0.228761454511132 0.233903423038363 0.229333887824755 0.24457242313025 5 5 - 26984936 26985287 26985127.182 26984607 26986620 - gene protein_coding_gene TRUE TRUE AT5G67630.1 DNA helicase, putative similar to DNA helicase-related [Arabidopsis thaliana] (TAIR:AT3G49830.1); similar to putative DNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD72453.1); similar to RuvB-like 2 [Xenopus tropicalis] (GB:CAJ83917.1); similar to LOC398205 protein [Xenopus laevis] (GB:AAI23266.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.07244870399374 11.5964201123945 2.38711844734613e-07 1.73074835441383e-05 15.3856194596082 5.59126844879004 1.07244870399374 0.07727999865287 AT5G51700_at 6.29859061933141 5.74436484832516 7.02941638482817 6.9321910137031 7.30575858787363 6.99037128195164 5.13622845991892 5.20505996088597 5.21087823714243 4.75722279156301 5.79666022594021 5.83825449130765 5.73547971192918 6.0599091461814 6.0845981018412 6.26359153894782 5.84186925109772 5.68975285052718 4.86283902175883 0.218169737329721 0.213983378269538 0.217232201460020 0.214694780908225 0.210828891126034 0.2186733889706 0.210828891126034 0.227146552965158 0.225623402780904 0.226744485428791 0.220898679552922 0.210828891126034 0.215372519896727 0.217384398395493 0.210828891126034 0.213253950263571 0.21437295379313 0.215809264310809 0.216018590693708 5 5|0 -|/ 21018609 21020261 21019112.3 21018435 21020431 - gene protein_coding_gene TRUE TRUE AT5G51700.1 PBS2 (PPHB SUSCEPTIBLE 2) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation. similar to CHORD [Medicago truncatula] (GB:ABE79345.1); contains InterPro domain CHORD; (InterPro:IPR007051) 1.21924553810361 11.5937883655123 2.39247188048013e-07 1.73096051039252e-05 15.3836666698126 11.7589531937071 1.21924553810361 0.112262456649792 AT5G16510_at 6.5920084975979 6.67326027131263 7.13963499182331 7.54807152195432 7.36915998515085 7.01955366128409 5.91140903333085 6.26798382096465 5.3356447290979 5.33033483597379 6.66290286864235 6.94714082969366 6.72063620363182 6.65151619835568 6.89651630528912 6.65091511197153 6.41915228694475 6.62941075279055 4.82773396854012 0.170047040417971 0.164188192862624 0.166705869924137 0.172346821259547 0.162491326135168 0.182979958826572 0.170614619597363 0.166706478125421 0.177734404291348 0.169743853190669 0.173120629550128 0.162491326135168 0.168492028066169 0.166977181502552 0.162491326135168 0.162491326135168 0.169928752542112 0.173895132488897 0.173279551274433 5 5 + 5393746 5394272 5393976.455 5392608 5394571 + gene protein_coding_gene TRUE TRUE AT5G16510.1|AT5G16510.2 reversibly glycosylated polypeptide, putative similar to RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) [Arabidopsis thaliana] (TAIR:AT3G02230.1); similar to Alpha-1,4-glucan-protein synthase (UDP-forming) [Medicago truncatula] (GB:ABD28560.1); contains InterPro domain Alpha-1,4-glucan-protein synthase (UDP-forming); (InterPro:IPR004901) 1.22032113802298 11.5923537127566 2.395395713871e-07 1.73096051039252e-05 15.3826019109548 12.7460577216951 1.22032113802298 0.112524450161596 AT5G05110_at 8.94540860569228 8.90234606507885 10.2474250508131 10.3041936424197 10.2848791327431 10.0569670024482 8.7485990967918 9.11117189694673 7.17241395094541 8.38561290680504 8.66974240260967 8.06343672755657 8.94178255689744 8.69349999797244 8.21513623315448 8.80547705658946 9.15959720335535 8.8072521297179 7.95581790015009 0.164772513544147 0.173750652946618 0.169746924929223 0.170071643982132 0.174021594469799 0.165514674605896 0.165415440695712 0.169536500724130 0.2194236147545 0.169285496120668 0.168743398119365 0.176021865955698 0.172370469549202 0.186216572161204 0.164220906700806 0.166209357025693 0.173876325992055 0.178112653592877 0.179082334035313 5 5 - 1507691 1508563 1508129.636 1507420 1508868 - gene protein_coding_gene TRUE TRUE AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.2); similar to cysteine proteinase inhibitor [Ricinus communis] (GB:CAA89697.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 1.06401353841338 11.5894292549911 2.40136782554416e-07 1.73101279603788e-05 15.3804309620002 17.8288432071743 1.06401353841338 0.0751304480894362 AT5G38530_at 8.36870748507449 8.51315893432186 9.48416805713091 9.39118967762636 9.11229019833007 8.6501094728782 8.43868011551759 8.38744873937533 6.93107771289922 7.66363876845434 8.45472555520032 8.85526940941456 8.4107844505453 8.7205755363152 8.20383484085172 8.23014807866955 7.75382008856007 8.85079021265347 6.28310383154136 0.170549377261191 0.162741333191451 0.166270253055407 0.169251613658303 0.162741333191451 0.167769659081878 0.167972267069191 0.164749594778860 0.182279983420309 0.170833209128329 0.168904620745415 0.16320320002378 0.167085969932078 0.167632104298527 0.162741333191451 0.166119462665954 0.171801024909806 0.162741333191451 0.193549832498279 5 5|0 +|/ 15442672 15443487 15443096.222 15441268 15443700 + gene protein_coding_gene TRUE TRUE AT5G38530.1 tryptophan synthase-related similar to TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT), tryptophan synthase [Arabidopsis thaliana] (TAIR:AT4G27070.1); similar to putative Tryptophan synthase beta chain [Oryza sativa (japonica cultivar-group)] (GB:BAD37798.1); similar to putative Tryptophan synthase beta chain [Oryza sativa (japonica cultivar-group)] (GB:BAD37797.1); contains InterPro domain Tryptophan synthase, beta chain-like; (InterPro:IPR006316); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926) 1.10408030840685 11.5884100558080 2.40345296310806e-07 1.73101279603788e-05 15.3796742099451 16.4903525646108 1.10408030840685 0.0857881518465757 AT5G39760_at 6.27669927829994 6.50880191193379 6.58943275229812 6.3521474301159 6.85137849639667 7.32096529023563 4.80247325111303 5.32528457584707 4.9233030843784 4.80306544658045 6.2193331269737 6.58362063873948 6.33237050963185 6.57690165209086 5.96294745602380 6.668111030562 6.24638150819887 5.98488737880435 4.42620618634696 0.242273374222524 0.24073413697177 0.236939866769503 0.245275526394496 0.237172359299354 0.243261359537548 0.240367824681596 0.245609400960891 0.236939866769503 0.244918674826302 0.236939866769503 0.243463906730979 0.242282476539447 0.246104421154294 0.254189877811448 0.246688530399277 0.242459468329518 0.238096670418107 0.244586877086364 5 5 + 15929252 15929750 15929542.818 15928644 15930058 + gene protein_coding_gene TRUE TRUE AT5G39760.1 ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor similar to ATHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G28920.1); similar to Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation re (GB:ABE90495.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) 1.32723024741132 11.5812946217464 2.41806512225997e-07 1.73801415933738e-05 15.3743887571278 11.7730699074784 1.32723024741132 0.134495808495828 AT5G58240_at 6.84575562875358 7.01937354490221 7.33758792042422 7.4320542198079 7.89028669345798 7.39391205587688 6.16300621294628 6.32045245835767 5.73981270500444 5.63334388979532 7.22410488231953 7.3019900902074 7.1727522873753 7.15973474129376 7.34411489267929 7.29365923567206 6.8513389111231 6.49196111257378 5.84036250706461 0.204622216036898 0.205557065457913 0.203699905313528 0.205041572307197 0.205978399488482 0.232141272735802 0.206064464006326 0.212041520287243 0.240092068725389 0.224279188939866 0.211890557468577 0.210063188451938 0.220409004462692 0.210709591191993 0.210650612124662 0.20698574549238 0.230606965581311 0.231643008886638 0.219542105281205 5 5|0 -|/ 23575586 23576364 23576029.7 23575340 23576579 - gene protein_coding_gene TRUE TRUE AT5G58240.1|AT5G58240.2 bis(5'-adenosyl)-triphosphatase, putative similar to ATPase-like protein [Sorghum bicolor] (GB:AAO16703.1); contains InterPro domain Histidine triad (HIT) protein; (InterPro:IPR001310) 1.14671528984294 11.5791762767074 2.42243397251857e-07 1.73801415933738e-05 15.3728144519415 13.4717019517043 1.14671528984294 0.0963906964206787 AT5G44730_at 6.55614258841114 6.69161630271838 7.11490067522982 7.29609071774694 8.59881668389574 7.47638776294789 5.42681139861159 5.59885655969462 4.31158787303704 4.76341513563786 6.7135417848356 6.70368705457305 6.21023230063005 6.67885062314396 6.66545950558267 5.74626702508 6.30319844197152 5.72509159066771 4.43498030017289 0.237786383494077 0.244009896786352 0.248600522116285 0.238904836127853 0.245360464659510 0.245662260073816 0.244392127264341 0.237283239079606 0.273360909838423 0.253453408351777 0.242486009487320 0.239208250903384 0.249148529935416 0.243302344330647 0.23873424442581 0.239308157732174 0.251156442419528 0.243881273949791 0.247873053896773 5 5|0 -|/ 18062850 18063539 18063170.8 18062723 18064158 - gene protein_coding_gene TRUE TRUE AT5G44730.1|AT5G44730.2 haloacid dehalogenase-like hydrolase family protein similar to Os02g0173600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046041.1); similar to Os06g0665100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058303.1); similar to haloacid dehalogenase-like hydrolase domain containing 3 [Bos taurus] (GB:NP_001014896.1); contains InterPro domain HAD-superfamily subfamily IA hydrolase, REG-2-like; (InterPro:IPR011949); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 1; (InterPro:IPR006439); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 1.6965777593954 11.5778372932433 2.42519990488092e-07 1.73801415933738e-05 15.3718191688833 12.2682622413703 1.6965777593954 0.200372280837040 AT5G62640_at 7.99666414061833 7.93836056769437 8.79249563114862 8.76503389323795 8.80958041174806 8.66845776025458 7.19850100805113 6.96494607742243 7.1048651767651 7.1288837557398 7.53863563490131 7.88196810669402 7.85115232903556 7.73810203856029 7.8841868803743 7.95068118668318 7.99243014417286 7.71999849759476 7.04778618888342 0.159432980636574 0.163462596876366 0.164782088076542 0.167118079889553 0.169868224284451 0.165404130146946 0.162261173895219 0.165874559390818 0.162861377510105 0.163148912596654 0.159899558296674 0.156873293215637 0.157584329812127 0.158298651017404 0.164834448345589 0.154023190160413 0.164033428455665 0.159918600082074 0.167548012452717 5 5|0 -|/ 25166810 25167482 25167083.6 25166659 25169767 - gene protein_coding_gene TRUE TRUE AT5G62640.1|AT5G62640.2 ELF5 (EARLY FLOWERING 5) nuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC similar to actin binding [Arabidopsis thaliana] (TAIR:AT1G31810.1); similar to putative hydroxyproline-rich glycoprotein DZ-HRGP [Oryza sativa (japonica cultivar-group)] (GB:BAD30150.1); contains domain FAMILY NOT NAMED (PTHR13361); contains domain SUBFAMILY NOT NAMED (PTHR13361:SF1)|similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT1G61080.1); similar to putative hydroxyproline-rich glycoprotein DZ-HRGP [Oryza sativa (japonica cultivar-group)] (GB:BAD30150.1); contains domain FAMILY NOT NAMED (PTHR13361); contains domain SUBFAMILY NOT NAMED (PTHR13361:SF1) 0.980036643719998 11.5618388049058 2.45851497804545e-07 1.75898192485303e-05 15.3599164140838 15.5984996326293 0.980036643719998 0.0485223064998851 AT5G05820_at 4.79805778352618 4.94817323347323 4.99631246658233 5.06741666004985 5.44430772880523 5.24524263448668 5.08179049272844 5.08310059811034 4.85166522415116 4.54696467260726 6.52197429553151 7.02087748737382 6.33685607684116 6.22502838945749 7.17846753266984 6.2012971762513 5.55619277346332 6.14507726694512 4.6064012351592 0.228062657913310 0.231395354329932 0.236818851731751 0.227100413909064 0.227100413909064 0.237593159623383 0.232910816428293 0.236934964810748 0.242319040077455 0.234257556746572 0.229420587086887 0.231088410808723 0.237034040014173 0.229331201841765 0.23575042346529 0.227100413909064 0.246730314462127 0.232937249880600 0.227100413909064 5 5 - 1752145 1753482 1752690.818 1751689 1754179 - gene protein_coding_gene TRUE TRUE AT5G05820.1 phosphate translocator-related similar to organic anion transporter [Arabidopsis thaliana] (TAIR:AT3G11320.1); similar to plastidic phosphate translocator-like protein2 [Mesembryanthemum crystallinum] (GB:BAD91177.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.970208504849483 11.5500806622628 2.48331730993801e-07 1.77380006752841e-05 15.3511556271967 10.6163327424482 0.970208504849483 0.0448672652377383 AT5G41990_at 8.2091823198043 8.30352003909123 9.42463255730096 9.20672416160723 9.6283269017119 9.25185728476017 8.10037573210817 7.86688709763522 7.77582489248435 8.0188637842814 9.15274154634951 8.90889854047101 8.79615151077012 9.08603209797924 8.69649680887184 9.29085979485808 8.63385412868805 8.75133498639129 8.10100641001586 0.141744472273302 0.138717827261415 0.137641353286575 0.137659092933497 0.139490093736150 0.149265580725778 0.140707730899774 0.145839354796158 0.161543235254551 0.144432175180433 0.137884558182745 0.139048712167795 0.135352259920034 0.136473011909541 0.144929077742293 0.135279378629508 0.157268032443192 0.142942480711841 0.145911717487378 5 0|5 /|- 16812387 16812852 16812569.4 16812195 16815234 - gene protein_coding_gene TRUE TRUE AT5G41990.1 WNK8 (Arabidopsis WNK kinase 8); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G64630.1); similar to ZIK1 protein [Medicago sativa] (GB:CAC84087.1); similar to Os02g0672800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047709.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.10360420519443 11.5340093338269 2.51765902465037e-07 1.79537211183094e-05 15.3391635623414 17.1888271979480 1.10360420519443 0.086981273049802 AT5G50800_at 7.6441021422417 8.0497914513354 9.46733271099448 9.60463666439897 9.1875897150629 9.2910105076069 9.71016739858692 9.96016535854307 6.33712165088683 6.66355585647967 7.73359762638423 6.95012289993734 9.44621960087284 8.58071824205294 5.95909170558786 8.7704216272141 9.59536053531387 7.60062845839906 6.24556824458208 0.182655422431410 0.178104656051753 0.183248564983190 0.188377866336823 0.181562402790526 0.182990389210922 0.184668355764726 0.182633759552997 0.206599871574833 0.204778131196655 0.188709420035361 0.182613160226536 0.182954618183560 0.185625563462040 0.203650146223375 0.176913404853417 0.184302837188738 0.187482097983049 0.190837578454993 5 5|0 -|/ 20682551 20683663 20682911.4 20682303 20684530 - gene protein_coding_gene TRUE TRUE AT5G50800.1 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G25010.1); similar to N3 like protein [Medicago truncatula] (GB:CAC44123.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 1.10534532407990 11.5237327196403 2.53988897498486e-07 1.80825045340628e-05 15.331484711577 16.3618171624062 1.10534532407990 0.087667352782141 AT5G26910_at 5.37644660945689 5.08838181950952 5.67745328851247 5.74043795326267 5.96986154556995 6.06353946693126 4.94990107225565 4.85888779398092 6.18221247140381 5.69515670201011 7.57457547519789 7.30595625859306 6.66917373988075 7.27272692821413 7.11109895237377 6.9934991041742 6.39801089193758 6.65317284393984 5.52261999636083 0.207926676935882 0.204333780601834 0.212246399685957 0.20890694121682 0.208791014383016 0.219769546522637 0.211398823666584 0.213938449076619 0.220372615614524 0.216354402312824 0.204333780601834 0.204333780601834 0.206237812100581 0.205657919824957 0.207948992044101 0.204333780601834 0.210950184133827 0.204364903714351 0.216508330402443 5 5 - 9466183 9466711 9466470.364 9465932 9470406 - gene protein_coding_gene TRUE TRUE AT5G26910.1|AT5G26910.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58650.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.1); similar to srpA [Streptococcus cristatus] (GB:AAF34780.1); similar to Os03g0831700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051796.1); similar to Os03g0302900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049873.1); contains domain Nitric oxide (NO) synthase oxygenase domain (SSF56512)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.1); similar to Os03g0831700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051796.1); similar to Os03g0302900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049873.1); similar to Subtilisin-like serine protease [Pediococcus pentosaceus ATCC 25745] (GB:YP_803612.1); contains domain Nitric oxide (NO) synthase oxygenase domain (SSF56512) 0.995849562066164 11.5202005141226 2.54757892490913e-07 1.81075192202851e-05 15.3288434661413 11.8642502757918 0.995849562066164 0.0558104271545149 AT5G26780_at 7.90289282302691 7.92939818210916 8.68478308443446 8.65419680032135 8.88411473962317 8.77481677583415 8.65287036920027 8.50059905716747 7.16280053140048 7.6532337060632 8.8648098321185 8.92501137459216 8.52770309456608 8.77857386701912 8.958235876542 8.82468464691143 8.59772385761242 8.68495244456576 7.34972767786883 0.13373072223373 0.136136195678598 0.134541329486683 0.129338214785672 0.137261930355074 0.138207667272080 0.130869005105630 0.131651088427753 0.149529716196592 0.138697182654149 0.133991966017568 0.129765503875109 0.132007567711306 0.130155085775832 0.132254714626150 0.135393513363040 0.132999306636375 0.136993432374213 0.141033719018557 5 5|0 +|/ 9420154 9421668 9420685.7 9418198 9422159 + gene protein_coding_gene TRUE TRUE AT5G26780.1|AT5G26780.2|AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); glycine hydroxymethyltransferase Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1. similar to SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1), glycine hydroxymethyltransferase [Arabidopsis thaliana] (TAIR:AT4G37930.1); similar to Glycine hydroxymethyltransferase [Medicago truncatula] (GB:ABE84180.1); similar to Serine hydroxymethyltransferase, mitochondrial precursor (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (GB:P50433); similar to Serine hydroxymethyltransferase 1, mitochondrial precursor (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (GB:P49357); contains InterPro domain Glycine hydroxymethyltransferase; (InterPro:IPR001085) 0.942331155653712 11.5027098360196 2.5860328352582e-07 1.83454896854571e-05 15.3157500887955 16.5773585686405 0.942331155653712 0.0331844003658539 AT5G67470_at 5.20986643124218 5.9400326602149 6.705286321368 7.20394995581342 5.27571623919433 5.2007883342293 3.6698329492706 3.94253611043459 4.52169011534283 3.84716432272969 6.45050949650118 6.42644110694869 4.43966043901768 5.86028177823275 6.05926735217385 5.94618364921685 4.25906391189785 5.60963378731597 4.00002618676106 0.248648643835929 0.247434297984152 0.247645555246204 0.246090114344071 0.244856443415281 0.25949163856545 0.251314007765559 0.240172196995157 0.239940705337674 0.247893113921647 0.240705439019572 0.244437429323684 0.243513338235505 0.250900564155517 0.249226421490787 0.244299467684075 0.250839708514127 0.240163393245148 0.244177542135941 5 5 + 26946875 26947413 26947208.727 26943939 26947696 + gene protein_coding_gene TRUE TRUE AT5G67470.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to AFH1 (FORMIN HOMOLOGY 1), actin binding [Arabidopsis thaliana] (TAIR:AT3G25500.1); similar to Os03g0204100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049309.1); similar to Actin-binding FH2 [Medicago truncatula] (GB:ABE77423.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) 1.45714407837297 11.5011368589286 2.58952190067422e-07 1.83454896854571e-05 15.3145713849489 10.2706713244414 1.45714407837297 0.160651161082690 AT5G03690_at 5.44748764903259 5.08957315604943 6.41156032546636 6.24258897284064 6.53822561005541 6.6832516331984 5.51354343172063 4.90175626143722 4.85668279275118 5.22821350472084 6.18577075041833 6.58236155304667 6.04939385377097 6.10561701915859 6.09241641215778 6.52614131008177 6.53370423112926 6.16346634106606 4.71959961291212 0.168027317981135 0.169525858285783 0.16091044064709 0.166277149423308 0.165090749925672 0.164727179765521 0.163740400083656 0.178752458524939 0.183168067240016 0.176605896230679 0.168114871969939 0.170385874948528 0.171490804607513 0.170802696439030 0.174956512248904 0.169295135939513 0.164252077971292 0.177382684088446 0.168253458103337 5 5 - 963438 963922 963666.364 963147 965049 - gene protein_coding_gene TRUE TRUE AT5G03690.1|AT5G03690.2 fructose-bisphosphate aldolase, putative similar to fructose-bisphosphate aldolase, putative [Arabidopsis thaliana] (TAIR:AT2G36460.1); similar to Fructose-bisphosphate aldolase, class-I [Medicago truncatula] (GB:ABE84500.1); contains InterPro domain Fructose-bisphosphate aldolase, class-I; (InterPro:IPR000741) 1.28792173727793 11.4992291271990 2.59376036700813e-07 1.83455407620546e-05 15.3131415711992 11.4608438319659 1.28792173727793 0.128570437094845 AT5G24570_at 9.33876477183212 9.47614740730236 9.8404444442312 10.0104823051322 10.7131284750670 10.5118615905087 9.28091016098447 9.4286536173714 9.52606911596475 9.22503684748798 10.7074784578738 10.4244211158436 10.2608795339507 10.5069116449544 10.3317461391985 10.5559225094617 9.70540467852442 10.2915639607060 8.96904792885851 0.100719729811108 0.102453855948382 0.102148435929578 0.100623628289481 0.101207665213327 0.104188326994336 0.099040107451355 0.107508673521617 0.111935993216596 0.103661187513406 0.101769643215270 0.098435795155082 0.100606875845850 0.102017878796495 0.107611582260564 0.102487614354413 0.104493440805147 0.104744986896867 0.100855729987774 5 5 - 8405818 8406004 8405908.727 8405684 8406135 - gene protein_coding_gene TRUE TRUE AT5G24570.1 unknown protein 0.997924960994607 11.4910921410985 2.61192347749593e-07 1.84315709328431e-05 15.3070397954221 19.6190952478043 0.997924960994607 0.0574279106414161 AT5G06780_at 5.86731636643296 5.913538708711 6.70895743822822 6.80576654030603 7.16455238683995 6.9464419280211 4.83217011962498 5.09845385157802 5.69622571208784 5.70836489092877 6.74042502615272 6.39896336369455 6.3877353093985 6.15562716237204 6.09775481237209 6.33469353755515 5.67357077842286 6.01238760768549 5.63211717876198 0.190432346305823 0.189326539036218 0.195288586974213 0.194069683848434 0.193434970925429 0.199207497320751 0.201433739908714 0.194144878240075 0.198723233650257 0.189326539036218 0.192094341684020 0.189326539036218 0.190849737821195 0.207051258381331 0.208850208164341 0.189326539036218 0.196891793853719 0.198108991501082 0.189326539036218 5 5|0 -|/ 2094148 2095696 2094567.8 2093927 2097130 - gene protein_coding_gene TRUE TRUE AT5G06780.1 emsy N terminus domain-containing protein / ENT domain-containing protein similar to emsy N terminus domain-containing protein / ENT domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G12140.2); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87186.1); similar to Os08g0328300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061559.1); similar to Os09g0279000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062755.1); contains InterPro domain ENT; (InterPro:IPR005491) 1.01240095877128 11.4877590142409 2.61940347222747e-07 1.84315709328431e-05 15.3045388297489 12.1191733142842 1.01240095877128 0.0623927957909267 AT5G13010_at 8.04405290369277 7.91168082912419 9.11588999743713 8.97681609106757 9.18039933775377 9.01900194384375 7.5091792056517 7.69332755250957 8.07426341638682 8.09867616916577 8.95179728983771 8.98231118218269 8.99013035573817 8.66383478282495 8.29976662804516 9.04794938667836 8.9084065636685 8.7806666602594 8.2362853822599 0.162792876107107 0.150960306290830 0.157552247352906 0.157165452414152 0.156529549771078 0.150908239400626 0.160290870591535 0.168584208263408 0.177729972781795 0.158034553321999 0.151589129235399 0.146347067494794 0.155036611118215 0.157416210219650 0.164621380312131 0.146282107046443 0.155707170380477 0.153054584399740 0.149796048778625 5 5 + 4128122 4128628 4128322.364 4122423 4128864 + gene protein_coding_gene TRUE TRUE AT5G13010.1 EMB3011 (EMBRYO DEFECTIVE 3011); RNA helicase similar to MEE29 (maternal effect embryo arrest 29), ATP-dependent RNA helicase [Arabidopsis thaliana] (TAIR:AT2G35340.1); similar to ATP-dependent RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT3G26560.1); similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733), ATP-dependent RNA helicase [Arabidopsis thaliana] (TAIR:AT1G32490.1); similar to DEAH-box RNA helicase [Chlamydomonas reinhardtii] (GB:AAG33228.2); similar to mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL55058.1); similar to hypothetical protein LOC393850 [Danio rerio] (GB:NP_957170.1); contains InterPro domain Helicase-associated region; (InterPro:IPR007502); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain Protein of unknown function DUF1605; (InterPro:IPR011709); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.987583126665602 11.4872571157866 2.62053181819715e-07 1.84315709328431e-05 15.3041621608497 16.9135515720143 0.987583126665602 0.0538485524472231 AT5G57660_at 11.2864762689507 11.3111555514608 11.9747425320941 11.9790451960991 12.4283339225041 12.3156152760187 11.4545929169777 11.4139874302046 11.1824441988536 10.9837451681086 12.3168724974572 12.2257728866743 12.184000713538 12.2135414684398 11.8683782063791 12.2391328125498 12.1217860872688 11.7332269904806 11.0548352204779 0.072464706353831 0.0695770807840992 0.0755446106245924 0.0717097230256875 0.0724038037781904 0.0761176903850775 0.0759297591396788 0.0748817465092763 0.078781193206551 0.0717178158026978 0.0710215099601989 0.0698296759200502 0.0739755458613983 0.0715235299806388 0.0744456058567306 0.0695770807840992 0.0722860766030496 0.0720522253482993 0.0706883985401726 5 5|0 +|/ 23373306 23373931 23373694.7 23372690 23374215 + gene protein_coding_gene TRUE TRUE AT5G57660.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 5 (COL5) [Arabidopsis Thaliana] (GB:Q9FHH8;GB:Q8L9H4;GB:Q93ZC8); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT5G24930.1); similar to Zinc finger, B-box; CCT [Medicago truncatula] (GB:ABE83395.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.923522642574498 11.4861920400310 2.62292802619543e-07 1.84315709328431e-05 15.3033627677974 23.3637505469530 0.923522642574498 0.0211819747791932 AT5G57655_at 7.59477503485747 7.75359686936495 8.51552502647682 8.58845558457795 9.67561161146708 8.87919028576852 6.63900610455098 6.52904918108293 6.71288576343067 5.77119093771197 6.94138344660213 6.40272301677191 7.30388396988005 7.49798599525177 7.0310396895148 7.22565736639772 7.3242500745551 7.09305607539864 6.04110629276688 0.214505083888122 0.204121074923106 0.224002186400317 0.219704070034755 0.210408299105135 0.232391219257464 0.222795142603589 0.209359780543258 0.202562927903253 0.219178549417593 0.207299011227166 0.211859228231965 0.217005510584696 0.209610689388595 0.21411353905248 0.213378132569367 0.210046415989378 0.209253039749010 0.215723981662657 5 5 + 23364845 23365899 23365511.364 23363986 23367265 + gene protein_coding_gene TRUE TRUE AT5G57655.1|AT5G57655.2 xylose isomerase family protein Identical to Xylose isomerase (EC 5.3.1.5) (XYLA) [Arabidopsis Thaliana] (GB:Q9FKK7); similar to Xylose isomerase [Medicago truncatula] (GB:ABE83402.1); contains InterPro domain Xylose isomerase-like TIM barrel; (InterPro:IPR012307); contains InterPro domain Xylose isomerase; (InterPro:IPR001998)|Identical to Xylose isomerase (EC 5.3.1.5) (XYLA) [Arabidopsis Thaliana] (GB:Q9FKK7); similar to Xylose isomerase [Medicago truncatula] (GB:ABE83402.1); similar to Xylose isomerase (GB:Q40082); similar to xylose isomerase [Hordeum vulgare subsp. vulgare] (GB:CAA64544.1); contains InterPro domain Xylose isomerase, bacterial type; (InterPro:IPR013452); contains InterPro domain Xylose isomerase-like TIM barrel; (InterPro:IPR012307); contains InterPro domain Xylose isomerase; (InterPro:IPR001998) 1.35651264296759 11.4815350442976 2.63343336450091e-07 1.84754489676468e-05 15.2998664004473 14.6606804384015 1.35651264296759 0.142381054034054 AT5G14500_at 5.61749404123337 5.2996478264534 7.05804224009239 6.81587841543385 7.4138829765349 6.84301976582288 6.91838023225601 6.40371509172039 4.82298169052562 5.04801800228362 6.5718195533712 6.96761185629177 6.31317603809355 6.70027737138905 6.32203137694774 6.79093105395036 7.23640426879103 6.80245420069086 4.82628646648219 0.237042879923496 0.238590741263441 0.234549897851791 0.240817805167676 0.229973647386089 0.234727567694404 0.237187567262329 0.231819335735566 0.233157274617568 0.237449436917838 0.229973647386089 0.229973647386089 0.235398810799646 0.234214005661812 0.235171780553007 0.229973647386089 0.238355535269137 0.236907672789999 0.243537476905191 5 0|5 /|- 4674521 4675369 4674922.667 4674236 4676768 - gene protein_coding_gene TRUE TRUE AT5G14500.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G01590.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE86317.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) 1.39344469003272 11.4574977795329 2.68838981149606e-07 1.88305382577036e-05 15.2817923633155 12.3523493743790 1.39344469003272 0.149913145724043 AT5G67590_at 10.2137405669501 10.1489091184367 11.1100754881745 11.0180802862974 10.9929958772321 10.7486444488189 10.2712965129262 10.1680000849473 10.1374926997421 9.8037928424621 11.148136339642 11.1572759907939 10.8108462967216 10.9250775485148 11.2604556090689 11.0019216052714 11.0358936478851 11.0000188363608 9.64519326363336 0.0723705301736838 0.0736967402510536 0.0735158067393254 0.0715749926318565 0.0712436099469518 0.0731304686401843 0.073041153527262 0.074352460921766 0.0783150286881022 0.0779217596208066 0.0739755866713196 0.0731399881916651 0.0721488309796076 0.0748893102666224 0.0755189192219518 0.0712436099469518 0.075947527636692 0.0756129312327182 0.0771193982314111 5 5 + 26975309 26976525 26975675.273 26975227 26976783 + gene protein_coding_gene TRUE TRUE AT5G67590.1 FRO1 (FROSTBITE1) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain. similar to NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa] (GB:ABK78688.1); contains InterPro domain ETC complex I subunit conserved region; (InterPro:IPR006885) 0.973628043326054 11.4463803098683 2.71422850303016e-07 1.89358924919590e-05 15.2734173911785 21.036274216087 0.973628043326054 0.049869780287213 AT5G09300_at 3.57429022799725 3.77260408824536 4.46165893636532 4.50611880166229 4.33128339916402 4.41903435286574 2.95532702188693 3.10397429287244 3.41342867049478 3.18463658889216 4.05230165664541 3.94011608908086 4.18031965180794 4.11041717081642 4.44950804307499 4.60396628937898 3.80292975364972 3.8942918184275 3.23712617295033 0.207664364755395 0.211290228258943 0.207045902102475 0.214535090735531 0.211950432212073 0.208023263549113 0.205912817352621 0.216019851788036 0.208168970732792 0.205639019074569 0.205130386813301 0.205130386813301 0.208968294971694 0.214914850721885 0.217922043607354 0.207951901566379 0.215363096520292 0.206420235443482 0.218324667895390 5 5|0 -|/ 2884285 2885073 2884553.444 2884180 2886864 - gene protein_coding_gene TRUE TRUE AT5G09300.1|AT5G09300.2 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative similar to 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative [Arabidopsis thaliana] (TAIR:AT1G21400.1); similar to Os12g0183100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066324.1); similar to 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95968.2); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) 0.964404564880825 11.4453942651272 2.71653322769303e-07 1.89358924919590e-05 15.2726741118164 7.59435061674374 0.964404564880825 0.0461447292976727 AT5G53470_at 7.10085584063865 6.97646053150622 7.48497270203016 7.75096338418072 8.06382710822422 7.83479175809647 6.90823833802495 7.17302150814073 6.59527117736599 6.09621762007549 7.90934297807279 7.75337169765927 7.68142066454242 7.74415134993904 7.51358004708294 7.57581767315805 7.82490338647635 7.39037499811074 6.17483635274069 0.160776354854904 0.154020657719345 0.159822484872288 0.156216207739073 0.170028992619460 0.156391041120309 0.171012159834767 0.165165513438081 0.171794403518159 0.162686482324997 0.15438073899442 0.154020657719345 0.160594838723671 0.155678805828769 0.160966315130451 0.154020657719345 0.175894035417778 0.159339293195806 0.167762231727257 5 5|0 +|/ 21728584 21729539 21729045.8 21727577 21729836 + gene protein_coding_gene TRUE TRUE AT5G53470.1 ACBP1 (ACYL-COA BINDING PROTEIN) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower. similar to ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2) [Arabidopsis thaliana] (TAIR:AT4G27780.1); similar to membrane acyl-CoA binding protein [Agave americana] (GB:AAT81164.1); contains InterPro domain Acyl-coA-binding protein, ACBP; (InterPro:IPR000582); contains InterPro domain Ankyrin; (InterPro:IPR002110) 1.06466999143736 11.4415472988500 2.72554527849882e-07 1.89682164546307e-05 15.2697735315967 14.3930890960757 1.06466999143736 0.0790752934175325 AT5G07710_at 4.96695614404188 5.39092685536099 6.41751441305991 6.47100387197185 6.52263663766726 5.9931461872679 4.31377016702617 4.37662775755678 4.52826678388513 4.58867941073639 4.9763877827122 5.29458391748251 5.41348488881887 5.18718760105727 5.33680896749741 5.60238781713949 5.98237872646378 5.61088735988597 4.54154861889121 0.222826563466009 0.217475237692299 0.222506041030081 0.218711476631793 0.226523001387465 0.220687728501232 0.222076812332833 0.224092407657531 0.226741516946835 0.217276598670997 0.213476352575224 0.217536824508881 0.216731032037544 0.222077583110217 0.215348973567796 0.225039579709400 0.225565929598672 0.213476352575224 0.222018279292286 5 5 + 2454656 2455318 2454929.545 2453136 2455547 + gene protein_coding_gene TRUE TRUE AT5G07710.1 exonuclease family protein similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT5G61390.1); similar to Os10g0407500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064570.1); similar to exonuclease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66074.1); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 1.23084341231161 11.4373181376187 2.73549021189001e-07 1.90069187329475e-05 15.2665834167369 10.5457452478123 1.23084341231161 0.118251368145929 AT5G46050_at 8.21799713127217 8.60566335853254 9.16108803290647 9.45749608312893 9.39858308532525 7.9456211344842 1.34249327871748 1.16501872528625 2.28055770263573 2.09781047237124 1.83089568172300 2.35907231052820 2.59496684711085 1.98340304580103 1.59050139355004 2.16538538631763 2.00365535615951 1.68463305483218 1.66523303703103 0.26388621472129 0.260957848145904 0.276479712044584 0.269081217023211 0.260508151804154 0.283063660256598 0.256160341961594 0.265052212091916 0.264412308459617 0.282752254769130 0.254866461713666 0.261699246325078 0.254120395580739 0.259277055608802 0.254834887777679 0.258236129138657 0.257271386787441 0.256990644311184 0.263977358963561 5 5 - 18692367 18692887 18692651.455 18692262 18696373 - gene protein_coding_gene TRUE TRUE AT5G46050.1 ATPTR3/PTR3 (PEPTIDE TRANSPORTER PROTEIN 3); transporter similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G46040.1); similar to putative nitrate transporter NRT1-3 [Glycine max] (GB:BAB19758.1); similar to Os10g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064823.1); similar to putative peptide transport protein [Oryza sativa] (GB:AAG21898.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 2.08496717883295 11.4343706248218 2.74244466548293e-07 1.90247517551394e-05 15.2643592225694 8.93229403963106 2.08496717883295 0.267017148728404 AT5G13610_at 5.1757126379789 5.49902302595906 6.95004167481216 6.75766622518642 6.57370583443807 6.17506723550729 5.35469572174389 5.66581942679877 5.05753497138681 4.77282665048156 6.14499863860895 6.12950636699623 6.3146294513567 6.24451024318835 6.20601402308881 6.1108481627194 5.89047988056509 6.53592748840621 5.21036128042447 0.193296558115440 0.182201654765714 0.192706850554268 0.195199242759280 0.181275374808088 0.189462220828758 0.197780261716818 0.187729454830149 0.186947570369762 0.187907191258963 0.183678279053686 0.188007012270802 0.204864811241935 0.185056815304509 0.184796432829329 0.183528952598461 0.189700227055643 0.183898638752161 0.182385566453033 5 5|0 +|/ 4383877 4384787 4384391.778 4383016 4385032 + gene protein_coding_gene TRUE TRUE AT5G13610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69380.1); similar to Os07g0694800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060742.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL53488.1); similar to Os01g0764300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044340.1); contains InterPro domain Protein of unknown function DUF155; (InterPro:IPR003734) 1.18692376023388 11.4251629594041 2.76429366579421e-07 1.91042846598052e-05 15.2574066439025 11.6243107641183 1.18692376023388 0.109072307933992 AT5G41190_at 5.67484349493567 6.09174203009091 6.66178613057944 6.47502348950846 6.36084218465854 6.67158338017172 5.55662446157146 5.6380582585522 4.39517269544689 4.70837978040293 6.00489690226642 6.61376106405063 6.18182437613612 5.70978037523144 6.86117192305748 6.2667096688294 6.37966528491399 5.97906206656658 5.25658806444278 0.231759312370505 0.218705808917361 0.230342522440019 0.231032218157459 0.224139311908919 0.218705808917361 0.224157588029146 0.220772486587128 0.239600274985824 0.228242570182853 0.218705808917361 0.219560327177035 0.221785717243532 0.225601200304416 0.227812214005267 0.218705808917361 0.229778886580625 0.249813233829206 0.232230893797375 5 5|0 -|/ 16504863 16505768 16505302.333 16504703 16507329 - gene protein_coding_gene TRUE TRUE AT5G41190.1 similar to unnamed protein product; gene_id:MEE6.26 unknown protein [Medicago truncatula] (GB:ABE92144.1); contains domain RNA-BINDING PROTEIN NOB1 (PTHR12814) 1.13244358957131 11.4243082815237 2.76633132459943e-07 1.91042846598052e-05 15.2567609448915 11.6594741642897 1.13244358957131 0.0966438991574385 AT5G62630_at 10.5189856769758 10.6037903805728 10.8723851745822 10.9131354555416 11.2884119226704 11.1858912381162 9.49865745052204 9.40485534529931 9.4879808105352 9.26248258615396 10.1061004505973 10.4705854197384 10.4097290683714 10.4479211511230 9.6170223890189 10.097411757151 10.4020225882402 10.1706934915009 9.49588319374577 0.0771684177367966 0.0771684177367966 0.080089608079861 0.0837908180278292 0.077395890950088 0.0776269829736051 0.0797563233303256 0.0832395968758465 0.100356297011903 0.0816762779060684 0.079299480759734 0.0775446041184885 0.0819891354538254 0.0845581139304936 0.0840886256909265 0.0771684177367966 0.0826315413903201 0.0799231969320193 0.083108185830682 5 5 - 25160988 25161585 25161262.273 25160821 25163685 - gene protein_coding_gene TRUE TRUE AT5G62630.1 HIPL2 (HIPL2 PROTEIN PRECURSOR) Identical to HIPL2 protein precursor (HIPL2) [Arabidopsis Thaliana] (GB:Q94F08;GB:Q9LV15); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39970.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74790.1); similar to hypothetical protien [Hordeum vulgare subsp. vulgare] (GB:AAV49993.1); similar to glucose/sorbosone dehydrogenases-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30151.1); similar to unnamed protein product [Triticum tur (GB:CAJ13560.1); contains InterPro domain Soluble quinoprotein glucose dehydrogenase; (InterPro:IPR011041) 0.929060330187214 11.4239742209759 2.76712821064716e-07 1.91042846598052e-05 15.2565085502255 20.3510814070080 0.929060330187214 0.0290411037657171 AT5G38900_at 7.1575979651917 7.20880981971448 8.64396523356187 8.60667696058517 7.24542250023667 6.48495592279916 2.36568492604165 2.37220422844928 3.22470770325889 3.21332148799546 2.53303758376139 2.87411416348260 2.8866905402955 2.76780496764278 2.49600399711257 2.62276110092743 3.46398437259896 2.24555806490651 2.8990827476464 0.255845290461364 0.261505658295104 0.255457059606277 0.261129332168239 0.263042145601177 0.251670167540969 0.251756560246125 0.25232703441116 0.250019419144304 0.250774096773855 0.250067302383679 0.24877443023015 0.247871137812201 0.25655609903634 0.254973604071741 0.247871137812201 0.262844301756609 0.254105778772366 0.257878726821423 5 5|0 -|/ 15590979 15592094 15591421.875 15590735 15592848 - gene protein_coding_gene TRUE TRUE AT5G38900.1 DSBA oxidoreductase family protein similar to DSBA oxidoreductase [Medicago truncatula] (GB:ABE87781.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain DSBA oxidoreductase; (InterPro:IPR001853); contains InterPro domain Disulphide-bond formation facilitator, insertion; (InterPro:IPR010986) 1.29652731099358 11.4204784804423 2.77548213051573e-07 1.91314960519684e-05 15.2538668579966 9.1849721921431 1.29652731099358 0.132062932239784 AT5G43810_at 6.31504446792212 6.76787052597813 6.65662424658942 6.88234509208725 7.86706899249215 7.24057470575293 6.33001004169225 6.23616448368388 3.98545860527457 5.5872529189202 6.95474328356253 7.61851466471718 7.22756227893638 6.61661516501475 6.83420788771969 7.36250722211825 6.47011290941286 6.76966119960653 5.59234839340968 0.207658251074238 0.21182926035348 0.200417848314914 0.212285936823704 0.200104751410206 0.215727160211095 0.195768426162872 0.196040757076052 0.222450266004987 0.202254191306576 0.204794198288 0.208062169270579 0.205776945399189 0.216991049922236 0.202342522667094 0.201827302951493 0.224178127978209 0.217134089467342 0.198903444301427 5 0|5 /|+ 17633014 17633733 17633407.2 17628199 17634024 + gene protein_coding_gene TRUE TRUE AT5G43810.1 ZLL (ZWILLE) Translation initiation factor. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Identical to Protein PINHEAD (Protein ZWILLE) [Arabidopsis Thaliana] (GB:Q9XGW1;GB:O49256); similar to argonaute protein, putative / AGO, putative [Arabidopsis thaliana] (TAIR:AT2G27880.1); similar to AGO1 (ARGONAUTE 1) [Arabidopsis thaliana] (TAIR:AT1G48410.1); similar to AGO1-1 [Nicotiana benthamiana] (GB:ABC61502.1); similar to ZLL/PNH homologous protein [Oryza sativa (japonica cultivar-group)] (GB:BAB96813.1); similar to ZLL/PNH homologous protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33046.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain Stem cell self-renewal protein Piwi; (InterPro:IPR003165) 1.33805074163128 11.4164610077585 2.78511674571524e-07 1.91674349242650e-05 15.2508296908560 12.8053430939852 1.33805074163128 0.140302772665310 AT5G43280_at 6.37205887743107 6.64622007383154 7.36948757915614 7.69451018653907 7.91879095789528 7.61014835935752 6.30471198310957 6.85015461027653 5.93982129709498 5.95030636320448 7.37987670635909 7.44430440639978 7.33367690325436 7.43767844128274 7.40069633312911 7.65316180843937 7.24502985560002 7.2574265704323 5.8701613842648 0.206473663501154 0.19924518772553 0.205126170415032 0.205930696011629 0.200794972992055 0.206237087474259 0.197697018374633 0.201036677113967 0.215541516391265 0.206922212739692 0.199089402587498 0.198727579007080 0.203978701412142 0.201817072494844 0.201796472905736 0.197576791517263 0.208256970470020 0.197576791517263 0.217428579594597 5 5 + 17385442 17386279 17385740.182 17385116 17386627 + gene protein_coding_gene TRUE TRUE AT5G43280.1|AT5G43280.2 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1); delta3,5-delta2,4-dienoyl-CoA isomerase/ enoyl-CoA hydratase|ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination. similar to enoyl-CoA hydratase, putative [Arabidopsis thaliana] (TAIR:AT4G16800.1); similar to Os01g0925200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045254.1); similar to enoyl-CoA hydratase [Pseudomonas fluorescens PfO-1] (GB:YP_348613.1); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753)|similar to enoyl-CoA hydratase/isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G16210.1); similar to Os01g0925200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045254.1); similar to GA21887-PA [Drosophila pseudoobscura] (GB:EAL32000.1); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753) 1.28941645724942 11.4019628416631 2.82018958018186e-07 1.93511130531355e-05 15.2398584783457 13.7527991915997 1.28941645724942 0.131062143895297 AT5G23540_at 9.95015633384115 9.99288773683403 10.9010388161352 10.8665589029204 10.6567377491321 10.5321308065972 9.7913469813268 9.6834187017778 9.69644776741552 9.25898253232911 10.5506865284751 10.3643340688250 10.3536850705322 10.4026082278506 10.4805554353315 10.3342529162909 10.3158935603147 10.3826909721149 9.32005317934124 0.0671989703328345 0.0708640476274274 0.0698727920762395 0.0681123948292693 0.0708997447927062 0.0715006989970364 0.0696142708647295 0.0707133610130019 0.070647610988361 0.0736624551246847 0.0670285909652421 0.0670285909652421 0.0678325975102444 0.0697741638055187 0.0679535599971189 0.0681388630022897 0.0726154455064162 0.0670285909652421 0.0687659036652603 5 5|0 +|/ 7938391 7939308 7938911.8 7937672 7939578 + gene protein_coding_gene TRUE TRUE AT5G23540.1|AT5G23540.2 26S proteasome regulatory subunit, putative Identical to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11) (RPN11) [Arabidopsis Thaliana] (GB:Q9LT08;GB:Q8LD11); similar to AJH2 (COP9-signalosome 5B), protein binding [Arabidopsis thaliana] (TAIR:AT1G71230.1); similar to Mov34-1; Flagellar motor switch protein FliG-like [Medicago truncatula] (GB:ABE79516.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639); contains InterPro domain Flagellar motor switch protein FliG-like; (InterPro:IPR011002) 0.928795659011416 11.4009427768228 2.82267526577698e-07 1.93511130531355e-05 15.2390859290811 20.2084092571517 0.928795659011416 0.0300688346591803 AT5G11810_at 9.04512134336156 9.08877629579844 9.64747362574794 9.70886899644704 9.92067569501737 9.43423890389285 8.3367606491062 8.5095915717551 8.43740774462748 8.49697904139155 9.59838002460502 9.5637910461702 9.3474742249007 9.6777916689658 9.71307579665294 9.52474204539232 9.01194199214985 9.51867470999679 7.72447616786909 0.126765649490113 0.11998192152748 0.123735974304956 0.120747961890278 0.119237925135304 0.129020983886587 0.130371624002864 0.124275207384738 0.134738411090791 0.124417292193610 0.118614498755413 0.119276766344376 0.117060464826494 0.117060464826494 0.120665494317045 0.118204875167848 0.135677019314122 0.129075432891855 0.141480571046794 5 5|0 +|/ 3809683 3810372 3809981.222 3808721 3810749 + gene protein_coding_gene TRUE TRUE AT5G11810.1 similar to Os02g0135600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045818.1) 1.1038073971229 11.3992554930494 2.82679205662521e-07 1.93511130531355e-05 15.2378078762458 18.0684908467576 1.1038073971229 0.0902818777234656 AT5G24830_at 4.2639522388342 4.17286640861957 5.22236675453965 5.05356125309897 5.6158537341153 5.41790527733992 4.45450618925101 4.15946713672501 3.89489968249358 3.86561564253865 5.06485833478597 4.57957378997279 4.66161306623118 5.07786625111835 5.3230251592772 5.14135598120572 5.27642295052441 4.89418450283239 4.27291205545265 0.225713975542582 0.22225581292473 0.223698987458893 0.22225581292473 0.234020568679813 0.229157386410949 0.231204037317599 0.222274950345388 0.240641341729726 0.228304882262683 0.228996318761298 0.231144369129323 0.227596270691949 0.228026717920426 0.224420308690902 0.22225581292473 0.233476586666989 0.225244070102438 0.230390234052683 5 5 + 8532749 8533154 8532943.909 8530981 8533870 + gene protein_coding_gene TRUE TRUE AT5G24830.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G12300.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os03g0165100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049065.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.02797190287394 11.3933359449642 2.84128683789290e-07 1.93511130531355e-05 15.2333222382894 9.30181235639302 1.02797190287394 0.0698728558506326 AT5G58540_at 3.28028074286445 3.15020536467038 3.89163444473725 4.22942845532255 4.33375262426838 3.95688816809898 0.986680980071056 0.836391361571474 1.17213737893286 0.607673670349835 1.00917304463051 0.998733146608966 1.42413280877377 1.16669880228112 1.34085567225174 1.33008806988617 1.10625166096193 1.01069221778674 1.14659203364896 0.254727859608601 0.252724992126190 0.265005242592559 0.265706872065488 0.260342179946569 0.251649072129021 0.248713945455278 0.256658330084489 0.260700258504363 0.268899027647069 0.252636680071407 0.251448307495059 0.254522044700599 0.254161786995152 0.255342100657266 0.249165167928435 0.256696084006081 0.256116042250848 0.257621945729003 5 0|5 /|+ 23681845 23682337 23682058.6 23680362 23682542 + gene protein_coding_gene TRUE TRUE AT5G58540.1|AT5G58540.2|AT5G58540.3 protein kinase family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 1.11869839719976 11.3927244075372 2.84278886692747e-07 1.93511130531355e-05 15.2328586750969 4.15755570380465 1.11869839719976 0.0940943555077202 AT5G22740_at 4.89434373339153 5.06651137630549 3.97039261120053 4.06662796507137 4.68618278863152 5.09220522226743 3.9614902553565 3.86758817145383 4.03895092473103 4.62422644936603 6.35008252853115 7.93518911736578 5.61650681684532 6.59788283997735 7.31041338887412 6.6311876571299 6.0170022649014 6.60550195623794 4.87968223122041 0.22028062768997 0.215604284795996 0.215604284795996 0.221488132348125 0.220529496296084 0.215604284795996 0.220790619147114 0.215836336206945 0.22489162910196 0.218134832471097 0.219076951371680 0.225954560628679 0.239302623782206 0.225456366725491 0.220007964157703 0.225157167591316 0.225325560985124 0.219410370567815 0.218924545000911 5 5|0 -|/ 7555411 7556045 7555720 7554931 7560076 - gene protein_coding_gene TRUE TRUE AT5G22740.1 ATCSLA02 (Cellulose synthase-like A2); transferase, transferring glycosyl groups encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G03760.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to glycosyltransferase 10 [Ipomoea trifida] (GB:AAQ62572.1); similar to glycosyltransferase 1 [Ipomoea trifida] (GB:AAQ62570.1); similar to Glycosyl transferase, family 2 [Medicago truncatula] (GB:ABE81491.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) 1.06252652439646 11.3903828507500 2.848548075416e-07 1.93511130531355e-05 15.2310834291121 10.0242964436291 1.06252652439646 0.0797882895877167 AT5G09390_at 6.40202000116302 6.34884611586322 7.09150694476201 7.03489737077181 7.72802650303855 7.37144853640596 5.98299163950965 6.00585297448489 5.67594460285575 5.90593701255675 7.3279077534784 7.12881821187877 6.67890211940704 7.267848733995 6.37059937773686 7.00616606194013 6.74054801211856 6.49855622715396 6.37619380529345 0.189199128419159 0.183481409251778 0.188130348500513 0.189198683793247 0.183481409251778 0.189277422091839 0.193328653256357 0.191186445991025 0.196278055041571 0.194015341448096 0.193232082639918 0.187603991317385 0.188177704643739 0.191958211683147 0.189114013317433 0.183481409251778 0.195769967206437 0.199880412404982 0.195017887183137 5 5|0 +|/ 2914602 2915769 2915246.111 2913535 2915924 + gene protein_coding_gene TRUE TRUE AT5G09390.1|AT5G09390.2 CD2-binding protein-related similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G54230.1); similar to AT5g09390/T5E8_190-related [Medicago truncatula] (GB:ABE93561.1); contains domain FAMILY NOT NAMED (PTHR13138); contains domain SUBFAMILY NOT NAMED (PTHR13138:SF4) 1.00646766398383 11.3896365352798 2.85038635166591e-07 1.93511130531355e-05 15.2305175191617 13.1774204869743 1.00646766398383 0.0632780697349828 AT5G66140_at 8.1987636711874 8.12377649293042 9.1759868797993 9.02238535978788 9.21220604584356 8.84092090660125 8.10138540420495 7.70924747212061 7.82272823919406 7.28152071926948 8.59081299296576 8.5232361002626 8.43311966405315 8.53972659155512 8.7802368888706 8.7228120735982 8.52880956782598 8.55154362608986 6.92730515113074 0.149509259481036 0.143829290414803 0.153472380507498 0.142174857175918 0.148356122744756 0.157422838121968 0.149220915825547 0.147772140863729 0.161973936723398 0.159315084496854 0.142609758978943 0.144011016242816 0.143100868911670 0.152806853087513 0.142383001915029 0.138073799666149 0.146848158429175 0.143551051428274 0.154546949515774 5 5 - 26454769 26455303 26455124.182 26454396 26455990 - gene protein_coding_gene TRUE TRUE AT5G66140.1 PAD2 (20S proteasome alpha subunit D2); peptidase Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. Identical to Proteasome subunit alpha type 7-B (EC 3.4.25.1) (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-2) (Proteasome component 6B) (Proteasome component 6C) (PAD2) [Arabidopsis Thaliana] (GB:O24616); similar to PAD1 (20S proteasome alpha subunit D1), peptidase [Arabidopsis thaliana] (TAIR:AT3G51260.1); similar to proteasome, alpha subunit-like protein [Solanum tuberosum] (GB:ABA40445.1); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353); contains InterPro domain Proteasome alpha-subunit; (InterPro:IPR000426) 1.13475867809253 11.3889921155099 2.85197468295893e-07 1.93511130531355e-05 15.2300288378406 16.5119033080681 1.13475867809253 0.0980231044315979 AT5G40300_at 7.14092246086567 7.02104973685545 8.31526120436905 8.14205584600452 8.26730211913663 7.65345378615875 6.18937676563967 6.6855668711968 5.26451336506002 4.69035056076233 6.10925929399271 6.39491052643533 6.19725775595262 6.41518187763967 5.83576338244578 6.40981739725206 6.37575719908155 6.67327658580253 4.91525608655574 0.21792210142869 0.216905048422044 0.22443277157948 0.222556137687425 0.214160708078825 0.210613405617663 0.215470098168891 0.212473927116174 0.216943779626062 0.216977877209047 0.211196667134172 0.216977459702055 0.212702241670627 0.220664442754348 0.213878389420919 0.214650179201849 0.230192787506871 0.221066483906657 0.222726589078306 5 5 + 16128298 16129891 16129144.273 16127916 16130196 + gene protein_coding_gene TRUE TRUE AT5G40300.1 integral membrane protein, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36330.1); similar to Os01g0661000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043777.1); similar to MtN24 [Medicago truncatula] (GB:CAA75572.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702) 1.33999280590522 11.3858308969138 2.85978023988442e-07 1.93737561618312e-05 15.2276311150234 13.0559284353373 1.33999280590522 0.141374535560720 AT5G23520_at 5.62097864322868 5.85385159703598 7.00098852770298 6.65373646636336 6.93798083035214 6.59098897288689 4.09198192182223 4.62067088533785 4.6158310944992 4.23878300320750 5.3701212384149 5.29914352145057 4.7894140323215 5.7669990782232 4.86929559519803 5.28334418271961 5.51811800597867 5.15390940200267 4.43423698705652 0.221879382532574 0.219456688054953 0.221751226740099 0.229204246178853 0.221555791212828 0.220467324116322 0.230127652295787 0.223713983411731 0.224683515452472 0.221724166493804 0.217041564977805 0.221599993375053 0.218043706773837 0.216388097006488 0.218671319644107 0.217487749763517 0.239849596156688 0.219719492268064 0.220799627405876 5 5 - 7929596 7930311 7929989.727 7929354 7931796 - gene protein_coding_gene TRUE TRUE AT5G23520.1 similar to Os04g0442100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052880.1); similar to P0076O17.10 [Oryza sativa (japonica cultivar-group)] (GB:CAE02512.1); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625) 1.28786452062720 11.3824106415206 2.86825157529712e-07 1.94008319418491e-05 15.2250360130713 10.7643523107378 1.28786452062720 0.131194289010796 AT5G66930_at 6.30664005048051 6.44941290181533 7.64002226298806 7.70906842345396 8.33263961898727 7.32568215460817 6.2650162029476 5.78890809660593 4.63891718717159 4.87271941639668 6.6529001122242 6.51293816697342 6.74705828455289 6.62686523141001 5.87859468575731 6.74036021877815 6.43963295405691 6.53071652327392 4.88072794631151 0.276551827501512 0.275471735289483 0.289245491062091 0.292659055595066 0.284445648169457 0.296520561677717 0.288959926400620 0.285233576251327 0.312823003456016 0.309779553680571 0.277529576739324 0.27687930824217 0.275471735289483 0.275471735289483 0.289774541373639 0.280832702858084 0.292660904086828 0.294303271627951 0.286173221356422 5 5|0 +|/ 26743371 26744310 26743997.25 26743082 26744984 + gene protein_coding_gene TRUE TRUE AT5G66930.1|AT5G66930.2 similar to Os12g0446700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066715.1); similar to hypothetical protein DDBDRAFT_0187874 [Dictyostelium discoideum AX4] (GB:XP_636793.1); contains InterPro domain Protein of unknown function DUF1649; (InterPro:IPR012445) 1.63401861210773 11.3776401186776 2.88011288208299e-07 1.94507173982408e-05 15.2214148310355 12.63396777503 1.63401861210773 0.194699473404443 AT5G13710_at 9.58220159202624 9.70316708858015 10.1534323352333 10.1712946418002 10.9198067637783 10.7739168018871 9.08413475199964 8.97750040821065 10.0908887579007 9.436637393208 10.9464212269731 10.5215077139851 10.3720652894189 10.5710993559951 10.7037057923097 10.2072892361102 9.74627256936413 10.3833075733480 9.62896580423963 0.0840781270902862 0.0826601434223783 0.0837919764069315 0.0815938966966873 0.084800744653647 0.084975808232288 0.0853459267263254 0.0869965339990739 0.0944813240562618 0.0809890140591153 0.0834331510772742 0.083583345471588 0.0842294378296291 0.0875432755828822 0.0806274335686944 0.08392958736764 0.0867484555528095 0.0821173216306512 0.084729014338005 5 5|0 -|/ 4424055 4425031 4424483.1 4423698 4427061 - gene protein_coding_gene TRUE TRUE AT5G13710.1|AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1) SMT1 controls the level of cholesterol in plants Identical to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41) (24-sterol C- methyltransferase 1) (Sterol C-methyltransferase 1) (Protein STEROL METHYLTRANSFERASE 1) (Protein CEPHALOPOD) (SMT1) [Arabidopsis Thaliana] (GB:Q9LM02;GB:Q8LKW1); similar to SMT3 (S-adenosyl-methionine-sterol-C-methyltransferase 3), S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT1G76090.1); similar to S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase (GB:AAB04057.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216); contains InterPro domain Sterol methyltransferase C-terminal; (InterPro:IPR013705) 0.940244809187917 11.3737607499152 2.88979777558352e-07 1.94857722361771e-05 15.2184687511930 19.9958264211749 0.940244809187917 0.0377586390672197 AT5G10540_at 7.23782695683915 7.22476806611152 7.45258798452513 7.59565666588492 8.39306615424042 8.2351761526413 7.44134763892357 7.15444829788474 7.26213598146088 7.2356870706707 8.78800942239291 8.906625886047 8.58696371762453 8.34832412058784 8.56850622980186 8.18488509182849 8.156984640921 8.3820067882149 6.93344446400888 0.197862760388728 0.195377221398049 0.204258091081395 0.195985190485772 0.199170561372409 0.207954935904141 0.205607643009104 0.205101554545037 0.211081531109017 0.200963855839863 0.197996099844805 0.199260434538803 0.199387898625831 0.206017742397958 0.208156300293230 0.195718386612465 0.21104785357655 0.196734780904530 0.204942599907412 5 5|0 +|/ 3331210 3332230 3331719 3328093 3334972 + gene protein_coding_gene TRUE TRUE AT5G10540.1 peptidase M3 family protein / thimet oligopeptidase family protein similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT5G65620.1); similar to Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Medicago truncatula] (GB:ABE84181.1); similar to oligopeptidase A [Nostoc sp. PCC 7120] (GB:NP_484923.1); similar to Peptidase M3A and M3B, thimet/oligopeptidase F [Anabaena variabilis ATCC 29413] (GB:YP_324977.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567); contains InterPro domain Hpt; (InterPro:IPR008207) 1.00052819892351 11.3705220141133 2.89791044983465e-07 1.95101332685552e-05 15.2160082543930 15.4088817775767 1.00052819892351 0.0618848091367269 AT5G27210_at 3.29979361626437 3.79243588983174 4.22857492449531 4.58864594225825 5.57475133387892 5.2832165074793 2.49949271500402 3.20291309336991 3.0016203173958 2.29273163875901 3.87697043620218 4.32607858962191 3.93445351066638 4.03141856819086 4.05201274478553 3.88770664980732 3.61516121387875 3.82393096004642 2.78617272421664 0.233930067923151 0.236103972727411 0.238339327426326 0.237736352812145 0.245297887292375 0.256369532904789 0.239058368113527 0.234629898304393 0.250225538728023 0.234016946239476 0.237307974344098 0.237548682477635 0.235067158270803 0.238123004224021 0.241010369758656 0.237713854139877 0.249111165689186 0.253141886092691 0.240521441401943 5 5|0 -|/ 9572345 9573199 9572742 9572103 9574138 - gene protein_coding_gene TRUE TRUE AT5G27210.1 similar to transmembrane protein, putative [Arabidopsis thaliana] (TAIR:AT3G05010.1); similar to putative expressed protein [Sorghum bicolor] (GB:AAM47585.1); similar to Os03g0756400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051317.1) 1.48504835288494 11.3648583452830 2.91215690359595e-07 1.95544534569548e-05 15.2117034832938 7.37721540829293 1.48504835288494 0.168862723225198 AT5G08170_at 7.44685114190563 7.6485010584785 8.7549181796006 8.85180463281064 8.78016476094751 8.81608250307828 8.25444027551728 8.39398031879238 7.48614522279026 7.28707483674761 8.30877510881829 8.06764371563208 8.41027497278825 8.1991554049163 8.02774228399314 8.59247776903688 8.73978741237811 8.05005053778884 6.9755331769139 0.167602185925053 0.160633246753058 0.160697970887592 0.161323023682407 0.159795172859959 0.164951622123313 0.165459306294014 0.163240797903148 0.174067027353044 0.165252878983268 0.162637474201437 0.156808415208113 0.159897292511561 0.168865783624048 0.161493187021732 0.160452510620099 0.161769216135130 0.165624349954867 0.175266121914207 5 5|0 -|/ 2628666 2629436 2629037.222 2628326 2631096 - gene protein_coding_gene TRUE TRUE AT5G08170.1 EMB1873 (EMBRYO DEFECTIVE 1873); agmatine deiminase Identical to Agmatine deiminase (EC 3.5.3.12) (Agmatine iminohydrolase) (AIH) [Arabidopsis Thaliana] (GB:Q8GWW7;GB:Q94IC7;GB:Q9LEZ0); similar to Os04g0466600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053032.1); similar to OSJNBa0016O02.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE05993.3); similar to agmatine deiminase [Pseudomonas aeru (GB:NP_248983.1); contains InterPro domain Porphyromonas-type peptidyl-arginine deiminase; (InterPro:IPR007466) 0.957351654477102 11.3643205423369 2.91351365335004e-07 1.95544534569548e-05 15.2112945823186 16.1428792653011 0.957351654477102 0.0460504871203488 AT5G20620_at 9.19201348909396 8.94963716216957 10.1332788025531 9.79465720737286 10.3057491151500 9.84672770888506 9.06814302517417 8.86322147559014 8.58315659588258 8.82570869382375 10.1094389407221 9.8635661978962 10.0227549386950 9.76420238732248 10.0216075780518 10.0892493376622 10.0649119377056 9.86351076632137 8.33304678158694 0.136273729168585 0.137586729558459 0.136577431212190 0.145292144786617 0.134407741193969 0.138848951334938 0.134031616251748 0.143903064786542 0.147764385230667 0.134141444405935 0.142908691570211 0.13840666796329 0.136842258795961 0.141114851181555 0.142810720271046 0.138908391351884 0.135855694037525 0.139648334019096 0.132001484523225 5 5 - 6973506 6973842 6973685.545 6973073 6974948 - gene protein_coding_gene TRUE TRUE AT5G20620.1 UBQ4 (ubiquitin 4); protein binding encodes a ubiquitin polyprotein. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ10 (POLYUBIQUITIN 10), protein binding [Arabidopsis thaliana] (TAIR:AT4G05320.4); similar to hexaubiquitin protein [Helianthus annuus] (GB:CAA40324.1); similar to polyubiquitin OUB2 [Olea europaea] (GB:AAL27564.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.19805866196632 11.3616672244689 2.92021741667126e-07 1.95691538920937e-05 15.2092768770863 18.7969498070710 1.19805866196632 0.112964321396541 AT5G63770_at 4.14984288943399 4.12404905579069 5.12751878757227 5.14237392450235 5.17283251466863 4.9343395780414 4.05139067389208 3.96592440426824 3.43007424045367 3.79356221041532 4.93302944321109 4.81446426910308 4.55989827752491 4.51399180592264 4.55901443771501 4.87582742356833 4.60405323655235 3.65533685847119 3.81896559116564 0.207383040158949 0.208017703925729 0.203976759166719 0.206169984298372 0.208502891987866 0.205048556223622 0.207408511374483 0.203216672582037 0.209534577763952 0.210404532274358 0.203876792795894 0.205857000929307 0.206039684734548 0.204350542965589 0.211226546681582 0.203216672582037 0.214300353341022 0.20908917072478 0.206083308244056 5 5|0 +|/ 25538457 25539598 25539245.667 25535867 25540847 + gene protein_coding_gene TRUE TRUE AT5G63770.1|AT5G63770.2 ATDGK2 (DIACYLGLYCEROL KINASE 2); diacylglycerol kinase|ATDGK2 (DIACYLGLYCEROL KINASE 2) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. similar to DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G07920.1); similar to Diacylglycerol kinase accessory re (GB:ABE86193.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21922.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96787.2); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219)|similar to DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G07920.1); similar to Diacylglycerol kinase accessory re (GB:ABE86193.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96787.2); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219) 0.952524533506803 11.3591649362778 2.92655496635062e-07 1.95813586476502e-05 15.207373501626 8.70619363669793 0.952524533506803 0.0441439894111574 AT5G24460_at 10.0373818094723 10.3170449311491 10.6412438629543 10.8670203035043 10.6712364818617 10.6596958922375 9.41969971456883 9.73595165409556 8.64354966072198 8.21537629439276 9.38289626313334 9.27317476138367 9.85862982858092 9.91592758024613 9.10775301651954 9.7195222089307 10.0384858567607 9.66351191237133 8.07368972183508 0.163436257277596 0.167189995283056 0.16688811119388 0.167360007359492 0.169066121835758 0.167669692657419 0.165932339386330 0.162540788174307 0.165368849880763 0.186423130339524 0.17097435566719 0.168255955451350 0.167340931649965 0.165604866443195 0.164533640548649 0.164434747012991 0.167356019781965 0.169097488133271 0.172476097460429 5 5 + 8355132 8355692 8355412 8354702 8355877 + gene protein_coding_gene TRUE TRUE AT5G24460.1 similar to Os06g0712200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058555.1); contains domain no description (G3D.3.90.79.10); contains domain Nudix (SSF55811) 1.07069769699610 11.3548428316063 2.93753682656794e-07 1.96026478466762e-05 15.2040846857736 19.2590891166341 1.07069769699610 0.082874022394974 AT5G39590_at 9.8935390683096 10.2270226907915 11.0591390908241 11.1290673027049 11.2271534412998 11.1743418218900 10.2743441350309 10.2547491058683 9.36120443818867 9.8230103061977 10.6925828693860 10.4493065060396 10.7395036540624 10.6703919824060 10.3432505753555 10.4203050441510 10.9171146651076 10.6639380385283 9.65108196961857 0.104562161064108 0.0993139903402421 0.0993659310891608 0.100478249887859 0.101803520024134 0.101611221537391 0.0993143686424842 0.100958066640452 0.122409484486284 0.110779881773416 0.101992272737396 0.101404936279286 0.105541644927194 0.102370987135233 0.102262839990425 0.101429918164751 0.108116733382411 0.108571984244847 0.106822361164025 5 5|0 +|/ 15870187 15870957 15870475.2 15868620 15871218 + gene protein_coding_gene TRUE TRUE AT5G39590.1 similar to hypothetical protein [Prunus persica] (GB:AAO14626.1); contains InterPro domain TLDc; (InterPro:IPR006571) 0.9926476298621 11.3526129495481 2.94322016147471e-07 1.96026478466762e-05 15.2023873137448 20.7668269511971 0.9926476298621 0.0597663551168871 AT5G22370_at 4.37278793838513 3.91629565940717 5.06555952913608 5.13350575253276 5.16155991579032 5.07581915896437 3.91019560638858 3.9725029032228 3.12105914846592 2.87969681130656 4.02861557910328 4.41523558734722 4.21819659152465 3.96024666170014 4.59799318932432 4.21595430461872 4.11840616412961 4.12644287907107 3.42726690452344 0.233112770928305 0.218687856568905 0.218687856568905 0.222048804410990 0.218892169620262 0.224095419248734 0.219826016425907 0.226693788220446 0.225523276177839 0.218687856568905 0.219496396620432 0.22362761169358 0.218738462256655 0.227554589721878 0.233051493283908 0.219993960351942 0.223128144337183 0.218799280012565 0.223322066192521 5 5|0 +|/ 7407452 7407932 7407707.667 7406100 7408705 + gene protein_coding_gene TRUE TRUE AT5G22370.1 EMB1705 (EMBRYO DEFECTIVE 1705); ATP binding similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.4); similar to Os02g0555000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047120.1); similar to ATP binding domain 1 family, member B [Danio rerio] (GB:AAH83538.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) 1.06681382187935 11.3505640758658 2.94845269976262e-07 1.96026478466762e-05 15.2008273702531 8.25243363682891 1.06681382187935 0.0819474713706503 AT5G64250_at 8.47991719042659 8.54204323775179 9.34736925400288 9.35860004323669 9.45808470373622 9.33904983795977 8.41661218988281 8.3493145693086 8.05290116751073 7.98795062467825 8.86594096684885 8.74617350535754 8.94910783319596 9.09982142758896 8.61622568153327 9.02459661785906 8.79804089641272 8.8621417970796 7.84447503616812 0.134909052069654 0.132441226318111 0.133797781654738 0.128111305989941 0.138585755355723 0.133879235435627 0.127790872324852 0.135649270639587 0.141822505301736 0.142315854768009 0.127927136881316 0.126245640077809 0.134816161178639 0.133258221377772 0.142015180220489 0.125028963716188 0.137532823746057 0.136456498896867 0.142533984888091 5 5|0 -|/ 25714879 25715565 25715307.8 25714580 25716438 - gene protein_coding_gene TRUE TRUE AT5G64250.1|AT5G64250.2 2-nitropropane dioxygenase family / NPD family similar to Os08g0485400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062087.1); similar to 2-nitropropane dioxygenase-related protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD09308.1); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain 2-nitropropane dioxygenase, NPD; (InterPro:IPR004136) 0.918642322086788 11.3492060814259 2.95192640280982e-07 1.96026478466762e-05 15.1997932521671 17.3273897283816 0.918642322086788 0.0260641497263138 AT5G25280_at 10.8697857448163 11.0777096286954 11.9032602836973 11.8694635547251 12.2858297694713 12.0279866727648 10.7315100986491 10.8929174147921 10.3161674564747 10.2655066990518 11.0909122092838 10.8932524166597 11.5838630349722 11.2025925226811 10.7449163309822 11.7084264069857 11.6760364553575 11.1380770381978 10.5375732910048 0.094781594782404 0.0931560275490741 0.098161327074333 0.0934243192394304 0.0966228655144719 0.0970300994052117 0.0978066119941262 0.0965648106817896 0.108557347774781 0.101235197299230 0.0954590046942961 0.0926600410585225 0.0935934636960944 0.0954431403452144 0.0986914890801643 0.0926600410585225 0.0985357147253105 0.096318334006971 0.099968104405868 5 5 + 8773972 8774496 8774209.455 8773792 8776003 + gene protein_coding_gene TRUE TRUE AT5G25280.1|AT5G25280.2 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G11090.1); similar to hypothetical protein MtrDRAFT_AC152347g10v1 [Medicago truncatula] (GB:ABE87377.1) 1.00516570906963 11.3485470835448 2.95361370039073e-07 1.96026478466762e-05 15.1992913690202 22.271228912985 1.00516570906963 0.0640325511886434 AT5G40450_at 9.79997715220198 9.8445400778727 10.7779118496819 10.7722345922243 11.3841073061443 11.0662983845294 9.2130545425726 8.75842222122469 10.5474328073708 10.3139591454315 11.7876796996003 10.9746920607147 11.0308616261415 11.3132505900017 10.9225846554009 11.0359795315238 10.5641234289737 11.3099072798735 10.5392596726693 0.098505414860762 0.0972390980678887 0.097469537813709 0.100341824058097 0.101272084228275 0.104442280007189 0.0984688456487799 0.108818149109625 0.111043491279389 0.0984813123083935 0.101258782180248 0.0982964165134907 0.101105746638918 0.0961461002572533 0.094530897688602 0.0984161111853367 0.0951085528013514 0.100503644854305 0.094530897688602 5 5|0 -|/ 16202034 16202633 16202276.8 16201878 16212849 - gene protein_coding_gene TRUE TRUE AT5G40450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to erythrocyte membrane-associated (GB:AAF15293.3) 1.12332025927427 11.3464318117312 2.95903673054019e-07 1.96026478466762e-05 15.1976801719147 20.9942026328995 1.12332025927427 0.096307858076691 AT5G18060_at 5.0179218674115 5.12886182754438 4.77569798414128 5.09461321276913 6.51093409990871 6.11917870967258 4.95423083992238 5.27517512546605 8.13244571190208 5.99948818921336 9.54250981960595 9.84671822824637 9.852720308805 8.83452123815539 10.1840905822566 9.26032909574157 7.78760460597866 8.59064691681333 8.2014760112189 0.462297183490367 0.462297183490367 0.477324079559349 0.47197337278608 0.462297183490367 0.462297183490367 0.462297183490367 0.466406680268115 0.462297183490367 0.462297183490367 0.462297183490367 0.468435100382382 0.467716878446406 0.469023815407146 0.475212984871571 0.462297183490367 0.473006951207630 0.462297183490367 0.462297183490367 5 5 + 5976060 5976280 5976160.4 5975956 5976498 + gene protein_coding_gene TRUE TRUE AT5G18060.1 auxin-responsive protein, putative similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G18050.1); similar to SAUR [Raphanus sativus] (GB:BAA25434.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 1.16199060760455 11.3455171065336 2.96138515962647e-07 1.96026478466762e-05 15.1969833313505 13.7005079934687 1.16199060760455 0.105335023025287 AT5G35730_at 6.40712439427536 6.68007323857756 7.60941740173837 7.32840596809582 8.0013097001232 7.47650062982398 6.97032976446985 6.5987233369113 5.42213912113028 5.35906902318395 7.0826387987353 7.31541584680435 6.75753753320224 7.2060039983376 6.95080198247797 7.18503065153482 6.78695606159573 7.02311400894001 5.48237814827036 0.246441508719771 0.249080581106055 0.241860585422709 0.241860585422709 0.249333715385399 0.250140523918878 0.241860585422709 0.247869599012202 0.257503619549941 0.245407679194024 0.24363444476509 0.243930249179604 0.253044832825886 0.244202762244143 0.251941374829092 0.241860585422709 0.269336384395794 0.251068608098782 0.252009161668756 5 5|0 +|/ 13913203 13914018 13913494.4 13910937 13914204 + gene protein_coding_gene TRUE TRUE AT5G35730.1 EXS family protein / ERD1/XPR1/SYG1 family protein similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT2G32295.1); similar to EXS, C-terminal [Medicago truncatula] (GB:ABD28452.1); similar to EXS family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99182.2); similar to Os12g0595000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067180.1); contains InterPro domain EXS, C-terminal; (InterPro:IPR004342) 1.2785438353644 11.3389308236156 2.97835484960384e-07 1.96849240081313e-05 15.1919637737134 13.3638019497844 1.2785438353644 0.130307334422215 AT5G18390_at 4.92679584671016 5.57759874714448 5.89224536884022 6.37842039340004 6.81359766051275 6.7478860803125 5.15784249771196 5.22522841068277 4.64432240913458 4.79706492688361 5.84948381788021 5.58234366753239 5.93757503119549 6.28534702935383 6.30223975544152 6.45798847930769 6.36624506532679 6.19582492076076 4.62412874747132 0.251821599418818 0.242760697045329 0.255935970175281 0.242760697045329 0.250647764258191 0.253509576189663 0.243933404303005 0.247187241870057 0.259760555584766 0.259283256348142 0.256178537811063 0.245189261073400 0.245650505965898 0.244067710085520 0.257791210947228 0.246017491330494 0.251066121395007 0.242760697045329 0.252203412992435 5 5 + 6091747 6092215 6092028.091 6090956 6092547 + gene protein_coding_gene TRUE TRUE AT5G18390.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G65820.1); similar to Os03g0597200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050605.1); similar to OJ991113_30.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE02059.2); similar to Os08g0525500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062291.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.33489830494535 11.3361261056399 2.9856133405956e-07 1.97028629036662e-05 15.1898251686801 11.2452700416709 1.33489830494535 0.141521205269577 AT5G41340_at 8.85715503142995 9.06878803429635 9.6575197001657 9.86030389333618 10.2326724665073 9.9303026537126 9.33021212319236 9.23039407830081 8.4885921923623 8.5209808168494 9.85754093324855 9.60704067037083 9.87128652426173 9.84500454996761 9.77784214613704 10.0315755446463 9.79755806746711 9.94238800726116 8.67368034409802 0.0957102034468412 0.0924208560402973 0.0944054851857597 0.0937653373410253 0.097166995234269 0.0950846963788825 0.0925105268221886 0.0951324165845828 0.102514913911924 0.101827448815577 0.0920790460680225 0.0949792652983458 0.0935144683769567 0.0969560119159 0.0951817861764706 0.0935711849615351 0.098962375429961 0.0944403592160882 0.0968743955105903 5 5|0 -|/ 16556105 16557160 16556467.714 16555309 16557358 - gene protein_coding_gene TRUE TRUE AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. Identical to Ubiquitin-conjugating enzyme E2-21 kDa 1 (EC 6.3.2.19) (Ubiquitin- protein ligase 4) (Ubiquitin carrier protein 4) (UBC4) [Arabidopsis Thaliana] (GB:P42748;GB:Q9FN66); similar to UBC5 (ubiquitin-conjugating enzyme 37), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G63800.1); similar to ubiquitin conjugating enzyme (GB:AAA32900.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 1.03937873297119 11.3300767022041 3.00133451695909e-07 1.97765099287057e-05 15.1852103150572 18.7221005008793 1.03937873297119 0.0748951120872507 AT5G09990_at 4.22616813488766 4.69726558933476 6.82573585554019 6.9357624935685 6.94825243338169 6.21329021309018 6.63535855455496 6.30741320151767 4.99970460003294 6.08446157444005 7.31309243043175 7.00662018385541 6.71628088583582 7.30826616364275 5.61639950660442 7.5530418006301 7.74059674191089 6.93138678095527 5.10722330656354 0.251927682947186 0.2455078296708 0.246065267788732 0.251494801368270 0.247803693649099 0.255157827357743 0.242337770384836 0.246276756403105 0.252723187095256 0.246166399553882 0.248147983209661 0.241301824652302 0.243223872618406 0.243483575819792 0.244609723354772 0.241301824652302 0.246531917491941 0.246505286736377 0.243884561752356 5 5 + 3124649 3124949 3124778.091 3124569 3125075 + gene protein_coding_gene TRUE TRUE AT5G09990.1 PROPEP5 (Elicitor peptide 5 precursor) Identical to Elicitor peptide 5 precursor (PEP5) [Arabidopsis Thaliana] (GB:Q8LD63;GB:Q9FIA8) 1.44514480677126 11.32694781859 3.00950115598257e-07 1.98002303281833e-05 15.1828222493970 12.3088260038572 1.44514480677126 0.162501581432326 AT5G04930_at 10.5236438055036 10.4108818407363 11.1263065769913 11.2628779225854 10.3034110455890 10.3716530638989 8.16162570152069 8.41041239801861 9.4634649599979 8.59935435849458 9.5241810610235 9.61701648696626 9.44285473265475 9.39179496339796 9.28955526822754 9.65551668312898 9.15602418607602 9.81527720445032 8.7207268214371 0.100399247287880 0.101659560124263 0.118838995981052 0.105040632847161 0.104258826656071 0.106559689177515 0.108532926633373 0.109951095582256 0.113891400138768 0.109893870671333 0.100837006338462 0.100669892254631 0.100913319496992 0.111821575505224 0.107939350822308 0.104409924311184 0.110345999942489 0.106491698422127 0.112474234369424 5 5|0 +|/ 1448977 1449539 1449275.2 1444871 1449818 + gene protein_coding_gene TRUE TRUE AT5G04930.1 ALA1 (AMINOPHOSPHOLIPID ATPASE1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. Identical to Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1) (ALA1) [Arabidopsis Thaliana] (GB:P98204); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G59820.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G13900.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G27870.1); similar to phospholipid-translocating P-type ATPase, flippase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95802.1); similar to hypothetical protein DDBDRAFT_0190219 [Dictyostelium discoideum AX4] (GB:XP_645920.1); similar to phospholipid-transporting atpase 1 (aminophospholipid flippase 1) [Aedes aegypti] (GB:EAT48161.1); contains InterPro domain Phospholipid-translocating P-type ATPase, flippase; (InterPro:IPR006539); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Haloacid dehalogenase-like hydrolase, type 3; (InterPro:IPR013200) 0.974050037876072 11.3203535728939 3.02679191304490e-07 1.98838176556695e-05 15.1777867094259 19.2785396876307 0.974050037876072 0.0541522267297325 AT5G58030_at 7.73521070327121 7.5837531016291 8.1904811392334 8.48504586712826 8.74033266318085 8.40364779558245 8.00157763965843 7.67558128809455 6.83064872418468 6.69722564176558 8.11765191941201 8.39768725249171 7.64626077854167 8.18045943696476 8.33117967315954 7.97267312291063 8.04538140834884 8.06102577893414 6.07352599091488 0.171764752470231 0.163203373694953 0.171262929950468 0.166453680669405 0.166441518626975 0.164552971407651 0.164058172116137 0.168684546132026 0.184253184366274 0.169967428723295 0.164799297754218 0.169026698727009 0.164666553698673 0.172458183197694 0.174301838354656 0.168298992209138 0.171213856494274 0.169768935841247 0.183291776290978 5 5|0 -|/ 23504388 23505666 23504937.8 23504003 23505846 - gene protein_coding_gene TRUE TRUE AT5G58030.1 transport protein particle (TRAPP) component Bet3 family protein similar to SPP30 [Solanum chacoense] (GB:AAD34459.1); similar to Os01g0708600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044028.1); contains InterPro domain Transport protein particle (TRAPP) component, Bet3; (InterPro:IPR007194) 1.13304299275414 11.3170735810183 3.03543257799846e-07 1.99104132363506e-05 15.1752807083536 15.4158737948725 1.13304299275414 0.0993125879896975 AT5G46550_at 3.97187650313652 4.4874077392413 5.4569676809022 5.57494675585859 5.57490271181972 5.31215992272432 4.08558386757244 4.27104456516206 3.78851307474810 4.29984828340426 5.24011579121887 5.47072511562893 5.10421874041982 4.70694598189061 4.90215103061915 5.63963732538331 5.96236723720099 4.49483518415815 4.31227095669138 0.225206877268464 0.215983994901922 0.220079298212283 0.215334043822847 0.216954606223819 0.216531865693067 0.216095994233834 0.211913115830885 0.225777027516408 0.216006055050140 0.215300316369737 0.211703008122498 0.211703008122498 0.216553182741029 0.224434175997578 0.215396241454471 0.22306718221434 0.221889127173964 0.218857099368995 5 5|0 -|/ 18901773 18902604 18902167.1 18901536 18904166 - gene protein_coding_gene TRUE TRUE AT5G46550.1 DNA-binding bromodomain-containing protein similar to ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9), DNA binding [Arabidopsis thaliana] (TAIR:AT5G14270.1); similar to Bromodomain [Medicago truncatula] (GB:ABE92903.1); similar to Os07g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059741.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 1.16617327245760 11.3095394543149 3.05538188970759e-07 2.00109935981624e-05 15.1695211301632 9.50369554618359 1.16617327245760 0.107115239887966 AT5G23250_at 6.34908757592739 6.71861991520407 7.63615590752324 7.73061088751833 7.3278262735231 7.41881839024378 7.27192143489878 7.01914572699299 5.64153291960589 6.31371041927929 7.17614129116865 7.86915713961074 7.47654199481212 7.25687289337094 7.87687713154359 7.55764876014535 7.22554237958927 6.95546394399899 6.0471961434327 0.200946609359507 0.192611419892271 0.200601349641152 0.202517617524091 0.205267566495665 0.190987208671693 0.209277899466858 0.195005060410445 0.222501566124199 0.210309395073294 0.193180161532667 0.190987208671693 0.193931656300070 0.205704658066523 0.200615516058222 0.190987208671693 0.202324593429827 0.210713339645964 0.224456316874559 5 0|5 /|+ 7831300 7832449 7831929.4 7830363 7832846 + gene protein_coding_gene TRUE TRUE AT5G23250.1 succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative Identical to Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha-2) (SCS- alpha-2) [Arabidopsis Thaliana] (GB:Q8LAD2;GB:O82661;GB:P53586;GB:Q9FMX5); similar to succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] (TAIR:AT5G08300.1); similar to succinyl-CoA ligase alpha 2 subunit [Lycopersicon esculentum] (GB:AAT67464.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain CoA-binding; (InterPro:IPR003781); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) 1.05606336622682 11.2838957095872 3.12435867320695e-07 2.04149457704459e-05 15.1498828113776 13.8965701902553 1.05606336622682 0.0807353362192335 AT5G13540_at 6.40850332248614 6.09563619087473 7.33254674246194 7.2571433255458 7.45680341340669 7.0329422239481 5.91800544568071 5.51889137198317 5.94394847532999 6.02040688642313 6.9342540659229 7.08471686718172 7.06011012120375 7.28984679530796 6.88534777591149 7.2635726912827 7.35012609502516 7.01042514776361 6.02077006380402 0.167728630202097 0.174300924125661 0.171956528744508 0.170018133491131 0.173878567058757 0.179215616546384 0.170886048880649 0.174612489472025 0.173678097378220 0.172888327049360 0.167572063985954 0.170975619678985 0.172870226896518 0.180087009443378 0.169129087658127 0.167572063985954 0.169868889345805 0.167572063985954 0.172110292702103 5 5 + 4353806 4354321 4354021.909 4351396 4354684 + gene protein_coding_gene TRUE TRUE AT5G13540.1|AT5G13540.2 Stone et al. (Plant Cell, 2007, PubMed ID 17194765) suggested that this locus is misannotated, with a full open reading frame ORF likely encompassing both the At5g13530 and At5g13540 loci. The misannotation will be corrected with the next Arabidopsis genome release (TAIR8). At5g13530 and At5g13540 together encode KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. Please see AT5G13530 for annotation details. similar to Ankyrin [Medicago truncatula] (GB:ABE94419.1)|similar to kinase [Arabidopsis thaliana] (TAIR:AT4G32250.3); similar to putative protein-related [Medicago truncatula] (GB:ABE84393.1); similar to Ankyrin [Medicago truncatula] (GB:ABE94419.1); contains domain SERINE/THREONINE PROTEIN KINASE (PTHR22967); contains domain PROTEIN KINASE (PTHR22967:SF2) 1.19967899000765 11.2831181299842 3.12647649226591e-07 2.04149457704459e-05 15.1492864947063 13.1799798812829 1.19967899000765 0.115119972456251 AT5G41800_at 4.37403778658168 4.44341969726936 4.50079917831240 4.66946332785484 6.05901865179262 6.31305299979602 3.55037812657484 3.99565558898097 4.27978319467936 4.47950878909134 5.99788109152562 5.19639635997797 5.01951250644855 5.78680888910389 5.2472223625455 4.71033124431148 5.2552746864637 4.99650323961115 4.31160790867134 0.219061304384699 0.220198518590705 0.216123129868004 0.224874779277628 0.237591684020112 0.246689786107376 0.224676736603189 0.229582782490166 0.225324995967309 0.229461025619674 0.224685451786593 0.217246855468699 0.219382711710273 0.218313392217442 0.225351935336961 0.216127104484053 0.237113077747743 0.224534732654803 0.219536598940324 5 5|0 +|/ 16752471 16753039 16752804.8 16751001 16753219 + gene protein_coding_gene TRUE TRUE AT5G41800.1 amino acid transporter family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08230.2); similar to Os05g0586500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056462.1); similar to Os01g0621200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043602.1); similar to hypothetical protein [Cicer arietinum] (GB:CAA06244.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.10699270313586 11.2706781703347 3.16057113186665e-07 2.05807329144170e-05 15.1397397340815 9.5548321338016 1.10699270313586 0.0941625575756082 AT5G52110_at 4.91655632335774 5.27814871142399 6.2198921446376 6.14018588140055 6.90315778958235 6.2561080159068 5.66028345742546 4.82983116188526 4.06952394322805 4.40848879972239 6.03681474141775 6.25688742413515 6.11151702125098 6.23901107655532 6.42699677955148 6.21076897377903 6.30297732530259 6.00090763601588 4.08532869973327 0.266441951757516 0.256620746555522 0.254323055041796 0.259011461137558 0.263665557731470 0.256055726005502 0.254499216762474 0.264270852813779 0.259237318751209 0.260937977569789 0.251725899457361 0.259864258414588 0.251150170562830 0.259385221421772 0.25768073083907 0.256179459214806 0.261191886354970 0.258773755924279 0.255427200526923 5 5|0 -|/ 21189934 21190827 21190290 21188860 21191231 - gene protein_coding_gene TRUE TRUE AT5G52110.1|AT5G52110.2 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47906.2) 1.60954284285758 11.2703921498319 3.16135977789443e-07 2.05807329144170e-05 15.1395200857914 10.9685282372753 1.60954284285758 0.193126722857166 AT5G63200_at 6.38509629365225 6.0360782617382 7.33951899695162 7.21594772477865 7.47725424755509 7.2190796754646 6.0223471116956 5.54435916165797 5.23173761122288 5.20384091022647 6.3550182219284 6.40409420223193 6.45652295712066 6.34428296865376 6.04157206086445 6.41876487046969 6.68586272200151 6.35638751584436 5.51033904457308 0.164432053528217 0.163403166069338 0.162996419180509 0.165580575175783 0.169645614879659 0.175071886270634 0.160188607856812 0.163575110050286 0.169132704376114 0.170817311576320 0.161822305995757 0.162682099330118 0.163134688418024 0.167609380846315 0.161391053076432 0.16077526624009 0.165426509106978 0.165609296207012 0.165802975768870 5 5|0 +|/ 25367691 25370092 25368942.895 25366237 25370265 + gene protein_coding_gene TRUE TRUE AT5G63200.1 tetratricopeptide repeat (TPR)-containing protein similar to SEC (SECRET AGENT), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G04240.1); similar to P0497A05.3 [Oryza sativa (japonica cultivar-group)] (GB:BAB92560.1); similar to Os01g0906600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045134.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.19174364427501 11.2668118647838 3.17124984370777e-07 2.06141659201172e-05 15.1367700554284 12.5040197068018 1.19174364427501 0.113770778935162 AT5G11740_at 11.4620905057110 11.7680290960016 12.7011860444599 12.8139397820633 12.4057983942372 12.4344203453605 11.6441119060682 11.9919025091705 12.301779668532 11.7019752434741 13.8383035162052 13.2775773929443 13.2633687154533 13.3545114655841 13.2888097470005 12.8323644788783 12.4030197527968 13.1257215294323 11.7644888968641 0.0676139316104562 0.0645241067696496 0.0674618782144321 0.0636452737715424 0.0658226166171824 0.0649811223636222 0.0649092119400009 0.0679740818702327 0.0746063552314128 0.0685521795930675 0.0686473404269163 0.0636452737715424 0.0636452737715424 0.06773026927394 0.0699941534481368 0.0644551173273 0.076385825037602 0.0655634073363793 0.0642257923212669 5 5 + 3784320 3784448 3784390.545 3784252 3784793 + gene protein_coding_gene TRUE TRUE AT5G11740.1 AGP15 (ARABINOGALACTAN PROTEIN 15) Encodes arabinogalactan protein (AGP15). Identical to Arabinogalactan peptide 15 precursor (AG-peptide 15) (AGP15) [Arabidopsis Thaliana] (GB:Q9LYF6); similar to fiber protein Fb7 [Gossypium barbadense] (GB:AAN77148.1) 1.06125713789460 11.2636606386153 3.17998253207833e-07 2.06399867558311e-05 15.1343487208386 24.7005385784225 1.06125713789460 0.0826486583587628 AT5G02370_at 1.30023206532251 1.07830314948479 1.89245832895818 1.71987073801805 2.02725306272031 2.17351051924711 1.00745653137528 0.699653832869169 0.920104655711841 1.18629697533456 1.77640436049812 2.40488308003474 2.03242958706152 2.20336366348429 2.32786471239915 2.48949157720221 2.18340609253849 2.48691845211516 1.17548412711512 0.210629416153490 0.205631297868086 0.213817455264051 0.209003999087184 0.209847828737917 0.211398122056349 0.213280217072631 0.211103605055158 0.217279667195616 0.217671880493195 0.205631297868086 0.209561344564969 0.212826605177995 0.206532073369158 0.205631297868086 0.213702553949073 0.223309876203808 0.210569130790833 0.213067260247994 5 0|5 /|+ 505230 506360 505738 503406 507242 + gene protein_coding_gene TRUE TRUE AT5G02370.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G49650.1); similar to Kinesin, motor re (GB:ABE78033.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain DNA polymerase beta, N-terminal-like; (InterPro:IPR010996) 1.03799751937626 11.2555805361683 3.20249385142062e-07 2.07323185875071e-05 15.1281364363434 3.15337083352636 1.03799751937626 0.0764526958837444 AT5G65760_at 8.18620562509771 8.17272181923105 9.11912263752819 9.03877567887071 9.45380956871125 9.09711997021016 8.16711003292374 7.90139361400882 7.51919951577282 7.62655269384562 8.72970137321402 8.51365496677248 8.69159376446592 8.56850596354673 8.64682323900651 8.76246262328857 8.76557160751826 8.61969684703208 7.78589522873898 0.127310766258943 0.131713646374985 0.129952003448889 0.129413749962338 0.132182572531097 0.132610726722169 0.129146914902399 0.138847910218465 0.151034544909029 0.142464749420843 0.129735657328897 0.129025251033008 0.127310766258943 0.127310766258943 0.133134120811621 0.127310766258943 0.135935695642951 0.132661798286371 0.133920427202706 5 5|0 +|/ 26327049 26327998 26327553.25 26325479 26328251 + gene protein_coding_gene TRUE TRUE AT5G65760.1 serine carboxypeptidase S28 family protein similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT2G24280.1); similar to Os01g0767100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044360.1); similar to PREDICTED: hypothetical protein [Gallus gallus] (GB:XP_425654.2); similar to Os06g0647400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058206.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S28; (InterPro:IPR008758) 1.04435900483392 11.2551237954176 3.20377150392519e-07 2.07323185875071e-05 15.1277851176397 16.7950992571017 1.04435900483392 0.0782525045372432 AT5G47050_at 5.8919868479697 6.0352481046055 8.23793401101642 8.32236046802355 8.1225902539398 8.20372245120001 7.46417760137013 7.76754654508008 6.45668385765343 7.23305211926394 7.60822549738487 7.07726887307773 7.51414738315037 7.35185399151192 6.33040037006906 8.1318563405977 8.01086395306082 8.14579637574118 7.23665141869967 0.173260419716387 0.167072057179220 0.164058861413561 0.163014268910205 0.163014268910205 0.165089694507145 0.169036085779198 0.164974559921526 0.171080338391674 0.166107088591354 0.164864319287762 0.166574469745445 0.16604635560357 0.172850922653884 0.164651043220304 0.163014268910205 0.178132026495531 0.170914901902465 0.167804653200589 5 5 + 19124678 19125035 19124876.636 19123567 19125575 + gene protein_coding_gene TRUE TRUE AT5G47050.1 ATP binding / protein binding / shikimate kinase/ zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G17680.1); similar to hypothetical protein 40.t00029 [Brassica oleracea] (GB:ABD65150.1); contains InterPro domain Shikimate kinase; (InterPro:IPR000623); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.988875577078558 11.2513709760516 3.21429037164218e-07 2.07693894333828e-05 15.1248978545915 14.7540778170406 0.988875577078558 0.0614933046609426 AT5G27620_at 3.26127654423192 3.18668232949679 4.49191358105608 4.75752451776505 4.44871862863765 4.5288395997782 3.79459213728924 3.6446389545638 3.56816312188004 3.3804588946183 4.03232508506558 4.26066089791088 4.1201141025131 4.05119615190844 3.96388269263815 4.28308997799374 4.62452717693208 4.23124079761751 3.05845452678966 0.190320004857305 0.190902744439976 0.194063238821889 0.193928140397391 0.193740886443644 0.209665869732040 0.195455433164498 0.200937536259979 0.2025802050863 0.198687910162995 0.204340535818940 0.190320004857305 0.199993157325541 0.190320004857305 0.190535247246937 0.19335767836834 0.210233181608270 0.193846258234256 0.196504887588871 5 0|5 /|+ 9773059 9774649 9774100.125 9771329 9774878 + gene protein_coding_gene TRUE TRUE AT5G27620.1 CYCH;1 (CYCLIN H;1); cyclin-dependent protein kinase/ protein binding / protein kinase core cell cycle genes similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48640.1); similar to CAK associated cyclinH homolog [Populus tremula x Populus tremuloides] (GB:AAD02871.1); contains InterPro domain Transcription factor TFIIB, cyclin-related; (InterPro:IPR013150); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.972569509820122 11.2422812943166 3.23992402208013e-07 2.09038699684862e-05 15.1178998554191 7.78005918231155 0.972569509820122 0.0560811383540631 AT5G37890_at 4.85422159050298 4.51426457957092 5.41342354458001 5.45649303989395 6.30976398473389 5.85722343029939 4.61455496739635 4.74038471517857 4.26037780575102 3.35045317728586 4.54327890692477 4.77157561003568 4.99289144178105 5.09665009030053 5.22560938629102 4.98020603431615 4.73743075093525 5.10599650156188 3.63427081087309 0.232230911686364 0.230860785859602 0.233649068688144 0.234715206958391 0.239001212449803 0.2355678881369 0.227795888180007 0.229355335255125 0.230093415258848 0.232166791665419 0.233477461800271 0.234188745226953 0.233271301054313 0.232340261772235 0.231921879761302 0.227795888180007 0.229418779986924 0.235340108704785 0.24174833040651 5 5 - 15107892 15108310 15108099.818 15107516 15109124 - gene protein_coding_gene TRUE TRUE AT5G37890.1 seven in absentia (SINA) protein, putative similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G37910.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.13085355617312 11.2400280607751 3.24631264976563e-07 2.09139671830679e-05 15.1161640808714 9.56007728397198 1.13085355617312 0.100617831521934 AT5G62860_at 2.61650000720805 2.63816818487908 3.23483388007028 2.97088515480343 3.39942979773826 3.33810998244269 1.87364470469161 1.46417856316588 2.49157648257339 1.87350161885447 3.62584267208032 2.90768743174379 3.19907808662177 3.34889888412671 3.13407319193435 2.71269124870663 2.25032156876776 3.05754083357506 1.58526935521082 0.21908770320919 0.222930945252706 0.217651156121029 0.217651156121029 0.228380424886624 0.231743832062452 0.231395639908318 0.234516384411801 0.220866009066779 0.236096914486974 0.227014069539635 0.230503059550866 0.221964344863938 0.222817109720674 0.224610084682195 0.218991735016689 0.222893582172967 0.217651156121029 0.223493035074278 5 0|5 /|+ 25251312 25251754 25251486.667 25249858 25251793 + gene protein_coding_gene TRUE TRUE AT5G62860.1 F-box family protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48020.1); similar to IS10 transposase, putative [Lycopersicon esculentum] (GB:ABI34274.1); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 1.06687971312958 11.2272988104468 3.28266233026263e-07 2.11167684272097e-05 15.1063503082622 5.19845173032863 1.06687971312958 0.0850544008423884 AT5G63860_at 8.23614597888885 8.40407097720372 8.54927088501408 8.69965949834695 9.123678638107 8.84916086612193 7.90971122813557 8.28999207983492 7.21188238789846 8.09290441474309 9.61466403240413 9.60612688960574 9.55724131608394 9.58937547867175 9.36308748686805 9.40874839474662 9.04004016324158 8.92472512947178 8.12920564381223 0.132391944562067 0.129122370102599 0.131627291070912 0.128949178232128 0.132408325373517 0.143767083612747 0.135054567152687 0.140477182456059 0.186521118603486 0.132277976302438 0.132406555637594 0.128075853647612 0.132849045694259 0.132474205269949 0.140311176287691 0.132482010874656 0.133316534429127 0.138233454929433 0.129888670650960 5 5|0 -|/ 25572352 25573614 25572866 25571734 25575978 - gene protein_coding_gene TRUE TRUE AT5G63860.1 UVR8 (UVB-RESISTANCE 8) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to Os04g0435700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052849.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABE79269.1); similar to Os02g0554100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047115.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 1.08606635089192 11.2253782312432 3.28818506037691e-07 2.11209584098401e-05 15.1048684599806 17.1073772323923 1.08606635089192 0.0900531432208234 AT5G58375_at 8.44231335671862 8.93685382176418 9.6263147953025 9.56339805657412 9.98512340214437 9.7649849298603 7.89131923352433 8.19673136906599 8.17383377885139 8.20654000644466 9.34054085552739 9.3659289571856 9.36772359595031 9.24583268780061 8.75459244612858 9.3051049194794 9.03826220119531 9.19557342343094 8.36098663794193 0.176614659190972 0.178382594464148 0.179687682813303 0.173287991321281 0.177776793236582 0.185268594837349 0.174056172467669 0.174036863511839 0.187597544761236 0.176976905233299 0.168901779332011 0.170380378391666 0.168083426483113 0.168575669999904 0.181884872047866 0.168083426483113 0.194549320500818 0.174016204657449 0.180718058758016 5 5|0 +|/ 23613595 23613906 23613740.5 23613498 23614186 + gene protein_coding_gene TRUE TRUE AT5G58375.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18150.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96267.1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133:SF1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133) 1.16136279772999 11.2202842479971 3.30288208054643e-07 2.11839779266295e-05 15.1009366629773 17.7752873840776 1.16136279772999 0.108109494692649 AT5G25540_at 8.94548989868712 9.02373966907231 9.95212506863694 9.7258148056477 9.86664500586608 9.61635192685836 8.34913663482446 8.57930672408547 8.55478140064206 8.28512785399233 9.67423911466493 9.49689327627287 9.44583810357864 9.49640535603993 9.18875319252416 9.34493258306499 9.28737008948196 9.57531608583321 8.5592357531949 0.121788577558925 0.121788577558925 0.130598372582430 0.12556548702673 0.124414397535154 0.130496454435215 0.126952628595234 0.121788577558925 0.132943149196911 0.131739236707940 0.124595975689772 0.125447669404931 0.12656727505876 0.126972964237859 0.13041976979402 0.124398973662091 0.129528773994212 0.130374102348050 0.128509352753839 5 5 - 8891780 8892322 8892056.455 8891528 8892993 - gene protein_coding_gene TRUE TRUE AT5G25540.1 CID6 (CTC-Interacting Domain 6); protein binding Expressed protein contains PAM2 PABC interacting domain. similar to CID5/IPD1 (INCREASED POLYPLOIDY LEVEL IN DARKNESS 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G11440.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin system component Cue; (InterPro:IPR003892) 1.01907638799554 11.2174701288467 3.31103191644326e-07 2.12048810604844e-05 15.0987636678017 18.2098762889393 1.01907638799554 0.071971655237451 AT5G66290_at 5.45986530529796 5.41933938072155 6.11862289699143 6.2627912808765 6.83809456033542 6.68351861639594 5.25996329636577 5.0833845125556 5.93903705493368 5.27576558201678 6.49463302146959 6.35466689195071 6.29448444891933 6.48510264592886 5.90842399522984 5.97947491124996 6.17195896760758 6.40318115395337 5.38166296534764 0.219598408828749 0.215331679073536 0.214082937849890 0.210472834573474 0.206353925248878 0.213038762891878 0.205089441163638 0.209240171596501 0.211382184130442 0.212788401278627 0.205089441163638 0.205089441163638 0.214281847913206 0.208659037971830 0.207654441276685 0.210161751450497 0.216367891185853 0.205089441163638 0.215290589430964 5 0|5 /|- 26495147 26496332 26495703.889 26494887 26496667 - gene protein_coding_gene TRUE TRUE AT5G66290.1 similar to hypothetical protein [Thellun (GB:ABB45846.1) 0.949727134343615 11.2141337442195 3.32072260071773e-07 2.12091690522943e-05 15.0961865485969 11.7875204588449 0.949727134343615 0.0481765855109014 AT5G06830_at 5.01603706648201 5.34592633498441 5.94105514343555 5.999078478644 6.18662086165973 6.02458718405468 5.00652806767278 5.33629232056488 3.96772693238499 4.08607665997062 5.56838899190525 5.94146800398403 5.58009581904861 5.36267997441348 5.18739119348093 5.58566481665903 5.14210421286083 5.35808329250185 4.51295857705119 0.247328660895971 0.232829383489989 0.232829383489989 0.237153575352332 0.242178134999547 0.248406832593805 0.241231457560445 0.243045731157963 0.249667201082616 0.243281868468286 0.25638641042608 0.238175984013694 0.234260857278411 0.242633365353448 0.234310450862441 0.237850853146281 0.243132980162999 0.235550427923539 0.238319443491225 5 5 - 2117138 2117815 2117470 2116784 2119630 - gene protein_coding_gene TRUE TRUE AT5G06830.1 Identical to CDK5RAP3-like protein [Arabidopsis Thaliana] (GB:Q9FG23); similar to Os06g0320100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057510.1); similar to CDK5 regulatory subunit associated protein 3 [Mus musculus] (GB:NP_084524.1); contains InterPro domain Protein of unknown function DUF773; (InterPro:IPR008491) 1.06922664224681 11.2124791674537 3.32553983122704e-07 2.12091690522943e-05 15.0949081666024 10.4343433128084 1.06922664224681 0.0860401983140367 AT5G48340_at 6.80221637397894 7.08624867944382 8.00426786102992 8.25760502485521 8.50587342651078 8.05067559226579 6.81130126251286 7.13419540777018 7.39835424201659 6.83219127042347 8.42649968594151 8.52054482063523 8.24199844330616 8.2726094374472 8.20512547706965 8.61824753039755 8.05282310070337 7.99514432698221 7.18059585011424 0.197294660823173 0.188123122680271 0.196021648458968 0.189677113669054 0.189052196848568 0.193373447072303 0.194809977339620 0.198070761555684 0.186405716784257 0.191030273614316 0.189362279878066 0.186385581338152 0.185596414531554 0.188630067316377 0.195418546160719 0.185596414531554 0.189683567159178 0.188587342945764 0.185596414531554 5 5|0 +|/ 19609032 19609522 19609258.2 19607699 19610179 + gene protein_coding_gene TRUE TRUE AT5G48340.1 similar to Os01g0897100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045085.1); similar to hypothetical protein DDBDRAFT_0218214 [Dictyostelium discoideum AX4] (GB:XP_641450.1); contains domain no description (G3D.1.10.418.10) 1.20034601359895 11.2121920087579 3.32637665519352e-07 2.12091690522943e-05 15.0946862751534 15.2958835653768 1.20034601359895 0.116900925314826 AT5G19930_at 8.12772254859962 8.30635279062276 8.96990679847334 9.10209675753621 8.81799079371917 8.84414539287742 6.8745825692778 7.43218677418107 7.58250330962933 5.91048083389444 7.76544803156566 7.75069255213755 7.50859311203792 7.74546836806793 7.25607621489863 7.87136034384907 7.4586566469769 7.90199209440685 6.3707114727181 0.215597324157195 0.210946263325189 0.225213751458719 0.215944600216670 0.213832428524968 0.22367702089541 0.220172106672971 0.222917829565294 0.220634672098687 0.217997869931646 0.210946263325189 0.2153193264956 0.215356543731825 0.213459959158313 0.223175222717623 0.210946263325189 0.220958845963635 0.215316898032693 0.21522028741154 5 5 - 6737881 6738488 6738206.636 6737580 6739350 - gene protein_coding_gene TRUE TRUE AT5G19930.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G78620.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67826.1); similar to Os01g0178200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042190.1); similar to Os01g0507300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043151.1); contains InterPro domain Protein of unknown function DUF92, transmembrane; (InterPro:IPR002794) 1.14218890669658 11.2098102157685 3.33332639285352e-07 2.12222717565380e-05 15.0928455697551 15.4486319494475 1.14218890669658 0.103975392744285 AT5G51830_at 4.82407062932312 5.69020811173222 7.35529630904745 7.27413801865065 6.6618879210252 5.62229480691408 3.9078550418076 3.93638153865836 3.97879453362315 3.33128061824578 5.3036652073494 5.20131261779219 5.17464647918074 5.59449765783168 4.77324863482397 5.24356081449625 5.2021009058181 4.62742923820146 3.46341957468953 0.261365727991213 0.250024086513541 0.266430473764661 0.268089710665328 0.257003306932132 0.261966770471536 0.263688188502449 0.253497751505088 0.251842144856029 0.258125401440062 0.252868430812502 0.254256371304672 0.255278798884321 0.257412695403022 0.249807287982069 0.254314659588742 0.256636249608221 0.256090598986736 0.256865703050474 5 0|5 /|+ 21087865 21088612 21088219.7 21086798 21088961 + gene protein_coding_gene TRUE TRUE AT5G51830.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66430.1); similar to fructokinase (GB:AAB57733.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) 1.84383410955646 11.1988524697216 3.36550359070888e-07 2.13957160689959e-05 15.0843711527100 10.0246278487896 1.84383410955646 0.234637390457859 AT5G35570_at 3.80427157163406 4.36178813057389 4.99167125644301 5.61167119290202 6.4611869516607 5.79108736087845 4.7386880337878 4.66608966711699 3.70937568934152 2.79835917313728 4.84303138872165 5.48077260210164 4.82637121254872 5.24207319438536 4.59715837399194 5.03489467925816 4.56402969670216 4.54938036228186 2.80048697307056 0.276789539650122 0.267911551642418 0.288281179316418 0.271393574836761 0.269830291369423 0.281389787444938 0.283604944768223 0.267911551642418 0.282672126186205 0.272289066420755 0.267911551642418 0.267911551642418 0.270578397807622 0.269475635351645 0.279598359812543 0.270185023773776 0.276957223272063 0.274965167490796 0.273681135807063 5 5|0 -|/ 13768295 13769380 13768682.3 13766941 13770688 - gene protein_coding_gene TRUE TRUE AT5G35570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37980.1); similar to Os09g0442900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063294.1); similar to Plant protein family, putative [Medicago truncatula] (GB:ABE88136.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) 1.55533408329600 11.1928019424304 3.38341544459603e-07 2.14780953542022e-05 15.0796876047841 9.05078404592398 1.55533408329600 0.185542413725508 AT5G38840_at 7.07589068336188 7.50383809540986 8.05582996243061 8.01642016264223 8.3323509733588 8.31502481289396 6.86943737548044 6.73856703698117 7.49371922057023 7.48662775422244 8.26416043986806 8.74164479512288 8.38528389312283 8.36125198058697 8.29241845859745 8.2418969411957 8.22817448306009 8.05427882805266 7.16197414042503 0.155445642807171 0.150305458667375 0.144307629036459 0.143602411366218 0.152899704265206 0.144889227065019 0.160323487684848 0.151993178779859 0.149089121744479 0.152203668286167 0.144005567586075 0.141669506205160 0.141669506205160 0.148914591734123 0.146381953652183 0.142969342805175 0.147824404070824 0.148954973643766 0.156239862173058 5 5|0 +|/ 15571451 15572042 15571656.8 15568526 15572307 + gene protein_coding_gene TRUE TRUE AT5G38840.1 forkhead-associated domain-containing protein / FHA domain-containing protein similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G47790.1); similar to Anion exchanger adaptor protein Kanadaptin, contains FHA domain (ISS) [Ostreococcus tauri] (GB:CAL50100.1); similar to Os06g0275900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057383.1); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984) 1.03666910120066 11.1895567708969 3.39306506588148e-07 2.14786038001135e-05 15.0771743627755 15.4643761040816 1.03666910120066 0.0778013739206422 AT5G08540_at 6.9717706197562 7.28605982023767 7.89392377929714 7.82244984345958 8.31697748346178 8.05474679920846 6.84983459513926 6.79859949454901 6.35548650258839 6.78799175626124 8.06449939882411 7.58440723575628 7.28690375825482 7.0322416173745 7.9098356911382 7.9806007992533 7.26392235753637 7.43113438032953 6.59163095569911 0.183558569582483 0.180180232867051 0.183309085682667 0.184542687021864 0.185062277183731 0.192899310325935 0.182739080315732 0.183138199111716 0.182954979521716 0.181908687135418 0.179125845557778 0.181389501711437 0.184980517940679 0.183672344689262 0.179769016343468 0.183298955445455 0.189475958131224 0.195666479436901 0.179165828245873 5 5|0 +|/ 2764459 2765406 2764939.9 2763824 2765735 + gene protein_coding_gene TRUE TRUE AT5G08540.1 similar to Os04g0527800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053370.1); similar to RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains (ISS) [Ostreococcus tauri] (GB:CAL57083.1) 1.01814088028085 11.1894432093480 3.39340328621698e-07 2.14786038001135e-05 15.0770863986445 14.5730767508843 1.01814088028085 0.0724510648772276 AT5G26030_at 8.78670880207274 9.07701185735736 9.7951768959384 9.84165158611208 9.40488227392807 9.15683937421644 8.34405920384362 8.5079504454501 7.46331889856859 7.2444479985298 8.4679343881953 8.46063393856832 8.32688490757524 8.54494611707655 8.07326392024865 8.27820333835996 8.0625880277138 8.69724725588694 6.89171279243433 0.164139212431593 0.159156829417318 0.161801273190005 0.162601588654056 0.160270952491899 0.160803975796620 0.162432024943008 0.161691745873655 0.169445857084575 0.182714084799764 0.165717836552686 0.161044031908418 0.164891810917547 0.166457593260947 0.166239108785942 0.163762404269723 0.173042173972472 0.163935925570296 0.183578903230494 5 5|0 +|/ 9097955 9098722 9098360.333 9096463 9099188 + gene protein_coding_gene TRUE TRUE AT5G26030.1|AT5G26030.2 ferrochelatase I|ferrochelatase Identical to Ferrochelatase-1, chloroplast/mitochondrial precursor (EC 4.99.1.1) (Ferrochelatase I) (Protoheme ferro-lyase 1) (Heme synthetase 1) (HEM15) [Arabidopsis Thaliana] (GB:P42043); similar to ferrochelatase II [Arabidopsis thaliana] (TAIR:AT2G30390.1); similar to ferrochelatase [Hordeum vulgare] (GB:AAB71887.1); contains InterPro domain Ferrochelatase; (InterPro:IPR001015) 1.01742056444666 11.1850055536819 3.40664870172570e-07 2.15310087532287e-05 15.0736481826875 16.8961797048052 1.01742056444666 0.0723570046160447 AT5G19050_at 6.51644541343266 6.6533438784111 7.6493346145094 7.59328258117786 7.86563736577457 7.82451440880936 5.93193959184464 6.40406378356469 6.6252676774798 6.19749009119902 7.31765447755848 7.12767970161198 7.04771183422717 6.99659966949055 6.72391530715174 7.36218382811157 6.69747478633513 7.02946978638877 5.96677100433905 0.189413817098699 0.183900653992973 0.183664022728432 0.191509087059481 0.189458839977914 0.189720263668810 0.191405094486898 0.197336185621647 0.193779333337308 0.185225702613953 0.190162906674556 0.183588283796135 0.196615982588056 0.191908723756145 0.185941076979621 0.182234517717981 0.195734982713634 0.186723269698917 0.187119534360858 5 5|0 +|/ 6370505 6371621 6370968.143 6369269 6371906 + gene protein_coding_gene TRUE TRUE AT5G19050.1 similar to unnamed protein product [Kluyveromyces lactis] (GB:XP_455602.1); similar to Os07g0211800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059175.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Protein of unknown function DUF1749; (InterPro:IPR013744) 1.06570199597066 11.1805136644100 3.42011326064299e-07 2.15604930445658e-05 15.0701662923738 13.7053264204566 1.06570199597066 0.085915213121225 AT5G11110_at 3.33793387469155 3.62859905749694 4.63828799362041 4.55670311233647 4.16363086703949 3.58449048321508 3.20254121131264 3.15462849467268 2.46352983062156 2.98626574125129 3.58063904199563 3.52024459084176 4.33504279033745 4.48835481561322 4.0271228320432 4.39304603213666 4.75067081776154 4.00262651593794 2.59306938948828 0.230784382477043 0.221541448362424 0.230263454869392 0.228634365121636 0.219695401513511 0.241392301301571 0.232825440327387 0.232119910008079 0.236053459035819 0.23010223726368 0.219695401513511 0.227560686726097 0.219695401513511 0.229733264727262 0.219695401513511 0.222194242715177 0.230773607404832 0.22529837516174 0.220166216168985 5 5|0 +|/ 3540098 3540871 3540595.889 3536227 3541134 + gene protein_coding_gene TRUE TRUE AT5G11110.1 ATSPS2F (sucrose phosphate synthase 2F); sucrose-phosphate synthase Encodes a protein with putative sucrose-phosphate synthase activity. similar to ATSPS3F (sucrose phosphate synthase 3F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G04920.1); similar to ATSPS1F (sucrose phosphate synthase 1F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G20280.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to Sucrose-phosphate synthase 1 (UDP-glucose-fructose-phosphate glucosyltransferase 1) (GB:O22060); similar to sucrose phosphate synthase [Cucumis melo] (GB:ABC96184.1); similar to sucrose phosphate synthase [Actinidia chinensis] (GB:AAL86360.1); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria; (InterPro:IPR006380); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296); contains InterPro domain Sucrose phosphate synthase, plant; (InterPro:IPR012819) 1.18055794848623 11.1801322428330 3.42125924447352e-07 2.15604930445658e-05 15.0698705565065 7.19243859515006 1.18055794848623 0.113326568467611 AT5G50230_at 8.48545818215778 8.65900143530831 9.70268007903919 9.49923215143415 9.6277760880015 9.7086974590852 8.20269139016261 8.46671676053528 8.66183993565456 8.21376393863907 9.22975927387764 8.99461677913943 9.32604904899542 9.3297358891652 8.94993067731783 9.42903995635682 8.8389354751773 9.04955045003429 8.11217028552953 0.139900891937629 0.128042434612284 0.136555551806036 0.134746330230265 0.131799632569216 0.132725587676841 0.138985986611051 0.142703205458302 0.160592619943545 0.140460046299538 0.136206703169364 0.135803252597283 0.131311671483719 0.136913146435931 0.133032789600022 0.132489206407953 0.147661255858413 0.140155411353346 0.152173279219724 5 5 - 20465886 20466413 20466138.545 20465596 20468107 - gene protein_coding_gene TRUE TRUE AT5G50230.1 nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to Os03g0746600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051251.1); similar to putative WD-repeat protein [Oryza sativa (japonica cultivar-group)] (GB:AAK71564.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.997661821416306 11.1766154385185 3.43184520085222e-07 2.15958156000384e-05 15.0671432301684 17.7803868167317 0.997661821416306 0.0665228035244783 AT5G39600_at 6.01231651713992 5.94185823502139 6.45692034295277 6.57139774488747 7.3038692250634 6.94414067921148 4.92469324998557 5.39228730232007 5.21658474478747 5.23743017995153 6.30637398115474 6.57228110348763 6.5986132825148 6.08106552317062 6.33253341294 6.71877370262049 6.38915243334002 6.36760382881865 5.7114384423652 0.20419883748862 0.201953856070953 0.202029177511911 0.201747781341736 0.204689298971922 0.204911242626984 0.200182071564050 0.205625955920359 0.218639318345666 0.210382171216731 0.205539784309036 0.199734725832643 0.207019861796501 0.216112013855847 0.205340530205732 0.199734725832643 0.203602671169191 0.212410356346274 0.208550463275806 5 5|0 -|/ 15871651 15871945 15871798.2 15871157 15872420 - gene protein_coding_gene TRUE TRUE AT5G39600.1 similar to hypothetical protein [Prunus persica] (GB:AAO14625.1) 1.14180418735825 11.1748277636177 3.43723994128579e-07 2.15984159823476e-05 15.0657564739188 12.0980774691764 1.14180418735825 0.104711410202958 AT5G49880_at 5.83194764476677 6.40296221440972 7.24484981068744 7.19680636064093 7.88671679572231 7.43848061193937 5.88389893623038 5.52031085090722 5.35066783857378 5.60849363513987 6.33222787017932 6.8819030581119 6.77379294791593 6.91207433210793 6.13405571772243 6.87049113843758 6.30812453755756 6.42742406455148 5.50817024379658 0.224165926575557 0.216888137612510 0.216922903742782 0.218712008194846 0.220847029245993 0.225428123719576 0.226383778839765 0.224134931027383 0.216503367982447 0.228678944612955 0.215779520038715 0.226852668430007 0.222982953636378 0.220551977077095 0.217337842072121 0.213426461277591 0.229971849723495 0.219946215854467 0.217346978706868 5 0|5 /|+ 20303559 20304971 20304463.3 20299391 20305310 + gene protein_coding_gene TRUE TRUE AT5G49880.1 mitotic checkpoint family protein similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to Os01g0877300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044973.1); similar to PREDICTED: similar to mitotic checkpoint protein [Gallus gallus] (GB:XP_425231.2); contains InterPro domain Mitotic checkpoint; (InterPro:IPR008672) 1.31141730949430 11.1700219460683 3.45178842065026e-07 2.16419555800563e-05 15.0620271390071 12.7103077935762 1.31141730949430 0.140747580989599 AT5G56520_at 3.70854217915188 3.5965172675033 5.1724902400531 4.9784373504687 6.16670158356318 5.45094445712681 4.12054100198977 3.9355928912403 3.58149555080437 3.65104249715873 4.21620663619218 4.1207864750151 4.74131247903705 4.76183132355079 4.788820384356 4.96931017355925 4.86081154394755 4.51899221217587 3.78408185622015 0.245947031670035 0.235514181003759 0.242262740036156 0.237078020822562 0.244858354482267 0.245411918365683 0.240861350346797 0.238123412884277 0.237704664986943 0.240430789625061 0.235523064379898 0.235186590087585 0.239003533424769 0.238420081781846 0.237892814435876 0.236490955510573 0.234297838603045 0.235120542652717 0.236336227246067 5 5 + 22902462 22902702 22902574.727 22902397 22903141 + gene protein_coding_gene TRUE TRUE AT5G56520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55365.1); similar to hypothetical protein MtrDRAFT_AC152752g20v1 [Medicago truncatula] (GB:ABE87470.1) 1.27594867079156 11.1690104818661 3.45485891035809e-07 2.16419555800563e-05 15.0612419952381 8.78845364049061 1.27594867079156 0.133680686710363 AT5G57490_at 7.11945817582557 7.47776820487768 7.92424671019508 7.84209548659068 8.50495415556285 8.19696280340123 7.19168514159664 7.20054972725102 6.71726393214935 6.80619503322248 8.40729424314607 8.56189944617057 7.93873387153047 8.09408471998371 8.37899540657372 8.18807443766491 7.65072468252048 7.76825502038483 7.13494695789742 0.166469983488856 0.159093049411081 0.159618995740689 0.167450221925315 0.159091091979777 0.166980745937956 0.16701383360929 0.163849633293331 0.176251673209072 0.169354390708883 0.161011914836241 0.161651765168048 0.158168948303689 0.173236613931353 0.155219432139124 0.153978240529015 0.181080055711829 0.171968127394302 0.160815212347543 5 5|0 -|/ 23301156 23301843 23301452.3 23300906 23303160 - gene protein_coding_gene TRUE TRUE AT5G57490.1 porin, putative similar to porin, putative [Arabidopsis thaliana] (TAIR:AT5G67500.1); similar to porin, putative / voltage-dependent anion-selective channel protein, putative [Arabidopsis thaliana] (TAIR:AT5G15090.1); similar to VDAC3.1 [Lotus corniculatus var. japonicus] (GB:AAQ87023.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) 1.05353594864509 11.1676006689817 3.45914361768397e-07 2.16419555800563e-05 15.0601474942431 15.1870365687892 1.05353594864509 0.0830071184033043 AT5G47240_at 8.95564447433028 9.41748734917546 8.71474299085813 8.97043234999336 9.41883116226014 8.77844870309201 8.12188156970375 8.30768214887247 5.48821328252035 7.02480440409716 9.09132053243645 8.73775614288165 8.66059034295803 8.73569829442895 8.79222740564396 8.94340046979558 7.96382492047863 8.98894170151168 6.4519325636852 0.212119733163195 0.207102203446750 0.213689539237523 0.213928829573231 0.202019788841735 0.207149400268794 0.210033469711419 0.208372510809792 0.269108613845204 0.209442580093797 0.206809250961206 0.202019788841735 0.213827225180757 0.209863513083680 0.208740914473259 0.202019788841735 0.232071184463294 0.202306872686599 0.214949240231309 5 5|0 +|/ 19201835 19202658 19202323.1 19200828 19202871 + gene protein_coding_gene TRUE TRUE AT5G47240.1 ATNUDT8 (Arabidopsis thaliana Nudix hydrolase homolog 8); hydrolase Identical to Nudix hydrolase 8 (EC 3.6.1.-) (AtNUDT8) (NUDT8) [Arabidopsis Thaliana] (GB:Q8L7W2;GB:Q8LAJ0;GB:Q9LVT5); similar to ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2), ADP-ribose diphosphatase/ NAD binding / hydrolase [Arabidopsis thaliana] (TAIR:AT5G47650.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64957.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG; (InterPro:IPR003293) 1.34375490443153 11.1655417657842 3.4654114255232e-07 2.16499289213835e-05 15.0585487799348 16.3660788733863 1.34375490443153 0.147176601193036 AT5G49980_at 9.72194007517557 9.75304576701875 10.0649830108992 10.1991554815934 10.4484407198900 10.5888513597120 9.10375606349151 9.3119668309418 8.67665298917752 9.0687941129021 10.1461482307238 10.0121337371716 10.1173838069824 10.1220352349285 9.4467303770822 9.97050997620363 10.3398975538655 9.98963312849576 9.17793193693379 0.0990617585093496 0.094906018931014 0.0977921800201725 0.0966246745205735 0.0974491004806958 0.0993293957882127 0.0978320260770169 0.096610963248767 0.116069211115821 0.110792275095598 0.0953300648730057 0.094906018931014 0.0967714750109525 0.098199025929507 0.097954624774427 0.096043725314238 0.095593362123819 0.0973998313466884 0.105862262171423 5 5 - 20351651 20352212 20351976.727 20351190 20353891 - gene protein_coding_gene TRUE TRUE AT5G49980.1 AFB5 (AUXIN F-BOX PROTEIN 5); ubiquitin-protein ligase similar to F-box family protein (FBX14) [Arabidopsis thaliana] (TAIR:AT4G24390.1); similar to Os02g0759700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048183.1); similar to F-box containing protein TIR1 [Populus tremula x Populus tremuloides] (GB:AAK16647.1); similar to Putative F-box containing protein TIR1 [Oryza sativa (japonica cultivar-group)] (GB:AAN64135.1); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.94813989243865 11.1555262740704 3.49607768554960e-07 2.17787513824961e-05 15.0507668628568 19.3952767562667 0.94813989243865 0.0495663986820103 AT5G07910_at 7.56636020304027 7.90443801324725 8.77736685463843 8.70364903314244 8.47334108701894 8.70078094349325 7.67811327769571 7.83171913059744 6.64736180597979 6.53964167992314 7.67481956511614 7.31445486567548 7.59111442055765 7.83694088397749 7.57980667817985 7.76293639870116 7.56432000683343 7.50087543548117 6.20745437368557 0.189582452202733 0.192662662036660 0.191927388566983 0.190440055289521 0.189582452202733 0.194224629017013 0.189698335531322 0.199653169477738 0.210579680288651 0.209168414156289 0.195199078172526 0.197922650732041 0.192903510289503 0.203820085071505 0.196854830009014 0.189582452202733 0.202206679148350 0.207063734059764 0.205103946802305 5 5|0 -|/ 2522361 2523022 2522722.333 2521535 2524202 - gene protein_coding_gene TRUE TRUE AT5G07910.1 leucine-rich repeat family protein similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G30100.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94607.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591) 1.02848303435695 11.1532864632366 3.50297601587208e-07 2.17904163344074e-05 15.0490254199822 15.2384599770316 1.02848303435695 0.0764295622611013 AT5G67290_at 6.62046231991744 7.01698344960586 7.9682313667888 8.0520953697389 8.1610540851266 7.91464175085283 7.12929804202131 7.02755538427387 6.94891156826513 6.74159646452587 7.63337151766022 7.792433674842 7.75788336818586 7.86366973515946 7.65478132491996 8.01773806325546 7.79031197874196 7.91668556643415 6.61729780511806 0.173899550448517 0.163833143696278 0.166879674486507 0.167236706830088 0.165653506044077 0.178420867902278 0.167052272581729 0.170837858445835 0.173121439294555 0.16865394740384 0.168398125582510 0.161038437029153 0.160557938999297 0.169421930221322 0.167305830390009 0.172860700461169 0.172108219109538 0.160605905454221 0.162844055927640 5 5|0 -|/ 26865670 26866303 26866046.3 26865374 26867072 - gene protein_coding_gene TRUE TRUE AT5G67290.1 FAD-dependent oxidoreductase family protein similar to Os07g0155100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058918.1); similar to D-amino acid oxidase [Zea mays] (GB:CAL58663.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 1.05476081759285 11.1433601715387 3.53372634715371e-07 2.19435511883002e-05 15.0413027670007 14.7726042291838 1.05476081759285 0.0839507391819559 AT5G10490_at 6.15752230658816 6.53260160514036 7.82943773325587 7.55412434972305 7.62711742385146 7.55159586011993 7.04234368559919 6.77166817512799 6.09636759791236 6.34574265914967 7.38679165351012 7.58330639996405 7.01801056531183 7.13537039662923 7.13015468981507 8.07522797901197 7.68919863769409 7.17532432659278 6.23521725574413 0.204250555704281 0.190589204743251 0.191071420092909 0.194888951245319 0.198019331994197 0.194926972652571 0.190807337185693 0.191295013786143 0.217964796293485 0.196191238908136 0.192146648519212 0.194468064333140 0.198001979723737 0.196437296963406 0.203248669801949 0.191478946135182 0.198359116670143 0.195602786048015 0.199441696804701 5 5 - 3300381 3300939 3300708.455 3300226 3304762 - gene protein_coding_gene TRUE TRUE AT5G10490.1|AT5G10490.2 MSL2 (MSCS-LIKE 2) A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. similar to MSL3 (MSCS-LIKE 3) [Arabidopsis thaliana] (TAIR:AT1G58200.2); similar to 117M18_28 [Brassica rapa] (GB:AAZ66947.1); contains InterPro domain MscS mechanosensitive ion channel, C-terminal; (InterPro:IPR011066); contains InterPro domain MscS Mechanosensitive ion channel, transmembrane; (InterPro:IPR011014); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain MscS Mechanosensitive ion channel; (InterPro:IPR006685) 1.09396607104387 11.1420792402519 3.53771583420843e-07 2.19435511883002e-05 15.0403056073142 13.9457758517598 1.09396607104387 0.0940645112740124 AT5G22060_at 9.05012248726773 9.22987966791465 9.99255579922398 10.1890966863434 9.33475345489557 9.13023409022145 7.87369233139814 8.13958631600665 7.69511909573596 7.21816145674457 8.46269471854537 8.6398808023782 8.1123142971023 8.13149372117216 8.09120780561187 8.30699401701255 8.21977378149464 8.15654400908867 7.03200799233593 0.186059731375195 0.183285117475793 0.188325394870112 0.181981771912087 0.184309573479109 0.183023669114498 0.189347023402528 0.190847247358373 0.203171817640720 0.182951120095256 0.181981771912087 0.181981771912087 0.190098761838476 0.195175164972799 0.197904268807438 0.181981771912087 0.197465611913564 0.186228897817349 0.191936246158771 5 0|5 /|- 7303827 7304395 7304124.9 7303625 7305800 - gene protein_coding_gene TRUE TRUE AT5G22060.1 ATJ2 (Arabidopsis thaliana DnaJ homologue 2) Co-chaperonin similar to E. coli DnaJ Identical to Chaperone protein dnaJ 2 (AtDjA2) (ATJ2) [Arabidopsis Thaliana] (GB:P42825;GB:Q43293;GB:Q9C582); similar to ATJ3 (Arabidopsis thaliana DnaJ homologue 3) [Arabidopsis thaliana] (TAIR:AT3G44110.1); similar to DnaJ-like protein [Solanum tuberosum] (GB:ABB16989.1); similar to DnaJ-like protein [Lycopersicon esculentum] (GB:AAF28382.1); similar to seed maturation protein PM37 [Glycine max] (GB:AAD51625.1); contains InterPro domain DnaJ central region; (InterPro:IPR001305); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.01917825973477 11.1386260042790 3.54849542532013e-07 2.19789708002951e-05 15.0376167068145 16.9075946419870 1.01917825973477 0.0741249398825895 AT5G41140_at 1.76841167171784 1.94475821703297 1.71802541075220 1.48266944060134 1.78854367637305 1.91926627725857 2.12521369782946 1.80677647219929 2.53451869926094 2.7966168667924 6.31051526686782 6.29522604656773 4.11676137776495 5.31627092397237 5.67406323438513 4.17801770073073 2.97639003645396 3.73946473717229 2.39305178643758 0.280549128518155 0.278104643323214 0.277633348883910 0.281228508317361 0.285053079150186 0.277633348883910 0.281463997188705 0.281316913384072 0.279550978919853 0.277987433678205 0.30701978207329 0.300962108893305 0.278493665775158 0.284313324716789 0.302397719786184 0.277633348883910 0.277633348883910 0.280056528432022 0.278602980906009 5 5 + 16488950 16489729 16489218.091 16485675 16490038 + gene protein_coding_gene TRUE TRUE AT5G41140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63300.1); similar to putative myosin [Oryza sativa (japonica cultivar-group)] (GB:AAO72668.1); contains domain no description (G3D.1.20.5.170); contains domain MYOSIN HEAVY CHAIN-RELATED (PTHR23160); contains domain Tubulin chaperone cofactor A (SSF46988) 1.0334728672719 11.1340626244429 3.5627952437037e-07 2.20360621349177e-05 15.034061861623 5.51949199946376 1.0334728672719 0.078350238985769 AT5G47020_at 8.81034941789359 8.81988178661237 9.67569176691339 9.45318398872492 10.1744313412363 9.86695704015037 8.25449467780098 7.99354843380294 9.00321022760817 8.6153710345233 9.99595279332032 9.21159534398678 9.5510425149833 9.53889107348402 9.53526004981277 9.26324622246366 9.39374331296686 9.8280535023914 8.74069185974785 0.122976136329029 0.117659573849254 0.127230956885883 0.126243159952582 0.121775440671818 0.128636971200375 0.124372437649092 0.137541508498904 0.138469912278482 0.127863694653494 0.117578363080514 0.117578363080514 0.118449846409572 0.120338640861529 0.118499123450093 0.121936332348850 0.120908167711674 0.126268217515355 0.130824904730841 5 0|5 /|+ 19106241 19106959 19106571 19099232 19107244 + gene protein_coding_gene TRUE TRUE AT5G47020.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT4G32920.1); similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G11700.1); similar to hypothetical protein MtrDRAFT_AC144766g15v1 [Medicago truncatula] (GB:ABE91983.1); similar to Thiolase [Medicago truncatula] (GB:ABE80802.1); similar to hypothetical protein MtrDRAFT_AC146940g33v1 [Medicago truncatula] (GB:ABE90405.1) 1.03814809147257 11.1315119076020 3.57081546364529e-07 2.20452092626231e-05 15.0320741149462 18.2941410444598 1.03814809147257 0.079724306910835 AT5G17520_at 8.74064067970293 8.66017311430773 9.15220739727855 9.01778149048957 9.56507436250443 9.29293187108985 9.11755088996388 9.14629846651192 7.69378907342394 8.640990170811 9.93044492234333 9.71597038305171 9.88251550322285 9.70596190344502 9.77860338035978 9.82647905598649 9.59924184450989 9.5871797316579 8.19475489442855 0.126324969483296 0.121247958020903 0.125710020447975 0.124669319482805 0.123235481672936 0.130771327602985 0.122728743883763 0.121805841563422 0.154755707799312 0.127977497273278 0.121937339776407 0.121247958020903 0.121247958020903 0.129539082731287 0.127473041399630 0.121247958020903 0.137875240733401 0.127781058078080 0.141700395511898 5 5|0 -|/ 5772823 5774308 5773529.556 5772585 5775347 - gene protein_coding_gene TRUE TRUE AT5G17520.1 RCP1 (ROOT CAP 1) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. Identical to Maltose excess protein 1, chloroplast precursor (Root cap protein 1) (MEX1) [Arabidopsis Thaliana] (GB:Q9LF50;GB:Q9SPJ2;GB:Q9SPJ3); similar to maltose transporter [Malus x domestica] (GB:ABG47411.1) 0.958810601868305 11.1303601817205 3.57444326640286e-07 2.20452092626231e-05 15.0311764099505 18.0514877690444 0.958810601868305 0.054569410389646 AT5G61450_at 6.44024151920078 6.27555111479395 7.72360112724696 7.59892962238798 7.75169343493773 7.1020344681227 5.82143976028964 5.45712463197054 5.38722045497129 5.38877745166542 6.56809653914928 6.48892115045277 6.41562292387592 6.46718650573408 6.1872238577443 6.37845447951708 6.13802657699557 6.26430619042908 5.32870981066486 0.246344118274404 0.240167387785869 0.248620304145959 0.250791167215581 0.241842156038014 0.256566125778623 0.240167387785869 0.249055635488604 0.251223188057598 0.247136184942703 0.244794761146062 0.241632592879565 0.245189047335266 0.246403637407774 0.240167387785869 0.240167387785869 0.252565254184797 0.254472208651658 0.243064387777522 5 5 - 24727605 24728448 24728042.909 24727259 24730171 - gene protein_coding_gene TRUE TRUE AT5G61450.1 2-phosphoglycerate kinase-related similar to Os03g0102400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048662.1); similar to 2-phosphoglycerate kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93493.1); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 1.27035963941509 11.1165770721838 3.61817076961815e-07 2.22831992678762e-05 15.0204246978043 12.637184801746 1.27035963941509 0.133762210230208 AT5G56230_at 3.84410850704075 4.09205342547745 5.16787168789974 5.3786901761358 4.63257466277446 4.89095727025654 2.67598803753588 2.79617591623786 4.11655057660813 3.39230022854002 4.09253034492701 3.96569596380406 4.14701894621386 4.78536706200494 3.59161613126022 4.39756683475656 4.04455184386588 4.57703562789654 3.97454197546325 0.238182320324547 0.239305530398743 0.242348204324007 0.237639052792282 0.247510016567979 0.234953697535248 0.258617363907697 0.246193486905965 0.245899577746527 0.239982836824112 0.241379108458204 0.234558478052394 0.238387967391798 0.234558478052394 0.234558478052394 0.242437360050498 0.241476871884369 0.239194602051742 0.241108790275868 5 5 - 22775998 22776508 22776193 22775994 22776597 - gene protein_coding_gene TRUE TRUE AT5G56230.1 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT1G55640.1); similar to prenylated rab acceptor family protein [Thlaspi caerulescens] (GB:AAY18432.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) 1.01890861424882 11.1082305790092 3.64493286661438e-07 2.24161776183792e-05 15.0139062075151 8.19878767935894 1.01890861424882 0.0748604583709554 AT5G54760_at 11.456328431215 11.6434861059263 12.4130468495008 12.4945468687866 12.4008894876607 12.2889634214044 11.5774049223556 11.6604966200722 11.3052791450734 11.2067329295211 12.3865770642175 12.0692716483093 12.3364322096557 12.2229186879720 12.1259222186652 12.3298360971709 12.3704773959406 12.1369847808652 11.1047756359985 0.0743848005220791 0.0713222958798112 0.0744070934586992 0.0726508377033717 0.072035954130936 0.0788489577914586 0.0713222958798112 0.0713561431365645 0.0759721655631025 0.074075591375248 0.0747868763163159 0.0716880087101149 0.073583991954745 0.0741838588158976 0.0751028203825945 0.0716265975818564 0.0777191329733799 0.0727490939077556 0.0750524260090549 5 5|0 +|/ 22262203 22262573 22262347 22261090 22262963 + gene protein_coding_gene TRUE TRUE AT5G54760.1 eukaryotic translation initiation factor SUI1, putative Identical to Protein translation factor SUI1 homolog 1 [Arabidopsis Thaliana] (GB:P41568;GB:Q9SLK5); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT4G27130.1); similar to Protein translation factor SUI1 homolog (Translation initiation factor nps45) (GB:Q9SQF4); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874) 0.928319623132213 11.1060423379831 3.65198477068725e-07 2.24277341309803e-05 15.0121962623396 23.7183445465555 0.928319623132213 0.0427770416777817 AT5G04540_at 6.57208688738118 7.03153846491786 8.01566226585001 8.01225948998104 8.69665388431315 7.933709490424 6.66695674149805 6.67812187189684 6.61366923447969 6.70584618570763 7.73708642452541 7.9370380806076 7.9276647093221 8.06695646546499 7.55716914290007 8.31175220514711 7.84047711870102 7.77144841217336 6.4131894773009 0.205031887369451 0.197188828191396 0.197464920603372 0.195311219903666 0.196807618532287 0.19811637801787 0.205758698328528 0.196321056730735 0.220199113356212 0.197867216494043 0.197469768099438 0.194996271940378 0.194401881642342 0.203214145146576 0.195712136944766 0.194895090159755 0.203933823818760 0.200556903973764 0.198118984814463 5 5 - 1296835 1297462 1297041.818 1296443 1302445 - gene protein_coding_gene TRUE TRUE AT5G04540.1 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase similar to inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase [Arabidopsis thaliana] (TAIR:AT3G10550.1); similar to PREDICTED: similar to Myotubularin-related protein 2 isoform 1 [Apis mellifera] (GB:XP_395034.2); similar to Os08g0556700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062478.1); contains InterPro domain Myotubularin-related; (InterPro:IPR010569); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387); contains InterPro domain GRAM; (InterPro:IPR004182) 1.37176303095552 11.0985492879966 3.67624472336947e-07 2.25447873236671e-05 15.0063379840982 14.6865073215417 1.37176303095552 0.154136840598628 AT5G62460_at 6.80988120610957 7.19412796366282 7.85108355557445 7.91371027526631 8.75812698159576 8.12914600092696 7.31072486619118 7.22178769213627 5.80033856725384 6.63555124032396 7.71925279622602 7.67184085664274 7.69671393613668 7.7018461493173 7.4806768676953 7.73974968623332 7.27426040277126 7.60718999423199 6.02167511621859 0.251322471711036 0.246762067751940 0.253541199744485 0.258270299081612 0.248254232993195 0.270520650122784 0.249413125651799 0.250881676637572 0.256533558881857 0.246864169453813 0.246711478449131 0.241000094068478 0.246851377035902 0.25262821284025 0.249294027918662 0.240765984047286 0.254052645592294 0.265837432762519 0.245061588053824 5 0|5 /|+ 25093369 25094250 25093817.444 25092109 25094520 + gene protein_coding_gene TRUE TRUE AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G47550.6); similar to Zinc finger protein, putative [Solanum demissum] (GB:ABI34360.1); similar to Os11g0600700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068224.1); similar to Os08g0436200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061887.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.24390298310364 11.0905810441019 3.70223555978656e-07 2.26721096115036e-05 15.0001030439390 14.5305550563941 1.24390298310364 0.128933804624066 AT5G17440_at 6.25005156067042 6.03296586988032 7.16077743478495 7.17059764660787 7.94536809968091 7.55232524386264 6.09319573213857 5.6249750789388 5.84469387335345 6.19098991317274 6.94935999786633 6.96028898133225 7.27728443269108 7.38830336518534 6.81968640771339 7.5484922452232 7.13656750930094 7.12389493166553 6.79159034997446 0.189781521927088 0.194189673076553 0.194383321720986 0.192927742933152 0.195123443335531 0.192636106645922 0.195901469466711 0.200190159108551 0.210459557810023 0.202960597941103 0.196475145094254 0.187413531764322 0.196484998767986 0.198829929264249 0.187862246405424 0.190648909101174 0.205785980757113 0.197319104256041 0.187263192774209 5 5|0 +|/ 5752032 5753252 5752823.625 5749764 5753645 + gene protein_coding_gene TRUE TRUE AT5G17440.1 LUC7 N_terminus domain-containing protein similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to pre-mRNA processing factor [Triticum aestivum] (GB:AAY84869.1); similar to Os03g0843500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051864.1); contains InterPro domain LUC7 related; (InterPro:IPR004882) 1.16584836709955 11.0854113330425 3.71920494559879e-07 2.27439042255728e-05 14.9960550444547 13.4419034730068 1.16584836709955 0.112277127074719 AT5G62350_at 12.5441422234623 12.8044537725218 12.4073251877349 12.6011811081334 12.9823767641067 13.0973705156369 11.7371798580931 12.0212595020580 11.3348196957767 11.6991173246297 13.1529670135935 13.3128200531410 13.0398591700900 12.9382984713573 13.1818553602657 13.1598597822135 12.8441967893363 13.0352848472936 11.5636044157909 0.0692354462114208 0.06689156468879 0.0683570230232916 0.0656383922433906 0.0672973523832109 0.0686452211073975 0.0674327277623422 0.0673896751787912 0.0764363502054527 0.0720823678088102 0.0670774080748841 0.066753894386248 0.0672683670587074 0.0722728468556322 0.0721671345597325 0.0667002600545956 0.0677178984153477 0.068431149438666 0.0713086418651389 5 5 + 25054832 25055303 25055099.545 25054652 25055588 + gene protein_coding_gene TRUE TRUE AT5G62350.1 invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G47380.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 1.02296671435740 11.0624862212018 3.79548138927311e-07 2.31776638496752e-05 14.9780772204008 24.8322393654570 1.02296671435740 0.077250451989555 AT5G64950_at 3.32124068066169 3.2334982162424 4.52011735479571 4.33705001492802 4.27916257096007 4.38038692489389 2.90995220347068 3.00739582557586 3.10745602025342 3.08904652016348 3.59119781085928 3.71277263212449 3.46713242781019 3.66113994820189 3.46031368964624 3.6179611897053 4.19061946019578 3.40832416922920 2.95686455600924 0.225393543759276 0.223896381537185 0.221009345757591 0.224370135935142 0.220558738709614 0.219345543344682 0.233516332671986 0.223008748297359 0.226768509874703 0.227914273348546 0.226932994509287 0.219345543344682 0.227554560531027 0.228444850667043 0.219675213498954 0.220326587338222 0.225484630636957 0.227825819491529 0.226870768954877 5 5 + 25971761 25972228 25971962.364 25971070 25972386 + gene protein_coding_gene TRUE TRUE AT5G64950.1 mitochondrial transcription termination factor-related / mTERF-related similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G21150.1); similar to mitochondrial transcription termination factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37286.1); similar to Os06g0225100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057194.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.924358892701468 11.0599831795034 3.80391194079204e-07 2.31956043705754e-05 14.9761116738057 7.0935029896645 0.924358892701468 0.0427252375142513 AT5G19860_at 10.4682971576614 10.6884995116371 11.3304393659931 11.4511412368829 11.4780286902533 11.3262887864219 10.0270473530219 10.3586243565571 9.979038524285 10.2758205328866 11.3079439255770 11.0590669779231 11.3354444414405 11.2617893665138 11.0724923261197 11.4917766206417 11.1001892009403 11.0990176946383 10.3032300311871 0.0921141707429839 0.0915726293097819 0.0932836797852582 0.0931070646342836 0.093526851747978 0.101637416350427 0.0915726293097819 0.0973861062340757 0.0991646523765542 0.095313845809538 0.0918593924710922 0.0926000497568428 0.0932396167315579 0.0937863347761873 0.0956089176833072 0.0915726293097819 0.0988921316606064 0.0975048160564364 0.0973813858285337 5 5 - 6715361 6715635 6715499.364 6714266 6715877 - gene protein_coding_gene TRUE TRUE AT5G19860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55265.1); similar to Protein of unknown function DUF538 [Medicago truncatula] (GB:ABE78677.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.02039639913656 11.0584401989421 3.80911902966663e-07 2.31956043705754e-05 14.9748997660493 21.5920431899755 1.02039639913656 0.076619710754769 AT5G43010_at 8.42543363875615 8.57041652356177 9.62491391448147 9.56044631539084 9.68138398768864 9.38735991276345 8.58906023073 7.92437369716668 8.03830182042527 7.84258137787417 9.10172185148647 9.15732728898218 8.9498013088318 9.2293062698156 9.44335903768559 9.1585777711634 8.96160260688981 8.87571240355754 7.5750165795733 0.122676376955294 0.120767511908170 0.114676283012375 0.116112970784647 0.120143608217110 0.116613968681216 0.122518823151023 0.125885158075236 0.134748764511717 0.123901617563174 0.114676283012375 0.116981322721443 0.117330973367082 0.119946926784710 0.114850745768599 0.116013233052009 0.12262119918843 0.117605857516759 0.129602675874216 5 5 - 17265806 17266818 17266363.273 17265518 17268362 - gene protein_coding_gene TRUE TRUE AT5G43010.1 RPT4A (regulatory particle triple-A 4A); ATPase 26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA, similar to 26S proteasome regulatory complex subunit p42D, putative [Arabidopsis thaliana] (TAIR:AT1G45000.1); similar to 26S proteasome regulatory particle triple-A ATPase subunit4b [Oryza sativa (japonica cultivar-group)] (GB:BAB78495.1); similar to AAA ATPase; 26S proteasome subunit P45; Nucleic acid-binding, OB-fold [Medicago truncatula] (GB:ABE79655.1); similar to 26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum] (GB:BAC23035.1); contains InterPro domain 26S proteasome subunit P45; (InterPro:IPR005937); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.23862390901904 11.0517723947518 3.83171009924753e-07 2.33004471876480e-05 14.9696603554808 17.4345781908636 1.23862390901904 0.128740859370956 AT5G66070_at 6.61263793684057 6.33015245114483 7.46275781272181 7.41919383442228 7.0433008148958 7.06338321572272 5.07544637525631 5.70765805186806 5.25921849209382 4.6697728849085 6.04608011266387 5.41743226154109 5.61574686113471 6.31455960725305 5.56471969533898 5.72906723412914 6.54948937200801 6.09044820000073 4.58140756000593 0.224562042028532 0.230405387530858 0.226458928083349 0.232431348811805 0.219048379186892 0.232580155252138 0.228608991910507 0.228646374634888 0.237216225274392 0.232017393378886 0.217825117274846 0.219776430910054 0.217825117274846 0.220315564017703 0.222801772057386 0.223073195369259 0.217825117274846 0.232657256107850 0.231425444700619 5 0|5 /|+ 26439467 26440208 26439765.2 26439081 26440466 + gene protein_coding_gene TRUE TRUE AT5G66070.1|AT5G66070.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding Identical to RING-H2 finger protein ATL5P (ATL5P) [Arabidopsis Thaliana] (GB:Q9FKX5); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G17730.1); similar to Os10g0544600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065202.1); similar to Os06g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058595.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79837.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)|similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G17730.1); similar to Os10g0544600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065202.1); similar to Os06g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058595.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79837.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.19741424400125 11.0466997525103 3.84899417881113e-07 2.33727699712927e-05 14.965671886573 11.9656875934481 1.19741424400125 0.120119232562557 AT5G55600_at 6.27812594901704 6.65635882861581 8.01206211852212 8.06152981692401 8.6501862666797 7.85101428823503 6.5563093911867 5.83150153661972 5.31949606605691 6.24162852166692 7.74387156254301 7.72343027189542 7.58561505756458 7.60151951193659 7.04341931846965 8.21567754002925 7.55445138297805 7.41347443548213 7.07984252728887 0.225787424191477 0.211953487603586 0.214013019629047 0.219581744766327 0.212431752806139 0.221544260244287 0.222702450161947 0.219979256269049 0.244572306979167 0.226744932818594 0.219268658212875 0.211902348080376 0.211902348080376 0.21725869882211 0.220894322703096 0.215785559688885 0.233564223439974 0.223915888538656 0.219313743585751 5 5|0 -|/ 22539467 22540080 22539742.3 22539075 22542871 - gene protein_coding_gene TRUE TRUE AT5G55600.1 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein similar to agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G68580.2); similar to putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31149.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025) 1.60482543816925 11.0426064643006 3.86300308607573e-07 2.34250299957552e-05 14.9624518783298 14.1490550695333 1.60482543816925 0.198034538878001 AT5G24890_at 7.77294905438451 7.92561730572193 8.9686475544137 9.04972511040458 9.69989988303327 9.14738612485136 8.39395259188841 7.9823580584912 7.38441882243669 7.70362211357046 9.0750778097973 8.4926559217454 8.73524026251157 9.01855907582536 8.5936178853075 9.04837741007921 9.20383787208296 8.44618418341198 7.726436150575 0.131305908809010 0.133793044332816 0.129206519742179 0.12634586941277 0.136310617973591 0.142427107320145 0.12634586941277 0.137671762965355 0.14134357982622 0.140732489572026 0.128034095392159 0.128719111972520 0.132063180202318 0.129954869337211 0.132434874762925 0.129320306681446 0.137820731730794 0.128689337938131 0.138073632275775 5 5 - 8558391 8559022 8558808.182 8558194 8559409 - gene protein_coding_gene TRUE TRUE AT5G24890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31510.1); similar to putative KID-containing protein [Brassica napus] (GB:AAO53442.1) 1.209781761311 11.0403282016324 3.87082423623755e-07 2.34396742422859e-05 14.9606590598994 16.8333267094599 1.209781761311 0.122925184695797 AT5G14780_at 12.1999016170636 12.3086037214746 13.2331812480552 13.4124360056579 13.2987295942509 13.1215947052183 12.2994826222266 12.3722188785733 12.0636421685277 12.2723010235262 13.0365925010010 12.3748574384428 13.2620269396817 13.0203410234227 12.6464978902196 13.1233660774079 13.4659394450895 13.2427214957718 12.0204397243544 0.0653872054084948 0.0646602589330055 0.066778493042792 0.0649832997430957 0.0667560993908916 0.0663681175254076 0.0663430404603978 0.0653177187898596 0.0698703052353774 0.067318140160279 0.0650381796479805 0.0645484238551631 0.0653603870471597 0.0667989783499331 0.0655582077674497 0.0645484238551631 0.0671492458478396 0.065850415540641 0.0660546772921434 5 5|0 +|/ 4778357 4779160 4778726.8 4776946 4779497 + gene protein_coding_gene TRUE TRUE AT5G14780.1 FDH (FORMATE DEHYDROGENASE); NAD binding / cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor Encodes a NAD-dependent formate dehydrogenase. Identical to Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD- dependent formate dehydrogenase) (FDH) (FDH1) [Arabidopsis Thaliana] (GB:Q9S7E4); similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to Formate dehydrogenase, mitochondrial precursor (NAD-dependent formate dehydrogenase) (FDH) (GB:Q07511); similar to formate dehydrogenase [Solanum lycopersicum] (GB:CAH60893.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; (InterPro:IPR006139); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140) 0.937091112185636 11.0378270506293 3.87943037730165e-07 2.34590245021953e-05 14.9586903426535 25.3509371274896 0.937091112185636 0.0491352591215777 AT5G10980_at 11.5130172760433 11.5301837102154 12.4028298572115 12.3139794570822 12.6406057541964 12.4750839508930 11.4772393881669 11.3542873034534 11.5794981354049 11.0761183554918 12.1053446162671 12.2612953308661 11.9560660429978 12.1534532280364 12.0909806954921 12.1307720122265 11.8876400776305 12.0314467933426 11.0609350353877 0.0759649623236044 0.076580325368 0.0751298349986421 0.0772599163058621 0.0773457934201687 0.0827963715226192 0.0737904038352522 0.0748790909579487 0.076464213844785 0.0760630618512175 0.0746334767073859 0.0737371664197157 0.0748983434016338 0.0770210222778249 0.0761739232372285 0.0742922861523896 0.0779771035475281 0.0764527147726918 0.0767842145106532 5 5|0 -|/ 3472625 3473284 3472783.1 3472406 3473467 - gene protein_coding_gene TRUE TRUE AT5G10980.1 histone H3 Identical to Histone H3.3 (HTR8) [Arabidopsis Thaliana] (GB:P59169;GB:Q6NR95); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40030.3); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to disease-resistent-related protein [Oryza sativa] (GB:AAL78367.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.913858588110969 11.0263247481466 3.91927700800745e-07 2.36669698715690e-05 14.9496298195068 23.6213910163422 0.913858588110969 0.0389675769854667 AT5G05190_at 6.40303107703605 6.68969457672472 7.74394953387142 7.98111567391891 6.80939687777859 7.04994299279467 4.52587742090963 5.09519277523556 5.61591000973065 5.13514853019962 6.37008317884522 6.4180439052978 6.33985509152672 5.98233911863512 5.92259716811728 5.98710034683647 5.49704131038813 6.20095885886219 5.36915367916412 0.225544381011867 0.226727403106276 0.23501913280673 0.226033013045270 0.224604648885802 0.242349419455475 0.228661465018102 0.241549233676945 0.249727129766235 0.236886127546051 0.224604648885802 0.228802285821185 0.229232558498809 0.228166542186827 0.226976504333773 0.229921193110559 0.240854863631684 0.231116769335333 0.232522293652554 5 5 + 1543285 1543841 1543602.091 1541522 1544138 + gene protein_coding_gene TRUE TRUE AT5G05190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61670.1); similar to Os02g0464500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046806.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19834.1); similar to Os03g0334200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050029.1) 1.21700030319828 11.0241669651378 3.92680150997669e-07 2.36794276704446e-05 14.9479288625049 12.2688533387062 1.21700030319828 0.124840217470181 AT5G08120_at 6.46278502354388 6.60230091892797 7.50687421023638 7.25020249622542 7.59357009241939 7.1697162271904 6.55215978851366 6.21476299188282 5.63565657523575 5.53007952020952 7.32156227174426 7.40436658796155 6.8575937522834 6.98390278026116 7.11090740049945 7.22105195431382 6.8346485773371 6.61487384880898 5.92898232956392 0.184469263887339 0.179664957863644 0.180560704325444 0.188421347932887 0.184077782467463 0.188689184324 0.186060181605992 0.179687908791307 0.193113536543801 0.205136362394653 0.181836640151156 0.180907285247361 0.186937724746006 0.19045944250909 0.179664957863644 0.179664957863644 0.192067910441980 0.192944428393841 0.197560152588615 5 5 - 2600748 2601373 2601017.636 2600475 2602819 - gene protein_coding_gene TRUE TRUE AT5G08120.1 myosin heavy chain-related similar to MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16000.1); similar to microtubule-associated protein [Nicotiana benthamiana] (GB:ABB97536.1) 1.13373124872448 11.0200993016776 3.94102878206917e-07 2.37322138209403e-05 14.9447213000560 13.2899729044446 1.13373124872448 0.106514231978584 AT5G48640_at 5.71028330875146 5.92894957565223 6.66939352681574 7.20563786621937 7.62246251393692 7.15276205739902 6.30083984317822 5.86245669022446 5.16364528716317 4.73945069751157 6.25260260665886 6.23319472737538 6.44102564405478 6.62990250018496 6.62476779880077 6.62048068468432 6.68249144605344 6.312245099601 5.13128796466183 0.212516992837744 0.219483540923201 0.226848302047030 0.223817950089902 0.229647238368273 0.212516992837744 0.216041450133739 0.216690574689764 0.238956067828749 0.226678362236231 0.217774936591627 0.223060470785863 0.212516992837744 0.215392089068245 0.230188354689161 0.217943381544898 0.214842706480579 0.212900376332741 0.230599478142420 5 5 - 19740891 19741975 19741491.222 19740759 19742915 - gene protein_coding_gene TRUE TRUE AT5G48640.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48630.1); similar to G1/S-specific cyclin C-type (GB:P93411); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 1.33752956681117 11.0072784182584 3.98623965685988e-07 2.39225340556382e-05 14.9346022381078 12.2996232377083 1.33752956681117 0.149686905949727 AT5G41950_at 7.78995084814856 7.71511702337932 8.08360414975898 8.50241617116704 8.35656138702158 8.05334229431386 7.06076041816805 7.31337715539763 6.84968153815002 6.25614717035279 7.81809833536037 7.83333146595917 7.73601537924139 8.04240198324092 8.12314565297497 7.83215655280308 7.76914195611413 7.69762223014196 6.16185786166731 0.192024771547661 0.192316798326251 0.193944623713767 0.193771031890488 0.191801197851394 0.197696953785397 0.194643384418208 0.193151107468856 0.211586209643395 0.213848132552579 0.191801061073661 0.188764414026995 0.1967969991239 0.201003706990163 0.192219348297871 0.188764414026995 0.200314654057177 0.195359929396850 0.218075807897775 5 5|0 +|/ 16805622 16806304 16805855.125 16802942 16806742 + gene protein_coding_gene TRUE TRUE AT5G41950.1 binding similar to Os10g0518300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065074.1); similar to Os03g0113800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048738.1); similar to unknown [Vitis vinifera] (GB:AAP30737.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.10655332185738 11.0064482584456 3.98918646111812e-07 2.39225340556382e-05 14.9339465444084 14.9989168731875 1.10655332185738 0.100425493399749 AT5G43060_at 6.25580750306389 6.46565815880151 6.29490933578074 6.87791021150542 7.77209400707767 6.88218690433262 4.64668294806045 4.66660153516007 5.25198884390889 4.16830475373398 6.05614276498615 6.09004542393882 5.62346695347886 5.80424794621624 6.58173494271364 6.19670635670095 6.58134667194705 6.66534983641615 4.27744456658629 0.214137470004786 0.210318630935622 0.213442234867085 0.215469291076267 0.216797118012862 0.216075763166351 0.215956016691789 0.210318630935622 0.226777420633551 0.217745467168280 0.215817246886594 0.211903250494401 0.222058922385464 0.222032703416198 0.210318630935622 0.21538630541763 0.218154210712796 0.215535821646300 0.216976104560296 5 5|0 -|/ 17287033 17287769 17287381.5 17286735 17289392 - gene protein_coding_gene TRUE TRUE AT5G43060.1 cysteine proteinase, putative / thiol protease, putative similar to cysteine proteinase (RD21A) / thiol protease [Arabidopsis thaliana] (TAIR:AT1G47128.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60579.1); similar to cysteine protease [Hevea brasiliensis] (GB:ABG33750.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60580.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Granulin; (InterPro:IPR000118) 1.54102748452132 11.0039518215889 3.9980622977358e-07 2.39297541754263e-05 14.9319744070516 11.6156277422025 1.54102748452132 0.187687234883194 AT5G42850_at 8.31235061925658 8.32043619381986 9.30785807391674 9.1386376123801 9.54832493860976 9.18089252381623 8.44993889250697 8.36302457442902 7.52435192914575 7.28875461028188 8.34382268618456 8.65805290768795 8.3077296589996 8.70552578971743 8.07739216906409 8.49641208662798 8.85755427452847 8.3623218672765 7.42212030229231 0.204379401370254 0.193151097742307 0.210797514904883 0.209114074172039 0.195812011301272 0.198724943117877 0.194721683648371 0.204673857554162 0.228568070537194 0.207931673331415 0.201032878044543 0.195368199289065 0.196317314958233 0.198878024777346 0.199033364010084 0.192060480599937 0.204406944809900 0.213717936266108 0.199210972058164 5 5|0 -|/ 17199336 17199759 17199508.2 17198935 17199851 - gene protein_coding_gene TRUE TRUE AT5G42850.1|AT5G42850.2 electron carrier/ protein disulfide oxidoreductase similar to Thioredoxin-related [Medicago truncatula] (GB:ABE89853.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Protein of unknown function DUF953, thioredoxin-like; (InterPro:IPR010357); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.998424933307555 11.0030065072328 4.00142887192761e-07 2.39297541754263e-05 14.9312274893162 16.7716047838840 0.998424933307555 0.0716165393006183 AT5G14720_at 7.60363122793656 7.91918961721168 8.79913491828622 8.61550364862423 9.63697260456045 8.9437567398521 8.19815502428543 7.77445341186361 7.34157187036926 6.93215372309764 8.65687218455452 8.68480553781613 8.80711732647785 8.4795414570654 8.52337145063465 8.6593947005535 8.43661352824894 8.56689275202762 6.75721367440731 0.207406341998230 0.202706096664223 0.198251204238178 0.216425082515142 0.194810484853644 0.205531092884558 0.191245443401374 0.205922357112642 0.216048196433956 0.202875583406673 0.202674969099023 0.191114059685339 0.195253712314943 0.203157114304059 0.204046463661118 0.191114059685339 0.212695927326276 0.202947668995317 0.197356514204353 5 5|0 -|/ 4749412 4750362 4750011.222 4747863 4753595 - gene protein_coding_gene TRUE TRUE AT5G14720.1 protein kinase family protein similar to kinase [Arabidopsis thaliana] (TAIR:AT1G79640.1); similar to Os06g0486400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057665.1); similar to putative MAP4K alpha1 [Oryza sativa (japonica cultivar-group)] (GB:BAD19174.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.35824884269367 10.9889952260916 4.05169063880708e-07 2.41921711755082e-05 14.9201479457307 16.2424192523094 1.35824884269367 0.154141959431676 AT5G06680_at 3.18924819036615 3.30090961158568 3.73776698501842 3.57598944909713 4.58891882366575 4.60774169571324 3.35801430563368 3.2324354736997 3.14249264505551 2.75892397989521 4.13729219624024 3.97794157191525 4.13969600236753 4.02834328439255 3.39226360558055 4.03230025820973 4.33006076003644 3.85967502026583 3.15035118573531 0.238054594185782 0.230603905941097 0.234646888555245 0.23556191912063 0.232579531141663 0.238456291282993 0.230603905941097 0.236055523734456 0.240163849304203 0.241112099129765 0.232815246420830 0.235006352704049 0.238380666274301 0.237681686930897 0.244393213147775 0.238568604719835 0.243825976679914 0.246401132853472 0.245638320078521 5 5 + 2058669 2059339 2058987.545 2056588 2059748 + gene protein_coding_gene TRUE TRUE AT5G06680.1 SPC98 (SPINDLE POLE BODY COMPONENT 98) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. similar to tubulin family protein [Arabidopsis thaliana] (TAIR:AT5G17410.1); similar to Os09g0446200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063308.1); similar to Gamma-tubulin complex, DGRIP91/SPC98 component (ISS) [Ostreococcus tauri] (GB:CAL51771.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) 0.913696496766505 10.9876598889949 4.05651650758052e-07 2.41921711755082e-05 14.9190911489798 7.20110432898315 0.913696496766505 0.040497966708373 AT5G35370_at 5.14983064616692 5.58052696681017 5.98696329375952 6.51179807836899 7.16802701645054 7.277528016808 4.20838555587913 4.03645738974223 5.04686205763374 4.9895774928941 4.96264715003681 5.06662406447908 6.18015633325832 5.69393921499552 4.53040986821166 5.56260791541697 5.8774919929817 5.26408606811038 4.9016080614977 0.193086767006126 0.189320626565176 0.191980082116815 0.187066628714146 0.200863492058808 0.208325033472921 0.192707179619769 0.198615405624218 0.193512636150713 0.188269966281976 0.186468128905822 0.191674959971191 0.187271313794532 0.188470438088855 0.189168700878762 0.186468128905822 0.204196212835794 0.187705818657060 0.189632610110072 5 5 - 13605802 13606326 13606026.636 13605663 13608501 - gene protein_coding_gene TRUE TRUE AT5G35370.1 carbohydrate binding / kinase similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to Os02g0767400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048231.1); similar to D-mannose binding lectin family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99625.1); similar to Os09g0454900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063354.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.20258754181247 10.9853589558665 4.06484667717816e-07 2.41921711755082e-05 14.9172698172543 10.9257368854706 1.20258754181247 0.122673742692499 AT5G13520_at 2.91272537298035 2.99125243508877 3.79677360893669 3.51232497524859 3.03664853370858 3.26314734876071 2.57120929913928 2.72803418274709 2.76894586347393 3.3867881784311 4.33941248634937 5.32917425937497 3.95196150092498 4.10295394606775 5.16816084944456 4.61314044671186 4.66169649291486 4.77894461515727 3.55717661555026 0.219232351503482 0.212880106751145 0.220524002272304 0.212880106751145 0.221819790431286 0.217008284114803 0.224612256695826 0.223420560004231 0.221236257903823 0.220565640001123 0.234448122732625 0.229160814431894 0.219283765276567 0.213390120621515 0.224229997995247 0.216385730587422 0.227102631317799 0.220306826992170 0.221740071577734 5 5|0 -|/ 4342122 4343022 4342474.3 4341951 4344674 - gene protein_coding_gene TRUE TRUE AT5G13520.1 peptidase M1 family protein similar to APM1 (Aberrant peroxisome morphology 1) [Arabidopsis thaliana] (TAIR:AT4G33090.1); similar to leukotriene A-4 hydrolase (LTA-4 hydrolase) (LeukotrieneA(4) hydrolase) [Stigmatella aurantiaca DW4/3-1] (GB:ZP_01462436.1); similar to Os03g0819100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051710.1); contains InterPro domain Peptidase M1, membrane alanine aminopeptidase; (InterPro:IPR001930) 0.990980991487271 10.9837380545567 4.07072606041404e-07 2.41921711755082e-05 14.9159865037403 7.02942319979457 0.990980991487271 0.0698620803376085 AT5G41920_at 4.51973320317 4.60910748402494 4.95162225248132 4.44901234648526 5.11133059259622 5.24688913199357 3.72359660969454 3.74566132961627 4.15957995816771 4.43959712188627 6.08974197862590 5.88383032594552 5.38639889439569 5.7159645535702 5.6407375765638 5.60926547974305 4.91090236771497 5.22452275940924 4.0353001244025 0.221401741221562 0.217633212005741 0.222773349207903 0.211801933352501 0.212871662995737 0.214244278096716 0.230602309693476 0.217049086387734 0.222916724168141 0.210285284508206 0.214982751994365 0.213410041693136 0.210599336776810 0.216201259684667 0.222744363238199 0.209086064936182 0.219163467032155 0.211130521562653 0.216366381479854 5 5 + 16797837 16798402 16798080.909 16796977 16798473 + gene protein_coding_gene TRUE TRUE AT5G41920.1 scarecrow transcription factor family protein similar to SCR (SCARECROW), transcription factor [Arabidopsis thaliana] (TAIR:AT3G54220.1); similar to Os07g0567700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060023.1); similar to SCARECROW [Pinus sylvestris] (GB:ABH85406.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 1.06818350738661 10.9830546272770 4.07320777880625e-07 2.41921711755082e-05 14.9154453482657 9.42920056549853 1.06818350738661 0.0914847958857874 AT5G14710_at 6.65421863342789 6.70546718030996 7.3708896607924 7.2487482926175 8.46885508123876 7.9693245837859 6.86780533401531 6.45787338225089 5.5800319491722 5.4308282521295 7.16019720622707 7.14918640788026 6.73864764799618 6.82778245624863 6.52826025939792 7.25616846166743 7.11619538963932 6.5202824633933 6.0287828766338 0.236816824901108 0.221043554976828 0.221715391143398 0.232502924667963 0.225097986780144 0.222190069796916 0.230212806518579 0.232931404181224 0.223950409420208 0.235840341314216 0.223837541547134 0.226382836362517 0.227791298787729 0.232614972811058 0.230284701711278 0.229159828505959 0.234867054363703 0.229401206436013 0.22887249338317 5 5|0 +|/ 4746478 4747609 4746927.286 4746335 4747937 + gene protein_coding_gene TRUE TRUE AT5G14710.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79809.1) 1.16266114134269 10.9757172672058 4.09995567376473e-07 2.43021951214122e-05 14.9096329414116 13.5138832998222 1.16266114134269 0.114153112169559 AT5G32470_at 6.76630104830133 7.06593071624195 7.49708818386574 7.37521952104676 8.06198466643582 7.90534433211303 7.10627051698965 7.09266026174096 7.22907893052541 6.41538912170935 8.1949982129306 8.16970989706056 7.9215932511393 7.7944104322519 8.07208643722748 8.18098922592331 7.61466238590337 7.98375106605503 6.6359343160128 0.207603116055676 0.206811490753716 0.203412395905774 0.197078930455633 0.193975867270769 0.227580208938335 0.198033150917236 0.202584272401321 0.220218113531110 0.217632279454407 0.196553764067371 0.203544004498574 0.194554130104752 0.209522298789140 0.209496882794086 0.196651561962180 0.226419546076294 0.217304627189865 0.204124564521350 5 5|0 -|/ 12102566 12103116 12102762.111 12102129 12105829 - gene protein_coding_gene TRUE TRUE AT5G32470.1 similar to Os08g0566000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062539.1); similar to putative transcriptional regulator [Oryza sativa (japonica cultivar-group)] (GB:BAD10335.1); contains InterPro domain TENA/THI-4 protein; (InterPro:IPR004305) 0.966754765429563 10.9749011362216 4.10294260856995e-07 2.43021951214122e-05 14.9089861480644 14.7346795239972 0.966754765429563 0.062239884472006 AT5G53280_at 5.67864649999974 5.49086076979368 7.05814324962988 7.09246478286249 6.71132250351874 6.23691844965036 7.61588376965519 7.56282002814468 5.32467310801601 5.44084955217316 7.39869367855484 7.25446606824145 7.5401915245722 7.41308816164185 7.36961385134956 7.3298438992586 7.33173346189144 6.98603969505128 5.43862579438633 0.192417123565942 0.198669909129398 0.201019307433543 0.194938722309207 0.193570429764143 0.200200843529064 0.191759929561090 0.197590303414655 0.231300192643806 0.206519301627425 0.196034615660288 0.192639584816398 0.192667917776486 0.204463225114809 0.205628763133550 0.195299737449378 0.190567745618868 0.211486111417550 0.190567745618868 5 5|0 +|/ 21625057 21626150 21625798.9 21624733 21626644 + gene protein_coding_gene TRUE TRUE AT5G53280.1 PDV1 (PLASTID DIVISION1) An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site. similar to PDV2 (PLASTID DIVISION2) [Arabidopsis thaliana] (TAIR:AT2G16070.2); similar to Os06g0506000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057719.1); similar to Os01g0224200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042451.1); similar to Os02g0264300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046494.1) 1.05711772694768 10.9691911114141 4.12390685297293e-07 2.43930448905096e-05 14.9044593055376 13.0455533120378 1.05711772694768 0.088970365701821 AT5G59130_at 8.39380342022824 8.28187571400517 8.54927947086884 8.45198997562435 9.32698011965524 8.96043908893424 9.97688427071223 9.4543813655669 5.18578685645165 8.03804170474072 9.19966148937297 9.16996043567045 9.68985525709335 9.32097654029496 8.94927130885914 9.76585090009206 9.2547576746657 9.22341580741422 7.18966746769945 0.153776955897253 0.144533433657128 0.150324101490274 0.144316480709299 0.143241696735657 0.156500921411304 0.151285436485855 0.147274472337184 0.167044223155558 0.151406612678403 0.143241696735657 0.143241696735657 0.147434109270057 0.145856497413796 0.148044371751764 0.143241696735657 0.151053389146400 0.155653158293170 0.159160126774601 5 5 - 23887424 23888087 23887748.818 23887373 23890917 - gene protein_coding_gene TRUE TRUE AT5G59130.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.3); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 1.15632798576406 10.9478178398357 4.20341815770214e-07 2.48294830941374e-05 14.8874902289932 16.9875628546895 1.15632798576406 0.113394346813948 AT5G58800_at 7.96966047791817 7.9165242378463 9.03407830963812 9.15818192687922 9.3572704704411 8.88324953461298 8.14155861060718 8.08595536363029 7.57821423538889 8.00464374189975 8.75663209801289 8.70939877990243 8.47328898444788 8.80340197371756 8.71123132654222 9.17914563298208 8.96758913705644 8.46149446229122 7.67347651316838 0.145146022210670 0.142707486449788 0.148834806287731 0.142707486449788 0.143154253791341 0.147461177846876 0.146049692956006 0.146424872409839 0.173246418302755 0.149984182665677 0.143624440717384 0.145388619054597 0.150413953895579 0.161963081505909 0.148451672229487 0.143379207366213 0.148791342033336 0.145259543903286 0.153289831286570 5 5 - 23763259 23763813 23763604.727 23763109 23764500 - gene protein_coding_gene TRUE TRUE AT5G58800.1|AT5G58800.2 quinone reductase family protein|FMN binding / oxidoreductase similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to putative quinone oxidoreductase [Cicer arietinum] (GB:CAD31838.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 1.04271584522123 10.9425155121639 4.22340044665764e-07 2.49135757604506e-05 14.8832744863732 16.8232520145407 1.04271584522123 0.0858345439296549 AT5G47580_at 7.42337463645275 7.19200424529795 7.63524064217065 7.64323262167109 7.6574790094992 7.57504779740359 5.44648482677202 5.28258228524536 5.08224300560062 4.90537112500452 5.79574935194863 5.79482545872617 5.56380535247563 5.88801439455602 5.75368435781305 5.76149022794996 6.03937662228915 5.8765015168964 5.71504098573663 0.17982055802365 0.181013555400768 0.191856266354067 0.179846668417684 0.179403450065321 0.193690954715056 0.182044516832146 0.180500690363694 0.188646277241885 0.186195014447190 0.185828515462364 0.18139695296801 0.180478471192182 0.179410038535889 0.182021524916222 0.185602906284252 0.178446859907845 0.185827985232462 0.185713718137304 5 5 - 19312189 19312747 19312483.545 19312072 19314644 - gene protein_coding_gene TRUE TRUE AT5G47580.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17250.1); similar to At5g47580/MNJ7_17 [Medicago truncatula] (GB:ABE80901.1); similar to hypothetical protein 40.t00008 [Brassica oleracea] (GB:ABD65133.1); similar to Villin headpiece [Medicago truncatula] (GB:ABE80900.1) 0.933300528731035 10.9363002222208 4.24695486114577e-07 2.50184830296663e-05 14.8783298214618 12.5036303992870 0.933300528731035 0.0511185659940839 AT5G47780_at 9.20375143417972 9.24489489335842 10.0497863395427 10.0181797026399 10.3663392974937 10.2270751656414 9.3619217662352 9.25854580208567 9.27849473604439 9.35480849584955 10.6257926408226 10.3086839216470 10.2313347188087 10.1924517437896 10.4571343907309 10.0317173163539 9.87496758602357 10.2708143227747 9.4537399110126 0.117225488109718 0.112028373014708 0.110116049669141 0.113594656957631 0.114212071350731 0.113514682572543 0.110595050384126 0.113825854606036 0.139737988358122 0.12254346505373 0.112300271713867 0.113928889131738 0.115853773681446 0.121503658696846 0.122322194444503 0.108262936097279 0.122002781677385 0.118471659517760 0.115630920539195 5 5 + 19367064 19367606 19367337.091 19365145 19367895 + gene protein_coding_gene TRUE TRUE AT5G47780.1 GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups Encodes a protein with putative galacturonosyltransferase activity. similar to GAUT1/LGT1 (Galacturonosyltransferase 1), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G61130.1); similar to glycosyl transferase-like protein [Triticum aestivum] (GB:CAJ19325.1); similar to glycosyl transferase-like protein [Brachypodium sylvaticum] (GB:CAJ26362.1); similar to NUDIX hydrolase; Glycosyl transferase, family 8 [Medicago truncatula] (GB:ABE87702.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 0.892415509090692 10.9303264617112 4.26972856527617e-07 2.51185127474775e-05 14.8735742043076 19.5220416973576 0.892415509090692 0.0313285595589157 AT5G65310_at 9.6160962467865 9.8191466525153 9.07465529705665 9.38588983420864 10.6036524677049 10.0734332941518 8.3616143519359 8.48267025821631 8.70188478103763 8.34967370090977 10.3885074903034 10.8109551450987 10.5160662825894 10.0429381762131 10.4704367728789 10.4357180431157 9.84685741228297 10.2619186352211 9.20244243916775 0.157846521902787 0.157623027990438 0.154209976630501 0.156109895211820 0.156644791030413 0.159810336209298 0.170938110622827 0.165784142769138 0.173271613967482 0.171018321387932 0.159585580488515 0.153494367777469 0.153520070625134 0.157079835853834 0.157221498854067 0.153329230947012 0.170032230376206 0.157536817810183 0.164197327149624 5 5|0 -|/ 26119692 26120768 26120112.8 26119165 26121840 - gene protein_coding_gene TRUE TRUE AT5G65310.1|AT5G65310.2 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); transcription factor|ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) encodes a class I HDZip (homeodomain-leucine zipper) protein Identical to Homeobox-leucine zipper protein ATHB-5 (Homeodomain transcription factor ATHB-5) (HD-ZIP protein ATHB-5) (ATHB-5) [Arabidopsis Thaliana] (GB:P46667); similar to ATHB6 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 6), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22430.1); similar to homeodomain-leucine zipper protein [Brassica napus] (GB:AAR04932.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047)|Identical to Homeobox-leucine zipper protein ATHB-5 (Homeodomain transcription factor ATHB-5) (HD-ZIP protein ATHB-5) (ATHB-5) [Arabidopsis Thaliana] (GB:P46667); similar to ATHB6 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 6), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22430.1); similar to homeodomain leucine zipper protein HDZ1 [Phaseolus vulgaris] (GB:AAK84885.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) 1.15493347512910 10.9095742890620 4.34987919835025e-07 2.55553584409088e-05 14.8570300436665 18.9761489928643 1.15493347512910 0.113990794259645 AT5G42820_at 7.6142073787266 7.7268324980149 8.27931212113767 8.1222792324465 8.68032920565345 8.40352180026224 7.32655264588704 7.2111749092509 6.77073542436471 6.96597425366998 8.1040728925659 7.8760071761148 8.07240459432887 8.0075182909811 7.90475294986912 8.08625724912827 7.74974946119256 7.71073678431091 7.030255469012 0.159152900291404 0.155945518851868 0.152888757958459 0.149425553085192 0.157056812276005 0.160521510262457 0.151762532535686 0.150302294764480 0.160883100113570 0.170894311749926 0.157363199733378 0.153548960726658 0.152861286276826 0.158112204165021 0.147714754715044 0.152832082374265 0.153896751408537 0.154642407082014 0.160966176651467 5 5 - 17187743 17188203 17187978.545 17186511 17188932 - gene protein_coding_gene TRUE TRUE AT5G42820.1|AT5G42820.2 ATU2AF35B; RNA binding U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. similar to ATU2AF35A, RNA binding [Arabidopsis thaliana] (TAIR:AT1G27650.1); similar to RNA-binding re (GB:ABE79661.1); contains InterPro domain U2 auxiliary factor small subunit; (InterPro:IPR009145); contains InterPro domain RNA recognition, region 1; (InterPro:IPR003954); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.959142220517158 10.9049873450627 4.36781503318132e-07 2.56260071338204e-05 14.8533682455077 15.3511557941692 0.959142220517158 0.061739081256429 AT5G59840_at 5.59056779573099 5.56409487364991 6.55326716877802 6.59710323918397 6.2023789375652 6.5421674779398 4.88595062522563 5.26672897181417 5.60221537070958 5.9533703932738 6.94105543745168 6.82656399343705 6.67139256710235 6.7369503936284 6.97259490661182 6.79440239937083 6.42197116223022 6.30237169203636 5.71134388398733 0.172769995617004 0.176487155945795 0.173922910189668 0.182579532911086 0.178743065187077 0.180263950446837 0.182904082255398 0.183190996463137 0.193563624383920 0.190956115464951 0.174321181020316 0.175841917502003 0.172412990017591 0.175389795993785 0.173739979583550 0.175187119620768 0.181594415523815 0.176207360426618 0.185195005028193 5 5|0 -|/ 24124690 24125951 24125188.667 24124441 24126477 - gene protein_coding_gene TRUE TRUE AT5G59840.1 Ras-related GTP-binding family protein similar to ARA3 [Arabidopsis thaliana] (TAIR:AT3G46060.2); similar to Sigma-54 factor, interaction re (GB:ABE82101.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.04983162112746 10.9018666061794 4.38006366394148e-07 2.56631431010948e-05 14.8508759021829 12.1323104037229 1.04983162112746 0.0887604807167836 AT5G45800_at 9.60275292595063 9.85521562480484 11.2767732920583 11.5451479812035 10.3529539136564 10.2780446241241 9.46457145639613 9.64228182532242 8.74649794773928 8.73887221788068 8.94233222190293 9.48332199403839 9.35574788486072 9.4131717333656 9.59811466972031 10.0576915136889 9.72447003663892 9.6733631825129 8.8415484337892 0.0830041127130807 0.0819027750849399 0.086605788222356 0.0824434432492447 0.082120975242485 0.091827119571901 0.0816520449771288 0.0816520449771288 0.0963885787174563 0.0972119827357427 0.0860636533193421 0.0816520449771288 0.0894148681435105 0.0866091316185826 0.0817848308786216 0.0831594940246172 0.0926302373441201 0.0867251234465546 0.0935630558429525 5 5 - 18593019 18593552 18593293.455 18592763 18596334 - gene protein_coding_gene TRUE TRUE AT5G45800.1 MEE62 (maternal effect embryo arrest 62); ATP binding / protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G24230.1); similar to Protein kinase; Ribosomal protein S2 [Medicago truncatula] (GB:ABE80251.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.988705808048389 10.8832372195365 4.45396347099214e-07 2.60609105306784e-05 14.8359803837872 19.4055507993033 0.988705808048389 0.0719696803409918 AT5G67490_at 8.99101437479831 9.06909154907815 9.62832999148237 9.861152741102 9.72027798794025 9.89960465512839 7.83518960880354 8.41409245752212 8.87039569068448 8.04475749823067 9.78633576583284 9.27821714805607 9.27138647686003 9.62163842716865 9.633039136387 9.28992558100189 9.22502873397346 9.47102077584997 8.13945589065646 0.113745444878031 0.115653035721387 0.113416845778592 0.115597617733235 0.115495964404821 0.117169272489858 0.129579611701942 0.118821570590085 0.127116719076579 0.122331296675996 0.113945643556238 0.112946824214349 0.111972420132609 0.114769602637492 0.115665327360407 0.112148807864427 0.115682400146258 0.114826434536339 0.117158342963409 5 5 - 26951597 26951886 26951747.545 26951379 26952178 - gene protein_coding_gene TRUE TRUE AT5G67490.1 similar to Os06g0157800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056861.1); similar to W02D3.12 [Caenorhabditis elegans] (GB:NP_740875.1); contains InterPro domain Protein of unknown function DUF1674; (InterPro:IPR012875) 1.14776599607338 10.8765039436252 4.48100580608630e-07 2.61838041419034e-05 14.8305893227472 18.0766493534811 1.14776599607338 0.113160951430311 AT5G02470_at 4.31707125601581 4.52971390369959 6.27567304952794 6.029242741059 6.17549692855164 5.43370253788523 4.98090246863141 3.83220012448867 3.58393650728686 3.92143537842998 5.69592433765423 6.09457073131084 5.63828310246899 5.54260512660567 5.80688540168376 5.9534642424233 6.2929724878302 5.7556396740015 3.68242507095162 0.262661822631414 0.2658458420947 0.270508153677679 0.272218152042885 0.266987694824821 0.27372168934306 0.268072948657137 0.277417528700529 0.284254417004911 0.275739940639484 0.261492787252223 0.261950000589792 0.267365073514233 0.270848950801517 0.27121951682253 0.263642594046234 0.279208414738171 0.275091152550646 0.272840354228162 5 5|0 -|/ 542561 543576 542850.4 542356 544898 - gene protein_coding_gene TRUE TRUE AT5G02470.1|AT5G02470.2|AT5G02470.3 DPA; transcription factor core cell cycle genes similar to DPB [Arabidopsis thaliana] (TAIR:AT5G03415.1); similar to transcription factor DP1 [Populus tremula x Populus tremuloides] (GB:AAQ13675.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.84091718091078 10.8735610039617 4.49288130496146e-07 2.61883909496152e-05 14.8282318067245 9.98515477134248 1.84091718091078 0.243246215707471 AT5G01720_at 5.16095742953092 5.1882239482585 5.72892716768187 5.87700665272612 5.38063616178176 5.46599938276691 4.5953195018688 4.22214463790977 4.24170552969066 4.46661958410077 5.5019503281338 5.79129714672031 4.89519958225425 5.55403528969173 5.67560859587987 5.84360826630566 5.64448388795129 4.86283492991927 4.25903023309815 0.188820494354571 0.187234404466301 0.186040437275228 0.197097227590137 0.189975954012257 0.198544626587831 0.193705382350324 0.190684048643364 0.193861722284921 0.185631089324892 0.201277694865646 0.189727073157879 0.195581212855658 0.189555845599363 0.184903183722065 0.185770293854505 0.193095158121426 0.188402003000212 0.191353993701461 5 5 - 267334 267908 267674.545 266720 270480 - gene protein_coding_gene TRUE TRUE AT5G01720.1 F-box family protein (FBL3) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G27920.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91133.1); similar to Os12g0108500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065951.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.98507821645383 10.8712101381688 4.50239221371231e-07 2.61883909496152e-05 14.8263480513977 10.0991913781424 0.98507821645383 0.0711878308542656 AT5G58560_at 6.41577860174373 6.74606553645245 7.42623249718481 7.25217062453456 7.79699378342965 7.37746577768169 6.9228792801325 6.89262021436609 6.39210040199371 6.03319636735576 7.74160613793363 7.5337156903652 7.30520590182695 7.4990912180462 7.83886874917807 7.52614028851953 7.39930601768925 7.73992146538004 5.96832465026759 0.178968829793983 0.167779244305480 0.183640814381057 0.176540769643407 0.175414580377261 0.172761714233235 0.176460135724516 0.171816011100320 0.171831273070725 0.177767659532579 0.166874045451323 0.166847381668509 0.174142886760795 0.168717033909879 0.17694366047972 0.166242030718198 0.191017782333934 0.175651571164133 0.179029882495524 5 5|0 +|/ 23688894 23689737 23689409.5 23687621 23690103 + gene protein_coding_gene TRUE TRUE AT5G58560.1 phosphatidate cytidylyltransferase family protein Identical to Probable phytol kinase 2, chloroplast precursor (EC 2.7.-.-) [Arabidopsis Thaliana] (GB:Q67ZM7;GB:Q67ZA1;GB:Q8LAW9;GB:Q9LV00); similar to VTE5 (VITAMIN E PATHWAY GENE5), phosphatidate cytidylyltransferase/ phytol kinase [Arabidopsis thaliana] (TAIR:AT5G04490.1); similar to Probable phytol kinase 3, chloroplast precursor (GB:Q2N2K0); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) 1.08032727813949 10.8708394401697 4.50389394463399e-07 2.61883909496152e-05 14.8260509666734 13.9558703261855 1.08032727813949 0.0973278804520631 AT5G15440_at 7.43491812043778 7.40368327690163 8.46089389497036 8.49062676200356 9.05676712279555 8.53340602544569 8.14422710911362 8.01089134180785 7.79053518068279 7.5972361924985 9.07582805598924 9.27590449107506 8.88094926234386 9.13646434351976 8.98456707051986 8.96939483873831 8.58449816645226 8.7845953360758 7.76211629008502 0.181838985892580 0.179857675942328 0.182606365754328 0.189584291684670 0.17688164801772 0.186550920582758 0.180190163028239 0.176292230245477 0.203353528355248 0.192437879288317 0.179981416180563 0.170668418856222 0.177173057415995 0.177712077956866 0.170668418856222 0.171026777218126 0.173888442276027 0.180590214382595 0.188700378111113 5 5 + 5013467 5014098 5013716 5012064 5014284 + gene protein_coding_gene TRUE TRUE AT5G15440.1 circadian clock coupling factor-related similar to circadian clock coupling factor-related [Arabidopsis thaliana] (TAIR:AT5G39360.1); similar to Os07g0598200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060180.1); similar to Os03g0427000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050411.1); similar to circadian clock coupling factor ZGT [Nicotiana tabacum] (GB:AAK56924.1); contains domain no description (G3D.1.20.58.140); contains domain F-box domain (SSF81383) 1.06594473186954 10.8688511115312 4.51195813932402e-07 2.61883909496152e-05 14.8244572789549 16.5310039150235 1.06594473186954 0.0937606469619884 AT5G12370_at 7.67186573686866 7.87499802767017 8.12608179541909 8.15907790890069 8.36711328352077 8.31712220706972 7.04886884548087 7.21856375501157 7.53985202047849 7.38643993170615 8.87169517711868 8.70481505155496 8.557430075846 8.52462980680569 8.35364601647313 8.4566851445913 8.2208004025599 8.41597900119941 7.47357973248526 0.139117113954823 0.133384473904935 0.144327539311742 0.133589643602229 0.135139535890525 0.140544075223791 0.142436209088088 0.145677164432207 0.148251418861385 0.138505673377946 0.132783974905847 0.135427068022563 0.137714435882341 0.147373879838838 0.147859149323861 0.133123525581061 0.137492270951243 0.143440603796058 0.136436563340952 5 5|0 -|/ 4003017 4004674 4003917.6 4002776 4008805 - gene protein_coding_gene TRUE TRUE AT5G12370.1|AT5G12370.2|AT5G12370.3 SEC10 (EXOCYST COMPLEX COMPONENT SEC10) Identical to Exocyst complex component 5 (Exocyst complex component Sec10) (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q94CK5); similar to Os12g0238100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066469.1); similar to Exocyst complex component Sec10, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21938.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE92636.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976); contains InterPro domain t-snare; (InterPro:IPR010989)|Identical to Exocyst complex component 5 (Exocyst complex component Sec10) (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q94CK5); similar to Os12g0238100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066469.1); similar to Exocyst complex component Sec10, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21938.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE92636.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976) 0.917680448549209 10.8688428883987 4.51199152298846e-07 2.61883909496152e-05 14.824450687233 15.837878434697 0.917680448549209 0.0469635226033211 AT5G59350_at 6.90040315282368 7.47912732069422 8.50057610411082 8.5873146514278 8.83998231816904 8.73633787567926 8.628936406749 8.7987113803242 6.61019067817036 7.17626760606611 8.51535872527908 8.4408041680939 8.6111504394835 8.45013367299652 8.2406100926784 8.4493953051156 8.4991945310299 7.85399351625643 6.78861079613964 0.176548425326466 0.163544948061744 0.173185069711468 0.169417204844900 0.170913372240797 0.170654965357330 0.165096259694198 0.170862092190937 0.209425651290447 0.182717089330921 0.164223395067253 0.163544948061744 0.166712120720132 0.177491870681138 0.166854501808278 0.164138659449655 0.177337071911092 0.181029769783261 0.176947229234216 5 5 + 23958710 23958969 23958863.636 23958008 23959439 + gene protein_coding_gene TRUE TRUE AT5G59350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39560.1); similar to hypothetical protein MtrDRAFT_AC146757g30v1 [Medicago truncatula] (GB:ABE90639.1) 1.11924093422012 10.8608103270741 4.54473009386293e-07 2.63431461069026e-05 14.8180089491559 15.9293918594933 1.11924093422012 0.106959955598964 AT5G23450_at 8.2390313132696 8.34579044831098 9.08326411256721 9.12987151036897 9.29643445148323 9.12935465009203 8.31237917518103 8.23756153489696 8.60144364482137 8.33507271425506 9.52475994221325 9.4255030459 9.40428011867463 9.57837315188991 9.16252710222756 9.44019333426404 9.18355103715279 9.28716319137007 8.43681176790551 0.105487075058166 0.0892148187461527 0.0971673692908807 0.0975168807114321 0.094095196499976 0.0929544170921218 0.0978316317075218 0.093062559141041 0.096781119985085 0.0973890176292365 0.0895628464034692 0.090367643936421 0.0919426767003234 0.0892148187461527 0.0987281493642988 0.0925126459478867 0.0963307415316323 0.0932824725313214 0.094257119337286 5 5 - 7905045 7905752 7905462.182 7904711 7909588 - gene protein_coding_gene TRUE TRUE AT5G23450.1|AT5G23450.2|AT5G23450.3 ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1); diacylglycerol kinase Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine. similar to diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.2); similar to Os10g0516800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065066.1); similar to sphingosine kinase [Lotus japonicus] (GB:BAD86587.1); similar to Os04g0541500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053445.1); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) 0.897029193173719 10.8557061985866 4.56566725148915e-07 2.64291734621848e-05 14.8139127900268 17.6384958534157 0.897029193173719 0.0375505100947103 AT5G64770_at 10.5076722553861 10.3949525422964 11.1169146568229 11.2048964172513 11.5128334301071 11.5323587126000 10.8785029777074 11.1978642116526 10.3305720847429 10.9616843566370 12.2941410091625 12.3446921863440 12.3020155238391 12.1392659317901 12.147400692122 12.3247620329523 12.1771025796300 12.0833122053107 11.4691781063432 0.138865811866260 0.137836154436725 0.143135673722135 0.137688050066228 0.133621762074013 0.142565120991305 0.131445218521395 0.133484396011987 0.141312635473833 0.128910213677229 0.127921880302230 0.127853688560775 0.129295854275359 0.130534517225055 0.132077698413786 0.128819727314436 0.128763506447600 0.132820162320290 0.130342914256160 5 5|0 -|/ 25914907 25915287 25915034 25914593 25915350 - gene protein_coding_gene TRUE TRUE AT5G64770.1 similar to 80C09_10 [Brassica rapa subsp. pekinensis] (GB:AAZ41821.1) 0.951555572502083 10.8542024311382 4.57185568719146e-07 2.64297096564582e-05 14.8127055602331 22.6167817518371 0.951555572502083 0.0606480330030445 AT5G41960_at 7.21799938953225 7.33375972478435 8.21855647709376 8.26996218478928 8.41132939983467 7.92996143901005 6.8109082708398 6.99346789227255 5.50035680618651 6.39290972752147 7.02623820079878 6.79904961378799 7.24960356330363 7.09599174834617 6.93008220888386 7.47368571319626 7.3055240933335 6.81203256142572 6.38896405621498 0.213897711940087 0.202820487353209 0.217266502680558 0.212520391122534 0.212984927269296 0.219004962204526 0.203012662698791 0.201800630979058 0.2266652771139 0.215843525240291 0.202545746349260 0.205053236363897 0.204564375413494 0.212465389509288 0.201808512480821 0.204375638039337 0.208285202900695 0.218881421556242 0.215515441017203 5 5|0 +|/ 16807099 16807887 16807423 16806942 16808270 + gene protein_coding_gene TRUE TRUE AT5G41960.1 similar to Os04g0585600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053679.1); similar to H0307D04.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66859.1) 1.05543382770077 10.8414654118217 4.62463930260039e-07 2.66992505650385e-05 14.8024724146536 14.2385445103657 1.05543382770077 0.091749354384451 AT5G49060_at 3.53870382093056 3.93134250111614 4.59599631510735 4.90833030491442 5.25082720589090 4.96182587834655 3.66768545613577 3.59308228208762 3.44166272192598 2.99667470457241 4.06288595063514 4.33925513339078 4.33384809950262 4.30237486017147 4.29997744893715 3.9746738916865 4.19075525506043 3.7989494090405 3.23689312728013 0.277907514997290 0.272009147035605 0.285260575123083 0.285266244262484 0.282006406243597 0.287033234345209 0.280643567502895 0.274917819562133 0.293310276000198 0.281757656543663 0.278048979506514 0.272009147035605 0.272773528320379 0.273852233512744 0.280174040845232 0.272009147035605 0.301164695937367 0.280052691487559 0.278509245526617 5 5 + 19904616 19904997 19904835.818 19903724 19905689 + gene protein_coding_gene TRUE TRUE AT5G49060.1 DNAJ heat shock N-terminal domain-containing protein Identical to Chaperone protein dnaJ 49 (AtJ49) (AtDjC49) (ATJ49) [Arabidopsis Thaliana] (GB:Q9FH28;GB:Q67XE5); similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57340.2); similar to Os05g0364500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055322.1); similar to dnaJ-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89081.1); similar to Os01g0556400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043324.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.09215228289542 10.8386842352756 4.63625268254562e-07 2.67245612836378e-05 14.8002361059566 7.99993264922245 1.09215228289542 0.101026736039124 AT5G26880_at 9.4662717852493 9.38052784085187 10.1954373461427 10.1314838777615 10.5354591074572 10.1664919271085 8.9252636675643 8.87573396456594 8.62606601139203 8.78250263218935 9.49047630841929 9.28916233164324 9.56862287595277 9.56958925418458 9.60236753937003 9.29582695090486 9.76241084658303 9.41670108128642 8.56175552063685 0.108277990551473 0.105671344259629 0.111243190774678 0.106851467225743 0.106184865847069 0.115508338452302 0.10609565915789 0.104763478764116 0.120846086491754 0.106212018084018 0.108200205297042 0.108302586045282 0.105349300181822 0.107415641940412 0.104763478764116 0.108391091272101 0.117065285797742 0.109743946859844 0.115243526099653 5 5|0 -|/ 9457998 9458924 9458295.75 9457700 9459233 - gene protein_coding_gene TRUE TRUE AT5G26880.1 tRNA/rRNA methyltransferase (SpoU) family protein similar to Os08g0506500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062189.1); similar to tRNA/rRNA methyltransferase (SpoU) family protein (ISS) [Ostreococcus tauri] (GB:CAL55185.1); contains InterPro domain tRNA/rRNA methyltransferase, SpoU; (InterPro:IPR001537) 0.968944338598279 10.8374656653909 4.64135105669958e-07 2.67245612836378e-05 14.7992560589189 18.7876683745622 0.968944338598279 0.067030941246031 AT5G54750_at 8.66358968928503 8.65979904609905 9.23044792266488 9.24006700722203 9.03892962900263 9.3469163005611 8.16764271967087 8.35515494959625 7.56554159555083 8.02961585497805 9.18346514465618 9.32329948937618 8.95612957310911 9.23405072740003 9.31532587762402 8.96360123271091 8.82436838964535 8.90738718757448 8.19786957709454 0.128751454683238 0.126872928270997 0.134008246405806 0.122909078611486 0.127401098830203 0.135578872274891 0.141292129660738 0.138488809705023 0.182347169879598 0.141488256684066 0.128092051132469 0.127778625331101 0.122909078611486 0.125817022655097 0.128681786623429 0.136142997846768 0.126548812393134 0.135977062081003 0.136008768040448 5 5 + 22259320 22260604 22260110.182 22258707 22260947 + gene protein_coding_gene TRUE TRUE AT5G54750.1 transport protein particle (TRAPP) component Bet3, putative similar to hypothetical protein LOC445207 [Danio rerio] (GB:NP_001003601.1); similar to Os03g0402000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050321.1); contains InterPro domain Transport protein particle (TRAPP) component, Bet3; (InterPro:IPR007194) 0.95499402862704 10.8352874676600 4.65047960450628e-07 2.67300069566897e-05 14.7975039019583 17.3475496389977 0.95499402862704 0.0624253826020425 AT5G45110_at 8.29243827066894 8.78308290424984 9.7414061079501 9.93346414969534 8.84612825297547 8.54341858505074 6.83027497379657 7.03348630586259 7.39953743649323 7.08965344076022 8.17317533749845 8.1204572746174 7.90401502902024 7.9224644202194 7.25489469595374 8.02558401574414 7.92870034121429 7.93533409820822 7.02870979296667 0.197886454619436 0.185332404728583 0.185332404728583 0.190973422481931 0.192489694835744 0.197604313308292 0.196888692813829 0.200548060249717 0.203619652639377 0.205755215567448 0.197817580541689 0.188934339047039 0.190502534386424 0.193200824449928 0.191709588393369 0.185332404728583 0.186364464109257 0.198840832381162 0.191913200952393 5 5|0 +|/ 18247833 18248534 18248166.111 18246137 18248749 + gene protein_coding_gene TRUE TRUE AT5G45110.1 NPR3 (NPR1-LIKE PROTEIN 3); protein binding Encodes a parolog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. similar to NPR4 (NPR1-LIKE PROTEIN 4), protein binding [Arabidopsis thaliana] (TAIR:AT4G19660.1); similar to ankyrin repeat BTB/POZ domain-containing protein [Populus trichocarpa] (GB:ABF48718.1); similar to NPR-1 [Pyrus pyrifolia] (GB:ABK62792.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 1.13336412754644 10.8342993850071 4.65462696405518e-07 2.67300069566897e-05 14.7967089464287 16.0408182979310 1.13336412754644 0.110882868221297 AT5G07840_at 6.86435248595927 7.1338307957732 7.69206566373715 7.75243114386814 8.39599957882481 8.14136173444748 6.79541629544802 6.70180314906427 7.18758490236915 6.66912973681044 7.64127685159638 7.77581287013265 7.89028135328683 7.6347904744389 7.2464353059277 8.0464150510322 7.79477092346048 7.68451478046574 6.84436091181266 0.187543910579310 0.173799817934376 0.184184215350484 0.18687410789655 0.183340743193021 0.183174296838960 0.177754717771524 0.176727238770905 0.182226673128508 0.179195167611305 0.174044049609034 0.175410770124215 0.176375174452403 0.182333466829177 0.177513066953176 0.174772413796473 0.175738160796014 0.173188363492019 0.174864092808869 5 5 - 2506769 2507264 2507062.364 2506657 2508374 - gene protein_coding_gene TRUE TRUE AT5G07840.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G61230.1); similar to Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats (GB:1N0R); similar to ankyrin 2,3/unc44 [Aedes aegypti] (GB:EAT33004.1); similar to Os02g0102600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045598.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.967771266476702 10.8256149749538 4.6912521537131e-07 2.69046981327774e-05 14.7897183290850 14.7419804650353 0.967771266476702 0.0669939293267946 AT5G63570_at 8.31790390968559 8.4274085527038 9.08036016059383 9.01950173818886 8.67031449973689 8.6301125381536 8.35965709927514 8.49277390044108 8.12782281711335 8.23025104707939 9.34413996105221 9.81760083636271 9.16859216921942 9.27135036462593 10.2976865594801 9.17510279786869 9.1140408921107 9.22665883239664 7.96431179191255 0.165339521226392 0.152268079386769 0.154888697427137 0.150503515170098 0.150052925820369 0.153654276835514 0.153994008332235 0.160503487679804 0.173856835915845 0.162742874319226 0.150288930213457 0.152978878154631 0.1523193235836 0.153817672042875 0.152964312842428 0.151747412021867 0.158583352735883 0.154694241842508 0.160483230955500 5 5|0 +|/ 25470204 25470811 25470564.4 25469101 25471067 + gene protein_coding_gene TRUE TRUE AT5G63570.1 GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE); glutamate-1-semialdehyde 2,1-aminomutase Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced. Identical to Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplast precursor (EC 5.4.3.8) (GSA 1) (Glutamate-1-semialdehyde aminotransferase 1) (GSA-AT 1) (GSA1) [Arabidopsis Thaliana] (GB:P42799); similar to GSA2 (GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2), glutamate-1-semialdehyde 2,1-aminomutase [Arabidopsis thaliana] (TAIR:AT3G48730.1); similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (GB:Q85WB7); similar to glutamate-1-semialdehyde aminotransferase (GB:AAA79123.1); similar to glutamate 1-semialdehyde aminotransferase [Brassica napus] (GB:AAO63783.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814); contains InterPro domain Glutamate-1-semialdehyde-2,1-aminomutase; (InterPro:IPR004639) 0.88503551745651 10.8192062848982 4.71848065788904e-07 2.70251082368451e-05 14.7845553947942 17.3919332683513 0.88503551745651 0.0323900339615474 AT5G23850_at 5.76457169065854 5.89562950628226 6.4938473664453 6.33334916992744 5.42044879033852 5.74595116508042 3.42089406870353 3.18429180606123 3.96971979688531 3.86120226085491 4.44648097817717 4.8399963844291 4.20106850769513 4.31194488752466 4.59162060194021 4.46210949757641 4.26153719183502 4.65147796405399 3.85585006837746 0.251300009128818 0.256165319222785 0.26226967073828 0.25504467564614 0.252163846111170 0.256141236227452 0.251562729377511 0.247659705832522 0.254468869483239 0.246517696253474 0.251350736570760 0.246517696253474 0.249462699138101 0.246517696253474 0.246517696253474 0.249981266861941 0.246560861488037 0.247049331764207 0.2513527522517 5 5 + 8040068 8040629 8040362.909 8038055 8040941 + gene protein_coding_gene TRUE TRUE AT5G23850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48980.1); similar to OSIGBa0159I10.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67462.1); similar to Os02g0642700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047557.1); similar to Lipopolysaccharide-modifying protein [Medicago truncatula] (GB:ABD33425.1); contains InterPro domain Lipopolysaccharide-modifying protein; (InterPro:IPR006598); contains InterPro domain Protein of unknown function DUF821, CAP10-like; (InterPro:IPR008539) 1.0036205739848 10.8132531169424 4.74392771968115e-07 2.71350108817285e-05 14.7797562492546 9.46555805061708 1.0036205739848 0.0783286489214411 AT5G51070_at 10.0719881674632 10.0669746706215 11.4488865742451 11.4232242096063 11.1060799471409 10.8579507933725 10.0127697881702 10.1327842397438 9.39413482086244 9.87015305052228 10.5762104715410 9.83457406813753 10.5321715537500 10.4647289693594 9.51389470752422 10.7457111486571 10.3403870006649 10.1268862906020 9.4671326625104 0.109516255795509 0.104781965596595 0.106194431334331 0.104925838486133 0.104781965596595 0.113240394741537 0.112160017951506 0.105942915147723 0.129954156891391 0.107502059856798 0.106749247926359 0.104781965596595 0.104781965596595 0.110586792951215 0.110119515765497 0.106707502582040 0.111664918480160 0.111134414723044 0.107839723057252 5 5 + 20784830 20785657 20785329.636 20781541 20785907 + gene protein_coding_gene TRUE TRUE AT5G51070.1 ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase ATP-dependent Clp protease regulatory subunit Identical to ERD1 protein, chloroplast precursor (ERD1) [Arabidopsis Thaliana] (GB:P42762); similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to ATCLPC (CASEINOLYTIC PROTEASE C), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G48870.1); similar to ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa (indica cultivar-group)] (GB:AAN78327.1); similar to H0502B11.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66527.1); similar to ATP-dependent Clp protease regulatory subunit [Thermosynechococcus elongatus BP-1] (GB:NP_681098.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Clp, N terminal; (InterPro:IPR004176); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.913793256453021 10.7970424230107 4.81398012911654e-07 2.74994279595051e-05 14.7666724238225 20.5620626509177 0.913793256453021 0.0479130949645153 AT5G55450_at 10.2404566451032 10.4582575029078 11.0290256606157 11.0548455986866 8.84260658753862 8.67746379310345 2.48126364740622 2.81723139653755 8.14645518080228 3.96436225030868 3.62039678260388 7.51694503877927 3.00696321306464 3.64679514480890 3.40738244048409 4.50953551880428 3.60907448894936 3.54600950160957 4.47301991486428 0.263827243875737 0.261058887353087 0.264244030970877 0.265113476599988 0.258553209009775 0.258876215338348 0.261552567164290 0.258553209009775 0.268215035654129 0.272386251079299 0.261412932524116 0.259493722251575 0.270317700197052 0.258553209009775 0.258553209009775 0.261797405787824 0.273099709655493 0.260294144995338 0.260114350367813 5 5 + 22484794 22485069 22484915.909 22484716 22485489 + gene protein_coding_gene TRUE TRUE AT5G55450.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid binding [Arabidopsis thaliana] (TAIR:AT5G55410.2); similar to MtN5 [Medicago truncatula] (GB:CAA75593.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 0.990812548071826 10.7937757891731 4.82823210694554e-07 2.75445505189825e-05 14.7640331270166 13.0180606280523 0.990812548071826 0.0750846582881516 AT5G42200_at 2.06864559793656 2.60883985226896 3.69790204580856 3.6236278796611 5.26233373441361 4.8425510275182 2.80407264009018 3.18194638959277 3.16668683122603 2.19327958707698 3.66381490983018 3.68632900610869 3.46167190179512 3.82529639227558 2.89820317573651 3.26767080548717 2.58168628794656 3.47899646466796 2.33094369267211 0.261870121533162 0.268553701803537 0.264197174421341 0.275522413624069 0.271987564763543 0.261185424107675 0.264243608476926 0.263684886562920 0.274059048798728 0.264578515809513 0.261185424107675 0.261185424107675 0.263403709736974 0.272697119353836 0.265081303258682 0.264363571992895 0.284484389125525 0.264909642355364 0.261185424107675 5 5 + 16877777 16878154 16877949.364 16877695 16878423 + gene protein_coding_gene TRUE TRUE AT5G42200.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5J (ATL5J) [Arabidopsis Thaliana] (GB:Q8L9W3;GB:Q9FHW6); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G20823.1); similar to Os06g0192800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057038.1); similar to putative Avr9/Cf-9 rapidly elicited protein [Oryza sativa (japonica cultivar-group)] (GB:BAD35269.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.24252473310042 10.7850739896658 4.8664213913342e-07 2.77146712009392e-05 14.7569979289828 6.47203755673091 1.24252473310042 0.135859768207075 AT5G64380_at 8.25638417912073 8.43352596447622 9.05016691449383 8.97973039674894 9.61608297801525 9.4833410345636 8.77311783447021 8.80852377629516 7.30021394529748 8.84327415612282 9.37657872464539 9.4723856082125 9.47922176430075 9.16722402860037 9.51318778259203 9.61958957170212 9.27574921027444 9.3332616257179 8.831205729637 0.146219795131613 0.138224262958486 0.142514815623828 0.146087020745086 0.140212816611714 0.137792941863508 0.139132362300329 0.140322981099516 0.189308416176597 0.143936160570078 0.142802030432450 0.137792941863508 0.139180581076891 0.148164592062830 0.137900238877071 0.137792941863508 0.156020373695316 0.146763939543376 0.150887269603328 5 5 + 25759599 25760216 25759884.818 25758475 25760424 + gene protein_coding_gene TRUE TRUE AT5G64380.1 fructose-1,6-bisphosphatase family protein similar to fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative [Arabidopsis thaliana] (TAIR:AT3G54050.1); similar to fructose-1,6 bisphosphatase [Bigelowiella natans] (GB:AAP79192.1); similar to Os06g0664200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058297.1); contains InterPro domain Inositol phosphatase/fructose-1,6-bisphosphatase; (InterPro:IPR000146) 0.89709711909237 10.7840727329752 4.8708365871729e-07 2.77146712009392e-05 14.7561880143200 17.7898830013687 0.89709711909237 0.0406639868476259 AT5G54830_at 3.35249899879249 3.27880554755534 4.30233814097146 3.79657925887975 4.42203009477989 4.4537948268462 3.24819900955895 3.62462868882284 2.91382918398027 2.91825126559697 4.47003032707912 4.6168971301117 4.34053321147830 4.20267729722091 4.03456298929704 4.42362192565048 4.12625098124836 3.95039528409294 2.8395680998761 0.260398794384706 0.239935899177794 0.245091952225772 0.258454874819915 0.236878029147470 0.247524353101761 0.241441787107493 0.243102537929057 0.270015115290052 0.245149637992053 0.249935756697205 0.240260423565556 0.241889202587015 0.243846889797077 0.239802383610402 0.239418688054726 0.242916466282754 0.236878029147470 0.245211135453193 5 5 + 22292791 22293135 22292918.727 22290296 22293527 + gene protein_coding_gene TRUE TRUE AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein similar to auxin-responsive protein -related [Arabidopsis thaliana] (TAIR:AT3G61750.1); similar to PREDICTED: similar to conserved hypothetical protein, partial [Strongylocentrotus purpuratus] (GB:XP_001198381.1); similar to Os06g0649700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058218.1); similar to Os09g0557700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063905.1); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Region of unknown function DM13, Skeletor; (InterPro:IPR006609); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593); contains InterPro domain DOMON; (InterPro:IPR013050) 1.12386207298742 10.7804202639489 4.88697965510176e-07 2.77236213279569e-05 14.7532327994499 7.39044465065427 1.12386207298742 0.109985881454787 AT5G25440_at 7.9703899262525 8.29796867915816 8.55143935598674 8.52650815174036 8.35166189865186 7.76307353402675 4.73272856495015 4.79209803210358 7.64567548236312 5.98618501806869 7.82640684623889 7.80390093185036 6.34812567347541 7.75331615305577 7.03603646004949 6.79153328607037 6.55173419273332 7.48152127631623 6.58609060454393 0.188864940847793 0.194270095212191 0.188864940847793 0.190454179020690 0.193959277712221 0.209492329538947 0.225559660687604 0.203347707194965 0.197902208507441 0.212315539734671 0.188864940847793 0.193913597800709 0.200345373607982 0.199525774564443 0.197788091655956 0.188864940847793 0.200366211107478 0.203917033331279 0.19102518584372 5 5 - 8855023 8855680 8855478.778 8854782 8856761 - gene protein_coding_gene TRUE TRUE AT5G25440.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G11410.1); similar to Os06g0727400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058637.1); similar to H0409D10.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66747.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 1.15481462598357 10.7785342706931 4.89533806358511e-07 2.77236213279569e-05 14.7517063865986 14.3424279615916 1.15481462598357 0.117101936656471 AT5G45420_at 6.25819021069563 6.26324869615709 7.3365488231918 7.3963306194196 7.13329816308948 7.20016706579154 6.88232123698451 6.98782008511104 6.09960848699694 5.94275833614306 7.06716672368727 7.32504493122653 7.0450935231522 7.16463076584447 7.04106460792853 6.95468378740835 6.89034628160109 7.0466567970929 5.94547848300174 0.179013027227113 0.180838857256514 0.183878678346550 0.189767693370024 0.190897812835366 0.188139770382286 0.18469987467952 0.186407017199724 0.208033900069937 0.191046741825569 0.182124999734552 0.179957986387898 0.186510191892552 0.185936587030371 0.186631616536023 0.176882510663718 0.184411662541425 0.179177987221752 0.197546935411889 5 5 - 18422899 18423433 18423204.727 18421296 18423833 - gene protein_coding_gene TRUE TRUE AT5G45420.1 myb family transcription factor similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to Os08g0159000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061040.1); similar to gonidia forming protein GlsA [Lilium lon (GB:BAC77346.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.869789301249065 10.7781450057636 4.89706515445227e-07 2.77236213279569e-05 14.7513912997328 13.4636327938667 0.869789301249065 0.0239797249542162 AT5G12890_at 7.83728030248526 7.88631248200878 8.61644736316166 8.70550605329273 8.26337057735454 8.43394724927221 6.62312554193178 6.76343414003533 6.3108064269441 6.77984994409886 6.87340533044929 6.98782969711237 6.84438729389541 7.5581863868596 6.8856034043609 7.25128335636866 7.59535648310832 7.11745432597282 6.61207482064476 0.182953864207282 0.181167254491695 0.186343601129349 0.187787548602942 0.192696706550313 0.196254138867948 0.184476062426485 0.190431947596114 0.200645412486422 0.183651926263960 0.188105984674791 0.184284334365577 0.190113294698916 0.185091407432526 0.185048342586262 0.180140314061842 0.191406771548287 0.197615899455117 0.190930862535647 5 5 - 4069702 4070226 4069955 4069580 4071230 - gene protein_coding_gene TRUE TRUE AT5G12890.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G36780.1); similar to cyclo-DOPA 5-O-glucosyltransferase [Mirabilis jalapa] (GB:BAD91803.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 0.899445457512505 10.7779374024592 4.89798651965146e-07 2.77236213279569e-05 14.7512232517802 14.7445606380237 0.899445457512505 0.0420770266254492 AT5G24610_at 9.3813870749312 9.41464807245977 9.78148450635276 9.75411589212792 10.0715025676628 9.90439763198916 8.89221612357317 8.83764799535036 7.9081516034857 8.0378478287103 8.91744559677905 8.82543067708903 8.95526766101896 8.99920813568268 8.93305157798107 9.04844916819838 8.90201601435836 9.06381228526536 7.88285846509521 0.103475360928802 0.0984218909976714 0.108323448448488 0.100542469500835 0.107884803199394 0.120188079717626 0.102142341731513 0.100554983636502 0.118593331929376 0.106423081826826 0.105218031594013 0.105281445542334 0.105521489959957 0.0985662909698012 0.0997944775845824 0.0984218909976714 0.103638581815928 0.114325493023461 0.108293172038493 5 5 + 8428596 8428966 8428807.182 8428081 8429256 + gene protein_coding_gene TRUE TRUE AT5G24610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49550.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47870.1) 0.879516420035368 10.7724824388207 4.92226385424621e-07 2.78247113972184e-05 14.7468062954727 17.9539438690444 0.879516420035368 0.0313210178107089 AT5G24450_at 8.2303314802044 8.31632680636298 9.30385861621756 9.20394301451992 9.71892099918196 9.34347785746385 7.99253250192039 7.85911848820795 7.63111285551027 8.2438487721326 8.67251609041195 8.6086329770481 8.78726996968218 8.71441683566537 8.20053082988425 8.9225858724368 8.83236255201114 8.66448564288699 8.14800811343308 0.148873898292195 0.153272556983536 0.149602216347773 0.149315263530550 0.153981482046139 0.148685187223602 0.154362593578367 0.149705065138419 0.175078843808672 0.149249316988387 0.153747323394361 0.148885781952840 0.156453183800197 0.151836915552072 0.158156640854324 0.153716585608360 0.149779387212389 0.152138392937474 0.150671659457424 5 5 + 8352049 8353086 8352536.364 8348247 8353306 + gene protein_coding_gene TRUE TRUE AT5G24450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49410.1); similar to Os01g0528100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043232.1); similar to transcription factor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73508.1); contains domain FAMILY NOT NAMED (PTHR13230); contains domain SUBFAMILY NOT NAMED (PTHR13230:SF1) 0.980333159283296 10.7676115886684 4.94405212866927e-07 2.79114863024382e-05 14.7428601123511 17.0875670588159 0.980333159283296 0.0726283797974681 AT5G10270_at 5.30573571399067 4.83607044553372 6.27432841918822 6.16271515465259 6.49912610471425 6.43974255682145 5.08985898264804 5.10825763803271 4.92129058639441 4.66942475540998 5.92957888175102 5.51645806200701 5.75514213488949 5.66314389495735 5.36405200339915 5.6307464929964 5.89108848025981 5.51995573670605 5.04332147916582 0.238532656615147 0.24482492992014 0.250671379668563 0.237471322966482 0.248554169328909 0.249645809047890 0.244991630675661 0.242655763310007 0.259123027320553 0.248190350907172 0.242632135155964 0.236814335517167 0.237712284102828 0.249708591036400 0.243538494998332 0.237678439947861 0.250476217760973 0.236814335517167 0.236912144676433 5 0|5 /|- 3221792 3222160 3221948 3221608 3224766 - gene protein_coding_gene TRUE TRUE AT5G10270.1 CDKC;1 (CYCLIN-DEPENDENT KINASE C;1); kinase similar to CDKC,2 (CYCLIN-DEPENDENT KINASE C,2), kinase [Arabidopsis thaliana] (TAIR:AT5G64960.1); similar to cyclin dependent kinase C [Solanum lycopersicum] (GB:CAC51391.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.01987790050344 10.7641211719986 4.95972990717339e-07 2.79635837772723e-05 14.7400310332604 10.9828708692115 1.01987790050344 0.0842312180349865 AT5G45900_at 6.54872943767658 7.02267572176197 7.72352593001316 8.05198640625473 7.83313705791274 7.68711441872885 5.82110527384161 6.03811278876907 6.46957374602612 5.72488476118318 6.52608254050775 6.79948945046687 6.59022659908346 6.96063051454365 6.17281945329134 7.0294117848852 6.52769555536907 6.86504682657134 5.535078438643 0.240170542178736 0.227226588995415 0.241042051609122 0.231297766754596 0.240374766299776 0.22974837780447 0.238171124043471 0.242416816892128 0.239440179944201 0.235935158855862 0.231840944238394 0.225133036855898 0.225133036855898 0.225133036855898 0.233200197628293 0.228268438768964 0.258018699466692 0.234805040849206 0.238069006603453 5 5|0 +|/ 18634837 18635594 18635231.778 18632449 18635787 + gene protein_coding_gene TRUE TRUE AT5G45900.1 APG7 (AUTOPHAGY 7) Component of autophagy conjugation pathway. Required for proper senescence. similar to autophagy protein ATG7 [Nicotiana benthamiana] (GB:AAW80630.1); contains InterPro domain E1-like protein-activating enzyme Gsa7p/Apg7p; (InterPro:IPR006285); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594) 1.12018241984373 10.7619807019411 4.96937089778227e-07 2.79815539640334e-05 14.7382955975059 13.3876838739735 1.12018241984373 0.109576026325792 AT5G08580_at 5.85241029529923 5.92302659390062 6.92107017432098 6.46521385342127 7.4593254345704 7.17289231735419 5.77466772073183 6.20077405878337 5.63062504940374 5.37859551568817 6.9497731833453 7.42222162966492 7.02926013117418 6.74313806779989 7.01337954527694 6.42874683933858 6.71323348651097 6.6361806371473 5.81287094527622 0.209399691823648 0.204049091746411 0.203106252123462 0.197966316771751 0.202941306823715 0.203737832358397 0.209348224120403 0.198423509770672 0.215246732460051 0.19846425601835 0.1984856998954 0.197002861830628 0.197002861830628 0.198631236877677 0.198789137398089 0.197002861830628 0.197002861830628 0.197002861830628 0.198148903549201 5 0|5 /|- 2780977 2781671 2781319.5 2780513 2783067 - gene protein_coding_gene TRUE TRUE AT5G08580.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27790.1); similar to Os01g0572700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043383.1); similar to Os02g0221800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046324.1); similar to calcium binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45102.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.16326681549041 10.7596437669626 4.97992005605497e-07 2.80045846171441e-05 14.7364004167476 12.7083503194586 1.16326681549041 0.119445607089349 AT5G62650_at 7.37339793318149 7.48176425392346 8.56645681167995 8.64459986149442 8.76762178371164 8.26710550685694 7.98273487227643 8.05392763637803 6.88735091765315 7.33783316563443 8.48989789803107 8.00945479431033 8.78810691104675 8.22878614940822 8.57795868472808 8.6753513283219 8.3795055311742 8.26278545823966 7.31791190199724 0.205889367579493 0.197634277215401 0.197391405417730 0.192605374074773 0.192065162801247 0.204696226356604 0.192599297779077 0.193264067343764 0.212748316538927 0.200447374381043 0.201656656005236 0.204838129613103 0.197085388397011 0.201134209307878 0.196532999445027 0.191777443991136 0.216384256923259 0.207192721304992 0.206811065169117 5 5 - 25170120 25171115 25170485.182 25169851 25173161 - gene protein_coding_gene TRUE TRUE AT5G62650.1 similar to Os01g0225300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042459.1) 1.04196933315424 10.7524116309757 5.01272112887996e-07 2.8117087832031e-05 14.7305323610327 15.9459575021890 1.04196933315424 0.0904919614116255 AT5G50400_at 7.18185145433011 7.64703189295194 8.5611977063289 8.70904251994506 9.09161394540585 8.73510583763865 7.5627154683027 7.59800751574353 7.07193558584736 7.01629354746686 7.83648380480737 7.45082597626187 8.44456685675901 8.19422872222196 7.4050453164132 8.61384118093982 8.70213365935338 8.04849426779976 7.40960594966422 0.1614518715963 0.149098971715150 0.153901585224812 0.154199574904546 0.159174754753645 0.165628636372229 0.154448788347901 0.151130472119126 0.155700121677421 0.162769914676011 0.149098971715150 0.149488180887464 0.1563709120637 0.157374992660707 0.167362829576858 0.153167081357240 0.161455733449093 0.159099772641621 0.155921570336967 5 5 - 20540802 20541374 20541063.455 20540801 20543695 - gene protein_coding_gene TRUE TRUE AT5G50400.1 ATPAP27/PAP27 (purple acid phosphatase 27); acid phosphatase/ protein serine/threonine phosphatase similar to ATPAP24/PAP24 (purple acid phosphatase 24), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G24890.1); similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G13750.1); similar to putative metallophosphatase [Lupinus luteus] (GB:CAD12839.3); similar to putative metallophosphatase [Lupinus luteus] (GB:CAD12837.1); similar to diphosphonucleotide phosphatase 1 [Lupinus luteus] (GB:CAD12836.1); contains InterPro domain Purple acid phosphatase, N-terminal; (InterPro:IPR008963); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 1.09892293245381 10.7523732265597 5.01289593605998e-07 2.8117087832031e-05 14.7305011880239 15.7622695429453 1.09892293245381 0.104779488470853 AT5G44050_at 1.67193924787418 2.15478575435669 4.24864760600738 4.33796585206442 3.49005325581431 2.823072640383 5.99262634882999 6.01348790439894 3.39959267534444 4.99124914844964 7.14746282748414 6.79651293831573 6.5866061468315 6.94494398880429 6.68483810418264 6.51264838489921 6.688415079027 6.93155978879412 3.62009639730244 0.286216129598911 0.285157658854288 0.274510029638507 0.273869578952583 0.269968171365137 0.276559311477479 0.269025348019221 0.271667116487955 0.280444497116264 0.272291174032912 0.269025348019221 0.269025348019221 0.276274883477144 0.276068260877009 0.270978064137692 0.269548384610020 0.281955236152658 0.285209137583632 0.269025348019221 5 0|5 /|+ 17742727 17743183 17742906.333 17739711 17743606 + gene protein_coding_gene TRUE TRUE AT5G44050.1 MATE efflux family protein similar to antiporter [Arabidopsis thaliana] (TAIR:AT5G10420.1); similar to ripening-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G65380.1); similar to 4D11_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67541.1); similar to 117M18_23 [Brassica rapa] (GB:AAZ66942.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 1.27485117914791 10.7490363619553 5.02810982213538e-07 2.81659845365946e-05 14.7277921503991 9.2367070667117 1.27485117914791 0.143376268732344 AT5G02880_at 8.44315570956635 8.53230971155362 9.5182242562364 9.71298368875395 9.8732823180951 9.5332509705668 8.08850188375163 8.13752342619665 8.7955866310539 8.77271949500036 9.35071276789397 9.15044509401263 9.48176589102716 9.34886754780523 9.00799333980441 9.89920066465281 9.61993667693272 9.51390403821085 8.95259855511845 0.108360952311221 0.105487971693831 0.103384191977495 0.099342008208892 0.100406218614367 0.102926668311824 0.116959464086394 0.107220885565484 0.114638323019426 0.102499798659642 0.101453930251603 0.100421809303077 0.0990918477858573 0.103151773494697 0.104522604474348 0.102874099042257 0.109890324177481 0.104989083808184 0.103360523289364 5 5|0 +|/ 667693 668816 668265.444 662641 669105 + gene protein_coding_gene TRUE TRUE AT5G02880.1 UPL4 (ubiquitin-protein ligase 4) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. similar to KAK (KAKTUS) [Arabidopsis thaliana] (TAIR:AT4G38600.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS72363.1); similar to Os05g0122400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054503.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HECT; (InterPro:IPR000569); contains InterPro domain HEAT; (InterPro:IPR000357) 0.970182158898786 10.7462561042124 5.04082427286045e-07 2.82007720242351e-05 14.7255342514799 18.1108564020568 0.970182158898786 0.0700613044023573 AT5G52820_at 7.68945033866183 7.8414943051771 8.4299594256382 8.5555075705408 8.08475602579291 7.93913776317645 6.65734811046431 6.85706870122026 6.68768563085753 6.0072795981148 6.91818216454781 7.15461881273575 6.9860602989602 7.08920815054394 6.94508775731804 7.16076592626277 7.45977840489997 6.91230363107035 5.96491018437538 0.212698775390718 0.220086093052505 0.224539824363312 0.222697302832388 0.230004709291323 0.222402442482797 0.208970957257725 0.211367568101492 0.215561269601257 0.219923746205360 0.215400113701135 0.207391148162411 0.210658037897694 0.209311571608002 0.209617181803918 0.207541773403622 0.216183248226309 0.209756079556760 0.225044623008766 5 5|0 +|/ 21420460 21421223 21420810.556 21418575 21421611 + gene protein_coding_gene TRUE TRUE AT5G52820.1 WD-40 repeat family protein / notchless protein, putative similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to Putative notchless protein homolog [Oryza sativa (japonica cultivar-group)] (GB:AAK00422.2); similar to notchless-like protein [Solanum chacoense] (GB:AAR88094.1); similar to Notchless, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46583.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain NLE; (InterPro:IPR012972); contains InterPro domain G-protein, beta subunit; (InterPro:IPR001632) 0.924646002291335 10.7293463808534 5.11891086163077e-07 2.85639122739677e-05 14.7117869856135 14.4059448372881 0.924646002291335 0.0547172185452817 AT5G53450_at 9.94129569834904 10.0199112215080 10.4079059638280 10.3337448904651 12.0269395102426 11.9134853277857 10.3148475750934 10.2049486849927 10.7284294454749 11.6046422036492 11.8120963713761 12.2162144691740 12.630568665966 12.2843316570113 11.6397506391555 12.5798418726768 12.3718060192486 10.5567324106828 11.5826864058838 0.100377950150519 0.10105368242534 0.097637718851185 0.102788665899955 0.0941631548748144 0.0948771935144897 0.0953156610457974 0.100629853341373 0.106186894076667 0.0955139099058225 0.093577479978093 0.094685380476820 0.0961299039243693 0.0965192225057676 0.0969744985075393 0.093577479978093 0.100794245153490 0.103722731747701 0.093577479978093 5 5 + 21708874 21709348 21709098 21705989 21709677 + gene protein_coding_gene TRUE TRUE AT5G53450.1|AT5G53450.2|AT5G53450.3 ORG1 (OBP3-RESPONSIVE GENE 1); kinase similar to Proteinase inhibitor I4, serpin; Protein kinase [Medicago truncatula] (GB:ABE80838.1); similar to Os01g0655500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043752.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.878216603126647 10.7213587845136 5.15625265344792e-07 2.8735299946857e-05 14.7052845194543 22.3037200831151 0.878216603126647 0.0331208194190441 AT5G52200_at 7.87468419288079 7.7913856112279 8.5570296328003 8.67624639202987 8.72796085354224 8.66189166242398 7.58290053551864 7.4809037645614 7.57868049350379 7.46109801758902 8.33139303005855 8.3447508451102 8.11106880831252 8.3398995566045 8.30484141157746 8.0790996290668 8.31738555148519 8.27534084828052 7.40469969683082 0.167506154539086 0.172697604638463 0.169188847767836 0.174655594383047 0.164290790977392 0.166872999199017 0.169832672622242 0.178579789424404 0.198228549733258 0.173793080479116 0.17181053652431 0.171237682598162 0.164290790977392 0.164290790977392 0.176662653717607 0.167887515201618 0.1724655300538 0.176689274597229 0.168944639114704 5 0|5 /|- 21220046 21220945 21220372.75 21219865 21221985 - gene protein_coding_gene TRUE TRUE AT5G52200.1 phosphatase inhibitor/ protein phosphatase inhibitor similar to Os05g0301600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055135.1); similar to hypothetical protein MBP_81C12.14 [Musa balbisiana] (GB:ABF70088.1); contains InterPro domain Protein phosphatase inhibitor 2 (IPP-2); (InterPro:IPR007062) 0.877396666619672 10.7177718713206 5.17311759155937e-07 2.87922785542299e-05 14.7023626986767 16.0413579286414 0.877396666619672 0.0327982048187613 AT5G55290_at 9.5432202294542 9.67708807249294 10.3176310507423 10.3361576948216 10.6915344623538 10.3628184132507 9.44623400803537 9.32818900865231 9.37841423551914 9.1333047405135 10.4360339767852 10.4164157261309 10.2327081314721 10.3563147509893 10.3166630724417 10.2624229198353 9.7321410011196 10.2194669712850 9.30420426592727 0.0876326858917265 0.0841262047602684 0.086876538846228 0.085859588916906 0.0866715373836165 0.0889628808916453 0.0882649459120919 0.0873713843668998 0.0916237628159828 0.091384280293508 0.0856870412280817 0.0876881481945624 0.084990635432139 0.0880635239099977 0.0880780812085868 0.0862258211219465 0.0994780448335124 0.0858352954304467 0.0892325094129676 5 5|0 -|/ 22440269 22441277 22440847.5 22440263 22441312 - gene protein_coding_gene TRUE TRUE AT5G55290.1 ATP synthase subunit H family protein similar to ATP synthase subunit H family protein [Arabidopsis thaliana] (TAIR:AT4G26710.2); similar to similar to ATP synthase subunit H protein [Solanum lycopersicum] (GB:BAD95792.1); contains InterPro domain ATPase, V0 complex, subunit H; (InterPro:IPR008389) 0.951449490202068 10.7162618763599 5.18023520140692e-07 2.8794929424417e-05 14.7011323521968 19.7221067338474 0.951449490202068 0.0648095373743578 AT5G58970_at 6.92536390266351 7.27356913662693 7.70761170627383 7.89943782103565 8.54344302918422 8.11103615651447 7.70066837987047 7.80869778334959 6.52227216918486 6.66748188836104 8.35368449464266 8.38885192649497 7.96327452223787 8.28312155616382 8.10791433012294 8.11364166305233 7.86830262502374 7.94363627870735 6.57631834050156 0.182066192523934 0.178081376020848 0.190526681214385 0.183871378812015 0.179364154356013 0.185370677191717 0.180482518001402 0.181467889270415 0.201590672724517 0.183996156370664 0.178081376020848 0.180178289881376 0.184508027685413 0.187108651667624 0.189751428317382 0.180943999882196 0.185734484649914 0.189528646501552 0.184420392838893 5 5|0 -|/ 23826057 23827193 23826727.8 23825687 23828484 - gene protein_coding_gene TRUE TRUE AT5G58970.1|AT5G58970.2 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler|ATUCP2 (UNCOUPLING PROTEIN 2) uncoupling protein similar to ATPUMP1/UCP1 (UNCOUPLING PROTEIN 1), binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to SfUCPa [Symplocarpus foetidus] (GB:BAA92172.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030)|similar to ATPUMP1/UCP1 (UNCOUPLING PROTEIN 1), binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to SfUCPa [Symplocarpus foetidus] (GB:BAA92172.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030) 1.08871000141549 10.7100868269238 5.20945325187932e-07 2.89078324202145e-05 14.6960988279232 15.1044756013923 1.08871000141549 0.103354382344656 AT5G43930_at 6.90248905561991 6.59841193165122 7.79634286188522 7.92912310464992 8.61287788037277 8.03813090907197 6.4448722302148 6.10037119921501 6.48329546635429 5.57601864685137 6.8157708658178 6.72204715934822 7.02148708006812 7.20399908707875 6.46272774285252 7.22345379166353 7.10975985296024 7.05316279508905 6.32413686452935 0.193089287096159 0.188121901501461 0.186234168277817 0.184868577131156 0.189744607215938 0.188822857664338 0.195544830050472 0.198563983308067 0.190248736272625 0.194395721540059 0.191023022268568 0.183922942067742 0.182392541248136 0.189835268265350 0.193443821890051 0.184832712138893 0.198401228581888 0.194613771913273 0.185864831255624 5 5 + 17696734 17697769 17697173.182 17694050 17698327 + gene protein_coding_gene TRUE TRUE AT5G43930.1|AT5G43930.2|AT5G43930.3 transducin family protein / WD-40 repeat family protein|nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04140.2); similar to Os02g0290300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046589.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71197.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 1.20315831955059 10.7079793814526 5.21946585185666e-07 2.89078324202145e-05 14.6943802000615 13.8425114163042 1.20315831955059 0.129399133347380 AT5G08240_at 4.8501659762889 5.41888657334926 5.44406690431898 6.15608016859478 6.26557772496775 6.18827130410083 1.91627986135501 2.02231547624129 3.35053972173016 2.19338265487748 2.51293284294977 2.77991194515363 2.78133522618246 2.49591745804254 2.50517401051147 2.66684940126182 2.81874983381093 2.72754584234526 1.72500017417532 0.315182905813841 0.311834789105426 0.339641087461259 0.338389685763429 0.334985199880861 0.337627650449483 0.304745298801461 0.303659853263714 0.31455331502266 0.303659853263714 0.303659853263714 0.303659853263714 0.310665930730028 0.303659853263714 0.306746844923821 0.308772055804112 0.307434447204351 0.311373098145701 0.308140387789002 5 5 - 2651387 2652115 2651638.182 2650838 2652387 - gene protein_coding_gene TRUE TRUE AT5G08240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23160.1) 1.34983247006244 10.7077517359878 5.22054865992174e-07 2.89078324202145e-05 14.6941945311719 7.32471862546538 1.34983247006244 0.159325541052033 AT5G51280_at 7.9999251127101 8.09786778938718 8.9083956821355 8.94174956048946 8.4795669592583 8.41181488245844 7.4980195783079 7.80213584282937 7.00350717823473 7.0855847581196 7.99570417741511 8.40433597718006 8.10190918091578 8.23192351133126 7.82850808098482 8.35676395624222 8.56925496851452 8.10015697968236 7.44852461099786 0.166345163004098 0.172143784968727 0.166451994982173 0.166804657299342 0.171952902271496 0.177462239062384 0.168465537285971 0.179880974616870 0.187274816331712 0.172899552197179 0.171209170261381 0.165597176684802 0.165022383163526 0.167250896809944 0.178692297950651 0.171417737756038 0.164452049889766 0.169749443031753 0.176771528413486 5 5 + 20860285 20860833 20860648.545 20858474 20861032 + gene protein_coding_gene TRUE TRUE AT5G51280.1 DEAD-box protein abstrakt, putative Identical to Probable DEAD-box ATP-dependent RNA helicase 35 (EC 3.6.1.-) (RH35) [Arabidopsis Thaliana] (GB:Q9LU46); similar to DEAD-box protein abstrakt, putative [Arabidopsis thaliana] (TAIR:AT4G33370.1); similar to putative DEAD-box protein abstrakt [Oryza sativa (japonica cultivar-group)] (GB:BAD38045.1); similar to putative DEAD-box protein abstrakt [Trifolium pratense] (GB:BAE71218.1); similar to DEAD/DEAH box helicase, putative [Medicago truncatula] (GB:ABE77883.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.927629389262996 10.7004586962915 5.25536790316357e-07 2.90368693100116e-05 14.6882438770367 15.9563219858557 0.927629389262996 0.0568142165305115 AT5G51710_at 4.84235110109258 5.09797971355678 5.83930404014207 5.83723954076081 5.40050819196951 5.39996167137693 4.7712379908743 4.77596349429327 4.00715875464517 3.37518480076786 4.81758754193876 4.92316136658421 4.49771869233972 4.45955122421713 4.56046638046797 4.66962462648879 5.16163413935797 5.28988101839667 3.86820123969303 0.239227289574362 0.240201307778594 0.255843752396104 0.243270480546316 0.241141188324059 0.251170363154809 0.243487845888302 0.242018525568602 0.252174959927071 0.238730852431701 0.250048743661517 0.241951396151205 0.243163948274239 0.257589002214638 0.242127161325372 0.244158974645625 0.249814230406043 0.246624073596418 0.244000197412143 5 5|0 -|/ 21021984 21023105 21022440.444 21021504 21025944 - gene protein_coding_gene TRUE TRUE AT5G51710.1 KEA5 (K+ efflux antiporter 5); potassium:hydrogen antiporter member of Putative potassium proton antiporter family similar to KEA6 (K+ efflux antiporter 6), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G11800.1); similar to ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G19600.1); similar to Os06g0561200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057872.1); similar to Putative potassium/proton antiporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19118.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.897320905731657 10.6982299956700 5.26605869323719e-07 2.90368693100116e-05 14.6864244666046 9.51938557905458 0.897320905731657 0.044246825023131 AT5G05390_at 1.16713729563954 1.10783980550334 2.79940328355606 2.81445668537237 1.79381026388040 2.35936793208622 1.41685637095538 1.24374995925760 1.19584282611655 1.46626795848458 1.90833991732646 1.78523306308313 2.20946863293618 2.60524367766596 1.87174786592099 2.06895470207056 4.21113326432796 1.77393934125304 1.36087642504400 0.232801772600071 0.23535458832119 0.234867563468247 0.233220509153306 0.225886346539895 0.232301130327109 0.230610038908321 0.233521850255982 0.241023440253443 0.230959732747783 0.227040767245761 0.233510760517689 0.234474951010966 0.235808729462389 0.229798600850438 0.226879540754053 0.262091010159539 0.230099017291993 0.231248171161529 5 5 + 1596373 1597019 1596666.727 1594754 1597043 + gene protein_coding_gene TRUE TRUE AT5G05390.1 LAC12 (laccase 12); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to LAC3 (laccase 3), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G30210.1); similar to LAC13 (laccase 13), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07130.1); similar to LAC5 (laccase 5), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G40370.1); similar to laccase [Populus trichocarpa] (GB:CAA74104.1); similar to Multicopper oxidase, type 1; TonB box, N-terminal [Medicago truncatula] (GB:ABE84876.1); similar to diphenol oxidase laccase [Glycine max] (GB:AAM54731.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 1.08556275245473 10.6974615443347 5.26975033230287e-07 2.90368693100116e-05 14.6857970363459 3.66045434684207 1.08556275245473 0.102900477624566 AT5G59180_at 5.72739394561285 5.83413280861145 7.31392359287142 7.02956374652101 7.47873898816312 6.60407873250685 5.84242525651743 5.7816862642614 4.15379609284160 4.22984411537426 5.49490234991134 6.12997101866114 5.89176110830161 5.64366466515501 5.86070931474512 5.56204149943121 5.0736546961148 4.8673956386818 4.11397184821371 0.251918916529956 0.252167281484092 0.252695188397925 0.256232673586813 0.261732025526950 0.267079159496846 0.259235801631338 0.256921476267875 0.257639915632699 0.258763019769207 0.253631235018914 0.251918916529956 0.253296531330993 0.252839028406829 0.253355860712189 0.251918916529956 0.275418277123598 0.257322875164225 0.251918916529956 5 5|0 +|/ 23900751 23902172 23901574.111 23900643 23902434 + gene protein_coding_gene TRUE TRUE AT5G59180.1 DNA-directed RNA polymerase II Identical to DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) (RPB19) [Arabidopsis Thaliana] (GB:P38421); similar to RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G14660.1); similar to DNA-directed RNA polymerase II 19 kDa polypeptide (RNA polymerase II subunit 5) (GB:P46279); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029); contains InterPro domain RNA polymerase Rpb7, N-terminal; (InterPro:IPR005576) 1.35490427358177 10.6972434004364 5.27079880764061e-07 2.90368693100116e-05 14.6856189152944 11.3171845278091 1.35490427358177 0.160575099200756 AT5G37930_at 6.86720835082109 6.9163906589354 8.17566498601834 8.15510003798673 8.97420811459516 8.32838870344432 7.01552527332674 6.70846485025472 7.25398732213678 6.93382041466717 8.03505311984547 7.6079311024332 7.84068936906409 7.98935541326667 7.69428644036999 7.95595053284136 7.57909800289602 8.10030125297792 6.89337943573873 0.217966943377645 0.202473430072267 0.217120328679850 0.1997839986835 0.206273485477261 0.215166542199334 0.217885980893215 0.210971064743575 0.225265703916771 0.204375116453267 0.205557223768995 0.21278385543632 0.205572918165034 0.204742941024854 0.217035355995915 0.199752414988663 0.224508059479146 0.210427095488786 0.204761451678364 5 5 - 15119487 15119957 15119731.273 15119430 15120899 - gene protein_coding_gene TRUE TRUE AT5G37930.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) protein, putative [Arabidopsis thaliana] (TAIR:AT1G66650.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 1.17735697027047 10.6958840459268 5.27733744694589e-07 2.90368693100116e-05 14.6845088671021 15.0813166444525 1.17735697027047 0.124094871565766 AT5G26210_at 7.03372539886888 7.06453936643415 8.07245230817761 7.95876804246755 8.86414535468374 8.57026724162752 7.47178993739495 7.77901822794892 6.56068499514367 7.24891528513733 8.38748798737762 8.20146731568163 8.10788274330853 7.7662675442441 7.71568271481995 8.17117925119707 8.0989193784461 7.94358360955178 7.51182245855157 0.171596941102024 0.174802365442606 0.176580708573606 0.177101762741199 0.179649972293723 0.176448717928125 0.181683278709795 0.174395843832949 0.181960830896902 0.176445074736809 0.182521797369789 0.175477050496042 0.189955710648828 0.185233498104611 0.183971085834765 0.171755197888513 0.190597381976256 0.177238123678176 0.176906425113830 5 5|0 -|/ 9158570 9159336 9159050.222 9158323 9160386 - gene protein_coding_gene TRUE TRUE AT5G26210.1 PHD finger family protein Identical to PHD finger protein At5g26210 [Arabidopsis Thaliana] (GB:O81488;GB:Q8LBJ5); similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G20510.1); similar to PHD4 [Glycine max] (GB:ABI97243.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.98552895460577 10.6905171101757 5.30323920462193e-07 2.91413375684553e-05 14.6801246410381 15.4299381002117 0.98552895460577 0.0763457830478632 AT5G60620_at 8.93904001073002 8.86574611033645 9.54088900652678 9.70470479627274 9.91683276973783 9.7112529907707 8.45133331790452 8.48711582221495 8.87876120310278 8.65262791004988 9.5896767748155 9.47581868514412 9.57991818564398 9.33414959335324 9.40617202090913 9.5436500838501 9.5344914965807 9.47911202906084 8.62096380825983 0.126926957749064 0.132451394085557 0.134991920294706 0.130057663993196 0.129154450943930 0.131907120707517 0.129267362255053 0.1299374026302 0.128584008173296 0.126489542237189 0.129845966206065 0.123076957134241 0.124100432340976 0.127750741095251 0.130738031487412 0.123248011943702 0.123544181887334 0.127894976127529 0.129123144616875 5 5|0 +|/ 24385541 24386832 24386198.8 24384424 24387016 + gene protein_coding_gene TRUE TRUE AT5G60620.1 phospholipid/glycerol acyltransferase family protein similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G80950.1); similar to Phospholipid/glycerol acyltransferase [Medicago truncatula] (GB:ABE86597.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) 0.904016855198035 10.6891691054336 5.30976659145658e-07 2.91413375684553e-05 14.6790230633309 18.3072766442987 0.904016855198035 0.0476296744837645 AT5G61780_at 8.34784338567512 8.49225146697538 8.40002218334162 8.36536928656122 8.94232445959605 8.31126581626676 7.77320582097928 8.06549006203047 7.07837838726329 7.5557168369491 9.32318369668785 9.76752672922866 9.14348152292331 9.4173969605535 9.48916181589347 9.28988478205506 8.83451525373158 8.73002903206271 7.09080909043579 0.166821349748991 0.162525822698786 0.168589111437536 0.166409723691807 0.162405432031985 0.172923091590127 0.165706440162737 0.166006829862915 0.191288547579444 0.171194293242565 0.167151308285770 0.160443751565622 0.160470291796529 0.160443751565622 0.164670255574228 0.160443751565622 0.185824751690821 0.168683893056429 0.193208069779075 5 5 + 24843081 24843840 24843477.818 24838484 24844195 + gene protein_coding_gene TRUE TRUE AT5G61780.1 tudor domain-containing protein / nuclease family protein similar to tudor domain-containing protein / nuclease family protein [Arabidopsis thaliana] (TAIR:AT5G07350.1); similar to Tudor; Staphylococcus nuclease subtype [Medicago truncatula] (GB:ABE80217.1); similar to TUDOR protein with multiple SNc domains [Picea abies] (GB:CAL38976.1); similar to 110 kDa 4SNc-Tudor domain protein [Pisum sativum] (GB:BAC06184.1); contains InterPro domain Maternal tudor protein; (InterPro:IPR008191); contains InterPro domain Staphylococcus nuclease subtype; (InterPro:IPR006022); contains InterPro domain Tudor; (InterPro:IPR002999); contains InterPro domain Staphylococcus nuclease (SNase-like); (InterPro:IPR006021) 1.17140522755949 10.6842825543139 5.33350181515489e-07 2.92345966408817e-05 14.6750284741681 16.5827376830239 1.17140522755949 0.123066033574702 AT5G48150_at 9.19500590312092 9.42117917390642 10.2285153509961 10.2610199605091 10.5194576722156 10.5827245132213 9.7061330415871 9.81010936441498 9.66208490822844 9.80234176361963 10.5685156911509 10.6997883893033 10.9797062016226 10.6886481032660 10.5869331020189 11.1212170762045 11.0232022531729 10.7022443854196 10.1362272519921 0.085827645330219 0.0810349074129865 0.082799127921909 0.0830049518000119 0.0832198877304293 0.0851991890787031 0.0809000681619924 0.0799082132530014 0.0924753640720486 0.0812267213124039 0.084566487311661 0.0799082132530014 0.0827097278083036 0.0811413261969218 0.0836721985418567 0.0799082132530014 0.0825806776443281 0.0877737999957321 0.0824791773693186 5 5|0 -|/ 19539724 19540367 19540076.9 19539481 19541924 - gene protein_coding_gene TRUE TRUE AT5G48150.1|AT5G48150.2 PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. similar to SCL21 (SCARECROW-LIKE 21), transcription factor [Arabidopsis thaliana] (TAIR:AT2G04890.1); similar to GRAS7 [Solanum lycopersicum] (GB:ABD72963.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.897109881233968 10.6815266551781 5.34693874445182e-07 2.92712433012287e-05 14.6727746921481 20.2971013932714 0.897109881233968 0.044802334091452 AT5G14250_at 6.56975006262849 6.79142608336214 8.26123096858097 8.31435140402587 8.30853349312834 7.7956813066655 7.18549783716091 6.00159915444996 5.3257914132473 5.47589943715861 6.88212626435864 7.14562279583143 6.88389246314666 7.09402116366262 7.24887376957869 7.2164277528097 7.48429788028983 6.99179043147114 4.87685276945778 0.211662384008139 0.209316753935558 0.209650507276568 0.206094932034 0.209538409196442 0.206665072363127 0.213073987385305 0.228316311139174 0.222087120041669 0.215127952374096 0.208269328392950 0.208081042254853 0.209218361268306 0.206619325183033 0.219075577935776 0.205397658385660 0.209433880354579 0.212551703851109 0.211827550607060 5 0|5 /|+ 4599398 4600525 4599980.857 4597889 4600762 + gene protein_coding_gene TRUE TRUE AT5G14250.1|AT5G14250.2 COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13) Encodes subunit 3 of the COP9 signalosome. Identical to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (CSN3) [Arabidopsis Thaliana] (GB:Q8W575;GB:Q93VY1;GB:Q9LYA4); similar to 26S proteasome regulatory subunit S3, putative (RPN3) [Arabidopsis thaliana] (TAIR:AT1G75990.1); similar to Proteasome component re (GB:ABE81110.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|Identical to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (CSN3) [Arabidopsis Thaliana] (GB:Q8W575;GB:Q93VY1;GB:Q9LYA4); similar to Proteasome component re (GB:ABE81110.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 1.71254068361108 10.6764060715011 5.37200293034561e-07 2.93713694391779e-05 14.6685852858368 13.5757901746327 1.71254068361108 0.226734335362066 AT5G55660_at 7.86127055237703 7.82115081459543 8.3621111998122 8.4095727111078 8.6562092633625 8.68189914956558 7.79902409756048 7.43549903376551 6.6145721763977 7.36227376978886 8.24253344205486 8.33288056917023 8.11947244519039 8.24586053720903 8.14518557979019 8.15546079440268 8.5546760068999 8.0506889664568 7.4411045976682 0.144070653243818 0.144352534605136 0.147738023256659 0.143986172771584 0.153716109841143 0.148488301439303 0.142323982914755 0.154622570521779 0.174681318544312 0.155256093869405 0.147331978137245 0.145260760411410 0.144882272038453 0.145461958962661 0.149343169536445 0.143634823299945 0.150703006168813 0.141059531343197 0.16049262760209 5 5|0 +|/ 22559401 22560335 22559674.111 22555839 22560700 + gene protein_coding_gene TRUE TRUE AT5G55660.1 GTP binding / RNA binding similar to GTP binding / RNA binding [Arabidopsis thaliana] (TAIR:AT4G26630.2); similar to Os03g0596900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050604.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO59982.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897) 0.944869950541287 10.6696216173408 5.40540823761442e-07 2.95167909264736e-05 14.6630310193894 15.8134229230675 0.944869950541287 0.0639770314570056 AT5G52560_at 8.04471801361608 8.10193917727299 8.88374405409597 8.92699002333813 9.21588042433551 8.95124312798243 8.70613673420683 8.55210684784116 8.37359291182708 7.91168687167525 9.44680233985502 9.45477360084617 9.23943759267432 9.28565113348425 9.27232223980785 9.4510240998331 8.93827846907102 9.18859059231054 7.9887910403639 0.143704303755065 0.136936570350413 0.135654610289261 0.133918841613589 0.132945033881655 0.140215867315872 0.140549229222484 0.137261807335432 0.140711107268670 0.152752250157733 0.133711895548931 0.130939165140064 0.134348260382432 0.143128045149343 0.138988808057280 0.134250724514160 0.157429072518422 0.146420652990728 0.134513210087321 5 5 + 21350803 21351766 21351229.909 21347865 21352037 + gene protein_coding_gene TRUE TRUE AT5G52560.1 UDP-N-acetylglucosamine pyrophosphorylase-related This gene was shown to have sequence similarities with pea PsUSP gene, encoding an UDP-sugar pyrophosphorylase. similar to UDP-N-acetylglucosamine pyrophosphorylase-related [Arabidopsis thaliana] (TAIR:AT1G31070.2); similar to UDP-galactose/glucose pyrophosphorylase [Cucumis melo] (GB:ABD59006.1); similar to UDP-sugar pyrophospharylase [Pisum sativum] (GB:BAD66876.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71295.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618) 0.91824614070014 10.6637855317733 5.43432459205974e-07 2.96373650154253e-05 14.6582499062477 17.3608282752231 0.91824614070014 0.0544235814898876 AT5G42250_at 9.05148950514134 9.2287748997786 10.3050887305484 10.2502795676244 10.6370548115194 10.0725810039809 9.94194514058917 9.68653072374264 9.07989140079512 9.28427463704241 10.8073721025068 10.2954455505753 11.0970047459446 10.8944703279314 10.0442367674643 10.6782396379442 10.7724132480978 10.3161679718086 9.27848501244785 0.118430544710435 0.118570015506364 0.117522558303122 0.116064539883935 0.116878234546860 0.115986890133953 0.118675722008190 0.118743305307702 0.13568854640601 0.122614517122052 0.117931499057191 0.117055875631052 0.115008639081099 0.118163461473366 0.11943764696639 0.115008639081099 0.119646720307713 0.130074955996223 0.124493524654416 5 5 + 16913531 16914620 16914200.636 16911237 16914844 + gene protein_coding_gene TRUE TRUE AT5G42250.1 alcohol dehydrogenase, putative similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT4G22110.2); similar to alcohol dehydrogenase ADH [Lycopersicon esculentum] (GB:AAB33480.2); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 1.11900886918883 10.6544157914176 5.48110147962962e-07 2.98407506481630e-05 14.6505676086775 19.8104109532636 1.11900886918883 0.111925217210144 AT5G41940_at 7.11450033879973 7.36447971730617 7.92744721301725 8.14507174253566 8.24823838960132 8.28435863467284 7.06435267961782 6.76562508221617 6.96686871482369 6.70345057435583 7.82410976038125 7.75806315208416 7.59151720022424 7.7488680203923 7.57431373940014 7.91683421002074 7.97949535915608 7.66931462744896 6.90992147808599 0.140665264725614 0.145684118403145 0.143873458343814 0.149132911792474 0.150529817525793 0.148307241926648 0.152416338348812 0.145918041591471 0.156965882260372 0.150711627458145 0.146756844271773 0.141262622627157 0.139922061945614 0.143079593666921 0.143223783235137 0.139018692126235 0.142128420210696 0.141516363163888 0.154024496331857 5 5 + 16799269 16802596 16801055.421 16799175 16802804 + gene protein_coding_gene TRUE TRUE AT5G41940.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to RabGAP/TBC [Medicago truncatula] (GB:ABE88406.1); similar to Os10g0518100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065072.1); similar to Os09g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063739.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.985886896677556 10.6535626006990 5.48538257616668e-07 2.98407506481630e-05 14.6498676874415 14.9232066069177 0.985886896677556 0.0774683943184599 AT5G67020_at 2.78826940485716 3.16116171520272 2.83164091028982 3.29214293696764 3.07412195152806 3.22217202291826 2.44318455746603 2.44700112381198 2.87656099189182 2.09241351764250 4.39882323348492 4.26137232147026 4.46538918985525 4.42691175325877 3.21347225299835 4.4530161895865 4.15106080042185 4.9892595620983 2.54735040621825 0.244185635860956 0.241371060254352 0.249726161289477 0.242068450099003 0.248828089524152 0.242063495697276 0.244800627187141 0.243839841198653 0.252350217857341 0.249897663220266 0.240700211902184 0.245306494062405 0.241207754407578 0.244042448288356 0.247230740932447 0.249790489360273 0.247482111548 0.254400480453992 0.24477385408718 5 5 + 26767779 26768305 26768060.182 26767076 26768475 + gene protein_coding_gene TRUE TRUE AT5G67020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50340.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09363.1); contains domain DHS-like NAD/FAD-binding domain (SSF52467); contains domain Nucleotidyltransferase (SSF81301) 1.09229338970203 10.6503449925075 5.50156044263485e-07 2.98912543258106e-05 14.6472275192888 6.30763922862069 1.09229338970203 0.105697190410830 AT5G64550_at 6.4287059533466 6.39343213405524 7.21025458806193 7.4226820718291 6.2146743946448 6.40947367550405 5.52921476504479 6.04140216377019 3.64956073745269 4.60399536862454 4.53089213777638 5.49607207689765 5.329140440959 5.77947355142892 4.85045102715851 5.91925540672247 6.19689657108906 5.99439532086107 3.97622686646585 0.204539045385839 0.214003240980645 0.207707020678268 0.213656186457491 0.206538336906834 0.214528951165251 0.206711718159008 0.208167427594387 0.233531413596304 0.216270407534711 0.209288164014402 0.20261644957166 0.203117287224815 0.207940712798983 0.211643757031171 0.204438810030392 0.205450969713252 0.210164768502648 0.221223136436434 5 5 - 25819042 25819535 25819268.545 25818754 25822206 - gene protein_coding_gene TRUE TRUE AT5G64550.1 loricrin-related similar to loricrin-related [Arabidopsis thaliana] (TAIR:AT5G09670.1); similar to Os04g0458200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052976.1); similar to OSIGBa0097P08.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67071.1); similar to B0414F07.3 [Oryza sativa (indica cultivar-group)] (GB:CAH68133.1) 1.07578008544319 10.6415688192351 5.54595044603389e-07 3.0073229199239e-05 14.6400216782620 11.2505631636784 1.07578008544319 0.101889726036510 AT5G50020_at 4.94873783779995 4.92941652382065 5.64405591829084 5.49736911255267 6.6443691649548 6.10507001876154 5.69274846521198 5.37958792913158 5.16959469780705 4.8966349703083 6.76407823831579 6.65408456196685 6.61584012420245 6.95893089185955 6.50060656866313 6.32921038965053 6.38400691923402 5.92806451757136 5.00987165731006 0.240524312787279 0.232966701308785 0.231765200948516 0.228503347914658 0.233294541594003 0.2369707358924 0.228079839762689 0.225161740736549 0.247036514857702 0.238448925428292 0.229174722830637 0.224688725770276 0.225799924776254 0.231403190653885 0.228277234517237 0.224688725770276 0.236415308224678 0.241954478464466 0.238461577597615 5 5|0 +|/ 20370677 20371325 20371028 20368568 20371662 + gene protein_coding_gene TRUE TRUE AT5G50020.1 zinc finger (DHHC type) family protein similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G24630.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE86020.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 1.11328951630337 10.6409833271039 5.54892568941636e-07 3.0073229199239e-05 14.6395407061189 11.3762793137695 1.11328951630337 0.110917566986667 AT5G51840_at 6.26769054729645 6.20863083158435 6.4287607046546 6.41716845804091 6.78662507881452 6.88966722338343 5.83070365329812 5.75285455158866 5.6257451987182 5.51727506330773 7.15090658526354 6.91025816916743 6.67852593389452 6.73418625189603 7.14090003026195 6.40665548902873 6.04348350181653 6.82413109092512 5.75857849240726 0.159072740300166 0.167116742562206 0.162968482135197 0.167990044398187 0.165862080837185 0.160548571775907 0.161356564873705 0.171704079620443 0.171831488167934 0.175523430198052 0.163404526681657 0.165104152052439 0.169187841074845 0.17282882897739 0.159236291617313 0.163369528609969 0.175650644206517 0.160332599679921 0.168823262180724 5 5|0 +|/ 21089980 21091322 21090831.4 21089170 21091664 + gene protein_coding_gene TRUE TRUE AT5G51840.1 similar to ACI13 [Lycopersicon esculentum] (GB:AAY97863.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) 0.858925050167735 10.6333593511858 5.5878264980379e-07 3.0246250112588e-05 14.6332749598552 12.5077611975874 0.858925050167735 0.0246568564327939 AT5G38470_at 9.35968153448274 9.45135006451885 10.3799694947618 10.3156851206062 10.1111403812387 10.0045381636285 9.13282878155766 9.48630234463004 9.21485904721336 9.2473685260198 10.4131592945232 10.2798559810377 10.4113590619263 10.0882202439709 10.4383675034786 10.2946174323604 10.1221765763871 10.0170141514833 9.15105296457988 0.103348230432297 0.101777366835249 0.104689120825319 0.105076422591705 0.103845704524578 0.112742686344265 0.104082603068447 0.106184403698372 0.122904724784524 0.106071473271376 0.101787945217250 0.103965870140281 0.103574675615449 0.112475894436537 0.104710988150925 0.100061607583094 0.106134504795927 0.108494485020398 0.109206215903117 5 0|5 /|+ 15423701 15424457 15424035.143 15421872 15424941 + gene protein_coding_gene TRUE TRUE AT5G38470.1|AT5G38470.2 DNA repair protein RAD23, putative Identical to Putative DNA repair protein RAD23-4 (RAD23-like protein 4) (AtRAD23- 4) (RAD23-4) [Arabidopsis Thaliana] (GB:Q84L30;GB:Q94C35;GB:Q9FF16); similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT3G02540.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96879.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain UV excision repair protein Rad23; (InterPro:IPR004806); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Heat shock chaperonin-binding; (InterPro:IPR006636); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.949481021734885 10.6287241047359 5.61162229463761e-07 3.03371798393133e-05 14.6294629723027 19.5114485489699 0.949481021734885 0.066764837548512 AT5G63400_at 8.47879342888 8.6638055552908 8.97820881499507 9.20575051257561 8.92372743094754 9.07500647805313 7.95856949659656 8.2043484216237 8.28141735343885 7.99201502408653 9.30441449311686 9.7132488229479 8.95400135125495 9.16285274986844 9.55212259304809 8.90837507988879 8.98335197755821 9.14658758550295 7.75564266478972 0.143144472052530 0.138451102658534 0.140231289351674 0.140346615247225 0.138074901554856 0.144477949556267 0.149534466097354 0.144268070254174 0.157088443045491 0.148935663345343 0.139719193740767 0.141348567605920 0.143894145929517 0.141036059312979 0.142707574959495 0.138545942581272 0.145467826464944 0.142361906512198 0.157066977245853 5 5 - 25410524 25411429 25411013.909 25410227 25412133 - gene protein_coding_gene TRUE TRUE AT5G63400.1|AT5G63400.2 ADK1 (ADENYLATE KINASE 1); adenylate kinase encodes a protein similar to adenylate kinase. Identical to Adenylate kinase 1 (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ADK1) [Arabidopsis Thaliana] (GB:O82514;GB:Q9FMW2); similar to adenylate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G50370.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850)|Identical to Adenylate kinase 1 (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ADK1) [Arabidopsis Thaliana] (GB:O82514;GB:Q9FMW2); similar to adenylate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G50370.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) 0.962610867210824 10.6226772847334 5.64283028070771e-07 3.04679044755751e-05 14.6244872501671 17.2986817735803 0.962610867210824 0.0712046533891976 AT5G65080_at 0.864435835858436 0.762605658470202 1.52106521407739 1.17587931294219 0.978786985154578 0.984179435066766 1.26195763683188 1.25943472253319 1.88163118222504 3.52543119571598 4.62439128311575 4.49211563578304 4.16294952543937 2.7189329408505 4.01029578828715 4.59118178166161 4.44548426746291 4.56980420108874 1.97184511370357 0.534789594464447 0.535253487920831 0.534789594464447 0.534789594464447 0.534789594464447 0.542840971867659 0.540225777778995 0.542617314959885 0.534789594464447 0.541426093457834 0.538753835551242 0.54398890580179 0.536998477875518 0.534789594464447 0.534789594464447 0.537146395915708 0.536492116469498 0.535225735536842 0.534789594464447 5 5|0 +|/ 26014996 26019380 26018069.5 26014730 26019691 + gene protein_coding_gene TRUE TRUE AT5G65080.1|AT5G65080.2 MAF5 (MADS AFFECTING FLOWERING 5); transcription factor|MAF5 (MADS AFFECTING FLOWERING 5) Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported. similar to MAF4 (MADS AFFECTING FLOWERING 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65070.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.93506393539987 10.6135359080597 5.69036804353974e-07 3.06827695758563e-05 14.6169589517776 4.43180822937149 0.93506393539987 0.0622896157471788 AT5G64340_at 5.36664580385343 5.45631593710182 6.37075227200728 5.83457961542959 7.62719990656109 6.6130423998983 5.48326835581335 5.27996663340618 4.20514791068294 4.6580581537468 6.49535199525526 7.08977690160295 6.39231716542342 6.61176498672375 6.87382048268742 6.77993129180982 6.0736508384927 6.32088515211962 5.12963568280481 0.209696033917202 0.209696033917202 0.218539655769498 0.220234428887382 0.214285265991498 0.223369693138056 0.213381493476429 0.220567437949143 0.240535895108649 0.216474169952235 0.228528720421977 0.209696033917202 0.217222907055675 0.215136575641497 0.219588211454467 0.214248736729737 0.239631240208357 0.220779392621102 0.211454657725683 5 5 - 25748188 25748571 25748362.727 25747561 25750539 - gene protein_coding_gene TRUE TRUE AT5G64340.1 SAC51 (SUPPRESSOR OF ACAULIS 51); transcription factor/ transcription regulator Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation. similar to transcription factor/ transcription regulator [Arabidopsis thaliana] (TAIR:AT5G09460.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 1.56512556764161 10.6117918838780 5.69948679636677e-07 3.06827695758563e-05 14.6155218319540 11.6259553325968 1.56512556764161 0.20221264478366 AT5G27990_at 5.21977227062126 5.76402809587672 6.74341629069665 6.48157720668317 6.94507330408568 6.96975192590192 5.71820589911606 5.9078403716842 4.77261150790084 4.71457158748031 5.87700554558981 6.14933414029954 5.94692314150371 5.74934912316222 6.15872479322666 5.69965134256873 5.93355822907391 5.79655188876343 5.02373293468868 0.231056437263842 0.221981657437270 0.228955455178594 0.222486743191322 0.225946999405097 0.224783471270414 0.220271726065728 0.222878298615963 0.237814362026403 0.225651144453827 0.220498371391698 0.21922819488316 0.223546918639322 0.224998456887255 0.225981132276057 0.218338418101451 0.242346101337342 0.222409628345195 0.218338418101451 5 5|0 +|/ 10017371 10018219 10017645.4 10017040 10018445 + gene protein_coding_gene TRUE TRUE AT5G27990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22510.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79569.1); contains domain gb def: Hypothetical protein (PTHR21250:SF9); contains domain FAMILY NOT NAMED (PTHR21250) 1.10470414400876 10.6109575552234 5.70385475559993e-07 3.06827695758563e-05 14.6148342284080 11.5941378133566 1.10470414400876 0.109633151697446 AT5G62920_at 4.90220720488457 5.15864626958907 4.19027121634136 4.30045441054368 7.18181008586847 6.69836915870244 6.02970225354939 5.9616541671649 5.05435517934454 5.61997628352395 8.05541944423328 8.24267347317556 7.6715031495424 7.11678902230884 8.53138652470237 7.29550770135524 5.95689510192044 7.23084237901705 5.77864248387964 0.244597965277050 0.236559745174318 0.243232738079579 0.247065228005235 0.237124770844679 0.252082896311102 0.241926477956888 0.242914013178225 0.248796744319716 0.239294951095459 0.239626336122561 0.236559745174318 0.237241285481867 0.240944907962498 0.243826933135363 0.236559745174318 0.246098623656878 0.236559745174318 0.250961087514676 5 5 - 25269997 25271360 25270921.364 25269612 25271438 - gene protein_coding_gene TRUE TRUE AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Identical to Two-component response regulator ARR6 (ARR6) [Arabidopsis Thaliana] (GB:Q9ZWS6;GB:Q9ZWS8); similar to ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5), transcription regulator/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G48100.1); similar to Response regulator receiver [Medicago truncatula] (GB:ABE82371.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 1.05398809734143 10.6061611227997 5.72903616926087e-07 3.07482120819657e-05 14.6108800946941 12.0513652200545 1.05398809734143 0.0973187488169138 AT5G16550_at 7.93361772894173 8.67595242525955 8.95499492547684 9.06086665750395 9.65915389517641 9.07966242345366 8.50290777685377 8.72331317667935 6.42171584127641 7.10681831420933 8.82121534869521 8.32232743192003 8.86591858485369 8.88242332451557 8.12028307170496 8.4133844246295 8.6963061074615 8.98442024575512 6.27532975297532 0.254316146670727 0.254316146670727 0.265976291307130 0.259904898882724 0.254316146670727 0.264926610705201 0.267804101550564 0.261932938280550 0.343176791230299 0.265863383390642 0.260858875016559 0.261484228253009 0.259399643896959 0.254316146670727 0.26595547327901 0.254316146670727 0.280092992686034 0.274186995460448 0.277762102416248 5 5|0 +|/ 5405683 5406588 5406084.2 5405353 5406890 + gene protein_coding_gene TRUE TRUE AT5G16550.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26450.1); similar to Os08g0425800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061840.1) 1.38335927321202 10.6059392291460 5.73020403704617e-07 3.07482120819657e-05 14.6106971180714 16.4435950196326 1.38335927321202 0.168375921082306 AT5G13310_at 5.08485753783882 4.95149625998503 5.6368484758433 5.9730595014718 6.22530158927216 6.75661770088452 4.8801501757823 5.05385225761132 4.39329158591522 3.97359000974168 5.50487943486113 5.1074586594704 5.00265113793271 5.4935859861068 5.57343710574768 5.48126241730199 5.46513179608008 4.75467674767226 4.22560353740279 0.242674674937796 0.237005045774092 0.251494008620972 0.236443944179261 0.246293926955486 0.252532345665479 0.236105095845746 0.241193106163604 0.242154350391515 0.238557967280572 0.234114470617676 0.234099158386289 0.232927121400583 0.235908740298468 0.252522411118401 0.234091806117865 0.235590536975855 0.239898088951880 0.236973135851300 5 5 + 4264423 4264943 4264642.273 4263496 4265340 + gene protein_coding_gene TRUE TRUE AT5G13310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13970.1); similar to OSJNBa0039C07.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE05150.2); similar to hypothetical protein MA4_111B14.56 [Musa acuminata] (GB:ABF72009.1) 1.12787906267849 10.6037416555383 5.74178425393382e-07 3.07722669101603e-05 14.6088847311832 10.3179631648361 1.12787906267849 0.11522014188167 AT5G12850_at 6.36468654318076 6.41707084923753 6.93589175766421 7.1626612754011 7.32029568351971 7.13201136998107 6.65648202396029 6.89608330445237 6.94457142059448 6.15126221639437 8.0212321590167 8.36832100937803 7.7166925237768 7.80675509133722 8.11427653746883 7.82672053493494 7.31454779242576 7.66216552152213 6.4560787453603 0.195872156211440 0.186198404675647 0.187288930758571 0.189672946198537 0.180976173469355 0.188871058567855 0.180976173469355 0.188529111894245 0.187938357957089 0.181173676165172 0.189354143166558 0.186495347546467 0.185918710401089 0.189021881253871 0.185638809653309 0.183349489958733 0.198487890621865 0.192978376787427 0.190758349524545 5 5 + 4058596 4059164 4058838.455 4056190 4059583 + gene protein_coding_gene TRUE TRUE AT5G12850.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G41900.1); similar to Zinc finger, CCCH-type [Medicago truncatula] (GB:ABE84364.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.945334555108315 10.5959577620926 5.78300682179533e-07 3.09188584743997e-05 14.6024617221554 14.0462193627658 0.945334555108315 0.066356543443613 AT5G49570_at 8.90248618271588 9.05587235407911 9.35659157447072 9.59441419356468 9.10628840278335 8.90849410787244 7.03621551500395 7.31766101881919 8.11660681044701 6.50877778807091 7.79878057624084 8.19590171569227 7.66323106244034 8.05014990436007 7.44865355032306 8.32379503884302 7.9423678833334 8.48032574485959 6.95286029660944 0.181500231917472 0.178395473899451 0.181155071349057 0.172628337451620 0.172177082374485 0.177951692585960 0.179462169011638 0.186532853591788 0.185206588764312 0.196821841902612 0.173176726328982 0.179492289992643 0.178460520751727 0.180209798775374 0.182867186616266 0.171146768239959 0.180151387542937 0.177274772347891 0.180768310510819 5 5|0 -|/ 20129554 20130191 20129940.889 20129085 20133411 - gene protein_coding_gene TRUE TRUE AT5G49570.1 transglutaminase-like family protein Identical to Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) (AtPNG1) (PNG1) [Arabidopsis Thaliana] (GB:Q9FGY9;GB:Q84WJ1); similar to Os07g0497400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059707.1); similar to N-glycanase 1 [Gallus gallus] (GB:NP_001026159.1); contains InterPro domain Transglutaminase-like; (InterPro:IPR002931) 0.979270344077026 10.5958839792960 5.78339910173236e-07 3.09188584743997e-05 14.6024008132072 16.2500774101073 0.979270344077026 0.0770863002245348 AT5G02850_at 4.90376548672169 4.72436290318619 5.49587114285329 5.54554588626769 6.05476413603698 6.2014119803191 4.53162004935160 4.33638390437345 4.55666449557702 4.25394706047777 5.39228816928078 5.24548041393589 5.44077660072527 4.67464079149925 5.35732505719197 5.11944273675161 5.16754293530008 5.20591951505067 4.93834512132954 0.250115482277727 0.238374071535794 0.247066628470207 0.248080824951741 0.240844567362183 0.236913159270979 0.243132546458996 0.246433038254846 0.243240396348396 0.236269845092317 0.241325214207762 0.236387146396969 0.236254856772390 0.254099577741981 0.236130346729217 0.239764422297550 0.252327801877749 0.24012161389998 0.249935021464044 5 5 + 652859 653262 653081.273 652108 653671 + gene protein_coding_gene TRUE TRUE AT5G02850.1 hydroxyproline-rich glycoprotein family protein similar to Os09g0540500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063809.1); similar to hypothetical protein LOC_Os11g05150 [Oryza sativa (japonica cultivar-group)] (GB:AAX92744.1) 0.908903334399932 10.5927704014861 5.79997939667579e-07 3.09693124692054e-05 14.5998300593337 10.1159219794363 0.908903334399932 0.0531352811371864 AT5G47310_at 8.74104398832768 8.84047090846003 9.74268026613282 9.69763221456392 10.1792793200527 9.72813055016958 9.20346052995103 9.13066250515099 8.57365463180648 8.45511848227805 9.95259604238007 9.71283648691911 9.6357385664731 9.61857974948038 9.4157553557773 9.71401277948495 9.6740292658766 9.2922931189864 8.46815375114344 0.129480989473001 0.126220183401243 0.133776030600001 0.129512918817942 0.134067061578062 0.126924616609082 0.134893946682685 0.126671434397919 0.145636867829063 0.138188711546676 0.122222763907652 0.122222763907652 0.130309237977802 0.126857900897747 0.131036640444028 0.122222763907652 0.13641117394525 0.131316709532965 0.133594954593293 5 5|0 +|/ 19218696 19219866 19219454.1 19218009 19220148 + gene protein_coding_gene TRUE TRUE AT5G47310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17486.1); similar to hypothetical protein 25.t00041 [Brassica oleracea] (GB:ABD64953.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic; (InterPro:IPR008580) 0.993012826843453 10.5890241855835 5.81999707165491e-07 3.10379738520162e-05 14.5967358154472 18.4708979315585 0.993012826843453 0.0813080361694064 AT5G23810_at 3.58272692787135 3.45391988221124 5.11202257132065 4.94223680878976 6.04349128017562 5.74809534223817 3.62547819966141 2.58880092622427 2.65097760011709 2.59529196617713 3.11912888920626 3.65618741885946 2.48842422740776 2.92490114338886 3.51967174081723 3.1092285770625 3.64976251886376 3.34340638894661 1.90456647657071 0.27332556841973 0.27332556841973 0.279926694201082 0.275495962705189 0.280572214150436 0.290558535370208 0.27332556841973 0.27332556841973 0.279066059443995 0.27535632280825 0.277177700375999 0.276371644202848 0.276087315828753 0.285565899723252 0.27332556841973 0.27332556841973 0.281574067816631 0.275561397619777 0.276499789504683 5 5 + 8029864 8030649 8030244.909 8028381 8030819 + gene protein_coding_gene TRUE TRUE AT5G23810.1|AT5G23810.2 AAP7 (amino acid permease 7); amino acid permease|AAP7 (amino acid permease 7) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to Os02g0722400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047966.1); similar to amino acid permease AAP4 [Vicia faba var. minor] (GB:CAC51425.1); similar to Os04g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053053.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057)|similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to Os02g0722400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047966.1); similar to amino acid transporter [Pisum sativum] (GB:AAX56951.1); similar to Os04g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053053.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.49572843270986 10.5858291847418 5.83712867540732e-07 3.10700290809634e-05 14.5940958660609 7.19207193099024 1.49572843270986 0.190153689076018 AT5G13470_at 4.64280645946103 4.55899881886429 5.40361338406751 5.4982749032975 5.98473197383359 5.81604462523093 4.19536686498667 3.94745750015797 4.17838651501665 3.88293273453461 4.81888893760722 4.5404624400245 4.62265633053324 4.35353643490792 4.88212052837925 4.52347183040173 4.76232047956257 4.16192212168047 4.20877441703335 0.240555075579374 0.242646631952736 0.254368203428437 0.250198648056511 0.251567055714956 0.250344025985243 0.251305801380035 0.239673818563967 0.239255251184966 0.245420792269310 0.238610332180407 0.239624579320246 0.238610332180407 0.239290203286406 0.243517274647490 0.238610332180407 0.245607238332496 0.241076872107320 0.249863890458996 5 5|0 +|/ 4318574 4319688 4319030 4318527 4319927 + gene protein_coding_gene TRUE TRUE AT5G13470.1 similar to Os01g0939400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045348.1) 0.91632498821607 10.5850856731322 5.84112324023472e-07 3.10700290809634e-05 14.5934813902312 9.34251362127843 0.91632498821607 0.0563156673135217 AT5G04550_at 8.10492808437783 8.69200090455743 9.30075215539128 9.47484933330355 9.60162106301349 9.3714164664754 8.53312954642338 8.45113319131688 8.20774619006422 7.84358846852366 9.63533522864223 9.62141283602964 9.54252515823647 9.26450381184741 9.15528540415538 9.45402400746438 8.75037664317596 9.45340979896937 8.27806083556282 0.199988589085729 0.182275826627422 0.193785817624698 0.183733086115442 0.180941256522815 0.181284795865592 0.183029443751552 0.191433937830227 0.193905672879187 0.184675478048138 0.177594647304181 0.17639122072546 0.179565609142239 0.188169668770698 0.190626129700884 0.177382629823757 0.188161292191476 0.182426984089929 0.185017601621942 5 5 - 1303846 1304270 1304032.818 1303181 1306117 - gene protein_coding_gene TRUE TRUE AT5G04550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23160.1); similar to Protein of unknown function DUF668 [Medicago truncatula] (GB:ABE80130.1); contains InterPro domain Protein of unknown function DUF668; (InterPro:IPR007700) 1.12083621794596 10.5832214706898 5.85115185461731e-07 3.10700290809634e-05 14.5919405013396 17.6759326476651 1.12083621794596 0.114095647509896 AT5G42440_at 3.97741266411730 4.03531035308415 5.10995313031314 4.9971779253137 4.70573885566111 4.96574727110008 3.09108143609615 2.6864646894917 3.37590380348572 2.64665188383802 3.40011022445099 3.6371277115101 3.45854238373172 3.69285167877978 3.25052307072038 3.47809610333586 4.05521357888107 3.33778627307688 3.02936072637301 0.223311784045774 0.221470702494261 0.234790229694161 0.245337926250319 0.241932126912773 0.225600641418101 0.231781964487359 0.222549255055736 0.221571704993725 0.229674017045281 0.221148466743020 0.223342046704953 0.227569481476793 0.223104174211929 0.223001507220792 0.221822128055924 0.226793455453801 0.221673660511017 0.221452127692086 5 5 - 16990837 16991190 16991030 16990532 16991802 - gene protein_coding_gene TRUE TRUE AT5G42440.1 protein kinase family protein similar to ATPSKR1 (PHYTOSULFOKIN RECEPTOR 1), ATP binding / peptide receptor/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G02220.1); similar to Serine/threonine protein kinase, active site [Medicago truncatula] (GB:ABE86024.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.00928145836414 10.5825679282704 5.85467206151126e-07 3.10700290809634e-05 14.5914002310030 7.47415421529371 1.00928145836414 0.0860743831861363 AT5G54940_at 12.3948870527363 12.2899429467474 13.4227424093912 13.2810068698996 13.1793700073336 13.0679491273363 12.5835794963025 12.3655552552590 12.0530519039269 12.3559015798469 13.4449694744771 13.0676435103794 13.3458541680587 13.1675616652374 12.9753947521305 13.5109461894252 13.2862544719373 12.9095096238627 12.2898081745347 0.0590517085236939 0.0574603702661017 0.0584054630824606 0.0602746426153379 0.0600728923212534 0.0607865688324224 0.0587878151817518 0.0587231598597488 0.0631807042564151 0.0599010621225136 0.0591515710227705 0.0573279689061144 0.0592964594074537 0.0581242528870618 0.0599534999218908 0.0573279689061144 0.0620073327998312 0.0603672438894164 0.0585324730482186 5 5 - 22325689 22325954 22325832.818 22325497 22326636 - gene protein_coding_gene TRUE TRUE AT5G54940.1|AT5G54940.2 eukaryotic translation initiation factor SUI1, putative similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT4G27130.1); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.1); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT1G54290.1); similar to putative translation factor [Pinus pinaster] (GB:CAC84489.1); similar to Os05g0498400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055949.1); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874) 0.904936047448977 10.5727766161015 5.90768786414909e-07 3.1246894331034e-05 14.5833013797787 25.5463477879798 0.904936047448977 0.0522187711516385 AT5G25820_at 2.91738279390786 3.14606131274281 4.77624891810936 4.7147120990727 3.47858649564218 3.77027977200757 1.89252907120903 1.72951671073195 2.27821012017261 2.16006298126307 2.07715278342908 1.78343630776497 2.42648470340675 2.45031254520233 2.293440050109 2.28796807946632 2.81816656348842 2.43272187794272 2.07474802164069 0.246233269554297 0.255272312887555 0.269678840988136 0.274585129613358 0.254936548899044 0.263981728507780 0.244138312853387 0.249562451966386 0.248673148748156 0.244396149633609 0.248688474036122 0.245690226051204 0.249104274124007 0.245989032898354 0.253744717111398 0.246711272605414 0.247754913440621 0.244138312853387 0.248688169683002 5 5 - 8997256 8997793 8997578.818 8997186 9000318 - gene protein_coding_gene TRUE TRUE AT5G25820.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G32790.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE81272.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.956893835942891 10.5709528086701 5.91762051136873e-07 3.1246894331034e-05 14.5817918762131 5.54927334911626 0.956893835942891 0.0708761093666106 AT5G60800_at 6.55262755245416 6.92789055620354 8.61239417487512 8.63789243851985 6.74000702172104 6.85565492644946 5.16115357426713 5.19448279271247 7.39023711514576 6.70741277789956 7.30702133144982 8.27292974802426 6.51718526651403 6.93792133885756 8.41324189422253 7.75915437720052 5.91674663812968 6.70681441371275 7.15198227614127 0.265482470642124 0.264774667119925 0.28980252264062 0.285207662314749 0.265217000367612 0.265131989870501 0.298536085557473 0.287688037811903 0.270327189571364 0.268006044372848 0.264774667119925 0.273470372696224 0.268233519398102 0.264815328546068 0.269080107962812 0.270919495005474 0.289763426523531 0.272330458789409 0.264774667119925 5 5 - 24478316 24479117 24478637.364 24478113 24479762 - gene protein_coding_gene TRUE TRUE AT5G60800.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36950.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53965.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.94905733721687 10.5707669522461 5.91863372321642e-07 3.1246894331034e-05 14.5816380324415 13.9913066791884 0.94905733721687 0.0683418608406557 AT5G66400_at 8.46769934058434 8.47338124651754 8.94103055616946 8.8514106558279 9.27165824633642 8.83935233249972 8.22221893962064 8.16491593290815 8.05686925586063 6.84384475029766 8.93688280837148 8.79347942188397 8.60199237785875 8.49179938412755 8.82811693818988 8.51323067688912 9.05172674740109 8.94685580502027 7.48129498100636 0.136081562374572 0.124069447071486 0.125361764768129 0.130608572338292 0.133496038989014 0.131654747203534 0.124553582686992 0.124069447071486 0.135330749739028 0.147845052370395 0.124069447071486 0.131637413028114 0.126990484850449 0.125018428863403 0.127840450287483 0.126507000349826 0.126971205235446 0.127930362157121 0.141506742732294 5 5 - 26535812 26536344 26536098.455 26535503 26536468 - gene protein_coding_gene TRUE TRUE AT5G66400.1|AT5G66400.2 RAB18 (RESPONSIVE TO ABA 18) Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. Identical to Dehydrin Rab18 (RAB18) [Arabidopsis Thaliana] (GB:P30185); similar to dehydrin, putative [Arabidopsis thaliana] (TAIR:AT3G50980.1); similar to hypothetical protein [Plantago major] (GB:CAJ38406.1); contains InterPro domain Dehydrin; (InterPro:IPR000167) 0.97682497019013 10.5707208702519 5.91888497222197e-07 3.1246894331034e-05 14.5815998873157 16.769548497486 0.97682497019013 0.0770503514273594 AT5G01610_at 6.02287965089627 6.45382831898665 7.2640285305884 7.19484737110515 6.75689220908532 6.01737809197669 4.45881908062597 4.48101302954628 3.29464262677069 3.76845922472825 5.07242457284106 4.84422658006008 3.97920916057051 4.94487691135364 4.25766937781643 4.92609528440948 4.60448595947601 4.26464140403435 3.45873456930276 0.229523296674906 0.222025687358488 0.227881413003336 0.221102649324841 0.224521264340997 0.235877217430076 0.221767595093185 0.222335394019178 0.235449315160490 0.229954286093558 0.221670544748326 0.220822284139865 0.226003441028105 0.226121571915400 0.223890274784708 0.226301314769122 0.235113154206523 0.228410027627216 0.220804459861434 5 5|0 +|/ 231092 231965 231563.5 230984 232202 + gene protein_coding_gene TRUE TRUE AT5G01610.1 Identical to Protein At5g01610 [Arabidopsis Thaliana] (GB:Q9M015;GB:Q84VV4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.2); similar to Protein of unknown function, DUF538 [Medicago truncatula] (GB:ABE91533.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.27928819003070 10.5697769676515 5.92403388379155e-07 3.1246894331034e-05 14.5808185146549 10.1407020169784 1.27928819003070 0.148653501730530 AT5G10070_at 7.58423776723261 7.24585234669127 8.58566331361211 8.41109385321514 8.67328593317042 8.31544243306465 8.21337514907466 7.8495858828734 6.73429231985574 6.36327204351829 7.5687746470093 7.802421450632 7.91352745311708 7.93250188820429 8.0185512326794 7.80634379648363 8.06866940546229 7.6119985732419 6.12769276164469 0.159613008405271 0.158609655769215 0.166853922165288 0.156118252937188 0.161708609340993 0.171804630345997 0.160299984076787 0.160508496143489 0.180984847226499 0.178625300209487 0.158008279688419 0.159757523315096 0.165573365705413 0.161963668827976 0.159763400811543 0.157276109779752 0.163203241084192 0.162402735894653 0.165749944097895 5 5|0 -|/ 3148732 3149512 3149191 3148523 3150435 - gene protein_coding_gene TRUE TRUE AT5G10070.1|AT5G10070.2 RNase L inhibitor protein-related similar to 80A08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67589.1); contains InterPro domain Possible metal-binding region in RNase L inhibitor, RLI; (InterPro:IPR007209); contains InterPro domain Protein of unknown function DUF367; (InterPro:IPR007177) 1.10251905548921 10.5677534772848 5.93508826374594e-07 3.12671638237441e-05 14.5791431789704 15.2342008836301 1.10251905548921 0.110182124162897 AT5G15400_at 7.91607398965452 8.15116894672455 9.00577800191971 8.8521648250185 9.17448271047209 8.71871046326133 7.78979877414567 7.70445138027719 7.93522194901378 7.91477097985317 9.10256354482212 8.71773446726353 8.87354443773643 8.91692965912684 8.73082570285433 8.9914989602277 8.73504109844018 8.7361443044005 7.63844255706754 0.174842251809421 0.171107107963598 0.175624605880447 0.170110572727731 0.167420173747282 0.185775670169536 0.169736477841603 0.178499934842073 0.185800074716472 0.178253765568114 0.169584064835482 0.172677936035387 0.173424943280075 0.174597255150338 0.169000306166146 0.169556914126439 0.180433168480293 0.177951717725423 0.178317090337005 5 5|0 -|/ 4997844 4998710 4998258.9 4997614 5003143 - gene protein_coding_gene TRUE TRUE AT5G15400.1 U-box domain-containing protein similar to Os03g0427900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050414.1); similar to Ubiquitin fusion degradation protein-2 (ISS) [Ostreococcus tauri] (GB:CAL57913.1); contains InterPro domain U box; (InterPro:IPR003613) 1.03423375200744 10.5434378868949 6.06969208470137e-07 3.19374759596821e-05 14.5589825460247 16.7540855200194 1.03423375200744 0.0938140115931274 AT5G59290_at 5.95041556994223 6.54355004775902 7.27220188064463 7.71291958437838 7.56061207876217 7.38252692819626 7.06544436088415 7.30860025500767 7.2008139674518 6.86632390115976 9.13688069957436 9.05961474754862 8.3647614774324 8.75477406134715 9.19813467915258 8.59128884884459 8.78826712581077 8.71477785156664 7.35896279999174 0.159214953184785 0.157593370512727 0.157768428657442 0.150816390951125 0.156487993561084 0.163215680324645 0.156656557512482 0.147131029020438 0.180861486531099 0.149903300677351 0.150885481548175 0.15062163146668 0.150881870375382 0.163608456281224 0.148450130009935 0.148561192106427 0.153400880172992 0.149214085609102 0.148647368277266 5 5|0 -|/ 23933047 23934047 23933486.4 23932756 23935418 - gene protein_coding_gene TRUE TRUE AT5G59290.1|AT5G59290.2 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic|UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. similar to UXS5 (UDP-Xyl synthase 5), catalytic [Arabidopsis thaliana] (TAIR:AT3G46440.2); similar to UXS6 [Arabidopsis thaliana] (TAIR:AT2G28760.3); similar to UDP-glucuronic acid decarboxylase 3 [Populus tomentosa] (GB:AAX37336.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 1.22454571990282 10.5370791849815 6.10543650649454e-07 3.20866157148621e-05 14.5537016427759 15.0835818345022 1.22454571990282 0.138105831040457 AT5G60840_at 7.4718643661366 7.63534783999991 8.37293748202608 8.54959963116007 8.80437327030746 8.59542007384619 8.101419939808 8.10397324078371 8.03075881121736 7.68850372822078 9.54625866528694 8.99606864257158 9.24566420401056 8.86475512663765 8.90226206316418 8.52091074643573 8.74482141697199 9.196798821593 8.09103189471434 0.146853219106796 0.137564328496895 0.137927117213769 0.135813883385856 0.141669114140686 0.13893982438319 0.137156102489214 0.138689899068634 0.143355112379669 0.148134816024749 0.143512467486975 0.132905702465840 0.139128669693842 0.139096206668744 0.135216385589236 0.138065838889759 0.135738003656077 0.133767240713525 0.143071721057435 5 5|0 -|/ 24490754 24491586 24491164.75 24490545 24491717 - gene protein_coding_gene TRUE TRUE AT5G60840.1 unknown protein 0.908929458551343 10.5338836814078 6.12348579917476e-07 3.21425116569406e-05 14.5510464043227 16.6738456166176 0.908929458551343 0.055161922310631 AT5G56130_at 5.5840278086001 5.23687260417535 6.15273503282208 6.33527901269547 6.53125666854942 6.33505749318795 5.59291091766254 5.9920336811461 5.33819317681786 4.91765536874412 6.31820974525906 6.43310286278661 6.36507640614975 6.6532386740728 6.72571850247008 6.38902191822445 6.49405523284556 6.27169336316839 4.92080035281714 0.180456871302504 0.177540805407192 0.191199766901562 0.185841555884334 0.178556145178591 0.180045742360551 0.185784251484839 0.188556618880110 0.202913923905444 0.177700206590047 0.175379002312888 0.176688903427459 0.186475745274433 0.180741113862998 0.177992553759498 0.179900782428954 0.188106352286270 0.186594451197183 0.190051858786171 5 5|0 -|/ 22740185 22740931 22740580.222 22739711 22742314 - gene protein_coding_gene TRUE TRUE AT5G56130.1 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G67320.1); similar to Os09g0298400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062809.1); similar to THO complex 3 [Danio rerio] (GB:NP_001003758.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 1.06725121045671 10.5282010587819 6.15572655307953e-07 3.22726741023773e-05 14.5463222762143 11.7275954294791 1.06725121045671 0.102618955095524 AT5G02800_at 7.64676662932403 7.70014481464957 8.42166967696332 8.3121571082725 9.08988606335005 8.8666268501311 7.76100908378093 7.97029930625242 7.61591860518088 7.24881165561626 8.52984027973582 8.0562336384849 8.33675688661186 8.44213066009733 7.908890327015 8.42442292052255 7.93096587840662 8.19611717266291 7.05065838804127 0.16608714068436 0.156904952611523 0.153415586978271 0.154700286323071 0.156530077714363 0.151254720339449 0.16254006257386 0.160003652270926 0.160210729335517 0.163916710504425 0.151254720339449 0.151254720339449 0.157011865116884 0.153997319193235 0.160421791425497 0.156658451261885 0.180267165832768 0.153992526757672 0.156496796011845 5 5|0 -|/ 635552 636110 635811.9 635226 637501 - gene protein_coding_gene TRUE TRUE AT5G02800.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to protein serine/threonine kinase BNK1 [Brassica napus] (GB:AAG16628.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.913035068503414 10.5265048472709 6.16538582936921e-07 3.22842770432678e-05 14.5449116035279 15.9877195766180 0.913035068503414 0.0570002519436837 AT5G55940_at 8.29476862364256 8.51868565160873 9.01624452838508 9.08024176613832 9.13861608262046 8.81044726612753 7.80567452663965 7.8498760428669 6.92136405345102 7.36080788842265 8.11784832049016 8.274749512312 8.14944482130575 8.05234498119102 8.69060391356617 8.1172008113578 8.2403334230277 8.19368269740656 7.39173134300375 0.176608227772279 0.174899719079887 0.178605005199493 0.179346028216075 0.171955097998163 0.190767057290774 0.168518815490665 0.166607519555440 0.202965980691019 0.185411469782536 0.177275383366827 0.170037024966431 0.172745692412563 0.171453950708909 0.173313441533067 0.166607519555440 0.180032926449139 0.166607519555440 0.182068292253328 5 5|0 -|/ 22673677 22675067 22674777.25 22673224 22675274 - gene protein_coding_gene TRUE TRUE AT5G55940.1 EMB2731 (EMBRYO DEFECTIVE 2731) Identical to UPF0172 protein At5g55940 [Arabidopsis Thaliana] (GB:Q9FG71); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51620.3); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366) 0.949513915709033 10.5174775310001 6.21707072481314e-07 3.25156484712136e-05 14.5373995794719 16.2913995551910 0.949513915709033 0.0700568002828906 AT5G07830_at 10.2955918718088 10.3820251330956 11.3291748294150 11.2818964572384 11.2550963808570 11.0904923800781 9.28613520464804 9.25620031242237 9.83978629477666 9.48179928566363 9.6973267957007 9.28605270903796 9.72207649062551 9.76141938539164 9.36226732590201 10.0500230810781 10.079860371835 9.89308084690881 9.00304589754047 0.0845375942260263 0.086144986788321 0.0836080249185066 0.0857563063049616 0.0887462616254913 0.0852472090792791 0.0863415356047018 0.0850237706332795 0.0908625882822842 0.0868853496821197 0.0860337786189123 0.0856758964615436 0.087751605600151 0.0855211142639703 0.085661596150546 0.0847745594514788 0.0876679041660526 0.085509005095101 0.0918704635173784 5 5|0 +|/ 2505821 2506535 2506259.667 2503324 2506689 + gene protein_coding_gene TRUE TRUE AT5G07830.1 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 1 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FF10;GB:Q9SDA1); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Os03g0211700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049350.1); similar to putative heparanase [Hordeum vulgare subsp. vulgare] (GB:CAD42650.1); similar to Os12g0578400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067122.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 0.86207321560992 10.5148206601225 6.23237185340933e-07 3.25564023841786e-05 14.5351872826409 20.1086051720972 0.86207321560992 0.0335995904511835 AT5G57860_at 5.99402059334258 6.08266643462161 7.35633535926351 7.12938644980132 7.5727883431487 6.8445704658073 6.11479752705179 5.43728267043561 4.87736754199382 4.99134621394427 6.60127714566961 6.6373062278117 6.69172022702844 6.59557255185355 6.16452255707871 6.87782800865933 5.99537498791857 6.48501246817601 5.10990861264594 0.168636005982523 0.169004590695064 0.169160738400718 0.168158447954674 0.1719408678689 0.182284428914111 0.163953874000077 0.169268475136939 0.168571116074406 0.176324928609336 0.166525021783342 0.173499054822097 0.167270836204449 0.169904426551545 0.176011747237752 0.172282307826648 0.177927078472575 0.177001149074915 0.177370721012573 5 5 + 23455499 23456269 23455656.364 23454823 23456538 + gene protein_coding_gene TRUE TRUE AT5G57860.1|AT5G57860.2|AT5G57860.3 ubiquitin family protein similar to ubiquitin-like protein [Cucumis sativus] (GB:AAL35978.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.41589049852773 10.5045720324621 6.2917789069807e-07 3.2767058317408e-05 14.5266475927497 12.3159564277520 1.41589049852773 0.177217739414918 AT5G18900_at 7.52680809981436 7.89935040170443 8.38556694420237 8.495850231541 8.14683395893212 8.06121569319787 6.83912001349456 7.43770895052695 6.01521138272569 6.51463328466671 8.07323385763116 8.00086759696694 7.82186213325072 8.18646124804862 7.88885184724239 8.19656340491436 7.0590120106094 7.37364820491012 6.54008436192436 0.193857501527402 0.198802861339936 0.193626511467252 0.201237905891663 0.194799782109629 0.197664036306059 0.198645450862691 0.199129765611067 0.206770725426545 0.207562926065897 0.193882262401619 0.193201126689860 0.194180561460236 0.200238818007344 0.197731846674115 0.190588015280028 0.219703287476736 0.196061601692847 0.192676791665012 5 5 - 6304428 6305258 6304830.545 6304217 6306292 - gene protein_coding_gene TRUE TRUE AT5G18900.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to AT-P4H-2 (A. THALIANA P4H ISOFORM 2), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygenase [Arabidopsis thaliana] (TAIR:AT3G06300.1); similar to prolyl 4-hydroxylase [Dianthus caryophyllus] (GB:AAT84604.1); similar to Os05g0489100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055890.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain Metridin-like ShK toxin; (InterPro:IPR003582); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.15751968437886 10.5040022582415 6.29509965445053e-07 3.2767058317408e-05 14.5261725490828 14.9399095605362 1.15751968437886 0.124381572177488 AT5G11030_at 5.42560033611839 5.503795750748 6.76111308522423 6.91863130137723 6.80777089073723 6.57029671035027 5.28624765330292 4.78577842849206 4.58049068390002 4.27319227198641 5.23958505674687 5.18966244743537 4.88665668066978 5.30533586411497 4.71393572535052 5.48481660554815 5.15731583783208 4.89549448425508 4.67744018365374 0.265741876387789 0.267543592950707 0.280266805630321 0.264783477508831 0.275732772149295 0.286859421786324 0.266101567511909 0.272216962690071 0.267736643606915 0.27140495181971 0.264783477508831 0.264783477508831 0.265681928143074 0.279435683027506 0.264783477508831 0.265807589163437 0.274878692687027 0.273490305293041 0.266200767110573 5 5|0 -|/ 3491060 3492262 3491584.556 3490834 3495133 - gene protein_coding_gene TRUE TRUE AT5G11030.1 ALF4 (ABERRANT LATERAL ROOT FORMATION 4) alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus. Identical to Aberrant root formation protein 4 (ALF4) [Arabidopsis Thaliana] (GB:Q84VX3;GB:Q9FY62); similar to Aberrant root formation protein 4 (GB:Q84VX3) 1.05641170632714 10.5016574345614 6.30878576647714e-07 3.2767058317408e-05 14.5242172667866 10.8171416283392 1.05641170632714 0.100578849926277 AT5G06140_at 7.24152777349532 7.207549501054 7.93616010228433 8.1106563438714 8.43817504515316 8.04339220778563 7.32096964134857 6.95488122609242 6.86490039285381 6.91025156294597 8.20812011971519 8.11184190043117 7.9160640873314 8.15947118391346 8.02939356607348 8.04208325289573 7.8531938179063 7.76691400419108 6.82984226855988 0.16291609754866 0.165382905133201 0.168547689255577 0.172327856119167 0.163736645511498 0.166636137782837 0.164018119399086 0.169035261517267 0.174661925625658 0.165799186818349 0.166995000970137 0.168803182455494 0.158930407419949 0.163019901067522 0.171362523209206 0.158930407419949 0.164988760235473 0.162398080314361 0.167069627714343 5 5|0 -|/ 1856220 1857304 1856706.444 1856009 1858786 - gene protein_coding_gene TRUE TRUE AT5G06140.1 phox (PX) domain-containing protein Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07120.1); similar to sorting nexin 1 [Brassica oleracea] (GB:CAD29576.1); contains InterPro domain Phox-like; (InterPro:IPR001683) 1.04670886135670 10.5014712572130 6.30987381842381e-07 3.2767058317408e-05 14.5240619974721 15.0962723049742 1.04670886135670 0.0981202665338477 AT5G61310_at 6.45926709959354 6.48114597903573 7.23587483744451 6.94408319567219 7.30399428925128 6.85975828208986 6.24988337314282 6.36363126683777 5.44561733363127 5.74967843918541 6.51412131005128 7.18453433719429 6.72841942317354 6.95492890924558 6.78153994623176 6.80839974045879 6.95050721301405 6.37532418811044 5.07070314205773 0.212107026179730 0.204954916640244 0.208030179383777 0.200801984423199 0.203825046855871 0.211624791204458 0.205261245648128 0.208288237173207 0.219632734564651 0.206108314868954 0.200801984423199 0.200949537318387 0.200801984423199 0.212667621897130 0.210112417530857 0.20171656190536 0.209657226928866 0.210916001960855 0.207863084779544 5 5 - 24670770 24670937 24670858.182 24670635 24672086 - gene protein_coding_gene TRUE TRUE AT5G61310.1|AT5G61310.2|AT5G61310.3 cytochrome c oxidase subunit Vc, putative / COX5C, putative|cytochrome-c oxidase Identical to Probable cytochrome c oxidase polypeptide Vc-3 (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c-3) [Arabidopsis Thaliana] (GB:Q9FLK2); similar to cytochrome c oxidase subunit Vc family protein / COX5C family protein [Arabidopsis thaliana] (TAIR:AT2G47380.1); similar to Os12g0561000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067021.1); similar to Cytochrome c oxidase polypeptide Vc-2 (Cytochrome c oxidase subunit 5c-2) (GB:Q8VY39); contains InterPro domain Cytochrome c oxidase subunit Vc; (InterPro:IPR008432) 1.03133398330274 10.5013665724139 6.31048570364949e-07 3.2767058317408e-05 14.5239746904332 12.8418155512467 1.03133398330274 0.0941368477071357 AT5G07460_at 8.72478158330603 8.5726131979216 8.5881322468063 8.91496105784073 9.11515905873602 8.65460348704294 8.7784154707583 8.94684890975463 6.48588475834681 8.03855725321407 9.1494197112961 9.11928823459614 9.34432906894458 9.4941265721764 8.98084721906113 9.11372874273946 9.09004622122967 9.48822552984405 6.87990680429055 0.168194998270143 0.162155223919725 0.171941411926821 0.168563792028135 0.172678925590312 0.185686098565792 0.167231259386221 0.167543925520091 0.201497124523923 0.181879655162435 0.168569294017994 0.166259628098398 0.165006466743760 0.164492734305552 0.163608431893924 0.16924662319251 0.176341576241524 0.167567246251274 0.205978810191196 5 5 - 2360859 2361800 2361456.909 2360635 2362014 - gene protein_coding_gene TRUE TRUE AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins. similar to PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G07470.1); similar to peptide methionine sulfoxide reductase [Brassica oleracea] (GB:AAR13689.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 1.07513382302008 10.4976778727647 6.3320874486512e-07 3.28398956871507e-05 14.5208976858482 16.9655815520724 1.07513382302008 0.105329539831360 AT5G19900_at 6.99638681184375 6.81818657063878 8.09640607751664 8.00493075555951 7.7279447695311 8.02241494330145 6.80465457332223 7.03332061057273 6.90939578711462 7.18365371570777 8.06069547734848 7.72006491229335 8.04237720215881 8.0390107110719 7.70778421573364 8.1985869094273 7.88788181172392 7.96118215980198 7.17248302226062 0.160208018912172 0.154115773665691 0.160093567088456 0.154115773665691 0.155808688185490 0.161216087783236 0.160777615433165 0.157121999598021 0.176200734426304 0.16372395484526 0.157455272263336 0.157826012844275 0.157782920895185 0.160849411493561 0.155144521965500 0.158926229388420 0.172555123602556 0.156363416692364 0.159381100918953 5 5 - 6728576 6729079 6728847.364 6728162 6730047 - gene protein_coding_gene TRUE TRUE AT5G19900.1 PRLI-interacting factor, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PRLI-interacting factor A [Medicago truncatula] (GB:ABE81556.1) 0.956737039066697 10.4870578749852 6.39473004818288e-07 3.31251535396579e-05 14.5120319285183 14.9583850223554 0.956737039066697 0.0732419800383432 AT5G56150_at 9.75377252958656 9.72229031287037 10.8001281437673 10.7790165397629 10.6208558342590 10.5132894926845 9.90451079362655 10.1183675079034 9.49106839597994 9.88703440041622 10.7084928178455 10.5050248202784 10.6104456647862 10.5664450143553 10.3125927403961 10.4693207353528 10.7080886513284 10.5253113271008 9.43649639969733 0.0823631863621096 0.0818172027690009 0.0843547719878227 0.084443676273227 0.0844398135057721 0.0839542640685065 0.0827972629556157 0.0814693124017138 0.0942313412633498 0.0831172825470144 0.0818475696933781 0.0818689207767204 0.0828021485942322 0.0877622027305024 0.084954466877457 0.0814693124017138 0.0863120411374528 0.0842855164760048 0.0863519667724517 5 5|0 +|/ 22747018 22748151 22747694.375 22746402 22748413 + gene protein_coding_gene TRUE TRUE AT5G56150.1|AT5G56150.2 UBC30; ubiquitin-protein ligase similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum] (GB:AAD51109.1); similar to Os04g0667800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054191.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.874718019677155 10.4848406170284 6.40789341916377e-07 3.31537305397381e-05 14.5101796359313 20.3543197043717 0.874718019677155 0.0419428393754304 AT5G48570_at 4.36328192229756 4.39331881265761 5.65298783817393 6.46128855342053 5.53233691698652 4.74022844881301 4.13902230431342 3.95606676482259 4.1437211800675 3.82509646170749 5.6306802193001 5.36293154883989 5.29512705142546 5.6943019492806 5.78492578335484 5.4031137603398 5.22138443567423 6.1576939685108 3.73611508748279 0.230973391890854 0.227000454138826 0.23709538118463 0.238039000314691 0.227784534451970 0.245933358917917 0.230023782252432 0.228252760092079 0.243515975090928 0.227608185406608 0.225608780147179 0.23694126084532 0.225608780147179 0.231981934445066 0.230312079222704 0.225608780147179 0.254180434887854 0.236787236082498 0.237716392420108 5 5 - 19707974 19708950 19708472.364 19707768 19711071 - gene protein_coding_gene TRUE TRUE AT5G48570.1 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative similar to ROF1 (ROTAMASE FKBP 1), FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25230.1); similar to peptidylprolyl isomerase [Triticum aestivum] (GB:CAA68913.1); similar to 70 kDa peptidyl-prolyl isomerase (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (GB:Q43207); similar to Os08g0525600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062292.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.52545679241525 10.4806739339006 6.43270979765183e-07 3.31945356067912e-05 14.5066975936859 9.64002348652396 1.52545679241525 0.198459886414961 AT5G09770_at 6.56572910809235 6.8855515280341 7.40453653943321 7.22338049424927 7.76546280904734 7.97604779273259 6.15376258650254 6.31112475472307 6.02714697268101 5.81246838941106 6.77211864768588 6.54299560149597 6.82444270663824 6.66694329304534 7.27719504793715 6.66998579413438 7.14882220048938 6.43241143601799 6.0421243152012 0.205067200204014 0.205818280957714 0.205572425183535 0.215077487698602 0.215770968870542 0.203432720217114 0.202497988555099 0.222544231156908 0.212134312924015 0.219603934850511 0.199468243792893 0.199128906536534 0.199128906536534 0.206231626498874 0.217627022611122 0.201997165807209 0.220263383586849 0.214440122899615 0.207779387481208 5 5|0 -|/ 3035291 3036490 3035713.778 3035041 3036562 - gene protein_coding_gene TRUE TRUE AT5G09770.1 ribosomal protein L17 family protein similar to ribosomal protein L17 family protein [Arabidopsis thaliana] (TAIR:AT5G64650.1); similar to Ribosomal protein L17 [Medicago truncatula] (GB:ABE93922.1); contains InterPro domain Ribosomal protein L17; (InterPro:IPR000456) 0.972299681513523 10.4803092888893 6.43488655248306e-07 3.31945356067912e-05 14.5063927898368 13.4119215682826 0.972299681513523 0.0782032437181226 AT5G53460_at 9.86883212061923 10.0036464029294 10.4573441329936 10.5230752526820 11.1869328964419 10.8837471093363 9.79453061155911 9.71632863996957 9.55929101372955 9.7578627399558 10.7625979590230 10.4828613680011 10.7012128097323 10.7718650115311 10.2967252153817 10.4834681751369 10.5993958243442 10.9631360237437 9.82860827141067 0.102887047025850 0.099319062208229 0.101152476489328 0.103998428090676 0.0976753769510751 0.106156431234600 0.106138259671295 0.0989997614882528 0.111551697332345 0.105700185655926 0.0993853046616203 0.0976753769510751 0.100668737495858 0.101537633645024 0.100070938489597 0.0976753769510751 0.10460587635221 0.0983325348321418 0.105509736896396 5 5|0 +|/ 21726083 21726790 21726524.111 21717744 21727259 + gene protein_coding_gene TRUE TRUE AT5G53460.1 GLT1 (NADH-dependent glutamate synthase 1 gene) NADH-dependent glutamate synthase similar to GLU1 (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT5G04140.1); similar to GLU2 (Glutamate synthase) [Arabidopsis thaliana] (TAIR:AT2G41220.1); similar to Glutamate synthase [NADH], chloroplast precursor (NADH-GOGAT) (GB:Q03460); similar to NADH glutamate synthase precursor [Phaseolus vulgaris] (GB:AAL26864.2); similar to NADH-dependent glutamate synthase [Medicago sativa] (GB:AAB41904.1); contains InterPro domain Glutamate synthase, NADH/NADPH, small subunit 1; (InterPro:IPR006005); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Ferredoxin-dependent glutamate synthase; (InterPro:IPR002932); contains InterPro domain Glutamate synthase, central; (InterPro:IPR006982); contains InterPro domain Glutamate synthase, alpha subunit, C-terminal; (InterPro:IPR002489); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.91717209704527 10.4796627013455 6.43874833583647e-07 3.31945356067912e-05 14.5058522828677 20.4782605491799 0.91717209704527 0.0600807912606557 AT5G03530_at 3.07133658853403 3.3353018781819 4.87868666989128 4.24409337956992 6.56866710630516 5.49045925607148 4.27208046078268 4.32047844105092 4.17681901414154 4.11583833926996 6.54979646526762 5.68254190066452 5.50397911157782 6.68424589017409 5.36799756489925 6.22316478963155 5.42835181119913 6.28637752323936 4.3683793990803 0.243880665863409 0.235000036084453 0.246566914592258 0.243315330669739 0.251243896130392 0.235000036084453 0.235000036084453 0.239707865236249 0.246100741045037 0.241869586955514 0.239340410599053 0.240515386328510 0.251425905283268 0.249616087419923 0.235317389747943 0.237507610600323 0.252599167777178 0.25096250378819 0.245657851410699 5 5|0 -|/ 885741 886957 886419.333 885521 887389 - gene protein_coding_gene TRUE TRUE AT5G03530.1 ATRAB ALPHA (Arabidopsis Rab GTPase homolog C2a); GTP binding similar to AtRABC2b/AtRab18C (Arabidopsis Rab GTPase homolog C2b), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09910.1); similar to RAB1X [Lotus japonicus] (GB:CAA98163.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 1.64556927936991 10.4427821199678 6.66324250269025e-07 3.43111022601314e-05 14.4749596263566 9.61571420567122 1.64556927936991 0.221432950414163 AT5G04850_at 7.28061135639683 7.57281534917182 8.7975198947031 8.60762647838314 9.08093176179624 8.6413849605505 7.61749249267616 7.90730503951619 6.94503594735086 7.23688827686966 8.1095511560462 7.92374995805381 8.5298179887226 8.27285497916262 7.59117372407759 8.38303033158929 8.18033532332752 7.95465359341336 7.22145192398665 0.141231611241413 0.139023491585086 0.143564149410862 0.148013421810083 0.140568636710947 0.134784388829214 0.138413686378170 0.142232367113683 0.166370057078093 0.136929509785595 0.138387193391976 0.135215335662 0.135107746554047 0.139177509070734 0.139670623459471 0.137842591728074 0.150479526921746 0.140564019496055 0.138313444907056 5 5|0 -|/ 1408265 1409391 1408732.5 1408063 1409893 - gene protein_coding_gene TRUE TRUE AT5G04850.1 SNF7 family protein similar to SNF7 family protein [Arabidopsis thaliana] (TAIR:AT3G10640.1); similar to putative CGI-34 protein [Oryza sativa (japonica cultivar-group)] (GB:BAB16321.1); similar to Os05g0102900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054389.1); contains InterPro domain Snf7; (InterPro:IPR005024) 1.08549844007403 10.4412649533896 6.67265785439024e-07 3.43188261253573e-05 14.4736861394184 15.8145132155833 1.08549844007403 0.109262524740751 AT5G12260_at 5.12983761866524 5.22250895973755 6.08556541462523 6.29031835162596 6.70328041049707 6.59585528723406 6.04921174980092 5.49360444159689 5.01791868558191 5.05029673665120 6.46909335262327 6.62456157459701 6.43946443242722 6.40514161125515 6.30120545905391 6.31608462244622 6.39318628916827 6.18553611594222 5.52851645545477 0.196711640813709 0.196066527256584 0.197555775851445 0.196318496974310 0.195607888905147 0.197582479780091 0.196522702103785 0.196104641418887 0.206152281516025 0.199655882754007 0.195095050420885 0.197539104908652 0.197285263834079 0.218301714684688 0.199776728769629 0.196713630891827 0.203685343774025 0.200605577218432 0.207898238542787 5 5 + 3968088 3968659 3968385.909 3966366 3968879 + gene protein_coding_gene TRUE TRUE AT5G12260.1 similar to glycosyltransferase family protein 2 [Arabidopsis thaliana] (TAIR:AT5G60700.1); similar to Sugar transporter superfamily [Medicago truncatula] (GB:ABE86463.1); contains domain Nucleotide-diphospho-sugar transferases (SSF53448) 1.06891886491931 10.4353174232036 6.70970711438625e-07 3.4468490058815e-05 14.4686918500881 11.7416201832654 1.06891886491931 0.105371872211640 AT5G05610_at 7.74366732838053 7.99774465096699 8.44013627846277 8.5451497488387 8.53098823755306 8.8565166391597 7.15914533467716 7.5930225528639 7.31986023239798 7.07245712811361 8.52343277102255 8.43062726058438 8.19372366129875 8.33112668242448 8.30678015549369 8.6360011160279 8.48758690850092 8.25025147918279 7.29517389076801 0.166327678182161 0.164593878850795 0.165247005496325 0.164593878850795 0.171007800899907 0.164593878850795 0.171281148847536 0.188536211228182 0.197077873302040 0.178487627500226 0.168335278125292 0.170719143492887 0.169924412125749 0.175417534473608 0.170442175126015 0.166507311284995 0.175198308336653 0.168378166826395 0.175372018855722 5 5 - 1677344 1678553 1677912 1676933 1679105 - gene protein_coding_gene TRUE TRUE AT5G05610.1|AT5G05610.2 PHD finger family protein similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G11200.1); similar to PHD4 [Medicago truncatula] (GB:ABJ99761.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 1.06779013158591 10.4296455470738 6.74524746150877e-07 3.46100574830368e-05 14.4639260319071 15.9203488487346 1.06779013158591 0.105236772953526 AT5G11340_at 6.18685421855226 6.89440837181316 7.44102394047393 7.57848082437524 7.51156522891508 7.29822102722815 5.98692189247596 6.41464248115452 5.02426274785505 4.98767585264278 6.86764773457854 6.94135715144652 6.80869537340633 6.07288941687888 7.03526223460292 6.57001165889401 6.57650624563453 5.73051957794493 5.37382762331899 0.223665486254937 0.214519214212639 0.215109482496587 0.219057132808883 0.211210965788314 0.224883483355334 0.218378242779329 0.216133896530499 0.230614138322461 0.231075283569218 0.212080284922364 0.208714009105964 0.215246796300503 0.237113327786787 0.213318471893378 0.208759615579442 0.222451106545957 0.231352936330812 0.224482198060798 5 5|0 +|/ 3619295 3621023 3620262.5 3619156 3621302 + gene protein_coding_gene TRUE TRUE AT5G11340.1 GCN5-related N-acetyltransferase (GNAT) family protein similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.1); similar to Mak3 protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52531.1); similar to Os01g0610400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043544.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 1.26669422357509 10.4250674581348 6.77408320953639e-07 3.47169294066437e-05 14.4600771337496 12.7659897058463 1.26669422357509 0.149668567336682 AT5G42520_at 8.36296646448694 8.81398163477206 8.87968583360326 9.03303891898528 9.58691433354116 9.62806947937755 8.57971604120386 8.70108118477606 7.49690731716691 8.43217860058011 9.66863249991637 9.49882978980757 9.34626821292265 9.54046962064344 9.2818255895083 9.47427125088461 9.35045611127098 9.42357481498408 8.47040783648966 0.145055118751172 0.139968751685188 0.145352479368532 0.145493264195756 0.142714640848934 0.147959322467665 0.148794701861774 0.145140200987954 0.157127687917071 0.151126984678543 0.143336360331122 0.139968751685188 0.139968751685188 0.142523364487514 0.148122733996957 0.140905982665988 0.152922722437605 0.150042983878409 0.165446829194897 5 5 + 17019101 17019620 17019402.545 17017487 17019835 + gene protein_coding_gene TRUE TRUE AT5G42520.1|AT5G42520.2|AT5G42520.3 ATBPC6/BBR/BPC6/BPC6 (BASIC PENTACYSTEINE 6); DNA binding / transcription factor|ATBPC6/BBR/BPC6/BPC6 (BASIC PENTACYSTEINE 6) similar to ATBPC4/BBR/BPC4/BPC4 (BASIC PENTACYSTEINE 4) [Arabidopsis thaliana] (TAIR:AT2G21240.2); similar to GAGA-binding transcriptional activator [Cardamine pratensis] (GB:ABG57061.1); contains InterPro domain GAGA binding-like; (InterPro:IPR010409) 0.991183605781887 10.4190002574166 6.81250484084786e-07 3.48726182769469e-05 14.4549733605063 17.7387845218372 0.991183605781887 0.0853696559509142 AT5G47800_at 1.78275843848642 1.62387513762403 2.04808386128691 1.93478002877009 2.48253395223007 2.68754983919098 1.41704740243293 1.52959684214010 1.05172086094149 2.03790568252202 2.53663882694858 3.27160255552884 3.00135418436437 3.2267295878038 3.28897209748711 2.83006147990708 2.75517510100622 2.94591601230292 2.60437274869368 0.222296980608525 0.214022285116664 0.226322727465536 0.228340421975208 0.218904487393254 0.221989871947288 0.218754868724171 0.216044479784067 0.226529938121218 0.224745594889252 0.214398443627491 0.221855092541415 0.232473830727376 0.219296454412626 0.222021289642320 0.221729594487513 0.217905531262882 0.218992920594573 0.219027646090484 5 5|0 +|/ 19372638 19373198 19372883.5 19370902 19373526 + gene protein_coding_gene TRUE TRUE AT5G47800.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G67900.2); similar to putative non-phototropic hypocotyl 3 [Oryza sativa (japonica cultivar-group)] (GB:BAD26466.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.89198696590743 10.4075900358815 6.88540484106677e-07 3.52042235935995e-05 14.4453658922524 4.3783061851307 0.89198696590743 0.0527122778942635 AT5G53620_at 7.06293592871159 7.25743996958512 7.56272501042661 7.62556432530051 8.01218461576163 7.74920724854258 7.11097780510521 7.10067335630154 6.46653330800168 6.53114919115504 7.72270342493343 7.93356358917194 7.46593847094673 7.59842389761512 7.71827470968497 7.65987876058263 7.64737649429259 7.55792807127906 6.37853381115519 0.204187063840790 0.199777492576187 0.217520912801703 0.216693292231673 0.199777492576187 0.234559993572358 0.212035547352551 0.203443364826427 0.220174849307560 0.205776222585505 0.205479226469849 0.200217335708747 0.205579441062322 0.219228764306283 0.202700502788123 0.200810004773765 0.218949776498417 0.206365034233956 0.208466067890557 5 5|0 +|/ 21801435 21802183 21801763.2 21798173 21802456 + gene protein_coding_gene TRUE TRUE AT5G53620.1|AT5G53620.2|AT5G53620.3 similar to intracellular protein transport protein USO1-related [Arabidopsis thaliana] (TAIR:AT2G46180.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71275.1) 0.904342846145653 10.4063077387384 6.89365026378104e-07 3.52048662479547e-05 14.4442854472326 14.4960883811755 0.904342846145653 0.0576674329841877 AT5G49480_at 8.61098366393294 8.84612708762498 10.603197470067 10.6788000371236 9.37050692513589 9.2420306276211 10.6227780620640 10.7340807215444 8.25136588756025 8.91557993639409 9.75385680258166 10.0660117787124 10.1692164877214 9.77842329495282 9.14240682139342 10.7996995175533 10.6037553950628 9.53400943540704 8.24995678640708 0.124529568642760 0.128735228596793 0.130827554025092 0.130241650715790 0.124529568642760 0.133465460820759 0.126327612352929 0.126865987568681 0.144819980620787 0.137863741403099 0.13405356666016 0.125420691202956 0.12613444118279 0.129178352152264 0.135622091341197 0.124529568642760 0.129765184431461 0.132992543789669 0.148818017900602 5 5 + 20088042 20088491 20088280.909 20087969 20088864 + gene protein_coding_gene TRUE TRUE AT5G49480.1 ATCP1 (CA2+-BINDING PROTEIN 1); calcium ion binding AtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl. similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to hypersensitive reaction associated Ca2+-binding protein [Phaseolus vulgaris] (GB:AAD47213.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.889381476373975 10.4002818231180 6.93254197211579e-07 3.53618293753149e-05 14.4392060834250 19.0651747302860 0.889381476373975 0.051888304446988 AT5G14040_at 9.80657780624722 9.70452850269616 10.4929348807227 10.4928778567016 10.0777021120050 10.1242095161229 10.0617822989666 10.2786104168157 9.19702912408977 9.1187687700304 10.4490896682177 10.7401632686518 10.4757364734092 10.3878197298493 10.8109359761997 10.4373820600234 10.2429022377883 10.2048803096498 8.88502239561009 0.0958750746879716 0.0955541999886709 0.0991754497394364 0.096121803806129 0.0966959698683987 0.100625925138359 0.096929871761976 0.0973208692388735 0.118281850558358 0.106698490384087 0.0953949558756314 0.0949805049211154 0.095816614769541 0.100137153803117 0.0950058214184215 0.095392762283627 0.101969575423310 0.095780259770405 0.110621634387220 5 5|0 -|/ 4531071 4532040 4531529.3 4530645 4533072 - gene protein_coding_gene TRUE TRUE AT5G14040.1 mitochondrial phosphate transporter similar to mitochondrial phosphate transporter, putative [Arabidopsis thaliana] (TAIR:AT3G48850.1); similar to mitochondrial phosphate transporter [Glycine max] (GB:BAA31582.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.867864977051767 10.3955172930689 6.96346131977096e-07 3.54778056130116e-05 14.4351876135315 19.8976798298100 0.867864977051767 0.0422449917442692 AT5G47200_at 9.43535979652244 9.52376278672522 10.4714555117809 10.4428539103702 10.1662523220291 10.1463403143184 9.33681747587088 9.46008231398883 9.05401598458827 9.0512067202598 10.0283270170381 10.0568693482701 9.95821119243532 9.97195410625774 9.91576496360147 9.84266390724538 9.7461571601812 9.94232052340286 9.24157328389893 0.103592179442197 0.103249851169861 0.105173629496605 0.105892842558677 0.107012081326243 0.106523723425735 0.105826074516693 0.103735372675106 0.113479562757465 0.107913883928872 0.102801678839789 0.102801678839789 0.102801678839789 0.111679643066407 0.108966719397210 0.104722958326204 0.103519655867418 0.109218434168530 0.110055842051591 5 5|0 +|/ 19184706 19185921 19185476.5 19184129 19186183 + gene protein_coding_gene TRUE TRUE AT5G47200.1 AtRABD2b/AtRab1A (Arabidopsis Rab GTPase homolog D2b); GTP binding similar to RAB1C, GTP binding [Arabidopsis thaliana] (TAIR:AT4G17530.1); similar to GTP-binding protein, putative [Brassica oleracea] (GB:ABD64935.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.842452392868094 10.3941118724490 6.9726103596061e-07 3.54827232909235e-05 14.4340018654463 19.3970566490606 0.842452392868094 0.0269342495837024 AT5G50350_at 4.6902000777203 4.60985162556164 5.80730994803623 5.96441171205766 5.19431938692832 5.68104169722664 3.59384525868939 3.85199222188160 4.21279879957467 4.00365288178226 4.60720458007203 4.94447827796511 5.01554152949459 4.99062061080374 4.58890036975549 4.94921185421868 5.08539174426898 4.49450203056536 4.46026311556663 0.200284991067328 0.196480002389428 0.209113925277147 0.199153522267916 0.201392154342382 0.199241339217344 0.196480002389428 0.199331591146859 0.212771967921447 0.200558521195203 0.198524806286280 0.201027922817642 0.196480002389428 0.200076778506629 0.205261354426698 0.196480002389428 0.196480002389428 0.198364255533611 0.20785251896795 5 5 - 20515925 20516406 20516168.273 20515702 20518906 - gene protein_coding_gene TRUE TRUE AT5G50350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to Os11g0129800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065647.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001078830.1); similar to Os06g0609800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058048.1) 1.04210408288373 10.3775240982326 7.08158588083808e-07 3.59735832282129e-05 14.4199931413607 9.45414797782148 1.04210408288373 0.100114074904111 AT5G27350_at 9.48409994928652 9.83393840081255 10.8576285435639 10.9933029585878 11.4747608855550 11.1729867698259 10.7674983379583 10.7257938973675 9.8902726432097 10.3131624044310 11.1505004983640 10.6387181334593 11.4621557022875 11.2703691420317 10.4965040177651 11.1745763597488 11.5634646810609 11.1337457897709 10.0090097313371 0.0932217735694534 0.0886093468306621 0.0858545483244417 0.0916191044659534 0.0848780153393899 0.0853792611045718 0.0853000657171289 0.0873342949755201 0.103126083953984 0.0874845215532963 0.092517847266707 0.0859240381531677 0.0832273996307355 0.0918548615058695 0.09627598960143 0.0846510366714868 0.0879009097760834 0.0850615307191887 0.0842837150439705 5 5|0 +|/ 9652092 9654135 9653305.778 9648670 9654429 + gene protein_coding_gene TRUE TRUE AT5G27350.1 SFP1; carbohydrate transporter/ sugar porter Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides. Identical to Sugar transporter ERD6-like 17 (Sugar-porter family protein 1) (SFP1) [Arabidopsis Thaliana] (GB:Q94CI7;GB:Q94EJ0); similar to SFP2 (SFP2), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G27360.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G05160.1); similar to carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G05165.3); similar to Os03g0363600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050166.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.98113825363101 10.3769090503791 7.08566192414644e-07 3.59735832282129e-05 14.4194732351149 21.2547858263132 0.98113825363101 0.0836413429626052 AT5G49830_at 7.04465929236807 7.23343745499644 7.74937973053839 7.76522939933889 7.6202407304691 7.65345080168328 6.62310176419247 6.91493290525003 6.771791257657 6.22281994307668 7.55617093097594 7.73966332192942 7.55014585395689 7.49977002575234 7.56424171944374 7.43802229883721 7.13025988746678 7.55773340779298 6.30462087576932 0.161906797890331 0.165294198667745 0.168971454736286 0.169823825443541 0.165935807998227 0.165521657563499 0.163075766638495 0.161837533812381 0.165848371283626 0.169790958165867 0.160476898275669 0.163443804588883 0.163135494907912 0.166517281441446 0.177547713510321 0.161086366141282 0.173564960397006 0.170360645305293 0.167412376537047 5 5|0 -|/ 20268043 20268999 20268463 20267712 20272265 - gene protein_coding_gene TRUE TRUE AT5G49830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10385.1); similar to expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07222.1); similar to AT5g49830/K21G20_4 [Medicago truncatula] (GB:ABE86338.1); similar to Os07g0200000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059127.1); contains domain FAMILY NOT NAMED (PTHR21426); contains domain gb def: Gb|AAD32890.1 (AT5g49830/K21G20_4) (PTHR21426:SF3) 0.907232941620371 10.3536775700103 7.24150300434589e-07 3.6677943161431e-05 14.3998099661496 14.2943431546565 0.907232941620371 0.0604842093650425 AT5G24710_at 4.33779006670904 4.53339519474087 5.37273927035222 5.08091101102855 5.60134441846098 5.67952524601172 4.98348744863435 4.66595426151897 4.04145615750385 3.48932787435905 4.87330947711106 5.15172299777309 5.00321419842486 4.60310398413733 4.81040756902129 5.06465972030376 4.85671520356704 4.69766906979141 3.6665264960202 0.201665464819899 0.199919809376909 0.208311828360916 0.203848052830727 0.204469181753452 0.215634552385293 0.200343945341350 0.197083251767325 0.205294360134839 0.203427018590819 0.201065675604682 0.202451072197248 0.198076686086195 0.204101883235189 0.208256475238546 0.198694846880167 0.197201170874793 0.202956243683870 0.19756810902513 5 5|0 -|/ 8459261 8467351 8462423.444 8458850 8468176 - gene protein_coding_gene TRUE TRUE AT5G24710.1 similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38560.1); similar to Os01g0653800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043744.1); similar to WD-40 repeat family protein [Medicago sativa] (GB:AAZ31064.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; WD40-like [Medicago truncatula] (GB:ABD32844.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.976818339225544 10.3524593589677 7.249777077424e-07 3.6677943161431e-05 14.3987774943701 9.33941192475405 0.976818339225544 0.0830598688499845 AT5G61250_at 6.04773290248609 6.02264714665685 7.0772560232364 7.26329509298085 7.77003877302173 6.2605618569993 2.00632654769115 2.34780057732945 3.60139264335389 2.46466740033452 3.38150746966429 3.94280123698279 3.88618017487243 4.21542929241576 2.91603956494766 4.18024527264048 3.52488433608908 3.95618736442318 2.73445181518724 0.246953558400425 0.225259086453599 0.230130227972321 0.237382773215085 0.246240445293121 0.239010233994812 0.243023292666455 0.246475166955207 0.229121130844443 0.226906420324066 0.225941551163542 0.224063710255262 0.243254768579723 0.226949624631393 0.233026488036853 0.228111643999429 0.256329518754697 0.229756570940275 0.228742170878462 5 5|0 -|/ 24649535 24650224 24649800 24649380 24652529 - gene protein_coding_gene TRUE TRUE AT5G61250.1|AT5G61250.2 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 2 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q8L608;GB:Q9FLK8); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07830.1); similar to Os03g0211700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049350.1); similar to putative heparanase [Hordeum vulgare subsp. vulgare] (GB:CAD42650.1); similar to Os12g0578400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067122.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 1.90178326453230 10.3427324006540 7.3162119329225e-07 3.69709092825052e-05 14.3905286886247 8.94141401103173 1.90178326453230 0.269785777239598 AT5G24620_at 9.1835734106976 8.71349278400015 9.99661943799665 9.7409461583383 10.1294877831242 9.7651047848529 8.90532651004365 8.658533260454 8.19988232405213 8.60469195513236 9.65209035382933 9.62525167745244 9.86351011977342 9.85297184395518 9.43730867934344 10.0447426556302 9.90137797008742 9.83747918098402 8.93446230314224 0.0919512628517273 0.0953188836958022 0.0906726643694051 0.0938593742597932 0.0929884868650195 0.0914757096515584 0.0906726643694051 0.102747074418706 0.110327949926811 0.100865177314365 0.0945807127381979 0.0906726643694051 0.0906726643694051 0.0935673328861844 0.105861126907105 0.0906726643694051 0.0934879143057931 0.0939976740003711 0.0944677788719119 5 5 + 8431099 8431652 8431349.273 8430771 8432417 + gene protein_coding_gene TRUE TRUE AT5G24620.1 thaumatin-like protein, putative similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT4G36010.2); similar to putative pathogenesis-related protein [Oryza sativa (japonica cultivar-group)] (GB:BAC57321.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 1.11998537456776 10.3411763899219 7.32690065273002e-07 3.69818200832604e-05 14.3892083268772 18.5648957266422 1.11998537456776 0.119899097535532 AT5G50280_at 5.39704203732376 5.29275119284994 5.82913586719682 5.7829235536174 6.40304099954064 6.2794795456365 5.446514358276 5.19681023366457 5.52510144786486 5.89618948578466 6.91470161927236 6.99597888498461 6.55845760391546 6.77389534030567 6.95429731540334 6.95884588182694 6.46872081596748 6.79181563405376 5.89892100960348 0.188562766362661 0.185643809067035 0.190722648339596 0.189438607729153 0.183888829812919 0.183223484060830 0.182761386041967 0.187560907663054 0.199147413961997 0.182761386041967 0.186938681697767 0.188975404038161 0.182761386041967 0.188162781935654 0.188316782680178 0.184913920863808 0.191766341585962 0.192774855972653 0.182761386041967 5 5 + 20478142 20478690 20478382 20476464 20478730 + gene protein_coding_gene TRUE TRUE AT5G50280.1 EMB1006 (EMBRYO DEFECTIVE 1006); binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G02860.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os05g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055108.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.884525345925572 10.3376620548125 7.35110417140709e-07 3.70240847301894e-05 14.3862253957706 11.9912087825385 0.884525345925572 0.052098290029678 AT5G18590_at 8.54051671501559 8.3848248182447 9.01950895237317 9.06604176383196 9.95644384433746 9.5379101895766 8.36354400325342 8.04826675155334 7.41732540281465 8.2177941836406 9.04669284897325 8.8558374773796 9.0064446769872 8.93833954515737 8.74245949675343 8.80007670733028 8.92408115559201 8.84029778008845 8.12024817214225 0.140155163944850 0.135712524322501 0.145100984373727 0.142490564377899 0.147144013599574 0.147788915179075 0.135306156514433 0.139129741844407 0.162236564648347 0.154745921700276 0.138049825136836 0.141982261586696 0.139744382359269 0.138745100246359 0.138562721919522 0.136913408521075 0.139139802798493 0.144477312529777 0.143838382985349 5 5|0 -|/ 6178520 6179190 6178907.2 6178356 6182737 - gene protein_coding_gene TRUE TRUE AT5G18590.1|AT5G18590.2 kelch repeat-containing protein similar to ACBP4 (ACYL-COA BINDING PROTEIN 4, ACYL-COA-BINDING DOMAIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.2); similar to Os12g0538800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066944.1); similar to Kelch motif family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95166.1); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 1.01825545350661 10.3374810911208 7.35235283203855e-07 3.70240847301894e-05 14.3860717648117 17.2709994450559 1.01825545350661 0.0949399138517802 AT5G15020_at 4.68654257357346 4.59735836046631 5.85384786874009 5.6345667504059 6.7050461832044 5.79161536442994 4.44583697326088 4.71894517299517 3.95834819603666 4.25188276744171 6.03201347416625 5.64628383116094 6.22911204216277 5.49071975136079 5.45089454907095 6.35072806008998 5.14824919307834 5.68466982189955 5.07126794997941 0.262883674714259 0.255300249657935 0.253473693880902 0.253898315998727 0.255222746812978 0.253814948567657 0.250880524283657 0.251613144523672 0.267752834008540 0.27227327786736 0.257568555909185 0.254696622674117 0.258211598119771 0.266375556429959 0.249985414238652 0.259501414500919 0.261073028840159 0.262783989684444 0.253386220618405 5 5|0 -|/ 4859414 4860162 4859798.333 4859141 4866034 - gene protein_coding_gene TRUE TRUE AT5G15020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01320.1); similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) [Arabidopsis thaliana] (TAIR:AT1G24190.1); similar to transcriptional repressor protein-related [Musa balbisiana] (GB:ABF70137.1); similar to paired amphipathic helix repeat-containing protein / transcription regulator-related [Musa acuminata] (GB:ABF70056.1); similar to Paired amphipathic helix [Medicago truncatula] (GB:ABE86951.1); contains InterPro domain Histone deacetylase interacting; (InterPro:IPR013194); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) 1.35550790375445 10.3296201823501 7.40681655334053e-07 3.72119077079763e-05 14.3793952480082 10.3948449783143 1.35550790375445 0.169997647004296 AT5G22290_at 7.77059260411184 7.78202145153966 9.21801813622012 9.40767379298417 9.5197827506087 9.0579379754977 8.02905807119038 7.46764922707783 6.38546733809886 6.42100040548022 6.75863923860611 6.82500599239286 7.84326683728825 7.64927316278328 6.22557624401297 7.97489379224231 8.8080163251579 6.9774310214916 6.98054336901415 0.23259405011749 0.223595762348222 0.228908765413444 0.225028002825669 0.235638547038467 0.241520784323195 0.22237220316771 0.226195461789877 0.242520904179956 0.226561641386522 0.221888677844111 0.227265610359712 0.227907015311554 0.225794555317608 0.228054435386175 0.228252446017229 0.231969981897979 0.234163825103993 0.226951755599805 5 0|5 /|- 7376068 7376672 7376348.4 7375926 7377647 - gene protein_coding_gene TRUE TRUE AT5G22290.1 ANAC089 (Arabidopsis NAC domain containing protein 89); transcription factor similar to ANAC060 (Arabidopsis NAC domain containing protein 60), transcription factor [Arabidopsis thaliana] (TAIR:AT3G44290.1); similar to no apical meristem, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP55107.2); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.16280764061512 10.3235652404914 7.44906649314334e-07 3.73633326820107e-05 14.3742487029669 15.5208083499595 1.16280764061512 0.130030788544348 AT5G42890_at 9.64858970624504 9.6445525612641 10.4672585043552 10.4505077624764 10.6223604803442 10.3413284060839 9.4485315826753 9.26556271395025 8.94047573740909 9.43876024043449 10.0622150834922 9.93993425704883 9.9193458382303 10.1220829700802 10.0526446746074 9.79361059985411 9.95280853905024 10.3172168215843 9.19695007867721 0.0763253442814537 0.076584842253312 0.0759871784771565 0.0776704270193606 0.0763330551365633 0.080473031302515 0.0796212131063577 0.0803619425297672 0.0919650941736855 0.0816232400477809 0.0786051411171577 0.0754494710560887 0.0754494710560887 0.0761193965685113 0.0774727430842396 0.0754494710560887 0.0769219773997825 0.0779428975568074 0.0836419107342542 5 5|0 -|/ 17211691 17213103 17212537.4 17211425 17213260 - gene protein_coding_gene TRUE TRUE AT5G42890.1 sterol carrier protein 2 (SCP-2) family protein similar to Sterol-binding [Medicago truncatula] (GB:ABE88913.1); contains InterPro domain Sterol-binding; (InterPro:IPR003033) 0.898237488217218 10.3228332364425 7.45419195081672e-07 3.73633326820107e-05 14.3736262886621 19.5921086480911 0.898237488217218 0.058109663638803 AT5G64880_at 6.96959885248382 7.53751243443067 7.73756328709143 8.01993076780412 8.64843416618623 8.08631665642374 6.44136938653808 6.68705083801108 6.70084678594367 5.99391124275164 7.97715141955048 7.82921910775317 7.91499021603771 8.00993733722218 7.41065422281594 7.50976775837468 7.08771762963944 7.89596255312767 6.45054976048531 0.190352851276879 0.178927188135085 0.176837947915992 0.172562741732032 0.180774964289579 0.186903069632097 0.177543850263964 0.187668839608602 0.204814142665424 0.180813054169562 0.177503376045566 0.173721546245479 0.181332101947304 0.182672687203748 0.18005867736412 0.177467439774409 0.177730727475559 0.180015696301626 0.177655666784189 5 5|0 +|/ 25949676 25951014 25950258.5 25949516 25951379 + gene protein_coding_gene TRUE TRUE AT5G64880.1 unknown protein 1.26841705450771 10.3188581748984 7.48209209953593e-07 3.74598729549167e-05 14.3702454758922 14.5590691954338 1.26841705450771 0.152699801342088 AT5G23610_at 8.6617624133338 8.58071717406122 9.57340684707742 9.45865931120335 9.7251767739488 9.56796411106556 8.33671169749776 8.1318003040761 8.3791527046755 8.42532292073474 9.32147591530888 9.19816889354085 8.987668633435 8.73539782001718 8.65642764921068 9.36702859863355 9.12004506720782 8.9548090059534 8.50632390796718 0.149956241894452 0.147357952445583 0.147465195959653 0.148168854298447 0.144854623260190 0.147619046455107 0.151037181010892 0.150692212306796 0.154762277794303 0.166947545316832 0.151699118182580 0.143270237570996 0.144891333027772 0.153808798863584 0.154109357858058 0.145396837752907 0.150809847756336 0.146754637956463 0.157000736122278 5 5 - 7957649 7958484 7958151.455 7957343 7960275 - gene protein_coding_gene TRUE TRUE AT5G23610.1|AT5G23610.2 similar to SWI1 (SWITCH1), phospholipase C [Arabidopsis thaliana] (TAIR:AT5G51330.1); similar to meiosis protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97916.1); similar to Expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95531.1); similar to Os03g0650400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050785.1) 0.879624191851253 10.3138652129845 7.5172974878498e-07 3.75575873820598e-05 14.3659968611332 17.7443052668859 0.879624191851253 0.0508791978640687 AT5G01710_at 8.28281321285472 8.29149992697275 9.13531058714947 9.09817867243 9.1588382116909 9.16950917521343 7.81496256670485 8.01787694200855 8.71059316890684 8.4089878361195 9.42182095266844 9.25812994998704 9.04958292108139 9.35362934796523 9.05257169821501 9.43754035146213 8.97816456693329 9.28813462181567 8.5912873755183 0.0957836980099091 0.0934762576420714 0.094203010128845 0.0971386338045115 0.0954614458418187 0.0977839522643351 0.104151149421932 0.0958453291092955 0.100189496692255 0.0970786098818723 0.090044615628872 0.0926269564282538 0.0928604265162796 0.0914603507093634 0.0936092771310149 0.0905887157059799 0.0959263016664259 0.0921249262502606 0.0968260727946714 5 5 - 263713 264197 263952.909 263516 265613 - gene protein_coding_gene TRUE TRUE AT5G01710.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24805.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC75560.1); contains InterPro domain Methyltransferase FkbM; (InterPro:IPR006342) 0.849164170285109 10.3136337432700 7.51893393897193e-07 3.75575873820598e-05 14.3657998427790 17.5212417926019 0.849164170285109 0.0357777077756613 AT5G55000_at 6.05311119403545 6.1381518177341 7.07697013999265 6.83834887429272 7.74885761032774 6.90343968165301 5.46946428658218 5.477276192523 4.82721278368759 4.8932648100493 6.14459737302836 6.15358455938584 6.2338073957257 6.18193131444188 5.82890535195417 6.42873638843039 6.02096976848123 6.02426220032313 5.13516823933154 0.198786148497119 0.194194827874391 0.210299105662413 0.208551865687838 0.198908398719133 0.199113768286060 0.204909997913672 0.202406799883699 0.221901549379401 0.193273583257435 0.202162891734430 0.196174008306674 0.193273583257435 0.193273583257435 0.204877337531082 0.194421201374682 0.20932949622911 0.203010268221996 0.202524127436586 5 5|0 +|/ 22337622 22338797 22338110.444 22335536 22338973 + gene protein_coding_gene TRUE TRUE AT5G55000.1|AT5G55000.2 FIP2 (FH protein interacting protein 2); voltage-gated potassium channel FH protein interacting protein FIP2 similar to thylakoid lumenal 15 kDa protein, chloroplast [Arabidopsis thaliana] (TAIR:AT2G44920.2); similar to potassium channel tetramerisation domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53945.2); similar to Os03g0157500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049015.1); contains InterPro domain K+ channel tetramerisation; (InterPro:IPR003131); contains InterPro domain Pentapeptide repeat; (InterPro:IPR001646); contains InterPro domain BTB; (InterPro:IPR000210) 1.26631027673152 10.3002843646003 7.6139694969072e-07 3.79640492738726e-05 14.3544289525077 12.0026930938063 1.26631027673152 0.152736257696474 AT5G14240_at 7.34840537666603 7.79662649321782 8.17357556676042 8.37478634273752 8.95608993756754 8.63273021075197 7.18452618392405 7.22586818927852 7.50949425894693 6.89416728235298 8.4901657354836 8.28827277811865 7.99154275000016 8.36020980801363 8.16773098223856 7.95873133830607 8.15563352434275 8.23066773787623 7.39793458613132 0.158570094237724 0.167626123310055 0.163268310287418 0.163793033120651 0.165920535010623 0.168601742146735 0.165057552899262 0.171649949551337 0.180850901094930 0.167386270960008 0.159411500972987 0.160813652221307 0.166911824018750 0.161679422516702 0.158330150115399 0.162790942091600 0.177344739544274 0.167123288844890 0.163531178569955 5 5|0 -|/ 4596318 4597334 4596770.8 4595931 4597663 - gene protein_coding_gene TRUE TRUE AT5G14240.1 similar to Os01g0184800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042236.1); similar to phosducin-like 3 [Homo sapiens] (GB:NP_076970.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Phosducin; (InterPro:IPR001200); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.04180478816824 10.2997474817173 7.61781880813908e-07 3.79640492738726e-05 14.3539712945104 15.6978600580836 1.04180478816824 0.102037499876090 AT5G47820_at 7.71989323268973 7.72957513627038 8.67034454757035 8.6323197261729 9.10736490245307 8.90889459895272 8.13838111376768 7.65401168470662 8.27063698531126 8.2547156106559 9.45746115852758 9.26943582827096 9.29468643052462 9.24832761026186 9.28825356715238 9.33438873569548 9.23044359682209 9.32651293792757 8.45627841573035 0.123913233911340 0.126160223940789 0.126988072029190 0.125183630572853 0.118570475370461 0.124737664827060 0.135514354027201 0.126547674085538 0.138201877744782 0.124996060171550 0.125864078833626 0.118570475370461 0.121129072991326 0.124201787566367 0.121445533107827 0.118782637325460 0.126540770315284 0.126196807449218 0.118570475370461 5 5|0 +|/ 19388808 19389396 19389122.5 19383709 19390015 + gene protein_coding_gene TRUE TRUE AT5G47820.1|AT5G47820.2 FRA1 (FRAGILE FIBER 1); microtubule motor encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. similar to chromosome-associated kinesin, putative [Arabidopsis thaliana] (TAIR:AT5G60930.1); similar to KICP-02, microtubule motor [Arabidopsis thaliana] (TAIR:AT3G50240.1); similar to kinesin-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72688.1); similar to KIF4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD34075.1); similar to putative KIF4 [Oryza sativa (japonica cultivar-group)] (GB:BAD16508.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.999122023921985 10.2971722504901 7.63631195362967e-07 3.80125188900911e-05 14.3517757043519 17.1367976530131 0.999122023921985 0.0908403198099194 AT5G04560_at 5.72486672606589 6.12528689384989 6.61084634171132 6.35220649221258 6.50963276432034 6.27456254563421 4.57852195257621 4.94495973204409 5.16085866058945 4.8080953619967 6.160446689013 6.19331024381428 6.03136394688237 6.01024514065347 5.89762319461827 5.97947986853586 5.67724497204192 5.73749596327619 4.71317717560431 0.182482697420414 0.180241543017602 0.181358902051186 0.186142457558925 0.182812908831291 0.180417680737436 0.182672945506544 0.183238852039857 0.181544206474206 0.184974491218738 0.183044939500809 0.184861938800374 0.179063816941182 0.179950854639063 0.178388898632800 0.179314429625434 0.18565855983347 0.179571377376866 0.182417791419639 5 5|0 +|/ 1312452 1318043 1314916.923 1309194 1318402 + gene protein_coding_gene TRUE TRUE AT5G04560.1|AT5G04560.2 DME (DEMETER) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. Identical to Transcriptional activator DEMETER (EC 3.2.2.-) (DNA glycosylase- related protein DME) (DME) [Arabidopsis Thaliana] (GB:Q8LK56;GB:Q1WEY5;GB:Q84TL4;GB:Q9LZ67;GB:Q9LZ68;GB:Q9LZ69); similar to ROS1 (repressor of silencing1) [Arabidopsis thaliana] (TAIR:AT2G36490.1); similar to Os01g0217900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042408.1); similar to putative endonuclease III protein [Ipomoea trifida] (GB:AAS79601.1); similar to Os02g0494700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046886.1); contains InterPro domain Iron-sulfur cluster loop; (InterPro:IPR003651); contains InterPro domain A/G-specific adenine glycosylase MutY; (InterPro:IPR013003); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265) 1.08013036472993 10.2923571277227 7.67102105924866e-07 3.81415056044639e-05 14.3476687764848 11.3175829235941 1.08013036472993 0.111719557621684 AT5G65990_at 7.21091640020701 7.48075108046674 8.41596661689906 8.5673255103717 8.3390015409571 8.45075658873216 8.20020169451523 8.82657450009539 6.94702628646272 7.46239740430649 8.72393954260794 8.64025753267368 9.06530041073245 8.93770295741282 8.87156926617708 8.58215534589026 8.914214416063 9.14152791154813 6.96074925546483 0.195201055431385 0.182264240269155 0.180545300056221 0.183242953121057 0.166980545711543 0.186324478051033 0.172644765105649 0.168362943305965 0.200554832509983 0.175537482668200 0.173589799120293 0.171527155635669 0.175819178823950 0.171163480623715 0.184968056825991 0.172093610844830 0.196385374119253 0.179987175271811 0.173490403435180 5 0|5 /|+ 26413038 26413523 26413274 26412108 26413739 + gene protein_coding_gene TRUE TRUE AT5G65990.1 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT4G38250.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G42005.1); similar to amino acid transport protein (GB:AAB82307.1); similar to OSIGBa0158F05.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66759.1); similar to OSJNBa0017B10.14 [Oryza sativa (japonica cultivar-group)] (GB:CAE03099.2); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.12492204311453 10.2853724427732 7.72167401207798e-07 3.83493812881439e-05 14.3417075524561 16.1779239440136 1.12492204311453 0.122435697867710 AT5G08290_at 11.2953428376397 11.3743250268310 12.1812140246935 12.1880253233774 12.1987680336532 12.0115086649156 11.4830274044687 11.4683249912894 11.0997295737330 11.2110831750878 12.1582762945902 12.0509614546948 12.1401037599971 11.9805783612311 12.1121556202432 12.1299740977927 12.1771914412772 12.1458877551763 11.1692741323284 0.06434935011717 0.0620979737526123 0.0642784842862598 0.0634163489544548 0.0646410914440742 0.0664206305239093 0.0622597783086089 0.0625325192945824 0.0680847705900823 0.0657291755659918 0.0623657297763981 0.0625515374097503 0.0635855759510176 0.064691496643419 0.0635061784002321 0.0620979737526123 0.0646357073177195 0.0657650040512743 0.0646982892014183 5 5 + 2666080 2666898 2666594.545 2665977 2667156 + gene protein_coding_gene TRUE TRUE AT5G08290.1 YLS8 (yellow-leaf-specific gene 8); catalytic Encodes Dim1 homolog. similar to catalytic [Arabidopsis thaliana] (TAIR:AT3G24730.1); similar to Os10g0486600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064903.1); similar to Thioredoxin domain 2 [Medicago truncatula] (GB:ABE80406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain mRNA splicing factor, thioredoxin-like U5 snRNP; (InterPro:IPR004123) 0.845743042172493 10.2821803616734 7.74494382348256e-07 3.84209396240435e-05 14.3389816952493 23.4110270676127 0.845743042172493 0.0352822820384808 AT5G06710_at 4.5786875492624 4.9320842007609 4.23104956209291 4.48261757336183 5.42661349023474 5.4759866978178 4.79453905526934 5.05450042646473 3.58736775091691 5.03554558861824 6.18179446755419 6.69435877813973 6.78132850103882 5.83575260027687 6.21272542839172 6.78055035736961 6.21572992833218 6.46959652035534 4.83729620392663 0.226974088787727 0.237724680694251 0.225998245708281 0.230920304410791 0.232975210524955 0.228418857523198 0.226383513589954 0.228413971048138 0.229906396377501 0.234444726407451 0.231360684288204 0.224995836638792 0.22303158223931 0.238850752304810 0.231231273624475 0.227006972355336 0.244408975707298 0.234366341154313 0.231059825857119 5 5|0 -|/ 2068325 2069360 2068701.6 2068066 2070362 - gene protein_coding_gene TRUE TRUE AT5G06710.1|AT5G06710.2 HAT14 (homeobox-leucine zipper protein 14); DNA binding / transcription factor|HAT14 (homeobox-leucine zipper protein 14); DNA binding Homeobox-leucine zipper protein. Identical to Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14) (HAT14) [Arabidopsis Thaliana] (GB:P46665;GB:Q0WTX1;GB:Q84TE1); similar to HAT22 (homeobox-leucine zipper protein 22), transcription factor [Arabidopsis thaliana] (TAIR:AT4G37790.1); similar to homeobox protein (GB:AAA56900.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057)|Identical to Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14) (HAT14) [Arabidopsis Thaliana] (GB:P46665;GB:Q0WTX1;GB:Q84TE1); similar to HAT1 (homeobox-leucine zipper protein 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17460.1); similar to homeobox protein (GB:AAA56900.1); contains InterPro domain Homeobox; (InterPro:IPR001356) 0.986928540566264 10.2793075395157 7.76595140273438e-07 3.8481124794306e-05 14.3365276570912 10.3136178629929 0.986928540566264 0.0879337876176414 AT5G02600_at 5.98378378459949 6.23462709638344 7.36310429098679 7.64405656708089 7.53444169531079 7.2374489842997 6.73495072816562 6.9001893240241 6.14180677028634 6.39908057435707 7.29896049041197 7.37375831017437 7.05477423190655 7.15270804448876 6.82813145597415 7.44237169010534 7.27525114624076 7.1209553622472 6.06566635970726 0.220468958461139 0.207496651269259 0.217283294030460 0.205880466637488 0.212599953847345 0.216980852309855 0.215382949685231 0.209597539172683 0.22945724198395 0.213409696862814 0.202992791760952 0.20270402625939 0.20270402625939 0.214438079911036 0.212164706001430 0.20270402625939 0.226661496072696 0.205111991799673 0.215547766283112 5 5|0 -|/ 585771 586437 586202.4 584160 586904 - gene protein_coding_gene TRUE TRUE AT5G02600.1|AT5G02600.2 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G53530.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE91607.1); similar to Os03g0819400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051712.1); similar to Os01g0976300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045566.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.986277212226562 10.2777526082937 7.77734767788131e-07 3.84936018760068e-05 14.3351990748636 13.6518495136366 0.986277212226562 0.0877926303637923 AT5G45130_at 10.3418131737188 10.5976053999025 11.3624362790184 11.3170301389838 11.3780359615514 11.1769739471005 10.0357684093744 10.1015528762415 10.1108308474256 10.0067689335064 10.9097719560840 10.7185700493819 10.7153868218338 10.7515567703759 10.5593586260981 10.725829799531 10.8210485409801 10.8007921478603 9.89066904185095 0.078256791599523 0.0776879872663172 0.0794258882830679 0.0776879872663172 0.0790101591233508 0.0801799914417413 0.0800122451358738 0.0829417808266825 0.0931013912625595 0.0816747063839832 0.0792384561811516 0.0776879872663172 0.078335991087364 0.0800815437045303 0.0831739860426072 0.080523611772781 0.0814344295030849 0.0831687473351188 0.0836085895627926 5 5 + 18262109 18263263 18262739.091 18261493 18263677 + gene protein_coding_gene TRUE TRUE AT5G45130.1 RHA1 small GTP binding protein Identical to Ras-related protein RHA1 (RHA1) [Arabidopsis Thaliana] (GB:P31582); similar to ARA7, GTP binding [Arabidopsis thaliana] (TAIR:AT4G19640.1); similar to ras-related GTP-binding protein [Nicotiana tabacum] (GB:CAA50609.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.893483590805686 10.2721066912823 7.81888021358843e-07 3.86550383736483e-05 14.3303731337754 21.165424829876 0.893483590805686 0.0579784547816784 AT5G04260_at 8.52732764602456 8.41850476172243 9.3395480871006 9.39724170443833 9.44868089562675 9.04749354632157 8.49960628952686 8.23402394984432 7.34508423341288 7.82599797324185 8.93048846548753 8.4983013742921 8.72326623722677 8.68806856215074 8.80925177621258 9.03008885821614 8.8156629133772 8.83960882800151 7.99606568161876 0.127941312959100 0.124829510058241 0.126565457031277 0.126840787337671 0.124645459183288 0.128254299834195 0.129362323866969 0.130864046315404 0.167445029116339 0.137022045514196 0.131955975385028 0.124124275213172 0.126046014697610 0.124907716047913 0.130804983432066 0.121851131739315 0.144383991059624 0.125069475255541 0.131800718093156 5 5|0 -|/ 1178947 1179953 1179562.125 1178645 1180037 - gene protein_coding_gene TRUE TRUE AT5G04260.1 thioredoxin family protein Identical to Thioredoxin-like 8, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8VZT6;GB:Q9FYD5); similar to (THIOREDOXIN-LIKE 5), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT5G06690.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); similar to Os02g0819200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048532.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.978917447019173 10.2688807331769 7.84271911037774e-07 3.87287328188532e-05 14.3276143603222 17.1211657382232 0.978917447019173 0.085946731068851 AT5G10810_at 8.08387708156953 8.23225051340129 8.51655217759966 8.96205356893434 9.20889760165776 8.48816242983553 7.6516279090814 7.51597795747207 6.50861507583957 5.79544814846951 7.74100320696203 8.15379797636786 7.77291624621328 7.946193816314 7.8955466265518 8.1005557904423 7.75385298493243 7.40507475815727 6.48971984222319 0.186646849647354 0.192501034971179 0.195121480874571 0.191134966180813 0.191421853632589 0.199006628653621 0.185690328393467 0.190071765669105 0.220192874761392 0.209071656606791 0.193609513661739 0.185690328393467 0.190279614768877 0.199937774368780 0.191844502687218 0.185690328393467 0.206138344126551 0.198351041558889 0.199307634286745 5 5|0 -|/ 3418922 3420261 3419755.889 3418667 3420636 - gene protein_coding_gene TRUE TRUE AT5G10810.1 ATER (Arabidopsis thaliana enhancer of rudimentary homologue) enhancer of rudimentary homolog ATER Identical to Enhancer of rudimentary homolog [Arabidopsis Thaliana] (GB:Q96319;GB:Q9LEV8); similar to rudimentary enhancer [Glycine max] (GB:CAA06199.1); contains InterPro domain Enhancer of rudimentary; (InterPro:IPR000781) 1.25225319967881 10.2655245803905 7.86760390625515e-07 3.87992662197655e-05 14.3247432181255 15.3877809205706 1.25225319967881 0.150701329342774 AT5G50340_at 5.22491555093534 5.31248721709144 6.20475946751378 6.68731539783053 6.69050409224883 5.84518667822153 5.31137595136969 5.29987442736125 4.60568159390359 4.45331809275871 6.15203966421109 6.17106921936088 5.75834650386597 6.15343830070491 6.03698588430403 6.29646206995457 5.92733763184462 5.82589714717425 4.21517516347722 0.206217487607747 0.200036145863014 0.211228972581366 0.203992810081085 0.208515668232365 0.214530189213098 0.200036145863014 0.207380333262765 0.212812139725426 0.201811920082644 0.200036145863014 0.200036145863014 0.200036145863014 0.212287232586811 0.201009294854386 0.203310144339585 0.227935010414513 0.200285354403276 0.214185340149912 5 5|0 -|/ 20509097 20510141 20509441.5 20508643 20513153 - gene protein_coding_gene TRUE TRUE AT5G50340.1 ATP binding / ATP-dependent peptidase/ damaged DNA binding / nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56731.1); similar to Os06g0151600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056828.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain DNA repair protein RadA; (InterPro:IPR004504); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984) 1.34262511244764 10.2644297610752 7.8757401776651e-07 3.87992662197655e-05 14.3238063883267 11.0545133491836 1.34262511244764 0.169135844674632 AT5G62950_at 5.79261935035355 5.44364311435382 6.66557259970251 6.4658565674592 7.9912407306552 6.6700012511747 4.37851233462321 4.67576146957331 4.30495770939268 4.0919040794771 6.44875993728794 6.4418174234663 6.06132684741681 5.94555749717451 5.48372658181636 6.6244389617623 5.51228654975388 5.9805593369206 4.95104250584938 0.273441811901644 0.267363684641231 0.278230858107386 0.273402135834082 0.267363684641231 0.275577429503041 0.280987200687358 0.268669872262700 0.280221598286909 0.281327362162847 0.276269611897183 0.267900240271186 0.267363684641231 0.273891849086854 0.26956678826021 0.267363684641231 0.280029107116583 0.268780373906109 0.280244301068642 5 5|0 -|/ 25279624 25280136 25279919.875 25279451 25281093 - gene protein_coding_gene TRUE TRUE AT5G62950.1|AT5G62950.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28956.1); similar to Hypothetical protein M106.7 [Caenorhabditis elegans] (GB:CAL36509.1); similar to Hypothetical protein CBG03003 [Caenorhabditis briggsae] (GB:CAE59596.1); similar to Os12g0488800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066791.1); contains InterPro domain HRDC-like; (InterPro:IPR010997); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28956.1); similar to Os12g0488800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066791.1); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590) 1.74427071519935 10.2622927063895 7.89164827477503e-07 3.87992662197655e-05 14.3219774025738 11.2662062139984 1.74427071519935 0.244473124735727 AT5G35410_at 3.91859834796835 3.73153463321466 4.58470620816698 4.82444833594463 5.1588877792117 4.75062707008203 3.39300298438804 3.0712464977441 3.17519147195291 3.55445465304366 3.55576615337602 3.85552436260205 4.09974841353477 4.66400585037 3.93280587522128 4.2646980848671 4.02073487300331 3.96838748380435 3.02966579762758 0.20430035703384 0.200833558913584 0.207043384004561 0.197129251931484 0.202988983381392 0.211657545892776 0.197825739635461 0.198458546740434 0.203035128875337 0.209343451112832 0.206216509782518 0.200536714230651 0.206202777795471 0.206221653934111 0.197129251931484 0.204832005625586 0.199034148687096 0.206221690286324 0.199715652592418 5 5|0 +|/ 13653666 13655078 13654567.8 13651684 13655525 + gene protein_coding_gene TRUE TRUE AT5G35410.1 SOS2 (SALT OVERLY SENSITIVE 2); kinase encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition Identical to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) (CIPK24) [Arabidopsis Thaliana] (GB:Q9LDI3;GB:Q9LKR2); similar to CIPK8 (CBL-INTERACTING PROTEIN KINASE 8), kinase [Arabidopsis thaliana] (TAIR:AT4G24400.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95978.1); similar to calcineurin B-like interacting protein kinase [Solanum lycopersicum] (GB:CAG30526.1); similar to CBL-interacting protein kinase 26 [Populus trichocarpa] (GB:ABJ91232.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.04658832270593 10.2621385171930 7.8927973980841e-07 3.87992662197655e-05 14.3218454241840 7.82828791274277 1.04658832270593 0.104217588287394 AT5G63810_at 8.41129038847333 8.01186780781135 7.72487824104584 7.42053963847972 9.17388155435573 8.51309916825475 6.1746690023878 5.54651770898858 5.38873680478351 5.86911130272708 7.33127638372424 6.91190306689278 7.0915311986618 7.28074142480772 7.27822315845532 6.31671458662416 7.16028696682349 6.49013452137747 4.82114420890043 0.197163308091527 0.192598393350629 0.204854942715645 0.191876162058382 0.206274578567505 0.198805683959116 0.200113124751758 0.198240454142289 0.222779052152339 0.219327009643902 0.195155091243002 0.191876162058382 0.191876162058382 0.198066364180608 0.195285125753054 0.197880401442428 0.197912312527259 0.194444454299240 0.222244474451858 5 5|0 +|/ 25557621 25558451 25558050.667 25554300 25558755 + gene protein_coding_gene TRUE TRUE AT5G63810.1 BGAL10 (beta-galactosidase 10); beta-galactosidase member of Glycoside Hydrolase Family 35 similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT5G56870.1); similar to BGAL8 (beta-glactosidase 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79283.1); similar to beta-galactosidase [Lycopersicon esculentum] (GB:AAF70823.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91080.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 1.39747536578464 10.2577118897139 7.92586526658252e-07 3.89176962587171e-05 14.3180555026828 13.7932256981702 1.39747536578464 0.180123869484891 AT5G62090_at 5.66982681059474 6.1158758123373 6.99558890953858 6.98663902084172 7.53913577104676 7.11628096021327 6.21058830677562 6.28597761537496 5.92771326252728 5.80358365118049 7.11952939327174 7.02121450331676 7.0551822614378 7.01203706861136 6.2535816168716 6.6016658073636 6.53224644220657 7.23014366590039 5.74797279330982 0.216939265449433 0.207937837123492 0.225056850676857 0.217682806092760 0.207937837123492 0.213200374575036 0.211113417896078 0.226089465740336 0.230516947888592 0.21928975631312 0.211640410432138 0.208496433359961 0.217625309427773 0.215229491607657 0.218032685764035 0.209445094271973 0.216852464693887 0.213481957046121 0.209685552109872 5 5 - 24952514 24953010 24952821.091 24952189 24956335 - gene protein_coding_gene TRUE TRUE AT5G62090.1|AT5G62090.2 similar to transcriptional co-regulator family protein [Arabidopsis thaliana] (TAIR:AT4G25520.1); similar to SEU1 protein [Antirrhinum majus] (GB:CAF18247.1) 1.05781044416969 10.2564067004365 7.93564401063781e-07 3.89216331270201e-05 14.3169376969841 12.9548008161129 1.05781044416969 0.107172342716364 AT5G27830_at 8.81751423774783 9.06086759207793 9.71949047698142 9.65384197090343 9.38155134391055 8.9976328832641 7.80440101948086 7.30872328569274 7.30307694816982 6.4784211539693 7.73006488644455 7.83212951463103 7.83639274750403 8.11536178731024 7.99208852666283 8.0376261106803 7.5460523296063 7.88721522126938 6.81733557295996 0.182065358794348 0.181757039749073 0.180543057956162 0.181906133401169 0.185618069258510 0.182752283854930 0.184923833721728 0.180438232870769 0.196579204560179 0.204220293860441 0.190519403990083 0.186709936971469 0.184276851941726 0.189728381825751 0.180994204244258 0.180438232870769 0.189176620726207 0.180806490718094 0.189225739584029 5 5|0 +|/ 9861985 9862695 9862296.9 9861293 9862900 + gene protein_coding_gene TRUE TRUE AT5G27830.1|AT5G27830.2|AT5G27830.3 similar to hypothetical protein MtrDRAFT_AC136288g4v1 [Medicago truncatula] (GB:ABE80618.1); contains InterPro domain Folate receptor; (InterPro:IPR004269)|similar to hypothetical protein MtrDRAFT_AC136288g4v1 [Medicago truncatula] (GB:ABE80618.1); contains domain Frizzled cystein-rich domain (SSF63501) 1.09804556691446 10.2551014811957 7.94543608259953e-07 3.89256263934276e-05 14.3158197066662 16.212199992364 1.09804556691446 0.116939425074827 AT5G51130_at 3.84488005335171 3.97250728102738 5.08837510966025 5.16603351479525 4.61547603025916 4.51809057756665 3.59693306746325 3.74491696937321 3.24431565397257 3.25690590954204 3.86090440429997 3.74134984380065 4.11609526333472 3.81616220349137 3.85910498118632 4.34945209061688 4.142975720542 3.74880318387708 3.42736527052134 0.195997133040519 0.198299250253281 0.201614942247912 0.199873219851888 0.193359936267289 0.197295138945992 0.195579275001834 0.202555420528961 0.211888110898010 0.203166938787294 0.198881326727909 0.205190983256921 0.198394249705171 0.193636413199117 0.200239049716195 0.195892613654966 0.200039871642610 0.194572238338660 0.193193952576471 5 5|0 +|/ 20799928 20801098 20800438.8 20799042 20801297 + gene protein_coding_gene TRUE TRUE AT5G51130.1 similar to Os08g0540500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062384.1); similar to PREDICTED: similar to bin3, bicoid-interacting 3 [Macaca mulatta] (GB:XP_001104039.1); similar to PREDICTED: bin3, bicoid-interacting 3 isoform 3 [Pan troglodytes] (GB:XP_527836.2); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Bicoid-interacting 3; (InterPro:IPR010675); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.851005740990705 10.2426796860778 8.03928682848901e-07 3.93409591807439e-05 14.3051718121186 7.95034402847324 0.851005740990705 0.040103415652875 AT5G66950_at 6.52083636172312 6.96538017928063 7.56400072263564 7.33620906871049 7.93311966705146 7.8584686425225 6.21162758032483 6.79900087269205 6.11641328154029 5.72880445820257 7.25242822714462 7.78230270864541 7.41373909868567 7.31476376485928 6.73616203501564 7.50905238507837 7.072160204538 6.58769034654836 5.89723984250798 0.24205590532804 0.237851917585382 0.253699662804899 0.252024122602380 0.237851917585382 0.240351547559798 0.237851917585382 0.23841906081484 0.256937599910597 0.247030564825295 0.258162028686864 0.237851917585382 0.241611734498540 0.254999776205637 0.248414129878226 0.248008919739527 0.254356861073256 0.243325745143809 0.248924160097822 5 5 + 26752667 26753124 26752860.727 26750115 26753372 + gene protein_coding_gene TRUE TRUE AT5G66950.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23520.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37100.1); similar to Os03g0765800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051377.1); similar to Os12g0590900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067168.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99048.1); contains domain MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) (PTHR14237); contains domain PLP-dependent transferases (SSF53383); contains domain no description (G3D.3.40.640.10) 1.17156154781117 10.2403084621426 8.05733866615981e-07 3.93848450195886e-05 14.3031375732164 13.7099253237333 1.17156154781117 0.134057441035328 AT5G42140_at 4.28589892311611 4.39655219096156 5.07126163212393 5.55517349188524 4.98106611080763 5.45278106630221 3.24188575190597 3.58093841395962 3.63029079896225 3.30611447753146 4.52803555523813 4.57878930134994 4.22680255458925 4.20328384515790 3.85361466475142 4.53283579805209 3.84414983135132 3.93615594478348 2.89118668078106 0.217141543287728 0.219477314813291 0.220271747041431 0.221184037347533 0.223507510947937 0.227692814469153 0.221948536756982 0.216780018455604 0.227855051277512 0.228795541583609 0.219357377934029 0.216780018455604 0.219986242495066 0.22190824202264 0.224884089854050 0.216780018455604 0.224430652003613 0.221919085191881 0.221445574357838 5 5|0 -|/ 16854783 16855411 16855168.2 16854608 16858868 - gene protein_coding_gene TRUE TRUE AT5G42140.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G19420.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to putative chromosome condensation factor [Triticum aestivum] (GB:AAW78916.1); similar to putative chromosome condensation factor [Triticum monococcum] (GB:AAK84081.1); similar to H0723C07.10 [Oryza sativa (indica cultivar-group)] (GB:CAJ86040.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 1.16292310322244 10.2367850833374 8.08424306197628e-07 3.94718552212468e-05 14.3001139461464 8.3151059089665 1.16292310322244 0.132235341192291 AT5G57760_at 5.11611080640001 5.55267945269051 2.51572913705969 2.45162316365561 3.13251159476295 3.31589188854976 2.68695077924565 2.70323428578542 6.62595995561112 4.60421593686543 9.64861414339643 9.89107965487135 9.58703823948899 8.94556982471082 8.84158573887204 8.91183847184667 7.99281808712204 8.19968634528682 6.50635314649451 0.298851613395314 0.291117582957784 0.305655694581705 0.305295839968509 0.311853692439083 0.305351338894342 0.302324437455548 0.301843082678711 0.305171992418763 0.298840766927591 0.298429936994883 0.302763979839517 0.298329726946797 0.306899623099099 0.300494382342767 0.294313441202116 0.291117582957784 0.29223917638849 0.291117582957784 5 5 + 23417968 23418161 23418062 23417941 23418493 + gene protein_coding_gene TRUE TRUE AT5G57760.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 0.964648790926158 10.2350060017026 8.09786511866842e-07 3.9493890718217e-05 14.2985867660453 10.8915689682802 0.964648790926158 0.0827402640935617 AT5G58900_at 6.75124526081949 6.96506843411475 6.879804333482 6.89858087831104 8.28665619084816 7.38519786255178 6.67071708971436 6.91329068741978 6.89900478629279 6.52542557663622 8.71311965948508 8.99430635211205 8.6159011914422 9.07248225999888 8.86720624008417 9.09186797173712 7.8913242270476 8.48738271891888 6.41006905710116 0.262934283360794 0.260215007609102 0.257069651182927 0.260834466128535 0.26258761983616 0.258946629168334 0.256461437150472 0.259532100192542 0.257062041473381 0.259268500025475 0.255575862196962 0.257614581583549 0.25350573221904 0.262874093160798 0.257463413552757 0.256344843233412 0.263904886275803 0.25796794481572 0.271136937084882 5 5 - 23800519 23801573 23800853.364 23800349 23802560 - gene protein_coding_gene TRUE TRUE AT5G58900.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G38090.1); similar to MYB-like transcription factor DIVARICATA [Antirrhinum majus] (GB:AAL78741.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.32133923460384 10.2300396798497 8.13602328661607e-07 3.96167471192437e-05 14.2943220619364 14.7579194092977 1.32133923460384 0.165766313334126 AT5G66730_at 7.02996441489273 7.22120346138383 8.17602408828756 8.18995055610018 8.76063056193665 8.50798041811876 7.63058866297935 7.69670808742653 7.62577159973717 7.79010602329727 8.73526525914925 8.46796520867052 8.74369303177671 8.78750608738803 8.21111203030421 8.6206393160436 8.37318023720977 8.46047984244636 7.96670311860832 0.123494295650171 0.125111613778671 0.118165066336237 0.118458249717006 0.113257017914690 0.119162878251106 0.120750934923867 0.117222530713095 0.134459065467946 0.12101010280689 0.115070280558443 0.116077316454942 0.118904209896601 0.115248164302622 0.113328745703968 0.113484342750006 0.119925367334861 0.123631758916141 0.115650585815926 5 5 - 26659213 26659695 26659465.909 26658878 26661628 - gene protein_coding_gene TRUE TRUE AT5G66730.1 zinc finger (C2H2 type) family protein similar to ATIDD2 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 2), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G50700.1); similar to BAC19.12 [Lycopersicon esculentum] (GB:AAG01127.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.884908397758072 10.2293509705402 8.14133030364516e-07 3.96167471192437e-05 14.2937304678156 16.0737181349763 0.884908397758072 0.0560681602027778 AT5G42080_at 9.7987889497324 9.95694934970305 10.6682051492830 10.7773416258901 10.8154703710152 10.6648739714731 9.74602868465833 9.87175354591344 9.3036866711686 8.99368902800816 9.93144691013463 9.79184214642186 10.0271963036278 9.95008343767693 10.0648489480869 9.79994392089012 10.0147036078589 10.0965918949241 9.06400957353224 0.113217590747799 0.105901487767777 0.117876259643578 0.114459732366504 0.105901487767777 0.117080059002233 0.112920128784750 0.111200472553602 0.114323910667114 0.118078391470035 0.108239490516376 0.105901487767777 0.108463645902566 0.114827684115249 0.109874521008084 0.109436662504257 0.116497849020339 0.105901487767777 0.11142847959003 5 5 - 16838792 16839816 16839120.273 16837512 16841981 - gene protein_coding_gene TRUE TRUE AT5G42080.1|AT5G42080.2 ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. Identical to Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) (DRP1A) [Arabidopsis Thaliana] (GB:P42697;GB:Q39118;GB:Q8L9V5;GB:Q8LPS7); similar to dynamin-like protein B (DL1B) [Arabidopsis thaliana] (TAIR:AT3G61760.1); similar to ADL1C (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G60190.1); similar to SDL5A (GB:AAC49183.1); similar to SDL (GB:AAB05992.1); similar to Dynamin central re (GB:ABE94040.1); contains InterPro domain Dynamin GTPase effector; (InterPro:IPR003130); contains InterPro domain Dynamin central region; (InterPro:IPR000375); contains InterPro domain Dynamin; (InterPro:IPR001401)|Identical to Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) (DRP1A) [Arabidopsis Thaliana] (GB:P42697;GB:Q39118;GB:Q8L9V5;GB:Q8LPS7); similar to dynamin-like protein B (DL1B) [Arabidopsis thaliana] (TAIR:AT3G61760.1); similar to ADL1C (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G60190.1); similar to SDL5A (GB:AAC49183.1); similar to SDL (GB:AAB05992.1); similar to Dynamin central re (GB:ABE94040.1); contains InterPro domain Dynamin central region; (InterPro:IPR000375); contains InterPro domain Dynamin; (InterPro:IPR001401) 0.863606517773265 10.2140991120186 8.25982585144935e-07 4.01483016802114e-05 14.2806178893523 19.8274484078447 0.863606517773265 0.0475228080598785 AT5G04740_at 7.7659272249909 8.05784510879608 8.78580278324596 8.71118046110397 9.05849675986982 8.46919358295334 8.08240237330592 8.33623266675913 7.54563180813627 8.33782935923802 9.67603479493288 9.68274583913861 9.2889085647808 9.43104896727226 9.7808873005689 9.6056410372822 8.5244961745214 9.86735885051412 7.94368899395878 0.171706465194694 0.172724322068403 0.168581967342453 0.170750369962601 0.165215251907618 0.180093980759411 0.167108779020893 0.172345964587467 0.193522851594134 0.165152716162667 0.163225876476653 0.163225876476653 0.164556887388378 0.173480615367413 0.166629051731009 0.163759807658731 0.181328766819673 0.171736342055090 0.182147526283140 5 5|0 -|/ 1368723 1370360 1369341.286 1368543 1371481 - gene protein_coding_gene TRUE TRUE AT5G04740.1 ACT domain-containing protein similar to uridylyltransferase-related [Arabidopsis thaliana] (TAIR:AT1G16880.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58487.1); similar to Os08g0242700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061342.1); similar to Os12g0152700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066177.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) 1.11766167867282 10.2096196240869 8.29498294096161e-07 4.02740384825483e-05 14.2767625655088 17.1206469092468 1.11766167867282 0.122672761166011 AT5G16310_at 5.33303258060452 5.22816396684046 6.10534047110522 6.20500834481365 7.06901109517726 6.73130180650229 4.88212632410514 5.02445210067062 4.67142846275285 4.60217834027443 4.89179339809062 4.98717222613772 5.55516459890384 4.97374259338613 4.87854912438335 5.3102453598173 4.8856873424468 5.23516969695508 4.73195025235246 0.249694451799278 0.233125535505819 0.235624348510661 0.239583882900043 0.241056806250338 0.247659656348887 0.240906620468702 0.233125535505819 0.255577667436043 0.237106644640493 0.239513973062331 0.234675375083152 0.235722949065960 0.238234506983629 0.233125535505819 0.235542755054630 0.24679970215933 0.237327443128512 0.233125535505819 5 5 - 5342589 5343080 5342869.636 5342394 5344288 - gene protein_coding_gene TRUE TRUE AT5G16310.1 ubiquitin carboxyl-terminal hydrolase family 1 protein similar to ubiquitin carboxyl-terminal hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G65650.1); similar to ubiquitin carboxyl-terminal hydrolase isozyme L5 [Dictyostelium discoideum AX4] (GB:XP_638105.1); similar to Os02g0180100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046089.1); similar to Os02g0822200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048557.1); contains InterPro domain Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1; (InterPro:IPR001578) 0.915946605199804 10.2071538245105 8.3144049890373e-07 4.03231822266667e-05 14.2746395422771 10.7014093667149 0.915946605199804 0.0681833841495517 AT5G16880_at 9.76012720248403 9.86697015796385 10.6738091724426 10.6828729418291 10.7329718856979 10.6036407835402 9.08862322136766 9.27969795625785 9.70067465879542 9.32170734206403 10.1086793162761 9.96632696777475 9.93191434999153 9.93936310349724 9.77885465942685 10.1063841442405 9.95777978284834 10.0698771875476 9.31877806145317 0.0938328438041578 0.0896530815465122 0.0921330797119397 0.0910248288593331 0.0946677000714654 0.0914450744795043 0.092892533099671 0.0977587131394612 0.102238124975558 0.0942288169508002 0.0917422228971928 0.0896530815465122 0.094421303782006 0.0983506698428203 0.0929070147496742 0.0896530815465122 0.0964058713004193 0.0952715384025403 0.0953820163742566 5 5 + 5550585 5551253 5550955.636 5548917 5551466 + gene protein_coding_gene TRUE TRUE AT5G16880.1|AT5G16880.2|AT5G16880.3 VHS domain-containing protein / GAT domain-containing protein similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G06210.1); similar to Os02g0697300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047818.1); similar to hepatocyte growth factor-regulated tyrosine kinase substrate-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAL58181.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain VHS; (InterPro:IPR002014); contains InterPro domain ENTH/VHS; (InterPro:IPR008942) 0.85490657310262 10.1977953700843 8.38856811281269e-07 4.06334711080643e-05 14.2665768295565 19.8008145617252 0.85490657310262 0.0440299690647337 AT5G05460_at 6.80077042474378 6.99151565326003 7.648112350028 7.31702303204632 7.40831243978404 7.06221052785662 4.01663877288379 3.46078728986796 6.11215852872535 4.31538515487941 5.19026837959176 5.7425190562694 5.30437720030141 5.90172383449756 4.55633060123101 5.54973791516326 4.98877038568792 6.03799280295801 5.00145583216009 0.278006616423698 0.268809079948736 0.273227809209526 0.274293763391338 0.272766133821127 0.278916718835491 0.280457988870991 0.276531479879972 0.276352563281428 0.280396052607241 0.272129879346516 0.271692041919992 0.268809079948736 0.271697869505523 0.278573331099036 0.268809079948736 0.281298681564979 0.270014766541075 0.272860770019793 5 5 + 1618230 1618703 1618418.3 1615616 1618903 + gene protein_coding_gene TRUE TRUE AT5G05460.1 hydrolase, acting on glycosyl bonds similar to glycosyl hydrolase family 85 protein [Arabidopsis thaliana] (TAIR:AT3G11040.1); similar to Os05g0346500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055263.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV43808.1); contains InterPro domain Glycoside hydrolase, family 85; (InterPro:IPR005201) 1.15372586780706 10.1967209644427 8.39712833664996e-07 4.06334711080643e-05 14.2656506558392 11.6141537415842 1.15372586780706 0.131197953548502 AT5G42970_at 6.14361988615623 6.1587580515011 7.58047077317362 7.5973880244974 7.68574063904759 7.09736993283864 6.81592764042154 6.37894990590802 5.26781232860103 5.35282986535097 6.37991895715595 6.76482271181187 6.34661283319578 5.96922296163935 6.55877251560656 6.56158384880301 6.45514296596051 6.34415066455432 5.18814393024743 0.226790887762346 0.217888436391399 0.222572811374265 0.224086915833526 0.229716698484494 0.233824535233841 0.225343999450327 0.223059537958315 0.229808104369054 0.219201910857247 0.225768006787932 0.218155469093780 0.232750005761458 0.230102453791651 0.220089671548678 0.217562017359754 0.235493851147257 0.216484565022866 0.218172422040502 5 5 - 17254698 17255914 17255441 17254393 17257961 - gene protein_coding_gene TRUE TRUE AT5G42970.1 COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. Identical to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4) (CSN4) [Arabidopsis Thaliana] (GB:Q8L5U0;GB:Q9FMM1;GB:Q9SW74); similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.2); similar to Os03g0197400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049272.1); similar to COP8-like protein [Lilium lon (GB:AAQ07984.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 1.13443076450018 10.1949019874126 8.41164249230505e-07 4.06583271074788e-05 14.2640823890944 12.7783400102300 1.13443076450018 0.126891084130527 AT5G55130_at 7.11026528491806 7.24221776559032 8.50734782077011 8.14791830775512 7.91005167877048 7.57537495354237 6.77951312704038 6.59258593807386 6.28988064134619 5.58072629406508 6.96359736994527 6.96227742128838 6.84140406750106 6.8595514312989 6.59579301315448 6.8707385610963 7.0940288061377 6.94659842438198 6.11911649481596 0.220779056704451 0.226345683362471 0.227696812699929 0.226112603304886 0.223808721511801 0.233486266227931 0.231280859089394 0.225352846945647 0.238385822609129 0.243975660830304 0.220779056704451 0.220779056704451 0.225495143815383 0.228575416777879 0.225334981927456 0.225910072244835 0.245152731910732 0.235789899286027 0.232286576017450 5 5 - 22390664 22391318 22390919.727 22390394 22393312 - gene protein_coding_gene TRUE TRUE AT5G55130.1|AT5G55130.2 CNX5 (SIRTINOL RESISTANT 1); Mo-molybdopterin cofactor sulfurase putative molybdopterin synthase sulphurylase (cnx5) Identical to Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) (CNX5) [Arabidopsis Thaliana] (GB:Q9ZNW0); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to molybdopterin synthase sulphurylase [Nicotiana plumba (GB:AAD18052.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain MoeZ/MoeB; (InterPro:IPR007901)|Identical to Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) (CNX5) [Arabidopsis Thaliana] (GB:Q9ZNW0); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to molybdopterin synthase sulphurylase [Nicotiana plumba (GB:AAD18052.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain MoeZ/MoeB; (InterPro:IPR007901) 0.999600910705981 10.1923413759601 8.43212055243809e-07 4.07119226423496e-05 14.2618741801657 13.9273209163540 0.999600910705981 0.0937616678601755 AT5G57580_at 8.90606393586562 9.06592679808645 9.457271967317 9.80841934704789 10.0542462162062 9.72773709879633 7.9982733644928 8.06271959690065 8.65419939216608 7.7582731580211 8.7832038779054 8.6847680915588 8.75903840807783 9.03222177515226 8.30783556896592 8.88153373785121 8.32295508222795 9.03241181202004 7.6523357076225 0.158730578308289 0.16210342401103 0.164803493030953 0.162220347654814 0.161018205248795 0.165185786918361 0.181119639376804 0.168194372925663 0.159737729241135 0.170702388492157 0.155878019186887 0.157756554369926 0.155878019186887 0.156195201385244 0.165678437001104 0.15860412552678 0.180814663239559 0.156545165339814 0.163327875521124 5 5 - 23332422 23332756 23332586.6 23331942 23335351 - gene protein_coding_gene TRUE TRUE AT5G57580.1 calmodulin-binding protein similar to calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G18750.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to Os02g0562300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047151.1); similar to calmodulin-binding protein (GB:AAB37246.1); similar to Os04g0444200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052891.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 0.978783012561085 10.1855348616264 8.48681816946684e-07 4.08670253033287e-05 14.2560014074853 17.5086316890007 0.978783012561085 0.0881767664560487 AT5G45620_at 8.09563104679147 8.28066265164718 8.98985223849994 9.02456129586038 9.35426640181539 8.99252392547028 8.13487477101084 8.1966302160472 7.85163836809852 7.3527716097361 8.5025034882375 8.42446087202697 8.54077785216749 8.5421600972642 8.52982764408645 8.38360753742802 7.92355738568761 8.57354799441329 7.27729398158981 0.178837826155815 0.166546127360972 0.186706897237797 0.185566344358744 0.173191996277605 0.185633725916829 0.171749800188494 0.176090707950129 0.186979728095255 0.18410793086587 0.173629051672382 0.178432134737289 0.183423545165216 0.170301377955556 0.163434222504191 0.172466746718318 0.181049100445779 0.175810054289112 0.179030025408102 5 5|0 +|/ 18519654 18520509 18520174.667 18518713 18521344 + gene protein_coding_gene TRUE TRUE AT5G45620.1|AT5G45620.2 26S proteasome regulatory subunit, putative (RPN9) similar to 26S proteasome regulatory subunit, putative (RPN9) [Arabidopsis thaliana] (TAIR:AT4G19006.1); similar to RPN9 [Nicotiana benthamiana] (GB:ABB18115.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to 26S proteasome regulatory subunit, putative (RPN9) [Arabidopsis thaliana] (TAIR:AT4G19006.1); similar to RPN9 [Nicotiana benthamiana] (GB:ABB18115.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.923502666571565 10.185383695825 8.4880373130419e-07 4.08670253033287e-05 14.2558709296229 16.5943536577539 0.923502666571565 0.071375927239415 AT5G60850_at 7.6523520828685 7.88681697864023 8.55569474299174 8.86945792625775 9.80162552422425 9.25480669987055 8.40019544970547 8.6028454634335 8.03560445160129 7.8082821548383 9.53836676558483 9.08746219905562 9.6367981055785 9.22303923406376 8.68188213850892 9.18738949866924 9.19756323170276 8.89635823209843 7.99306762046915 0.140813441739242 0.145453265278510 0.139491890564283 0.145253393362974 0.149598767102160 0.145317849958717 0.142292728436027 0.142700812445296 0.150556583786539 0.160276446588182 0.139730709993638 0.141976115844141 0.137988495971449 0.150195986803104 0.140335339172478 0.137988495971449 0.146980996051781 0.146093655254433 0.148694957425758 5 5 + 24498139 24498700 24498424.455 24497675 24499099 + gene protein_coding_gene TRUE TRUE AT5G60850.1 OBP4 (OBF BINDING PROTEIN 4); DNA binding / transcription factor Encodes a zinc finger protein. Identical to Dof zinc finger protein DOF5.4 (AtDOF5.4) (OBF-binding protein 4) (DOF5.4) [Arabidopsis Thaliana] (GB:Q8LDR0;GB:Q9FJH1;GB:Q9XGU5); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37590.1); similar to Dof4 [Glycine max] (GB:ABI16005.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) 1.11014987318117 10.1843586008019 8.49630966477576e-07 4.08670253033287e-05 14.2549860681604 17.1913537758127 1.11014987318117 0.121570005535447 AT5G02620_at 8.08714128477756 8.33325122737239 8.88880996540974 9.15849321742733 9.01558952162725 8.69155297617607 7.88890758167508 8.0484267708787 7.3066891973049 7.33768756071123 8.44243453036776 8.51143952365054 8.62042251662748 8.55315242917414 7.99576683268004 8.60868523410214 8.52821099972205 8.38859362219892 7.3849877329481 0.189748078366398 0.184906450817812 0.193217394805702 0.188692262047083 0.195426837293057 0.193518997266888 0.191951893811505 0.184862491615647 0.209123506032134 0.190739441815024 0.182830673483783 0.182432971016620 0.198083063612264 0.180331928892780 0.191905920983678 0.188148885907999 0.198428216813478 0.207301298859027 0.205992381096536 5 5 + 591009 591465 591198.364 589525 591675 + gene protein_coding_gene TRUE TRUE AT5G02620.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G07710.1); similar to Ankyrin [Medicago truncatula] (GB:ABE80012.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.981073209030736 10.1836605837920 8.50194755932585e-07 4.08670253033287e-05 14.2543834836066 16.4136264221947 0.981073209030736 0.0888741791147003 AT5G08535_at 6.48932171031458 6.76912276187538 7.72128859804033 7.81766845181687 8.06958764594748 7.96938863724771 6.40932113070094 6.92103141024966 6.62051556070409 6.26566306272652 7.15618833828261 7.2297209030152 7.52255427599318 7.63018396824294 6.93416123678657 7.60822887078262 7.30137062751313 7.09203140835297 6.56396045550047 0.178026951970752 0.167491390527299 0.170508490400550 0.178866420506795 0.169147255371608 0.178727537805787 0.177818324244765 0.166234122992852 0.172750030871229 0.184388022035329 0.169121263189048 0.166234122992852 0.173883071159676 0.168682629614159 0.17535570571781 0.170236128617518 0.169593569285742 0.168099922388239 0.170723118791564 5 5|0 +|/ 2762460 2763286 2762765.1 2762030 2763437 + gene protein_coding_gene TRUE TRUE AT5G08535.1|AT5G08535.2 D111/G-patch domain-containing protein similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52350.1); similar to Os10g0491900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064928.1); similar to Y55D9A.2a [Caenorhabditis elegans] (GB:NP_502414.1); contains InterPro domain D111/G-patch; (InterPro:IPR000467) 1.03660467031104 10.1820396906764 8.51505521398947e-07 4.08847042446354e-05 14.2529840209301 14.1671836165732 1.03660467031104 0.103755609742929 AT5G20200_at 4.76035793932855 5.06278404980868 5.77515877116174 5.86946797257954 5.95030239231298 5.42950209102337 4.49913507073847 4.63233334598683 4.49436290276352 4.28341264172585 5.33528226089038 5.8923818004065 5.52219475146459 5.51451080151537 5.34090144848749 5.88117872789092 5.15373717494453 5.30819586970396 4.43872067440151 0.208979264848247 0.201185981023307 0.204050393500162 0.19730682051728 0.19730682051728 0.214837960173243 0.200858738961637 0.197610927006030 0.217874363812424 0.201173454832458 0.21173605054415 0.201385285463717 0.202239609759623 0.205083405416602 0.200555890879311 0.203026027155772 0.205458837891377 0.20211456273903 0.198377927757460 5 5 + 6820787 6821598 6821231.636 6816709 6821812 + gene protein_coding_gene TRUE TRUE AT5G20200.1 nucleoporin-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10650.1); similar to Leishmania major strain Friedlin proteophosphoglycan ppg4 [Leishmania major strain Friedlin] (GB:XP_843162.1) 1.05275216004323 10.1759962080584 8.56412073186099e-07 4.10748033608639e-05 14.2477639564355 10.1969035011391 1.05275216004323 0.107979802430366 AT5G63710_at 7.69418208104878 7.79272960889215 8.4554717789534 8.53778511426005 9.05321737739213 8.8834718950288 8.2846018293274 7.58753926066796 6.34620229062167 6.12188275362818 7.38355477573993 7.7372292984844 7.47640967885597 7.34531296165989 7.29618303823518 8.09611769148555 8.37290639951812 7.46591316530316 6.37826630979362 0.198956164136107 0.189893812386185 0.195096073846260 0.195463558193256 0.204439093092944 0.19874170358937 0.189380408890020 0.188731513033270 0.213256505464574 0.216479362535819 0.198425717198987 0.185984987861175 0.191847904013896 0.188949873466631 0.198494035109307 0.185984987861175 0.188010349042357 0.190124768198331 0.213930402220145 5 5 + 25519218 25519748 25519464.364 25516640 25520024 + gene protein_coding_gene TRUE TRUE AT5G63710.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10290.1); similar to Protein kinase [Medicago truncatula] (GB:ABE86996.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.12865480228515 10.1730284639274 8.58832741694604e-07 4.114538743231e-05 14.2451993033976 15.2505351152837 1.12865480228515 0.126127868101631 AT5G39990_at 5.92849588211687 6.5194758670006 7.06472289520749 6.9514389066103 7.34526343237621 6.94749185171693 5.73100460646702 5.89476930904974 4.15181043393999 4.25033881842454 5.65380741853389 5.95478327146821 5.60004336867813 5.64046883481019 5.51588499659675 5.6031283840884 4.98954455021609 5.28510986327362 4.5471762076418 0.241291629232884 0.236572832586139 0.25002676007521 0.25168510204425 0.234955383326961 0.25770010920813 0.244696312369955 0.242005567839762 0.257293143255620 0.25079746944729 0.245166657451697 0.235980807256564 0.24038177682984 0.259205038726076 0.237859769436856 0.239840394074509 0.258254146635909 0.262434461749419 0.248929953062206 5 5|0 +|/ 16022700 16023530 16023262 16021509 16023968 + gene protein_coding_gene TRUE TRUE AT5G39990.1 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G15050.1); similar to BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Ae (GB:CAH05144.1); similar to Os12g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067391.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) 1.13634868563761 10.1681326861648 8.62842281102041e-07 4.12295867211528e-05 14.2409666738372 11.4712269217983 1.13634868563761 0.128005683235397 AT5G50915_at 2.62910054904156 3.42540743356952 4.49882727139385 5.31810215174578 6.52296087950336 6.50282808657758 5.24639249380877 6.07196764260463 4.65512978835725 5.38080865455481 7.69942010420984 6.54402389863633 7.19024878621282 6.94332941405379 7.58309727263198 6.29409432223851 5.19923777323713 6.3262362664879 3.88167285269951 0.272121919815657 0.265843438482007 0.262541176523686 0.264503289226390 0.259784743718326 0.258586405780813 0.258717723648165 0.261660012977076 0.265290425907525 0.252050018786054 0.260452948314057 0.254317735721404 0.267623083711493 0.253976499060082 0.258856298498127 0.255770919822932 0.26890896644374 0.258121840017878 0.257858826903592 5 5 - 20728192 20728977 20728508 20727435 20729541 - gene protein_coding_gene TRUE TRUE AT5G50915.1|AT5G50915.2 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.3); similar to bHLH transcription factor GBOF-1 [Tulipa gesneriana] (GB:AAD56411.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.72535989102935 10.1677937994041 8.63120573422234e-07 4.12295867211528e-05 14.2406736066112 10.7077806859893 1.72535989102935 0.24395770987253 AT5G43260_at 10.2483697121094 10.4146104084371 11.1865489079549 11.2920940885863 11.5378448701953 11.2600969399438 10.5771233895064 10.5799734840945 10.0135037942574 9.7271184523533 10.6921210741712 10.5772468183721 10.9833509984168 10.9122798490339 10.0492107361497 10.9052509581582 11.0469257330425 10.5548280345183 9.67635542026558 0.0797060976292443 0.0797060976292443 0.0871422574410499 0.0874084351886984 0.0824074055102431 0.0904630996427494 0.0811371406197645 0.0797060976292443 0.086013268047358 0.0871371697565208 0.0814714842098914 0.0797060976292443 0.0824588598001026 0.0861805672549378 0.0867682820927766 0.079778137933658 0.0843866980006428 0.0857644417798914 0.0827189925494328 5 5 - 17374921 17375185 17375046.364 17374615 17375310 - gene protein_coding_gene TRUE TRUE AT5G43260.1 chaperone protein dnaJ-related similar to drought-induced protein 1 [Glycine latifolia] (GB:AAO91809.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.886809753036946 10.1674012815693 8.6344302916407e-07 4.12295867211528e-05 14.2403341460031 21.1474882238659 0.886809753036946 0.0589219466439444 AT5G56360_at 7.32964296524942 7.67620460674893 8.31875107033922 8.41985441085608 8.40719408450724 7.99985817541801 7.32413319607638 7.14827956912792 6.51322984894152 7.14921286447566 8.04338122477598 8.3048002303387 7.7230258830179 7.89630898252668 8.46833132854335 7.61598727433763 7.6389548073142 7.7053849526609 6.76303486077602 0.187044537961673 0.182993595424431 0.187834738182935 0.188508532540553 0.182214836499352 0.187701336168218 0.188701457256826 0.191699636920134 0.202084036980433 0.197767095810011 0.182443805205313 0.179284301090101 0.180631298645476 0.186214838538844 0.179284301090101 0.182964903638551 0.203508805911663 0.186428975347212 0.198820351261743 5 5|0 -|/ 22840815 22842095 22841470.143 22840528 22845251 - gene protein_coding_gene TRUE TRUE AT5G56360.1 calmodulin-binding protein similar to protein kinase C substrate, heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G42390.1); similar to Os01g0276800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042732.1); similar to protein kinase C substrate 80K-H [Xenopus tropicalis] (GB:NP_989356.1); contains InterPro domain Mannose-6-phosphate receptor, binding; (InterPro:IPR009011); contains InterPro domain Glucosidase II beta subunit-like; (InterPro:IPR012913) 1.01643933084391 10.1648427874571 8.65548054956869e-07 4.12616163644045e-05 14.2381211309192 15.1944969398756 1.01643933084391 0.0989857395074368 AT5G51300_at 6.69646537617819 7.00543986662987 7.44357693518709 7.81257332386483 7.84019050078563 7.82643018360575 6.41380940825966 6.71153417185417 6.43618541228608 6.00608509432508 7.27739187272448 7.35840481866806 7.10281286712435 7.55868446594426 7.28689283634594 7.81982826328937 7.59807347663763 7.49404668131715 6.86537512612062 0.166952282289208 0.168124574857587 0.166378847295274 0.171140899495899 0.170742265368992 0.169531137289359 0.172937573757023 0.165957344143083 0.176466176648915 0.177352344542331 0.165916533730691 0.163374953881718 0.163374953881718 0.164243220930963 0.167036206707784 0.163374953881718 0.184878667144835 0.174703407114115 0.166339844471078 5 5 - 20867194 20867617 20867378.727 20866123 20869560 - gene protein_coding_gene TRUE TRUE AT5G51300.1|AT5G51300.2|AT5G51300.3 splicing factor-related|nucleic acid binding / nucleotide binding / zinc ion binding similar to KH domain-containing quaking protein, putative [Arabidopsis thaliana] (TAIR:AT1G09660.1); similar to OSJNBa0044M19.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE05015.1); similar to Os04g0385700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052619.1); similar to Splicing factor 1/branch point binding protein (RRM superfamily) (ISS) [Ostreococcus tauri] (GB:CAL55634.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain KH, type 1; (InterPro:IPR004088) 1.01250778140475 10.1642735736929 8.66017138441119e-07 4.12616163644045e-05 14.2376286952586 14.1552018647125 1.01250778140475 0.0979637601151354 AT5G54690_at 1.35127451883811 1.30805378665757 2.58971429170221 2.72504570672239 2.60560749963170 1.9770821251612 1.36523270384120 1.71057994843288 1.79139016972969 1.5042575423175 2.88861648581084 2.69143093401751 2.49178784295883 2.66247286730229 2.69009872954419 2.62602908638756 4.13712227768113 2.94055424691008 1.72838810463074 0.215258923935956 0.204050620398056 0.223099987277625 0.213030016439896 0.208965231246557 0.20806800296954 0.214017537868418 0.20944435524213 0.225363269774312 0.204040903288631 0.206917345016272 0.208058636426172 0.21002265745128 0.210513595619834 0.206731148492398 0.207154833218233 0.223125464792920 0.211115084251305 0.213381518385818 5 5 - 22236729 22237253 22236927.818 22236450 22239066 - gene protein_coding_gene TRUE TRUE AT5G54690.1 GAUT12/IRX8/LGT6 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to Os12g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067123.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94604.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 1.12845630981459 10.1558631503462 8.7298035102133e-07 4.15311810056799e-05 14.2303491393982 4.23692015481634 1.12845630981459 0.126518404115993 AT5G24010_at 2.64332262930107 2.9216509614233 3.77798693028238 4.21585828400765 3.59468530231114 4.04964961140004 3.03439608902723 3.11210762144372 3.07290410164855 3.44048651307277 5.02200046975054 4.21930088513663 4.82628991707632 5.01327002971613 4.61052002026167 4.35914457156872 4.06879098014174 4.24767847870967 3.46440340742731 0.223041372064360 0.216654725912281 0.220814207976436 0.218022992287885 0.219891050982253 0.233792927494052 0.215043901718451 0.221646725203603 0.230306325793236 0.215104840049886 0.223483442421528 0.218942735940745 0.237659555320374 0.227355869812324 0.230739275308088 0.216039133893674 0.218091958916912 0.229728142098335 0.218449944295722 5 5 + 8115810 8116352 8116141.818 8113798 8116618 + gene protein_coding_gene TRUE TRUE AT5G24010.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59700.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to Protein kinase [Medicago truncatula] (GB:ABE85317.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT07653.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.10080939251522 10.1533290461906 8.75090302754751e-07 4.15311810056799e-05 14.2281544604737 7.35461005853026 1.10080939251522 0.120173921906348 AT5G42190_at 10.3964352502071 10.5148231867673 11.2027344835213 11.2326106319041 11.5010975822624 11.5328897048604 10.4296264908290 10.5439333166930 10.5967680072657 10.1069253576499 11.2122969138240 10.8853270702810 11.1739574994308 11.1746928739207 10.8685038909854 11.0026971580710 11.0094337930797 11.2311485940476 10.2362114628981 0.0688762815420644 0.0677721883100054 0.0687084898310437 0.0677721883100054 0.0713293627332673 0.0711566648602151 0.0699735355309388 0.0729455574920509 0.0762185969380841 0.068582721436402 0.0677721883100054 0.068489302297098 0.0703655896575721 0.0694703315341145 0.0711588288346985 0.0700317204380328 0.0711935822962534 0.06911617703601 0.0694144968920898 5 5|0 -|/ 16871734 16872659 16872319.2 16871419 16872866 - gene protein_coding_gene TRUE TRUE AT5G42190.1 ASK2 (ARABIDOPSIS SKP1-LIKE 2); ubiquitin-protein ligase Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis. Identical to SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2) (SKP1B) [Arabidopsis Thaliana] (GB:Q9FHW7;GB:O65283); similar to SKP1 (ARABIDOPSIS SKP1 HOMOLOGUE), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G75950.1); similar to SKP1-like protein [Silene latifolia] (GB:BAE72121.1); contains InterPro domain SKP1 component; (InterPro:IPR001232) 0.826292077223369 10.1531560410348 8.75234552489045e-07 4.15311810056799e-05 14.2280046059789 21.6107982476187 0.826292077223369 0.0294625640171752 AT5G09850_at 8.00158074661336 7.96578302749179 8.6388110201945 8.61394583798677 9.05761369839252 8.51373663350353 7.97481664072392 8.2029070870593 7.78645149255613 8.1009369027118 9.59055131307521 9.40049563710474 9.32164942209585 9.36599539916898 9.23074181534975 9.42570752464147 8.8087712227741 9.18300716775243 7.82575694901464 0.127135421996220 0.126267138805549 0.133269055635222 0.124782559481154 0.125700935315658 0.136267407420170 0.126159886114821 0.125919815346077 0.139568361315212 0.134059385804944 0.125969900630999 0.127024821212420 0.123401739812482 0.129155007703840 0.130583076632791 0.126064501696077 0.139560677048816 0.126242771567074 0.146701571340958 5 5|0 -|/ 3063548 3064517 3064034 3063252 3065890 - gene protein_coding_gene TRUE TRUE AT5G09850.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G05140.1); similar to 52O08_11 [Brassica rapa subsp. pekinensis] (GB:AAZ67557.1); contains InterPro domain RNA polymerase II transcription factor SIII subunit A; (InterPro:IPR010684); contains InterPro domain Transcription factors TFIIS, elongin A, CRSP70, conserved; (InterPro:IPR010990); contains InterPro domain Transcription elongation factor S-II, N-terminal; (InterPro:IPR003617) 1.02811903918252 10.1528300636965 8.75506418848616e-07 4.15311810056799e-05 14.2277222415594 16.9687726960821 1.02811903918252 0.102340622727362 AT5G64300_at 8.53318806540318 8.6966319135344 9.55271294248783 9.6019707946422 9.70215787134244 9.30229929382546 8.59800271476136 8.64944890477463 8.86629549012658 8.47377437444833 9.60626551630247 9.61735964916492 9.5646011928059 9.52804922614623 9.50271511624982 9.71060142203051 9.1444693488205 9.42662235255754 8.35588513588529 0.122394585870824 0.121179085594995 0.123984527734447 0.123485466024777 0.125879498410060 0.135449169792008 0.121179085594995 0.125073907868057 0.137898363314538 0.126578074000613 0.125186634597414 0.122137631482828 0.125413161729400 0.125086216852998 0.123250977406079 0.121767946037938 0.132711241831530 0.128300736464463 0.133592024212341 5 5 + 25737251 25737944 25737558.273 25735630 25738388 + gene protein_coding_gene TRUE TRUE AT5G64300.1 ATGCH (Arabidopsis thaliana GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. Identical to Riboflavin biosynthesis protein ribAB, chloroplast precursor [Includes: GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] (RIBAB) [Arabidopsis Thaliana] (GB:P47924;GB:Q9SBA8); similar to riboflavin biosynthesis protein, putative [Arabidopsis thaliana] (TAIR:AT2G22450.1); similar to GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase [Solanum lycopersicum] (GB:CAA05308.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] (GB:AAQ03091.1); similar to putative riboflavin biosynthesis protein ribA [Oryza sativa (japonica cultivar-group)] (GB:BAD09287.1); contains InterPro domain GTP cyclohydrolase II; (InterPro:IPR000926); contains InterPro domain 3,4-Dihydroxy-2-butanone 4-phosphate synthase; (InterPro:IPR000422) 0.933867235239548 10.1501041137473 8.77783464229475e-07 4.15736275112661e-05 14.2253606063293 18.1185034683447 0.933867235239548 0.0757643160576977 AT5G53310_at 8.73938038882174 9.00738834854347 9.61005539347971 9.70339684098805 10.2101903820758 9.73330801780644 8.82429336661111 8.87905352551388 8.52490085849286 8.06959023591364 9.52839840470058 9.216112832395 9.0829301183531 9.59902911283421 9.3702960283364 9.55678815074948 8.85965609431506 9.43780686059043 8.22152461597013 0.144052957537426 0.142179655178152 0.142905783269872 0.145965504262187 0.143443107019248 0.156926236154478 0.149784830968443 0.142819839122507 0.181570757554311 0.15107362630011 0.142779979041995 0.142403129548463 0.146624029467100 0.143886473071098 0.141997055632450 0.139018590467254 0.175540802329348 0.145838739779133 0.141356999118272 5 5 + 21651928 21653145 21652283.727 21651807 21653581 + gene protein_coding_gene TRUE TRUE AT5G53310.1 myosin heavy chain-related similar to Os01g0621700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043606.1); similar to myosin heavy chain-related (ISS) [Ostreococcus tauri] (GB:CAL52493.1); contains InterPro domain Myosin tail 2; (InterPro:IPR010926) 1.00554035735352 10.1494641780152 8.78318947911989e-07 4.15736275112661e-05 14.2248060941025 18.1400745015183 1.00554035735352 0.0965012697116783 AT5G05760_at 5.01853243499121 4.74276323068369 5.9693850424537 5.56908572816737 6.22202214311339 6.40021755626692 4.12582962539191 3.96279245942074 3.72307748929474 4.14182766399577 4.46457062674290 4.12948325269764 4.193003332826 4.45721589637328 3.9370257805372 4.46853148542515 4.82110468043865 4.24828328114813 3.91250363312344 0.21586366318778 0.216202965752778 0.217081519420973 0.226666936183153 0.229330086179830 0.224771414202456 0.217114488620300 0.221432296203314 0.222632104687382 0.216296222033483 0.215626496527149 0.212894221003475 0.212894221003475 0.218363395167873 0.213441218774503 0.212894221003475 0.219478102553379 0.212894221003475 0.214096640090886 5 5|0 -|/ 1729127 1729868 1729462.6 1728894 1731022 - gene protein_coding_gene TRUE TRUE AT5G05760.1 SYP31 (T-SNARE SED 5); t-SNARE A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis Identical to Syntaxin-31 (AtSYP31) (AtSED5) (SYP31) [Arabidopsis Thaliana] (GB:Q9FFK1;GB:O65099); similar to SYP32 (syntaxin 32), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G24350.1); similar to Os01g0179200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042197.1); similar to hypothetical protein DDBDRAFT_0217989 [Dictyostelium discoideum AX4] (GB:XP_642671.1); similar to similar to syntaxin 5 [Schizosaccharomyces pombe] [Dictyostelium discoideum] (GB:AAS38833.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 0.995898771548712 10.1481946775496 8.79382287080967e-07 4.15785672849198e-05 14.2237059415338 9.38418113797525 0.995898771548712 0.0939326492277578 AT5G11090_at 7.11286483120533 7.72617667310316 8.66684566097797 8.9707147153705 9.18355495522204 8.58601295359658 7.75291842085469 7.7085997378377 7.07326349002473 6.47523225113124 7.78189147944284 7.89694639499573 7.99275447395794 8.10820430265098 7.75529266472207 8.6843668658553 7.84347907200536 7.8507170231763 6.63152129877404 0.206825028790274 0.197365132965244 0.223166709382824 0.219537096570568 0.205815285355630 0.222877425076535 0.204813226791337 0.198355974641254 0.217661364173309 0.205137897237008 0.199528672688611 0.205847511392285 0.204482724474750 0.214990813968738 0.206849964085271 0.197308477624244 0.219222816695024 0.208214997602832 0.224208062595923 5 5 + 3524905 3525407 3525138.273 3524681 3525847 + gene protein_coding_gene TRUE TRUE AT5G11090.1 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G25280.2); similar to unknown [Solanum tuberosum] (GB:ABA40431.1) 1.26958817174952 10.1441584052745 8.82772383602735e-07 4.16685937650094e-05 14.2202070832344 15.5714004341431 1.26958817174952 0.157423482409124 AT5G55630_at 6.73407953620592 7.33978898905094 7.72836927253116 8.2928637832702 8.81906667664027 8.22816834258954 8.38342466011131 8.4614018765613 7.01525425834192 6.62407114905068 9.18017043381963 9.1532629357166 9.10865002751122 9.27184703939424 9.25114562682824 8.848450652296 8.6747049089197 8.87915479419685 6.92826559550309 0.212710490938642 0.205258835978278 0.203684289030217 0.205213249063656 0.192235427278793 0.200612133680053 0.194172549141098 0.192235427278793 0.211277719796374 0.211439283684559 0.192235427278793 0.192235427278793 0.192235427278793 0.196597811269381 0.201790529781418 0.194709713269169 0.215291020083525 0.195904896393420 0.208583987475257 5 5 + 22549437 22550078 22549667.273 22548584 22550344 + gene protein_coding_gene TRUE TRUE AT5G55630.1|AT5G55630.2 KCO1 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 1); calcium-activated potassium channel/ outward rectifier potassium channel Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Identical to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1) (KCO1) [Arabidopsis Thaliana] (GB:Q8LBL1;GB:O04718;GB:Q9FM75); similar to KCO5 (Ca2+ activated outward rectifying K+ channel 5), outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G01840.1); similar to Eucalyptus camaldulensis outward-rectifying potassium channel mRNA, complete cds (GB:AAF97727.1); similar to K+ channel protein [Solanum tuberosum] (GB:CAC34339.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain K+ channel, two pore; (InterPro:IPR003280); contains InterPro domain Ion transport 2, bacterial; (InterPro:IPR013099); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.36375144398942 10.1427855883528 8.83928654954585e-07 4.16685937650094e-05 14.2190166999462 15.9492888771037 1.36375144398942 0.176547928867623 AT5G13300_at 5.7082992593146 6.37157838423962 6.80965922637664 6.76682522393474 7.4930377237557 6.73836320978771 4.74749300393908 4.80489308313484 4.98833797611978 5.06528283622895 6.27409946653029 6.33680756251487 6.03985052552854 6.29493678873941 6.39168868899923 6.33262732766064 5.88458546809847 6.58088408329488 5.26396698483025 0.262572638924585 0.257581242233150 0.263152673393257 0.277591945824966 0.274652447905096 0.265555061624204 0.267663447078081 0.259294774440111 0.28681159728303 0.258409014712156 0.260064729487378 0.256111183488684 0.261070226541863 0.266531679761906 0.261361890230521 0.260598211225642 0.283341517765435 0.271859068446904 0.267252536142283 5 5|0 -|/ 4255949 4256580 4256332.1 4255604 4262317 - gene protein_coding_gene TRUE TRUE AT5G13300.1 SFC (SCARFACE, VASCULAR NETWORK DEFECTIVE 3) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. similar to ARF GTPase-activating domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G60860.1); similar to AGD4 (ARF-GAP DOMAIN 4), protein binding [Arabidopsis thaliana] (TAIR:AT1G10870.1); similar to AGD1 (ARF-GAP DOMAIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G61980.1); similar to Os09g0510700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063635.1); similar to putative ARF GTPase-activating domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01238.1); similar to Os08g0537600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062366.1); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain BAR; (InterPro:IPR004148); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 1.3524889015839 10.1424998845970 8.84169498993878e-07 4.16685937650094e-05 14.2187689409187 11.8664174333006 1.3524889015839 0.174313586222162 AT5G24150_at 9.70956980725853 10.0607360391447 12.5625733195285 12.6226385897934 11.7254362554780 11.7135762458265 12.3948257178610 12.4620464704804 10.8758331348351 11.8312003283849 12.1676723759963 11.2841564884345 12.5178389051867 12.3099885244260 11.4861971956079 12.5244451714018 12.6351666986251 12.3859126021113 11.4140621208042 0.0871559432582864 0.0797237051508841 0.0814416139350223 0.079530951824445 0.0834795134242098 0.0909811185932187 0.0789935944698715 0.082165629061636 0.0892943269442734 0.0809265890868764 0.0808844262274089 0.0799864400091514 0.0810998516899538 0.0822067694321664 0.0831312416471995 0.0789935944698715 0.0976793917682527 0.0848948757202091 0.0789935944698715 5 5 - 8172623 8173368 8172931.818 8172319 8175434 - gene protein_coding_gene TRUE TRUE AT5G24150.1|AT5G24150.2 SQP1 (Squalene monooxygenase 1) squalene monooxygenase gene homolog Identical to Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene epoxidase 1,1) (SE 1,1) (SQP1,1) [Arabidopsis Thaliana] (GB:O65404); similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:AT5G24160.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042)|Identical to Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene epoxidase 1,1) (SE 1,1) (SQP1,1) [Arabidopsis Thaliana] (GB:O65404); similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:AT5G24160.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.894742655593025 10.140886975544 8.85530494648693e-07 4.16688647881128e-05 14.2173700995883 23.4252356922873 0.894742655593025 0.0627749319242726 AT5G59950_at 9.35205817687343 9.45060867826618 9.92242457631292 9.98536178885362 10.2368497109816 10.1531215104637 8.87087922009567 9.1298835879989 8.54937438661891 8.79002596536902 9.77773475466899 9.67452314839188 9.70005231686798 9.55031203909506 9.49239189076757 9.44729424768694 8.97399241980823 9.60946328384872 8.67176403534501 0.125653189723669 0.123383474150029 0.127199284503767 0.125676625200751 0.126904115599670 0.133576448625317 0.134081450226416 0.127073373160348 0.146055369354264 0.126243220942977 0.126536078199499 0.123383474150029 0.123383474150029 0.133263037181792 0.123383474150029 0.125046865278854 0.143680465379390 0.129026982895232 0.13042987331877 5 5|0 +|/ 24157847 24158645 24158274.1 24157323 24159084 + gene protein_coding_gene TRUE TRUE AT5G59950.1|AT5G59950.2|AT5G59950.3 RNA and export factor-binding protein, putative similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G02530.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G02530.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.865707182187679 10.1402159682975 8.86097369964958e-07 4.16688647881128e-05 14.2167880768335 18.7369527271072 0.865707182187679 0.0512682928309623 AT5G46760_at 8.07061471750605 8.34892992398557 8.96466083751604 9.21282271342645 9.43748780600738 8.8929343109702 7.81563520619907 7.43110558673343 6.72245042540631 7.30332766712238 8.29434423549936 8.23406293406612 8.28727610254712 8.51423026199393 7.50635804471274 8.39605701336414 8.52214361542928 7.52141004216189 7.17733679806125 0.191721645009767 0.188274833598838 0.192647728847972 0.189047014707831 0.194638266255149 0.189196811510210 0.193026810446599 0.195235610054551 0.220256121344300 0.198167858361649 0.196269794577282 0.193157871017216 0.185059622670367 0.190240619652486 0.205390289378212 0.188839275078250 0.188047664542153 0.190686109205129 0.191426729592441 5 5 + 18992684 18993184 18992911.545 18991458 18993236 + gene protein_coding_gene TRUE TRUE AT5G46760.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G17880.1); similar to basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] (GB:ABD65632.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.15109268803291 10.1346083586547 8.90850182700614e-07 4.18247245207395e-05 14.2119224423223 16.1353690101689 1.15109268803291 0.132185356485697 AT5G25150_at 6.16994240556457 5.82244872200248 6.8576049122666 6.7815444607773 7.99763435628327 7.39424727128264 6.06795952982169 5.71030587918164 5.93322772328808 5.22419679146501 6.50876608502128 7.03329897658708 6.62996919156262 7.04993755272974 6.15636924402927 7.05357974916785 6.70060325210605 6.59357090089295 5.92346541198536 0.24119480532673 0.258624246986190 0.234810600674190 0.246890320558244 0.248628521924027 0.239341568519197 0.23705721277535 0.232627905487647 0.262529779865628 0.247313274247718 0.237910195608426 0.235785248548802 0.232182879450551 0.245309080411481 0.236599769371411 0.232182879450551 0.246020519246012 0.244942494281927 0.232399728751057 5 5 + 8680847 8681679 8681197 8677094 8682208 + gene protein_coding_gene TRUE TRUE AT5G25150.1 nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to hypothetical protein MtrDRAFT_AC133571g9v1 [Medicago truncatula] (GB:ABE79248.1); similar to Os06g0649500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058217.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain WD40 associated region in TFIID subunit; (InterPro:IPR007582) 1.16861275472124 10.1340310359722 8.9134107037062e-07 4.18247245207395e-05 14.2114213392590 12.8049068644433 1.16861275472124 0.136101652290833 AT5G07690_at 7.80016652300944 7.6282903639147 8.39679064377944 8.28960954274116 9.3031961819578 8.8567424697266 9.01697315993907 9.06641536356684 6.94109992215824 9.44359667076317 10.2138265038177 10.1996525213241 10.0068418258212 10.1174967480959 9.83940348075778 9.64179780350461 10.1426295945745 10.4770419522593 9.07523429790609 0.186486962032934 0.172990049215632 0.175726438029241 0.174898603979849 0.166363412343806 0.175702577331287 0.174161331431300 0.168010905488054 0.213697469104584 0.169165646473096 0.175384690276013 0.168815215933139 0.166113139088708 0.170329890136675 0.178779485977538 0.167378689985944 0.170649353127826 0.176772678318132 0.172593946557766 5 5 + 2447744 2448220 2447975 2446765 2448544 + gene protein_coding_gene TRUE TRUE AT5G07690.1 MYB29 (myb domain protein 29); DNA binding / transcription factor Encodes a putative transcription factor (MYB29). similar to MYB76 (myb domain protein 76), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07700.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.96340801521865 10.1305841916461 8.94277981371694e-07 4.19171693727356e-05 14.2084288983237 17.828012998102 0.96340801521865 0.0852712963413736 AT5G48460_at 5.35525660295037 5.79877485141638 5.70500164239128 6.08424562162744 7.19148370535978 6.80508558334983 6.16626952898993 6.54907588649552 7.17253810346824 6.71026124171297 9.6655904948622 9.33874806421647 8.88554096793423 9.4129716905874 8.99794702168736 8.99671198630782 7.88613018217965 9.0474281319278 7.58589726600883 0.217628010704552 0.215142845604395 0.220345552479954 0.213264118616901 0.219948949466813 0.21400160005196 0.213472105367107 0.214340304594153 0.231179780632635 0.218839887674076 0.218059443567516 0.223994349640972 0.218760048664096 0.217282008754255 0.217910064657461 0.214708915199659 0.224236919419503 0.216347941708927 0.223458528470491 5 5 - 19653459 19654329 19653746.636 19653327 19656714 - gene protein_coding_gene TRUE TRUE AT5G48460.1 fimbrin-like protein, putative similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G35700.1); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G55400.1); similar to Os01g0514600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043189.1); similar to Os02g0719100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047943.1); similar to fimbrin/plastin-like [Triticum aestivum] (GB:AAC49813.1); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 1.17588064222594 10.1204473405242 9.02976219243738e-07 4.22343864525855e-05 14.1996218712338 14.299457063419 1.17588064222594 0.138051493056699 AT5G66050_at 5.18537228169986 5.67434023462841 6.10338961474098 6.18916117202143 6.30102250792428 6.20606546585672 4.26110515022997 5.06894345806794 4.82663293005185 4.37352696405293 6.41378626783766 6.49253400803736 5.62713746195319 6.50687947832552 6.21153303965328 6.06895523563974 5.29018666088904 5.88895424283226 4.62690639948508 0.194160848201973 0.197610823676468 0.198828128151569 0.194415065859220 0.193203477620618 0.206357004342119 0.205275613120004 0.207593123934526 0.199144115944719 0.19556917246833 0.200498166161088 0.192150029382773 0.194934238289171 0.205111111436207 0.196440978771758 0.192736940584066 0.193645327125106 0.196258204782227 0.199972006920489 5 5|0 -|/ 26429870 26430928 26430482.333 26429314 26431762 - gene protein_coding_gene TRUE TRUE AT5G66050.1|AT5G66050.2 similar to wound-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G19660.2); similar to Os08g0357000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061624.1); similar to putative wound inductive gene [Oryza sativa (japonica cultivar-group)] (GB:BAD03758.1); contains InterPro domain Protein of unknown function DUF151; (InterPro:IPR003729) 1.30297155525601 10.1204269287038 9.02993826630914e-07 4.22343864525855e-05 14.1996041273359 10.9594339342758 1.30297155525601 0.164908109596449 AT5G54980_at 5.54988416728469 6.15242340570608 6.61259118749162 7.02734942823819 7.81705232625445 7.45757730172752 6.05712695424318 6.41211222744706 5.94981662045203 5.6258622551983 7.51703106072787 7.13699177131536 7.90526162465506 7.44870799807556 6.43681003264203 7.69635004842292 6.9349363189548 6.72023147076174 6.16091652569514 0.258691973463108 0.251586076917184 0.255195585535607 0.246265454455428 0.246265454455428 0.27714478522148 0.258561678792032 0.246958891417531 0.260053824434621 0.251475805923992 0.246265454455428 0.246265454455428 0.248203717490947 0.268023383732654 0.254482562283217 0.249918255628907 0.259773578447883 0.262653881841858 0.254441765929109 5 5 + 22333087 22333747 22333414.636 22332925 22333827 + gene protein_coding_gene TRUE TRUE AT5G54980.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G17200.1); similar to Os02g0219900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046315.1); similar to hypothetical protein [Gossypium hirsutum] (GB:CAC84114.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 1.24904872291848 10.1169602981346 9.05989582257077e-07 4.23288402929323e-05 14.1965900276237 13.2041338787039 1.24904872291848 0.153844989710636 AT5G40190_at 7.42750298945765 7.98907638549387 8.16700058634103 8.52180575855563 8.8253353478713 8.56446373898512 6.97068187781013 7.36013919311845 7.2132428581736 6.95286600284807 8.6847393192186 8.48787644543086 8.6341346393357 8.49376725583399 8.44451163203613 8.66986465419022 7.86789182484822 8.17181565509946 7.25436787757041 0.226741771123949 0.216543067946591 0.221688000296572 0.217137010691057 0.214032396722758 0.239354008502954 0.224544899451154 0.215446635457296 0.236149861409367 0.23840746393974 0.211331214859061 0.216138448788228 0.221462039664001 0.221309017424445 0.224705900888779 0.219448935587425 0.223193815478557 0.22004835749711 0.235057101605997 5 5 - 16086539 16086950 16086732.636 16086407 16087176 - gene protein_coding_gene TRUE TRUE AT5G40190.1 calmodulin-binding protein Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT3G28140.1); similar to calmodulin-binding protein [Clostridium thermocellum ATCC 27405] (GB:ZP_00504052.1); similar to Os09g0375400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063037.1); contains InterPro domain Appr>p cyclic nucleotide phosphodiesterase; (InterPro:IPR009097) 1.18723375592668 10.1143441255336 9.08257542369984e-07 4.23891239749333e-05 14.1943146115501 15.7642427802607 1.18723375592668 0.140694866353159 AT5G09630_at 3.8904982630704 4.40050435695621 4.60783695557294 5.18780146854421 5.56849135376324 5.50985742275744 3.32313592875034 3.60191913913083 3.15843682584201 3.17347387856124 4.27690277805151 3.84429759511850 4.36382490639361 4.15938597744158 3.91323784633492 4.15565802676446 4.61863232412443 4.39643509485001 3.39267318499326 0.219777582695773 0.21677600032151 0.222374992893475 0.21928213078691 0.219717985038475 0.220844535154520 0.220695733963451 0.215943468340823 0.217269668446023 0.216754496482506 0.216599977941991 0.217865223144003 0.221707149412146 0.218683971394048 0.224847192937202 0.218289874672544 0.215943468340823 0.219048123276785 0.21603434472472 5 5 - 2986053 2986508 2986250.273 2985871 2987653 - gene protein_coding_gene TRUE TRUE AT5G09630.1 similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G22690.2); similar to Zinc finger, RING-type; CTLH, C-terminal to LisH motif [Medicago truncatula] (GB:ABE86823.1); similar to Os06g0588900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057959.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain CT11-RanBPM; (InterPro:IPR013144); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 1.19450061684261 10.1073852709494 9.14320232218185e-07 4.25816039657282e-05 14.1882589793776 8.24004300195172 1.19450061684261 0.142454902276873 AT5G11500_at 10.9762737443665 11.0408699864151 11.7584007016077 11.7822232516407 11.7641575844685 11.6117598730062 10.7475184990874 10.6829922264664 10.6622806409712 10.3622299458707 11.3495075571259 11.1804977457043 11.2902073049949 11.1868919737425 11.1640524783994 11.3000220773730 11.2383563411130 11.1325595934077 10.3193179626833 0.0823538355730354 0.0803523519558682 0.0813612278016774 0.0824657204638022 0.0834279878096624 0.0845187463991643 0.0832416360693754 0.0821934842795432 0.094207972416941 0.0817849544987776 0.0823930211869782 0.0801780478842686 0.0808414531432358 0.0827255908606668 0.0819535089024536 0.0817681219938297 0.0873660102178207 0.0837021923403982 0.0816495351098927 5 5|0 +|/ 3676830 3678231 3677929.571 3676580 3679353 + gene protein_coding_gene TRUE TRUE AT5G11500.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07560.1); contains InterPro domain Protein of unknown function DUF814; (InterPro:IPR008532) 0.824770386368891 10.1073360852310 9.1436323983268e-07 4.25816039657282e-05 14.1882161613062 22.1346268502945 0.824770386368891 0.0310192414656123 AT5G16570_at 8.6530517453919 8.9534081448991 9.6253200873799 9.5124805362372 9.35008865189117 8.83299150123296 7.37938543685618 7.60782902421226 8.06284431983041 6.90073109411568 8.60138200289735 7.51830076379141 8.6553087302966 8.33454125878957 7.68122498972453 9.64573896232567 8.9812135568665 7.8253096004545 7.41557345360255 0.182458319420246 0.184553357895518 0.189930567462301 0.185543357525165 0.186751214803116 0.192181718882673 0.188344646964653 0.193530454898002 0.198036844425399 0.196484490944535 0.187573414484569 0.185620522126563 0.187554834321690 0.198327342603533 0.188653502422682 0.181964251150333 0.181964251150333 0.189128570322930 0.194720794646540 5 5|0 -|/ 5421929 5422902 5422268.444 5421746 5424569 - gene protein_coding_gene TRUE TRUE AT5G16570.1 GLN1;4 (Glutamine synthetase 1;4); glutamate-ammonia ligase Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium Identical to Glutamine synthetase cytosolic isozyme 1-4 (EC 6.3.1.2) (GLN1;4) (Glutamate--ammonia ligase GLN1;4) (GLN1-4) [Arabidopsis Thaliana] (GB:Q9FMD9); similar to ATGSKB6 (Arabidopsis thaliana glutamine synthase clone KB6), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT3G17820.1); similar to ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G37600.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to cytosolic glutamine synthetase [Brassica napus] (GB:CAA73063.1); similar to Glutamine synthetase cytosolic isozyme (Glutamate--ammonia ligase) (GB:P04078); similar to glutamine synthetase [Hevea brasiliensis] (GB:AAB61597.1); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) 1.06373140015292 10.1062333023518 9.15328081602808e-07 4.25816039657282e-05 14.1872560856738 16.6718662771757 1.06373140015292 0.112488548824317 AT5G40200_at 6.75524638782627 6.78312871358775 7.23349592964763 7.25680075516081 7.69181302478308 7.46176051211523 7.1483274319689 6.44537589456244 4.93130795541252 5.16433359451644 6.62574607105016 6.86957584960073 6.74223543877808 6.67247177964526 6.91638232123201 6.88488254495897 7.04458419618935 6.44851008464986 5.33522455394234 0.235593777969716 0.223935309045354 0.224343945889758 0.229659192279429 0.233439723763834 0.231257196920472 0.222679096336321 0.228996139737837 0.257121978795636 0.229968898083336 0.227187093826520 0.223807078093192 0.227802651291542 0.229753927376850 0.235660627670252 0.228066222837612 0.235236988342735 0.230736564331457 0.238673114262240 5 5 + 16089416 16090284 16089732.636 16087558 16090542 + gene protein_coding_gene TRUE TRUE AT5G40200.1 DEGP9 (DEGP PROTEASE 9); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 9 (EC 3.4.21.-) (DEGP9) [Arabidopsis Thaliana] (GB:Q9FL12); similar to DEGP2 (DEGP PROTEASE 2), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT2G47940.1); similar to Os06g0234100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057235.1); similar to Serine protease (ISS) [Ostreococcus tauri] (GB:CAL53952.1); similar to Os02g0742500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048089.1); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) 1.12993722478982 10.1050213721773 9.16389693051614e-07 4.25852983782595e-05 14.1862008535947 13.0565788663999 1.12993722478982 0.128152273086645 AT5G66100_at 4.1456573853826 4.11056320589695 4.87445032108748 4.81485498875589 4.90239835871588 5.3148094921141 4.13830396948539 3.65737845878642 4.05490292613998 3.82923101158697 5.00902857009233 5.41126060053321 5.09889211595881 4.71849740330729 5.22328533291357 4.94796826410288 4.86814520016014 5.2123420213984 3.86626621772004 0.235894214402918 0.237199678448136 0.23110963081184 0.241705208781534 0.233666806349141 0.241797613187007 0.239243231803291 0.234828510961642 0.246230285204969 0.243474716412658 0.231486049497249 0.234116852620381 0.243564302494242 0.240958332691799 0.234770066607673 0.231325233070409 0.242277659346626 0.231290937057583 0.242751654774394 5 5|0 +|/ 26445815 26446929 26446152.889 26444715 26447232 + gene protein_coding_gene TRUE TRUE AT5G66100.1 La domain-containing protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G35890.1); similar to RNA-binding protein Lupus La [Medicago truncatula] (GB:ABE93453.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630) 1.05401496101158 10.0987321824453 9.21920329792555e-07 4.2796441395149e-05 14.1807225866454 8.98379076771509 1.05401496101158 0.110288308146497 AT5G19690_at 8.78266752485426 8.78154275795403 9.5162384261183 9.28326333043693 9.07251512875845 8.77182038069997 7.7789984100751 7.95358063378918 7.05795806651262 7.19062765836425 8.03416072613827 8.57411667596831 8.27728079437324 7.87413846716633 8.2645852488699 8.02167122405303 8.0245007302951 8.03558835031415 7.16527407140577 0.158445337242353 0.158938788427394 0.159461967811212 0.169407797492115 0.157591863310741 0.157726628112260 0.159360297353114 0.156518034136453 0.181144320955986 0.164767589586143 0.158846338759603 0.154893891797099 0.156937529943335 0.168774209042558 0.158738154692650 0.151478809628522 0.160205891132048 0.161242149287510 0.161262166425246 5 5|0 +|/ 6657117 6657934 6657514.222 6652518 6658411 + gene protein_coding_gene TRUE TRUE AT5G19690.1 STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions similar to STT3B (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B), oligosaccharyl transferase [Arabidopsis thaliana] (TAIR:AT1G34130.1); similar to oligosaccharyl transferase [Aedes aegypti] (GB:EAT44394.1); similar to Oligosaccharyl transferase, STT3 subunit [Medicago truncatula] (GB:ABE78557.1); similar to hypothetical protein CC1G_09885 [Coprinopsis cinerea okayama7#130] (GB:EAU90645.1); contains InterPro domain Oligosaccharyl transferase, STT3 subunit; (InterPro:IPR003674) 0.918531998277512 10.0954331440156 9.24835945461615e-07 4.28858707699451e-05 14.1778474165950 16.3806825953732 0.918531998277512 0.0724301363012857 AT5G53340_at 5.91413351205332 5.96086418854305 7.41225053660567 7.00088976213948 7.35590476044418 7.18586654414112 6.96515212522269 6.63308937864939 6.09274035300454 6.30612810454972 7.55350280562222 7.58436403940058 7.51209807810134 7.06657756844978 7.48535651208133 7.28546664523273 6.87870930868397 7.15465714140844 6.16706810760735 0.196398007030221 0.173190832763159 0.177518310575395 0.178180536676929 0.175529279214743 0.180679140701192 0.175453992051238 0.181159865729985 0.202047035339567 0.185203758995945 0.179711509589853 0.175770296655784 0.178830276234891 0.184002607802603 0.173735872767919 0.175433597700761 0.191955248298047 0.173217293095889 0.182563235954065 5 5|0 -|/ 21658407 21659209 21658776.125 21658039 21660788 - gene protein_coding_gene TRUE TRUE AT5G53340.1|AT5G53340.2 galactosyltransferase family protein|transferase, transferring hexosyl groups similar to transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT2G25300.1); similar to beta 1,3-glycosyltransferase-like protein I [Solanum lycopersicum] (GB:CAD30015.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) 0.998432045183754 10.0799036089001 9.38695723980914e-07 4.34820622232419e-05 14.1642992090530 13.5553873680214 0.998432045183754 0.096442869718986 AT5G60950_at 7.6213570654155 8.06911497147516 7.787168839921 7.81155768650571 6.66005695195364 6.5922986963033 2.80015654437008 2.69310809581735 6.16438642626187 4.76330273370858 5.12307865365722 6.36801022394694 4.0879265326623 5.43981423768303 4.97680464903744 4.04911421476615 3.74624106686306 4.86439329776304 3.66199714770482 0.270270707282954 0.270779580658320 0.265080243059184 0.280170133478252 0.270705198609466 0.277920766264717 0.284894921741133 0.272189761135878 0.276038438830331 0.268296147512937 0.268109203228100 0.267002926563087 0.26440098064042 0.26440098064042 0.265976169835587 0.268401935646213 0.280324409426598 0.271606677446137 0.272502022923863 5 5|0 -|/ 24544398 24545192 24544726.143 24544331 24545310 - gene protein_coding_gene TRUE TRUE AT5G60950.1 phytochelatin synthetase-related Identical to COBRA-like protein 5 precursor (COBL5) [Arabidopsis Thaliana] (GB:Q9FME5;GB:Q6IDL3); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13304.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) 0.94276523236185 10.0766975362958 9.4158506372713e-07 4.35693531457481e-05 14.1614993141301 11.1019281708565 0.94276523236185 0.0806391115390225 AT5G13050_at 5.36448250057446 5.32904443605069 6.44677328185748 6.30471871023744 7.17726518365663 6.54621921384304 5.62926727887594 5.59776333819263 5.31516478385748 5.42977491823395 5.95907962413815 6.16901104732194 6.71746899729362 6.22598169082661 6.12372085217009 6.40877435337787 6.34960001964638 6.72335789488924 5.33040028629848 0.207507069940949 0.203775802067681 0.219114110640276 0.220080431316392 0.204014097953538 0.220479460973805 0.206183637491949 0.212395489273792 0.214190307202354 0.221977309725178 0.204739212745686 0.207027491372432 0.211991851043026 0.209563362862957 0.216294109369720 0.203775802067681 0.211428373693788 0.203807846386473 0.207595370444066 5 5|0 -|/ 4137025 4138345 4137724 4136559 4138795 - gene protein_coding_gene TRUE TRUE AT5G13050.1|AT5G13050.2 5-FCL; 5-formyltetrahydrofolate cyclo-ligase 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate similar to 5-formyltetrahydrofolate cycloligase [Lycopersicon esculentum] (GB:AAM90961.1); contains InterPro domain 5-formyltetrahydrofolate cyclo-ligase; (InterPro:IPR002698) 1.05739117806828 10.0556391041171 9.6080475677229e-07 4.44112961716488e-05 14.1430843419825 11.8959772292884 1.05739117806828 0.112238573893761 AT5G16320_at 4.5945048531625 4.79962681602256 5.92164573138458 6.07645676415473 5.80924957305461 6.52891191116132 4.34335084643076 4.51900556331096 3.96607806560468 4.27870037310206 4.98152958326097 4.75264094183015 5.16484953519026 4.9573331742143 4.80600733826852 5.23623703002553 5.37774279866182 5.31346075880629 4.59139966798046 0.231456708575960 0.227378118496621 0.233141637811585 0.225993392938035 0.228255990147325 0.239024259022122 0.227791930280473 0.229977732250200 0.249479094953444 0.226367783887468 0.222685013927291 0.226959047024670 0.232562361467632 0.225216161926994 0.227808439931500 0.222685013927291 0.224946634040135 0.248936550401146 0.229598760211478 5 5 + 5345362 5345869 5345673.182 5344505 5346022 + gene protein_coding_gene TRUE TRUE AT5G16320.1 FRL1 (FRIGIDA LIKE 1) family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004884 similar to FRL2 (FRIGIDA LIKE 2) [Arabidopsis thaliana] (TAIR:AT1G31814.1); similar to ABI3-interacting protein 2 [Medicago truncatula] (GB:ABE81461.1); contains InterPro domain Frigida-like; (InterPro:IPR012474) 1.15747154233847 10.0533457954540 9.62923402503676e-07 4.44618257056964e-05 14.1410763478734 10.0003195976326 1.15747154233847 0.135691844737112 AT5G05100_at 8.85207388116575 8.74700693818762 9.78102942837712 9.78603316403346 10.0419009949086 9.77560931764464 8.20100868779593 8.33737000419879 8.88620764381156 8.4483440123311 9.11002771289126 8.9426640765045 9.03226488508693 8.97104142909434 9.03530818142344 9.25575572683033 9.13407652665222 9.13011135883775 8.6311344013029 0.127959014521725 0.125928288873172 0.125993420959458 0.129876629509749 0.126863394508419 0.131319537814198 0.127771267545675 0.129741067668894 0.126058267864813 0.132760101955644 0.130299893857997 0.125784586934461 0.129051282766493 0.126479986993284 0.122523424235012 0.127864774008473 0.127696164245177 0.125731497510931 0.136549799193406 5 5|0 -|/ 1505639 1506116 1505804.889 1505123 1507224 - gene protein_coding_gene TRUE TRUE AT5G05100.1 nucleic acid binding similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G10770.2); similar to Os05g0411600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055538.1); similar to DIP1 [Zea mays] (GB:AAZ73119.1); contains InterPro domain Single-stranded nucleic acid binding R3H; (InterPro:IPR001374) 0.866477949876928 10.0498072570866 9.6620239531095e-07 4.45657683581249e-05 14.1379770560941 18.0560715135291 0.866477949876928 0.0548803695998442 AT5G42150_at 6.27726829194808 6.94399749825323 8.04788876416647 8.22061458476531 6.99258369427825 7.07147981303134 6.23000557925344 6.64106908979251 3.5986526709388 5.16826557657553 5.14641171340784 6.09206299027216 5.70249738660508 5.17419795357502 5.39913493449367 6.25573715905414 6.53831494069988 5.51854268041633 4.55650596752302 0.232065913526381 0.230002749297666 0.2287471035628 0.226912644819617 0.223432720255740 0.228502019809413 0.223619142116567 0.223432720255740 0.250158070258873 0.226007906367916 0.229040011430605 0.233056772105257 0.226709285373867 0.237009608626756 0.229219848290061 0.223432720255740 0.24153966321605 0.231495045063847 0.231659278907552 5 5|0 +|/ 16864100 16865101 16864652.9 16863378 16865507 + gene protein_coding_gene TRUE TRUE AT5G42150.1 electron carrier/ protein disulfide oxidoreductase similar to H0211F06-OSIGBa0153M17.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67930.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.17363883202580 10.0457805159387 9.699485344145e-07 4.46760723230732e-05 14.1344487023490 12.1378653518501 1.17363883202580 0.139473883879927 AT5G03520_at 9.74913921449105 9.87196176371445 10.7182413840600 10.7137952202109 10.9993598198736 10.7776364911483 10.1834878934369 10.2327933923708 10.0986598111271 9.889738777158 11.2722751030169 10.7974090665775 10.8045732739861 10.9058083066831 10.9356213848424 10.6425312167126 10.6626355367607 10.9707895065141 9.9516241221934 0.096658609199372 0.096028710075991 0.0943383142939357 0.0950687007500286 0.0948019055057758 0.0971505475004645 0.0939496640535285 0.0954923858748408 0.112264834599552 0.0966126634934642 0.09343219348778 0.0919450574125195 0.0938971363572 0.0920156792473527 0.0981529142882635 0.094437046192312 0.101506732770922 0.0933954020732574 0.101549178611624 5 0|5 /|+ 884005 885133 884643.286 883446 885422 + gene protein_coding_gene TRUE TRUE AT5G03520.1|AT5G03520.2 AtRABE1d/AtRab8C; GTP binding similar to AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09900.1); similar to small GTP-binding protein [Pisum sativum] (GB:CAA90082.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753)|similar to AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09900.1); similar to ethylene-responsive small GTP-binding protein [Lycopersicon esculentum] (GB:AAD46405.1); contains InterPro domain GTP-binding nuclear protein Ran; (InterPro:IPR002041); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras small GTPase, Ras type; (InterPro:IPR003577); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.84343025852354 10.0450233853281 9.70654664130321e-07 4.46760723230732e-05 14.1337851075944 20.8327833946863 0.84343025852354 0.0446928247851435 AT5G61520_at 7.3920499794534 8.24096923364881 8.67728528999498 8.95436827492139 9.24829280509693 8.91402088094337 5.70313845710181 6.09052595611761 6.30535618425974 5.90775028235865 6.36815410431557 6.65359387254615 7.2751278737522 6.5628427763383 4.59081724381959 6.65025527746146 7.089416249496 6.25582311856201 5.2054760059334 0.263210444690316 0.252743941850708 0.261201554441455 0.252191657616499 0.259154859287438 0.258622361141777 0.248772348130243 0.248623914011345 0.260389212348308 0.244566508600482 0.253095660104037 0.248153252538071 0.247782434014671 0.252694144012513 0.267822131125673 0.246257261496915 0.259578867866366 0.244634560585157 0.251478217580294 5 5 - 24756584 24757140 24756928.091 24756252 24758499 - gene protein_coding_gene TRUE TRUE AT5G61520.1 hexose transporter, putative Identical to Sugar transport protein 3 (Hexose transporter 3) (STP3) [Arabidopsis Thaliana] (GB:Q8L7R8;GB:Q9ZS56); similar to glucose transporter, putative [Arabidopsis thaliana] (TAIR:AT4G21480.1); similar to STP1 (SUGAR TRANSPORTER 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G11260.1); similar to Hexose carrier protein HEX6 (GB:Q07423); similar to putative hexose transporter [Vitis vinifera] (GB:AAT09978.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 1.35819028158895 10.0435170589127 9.72061183411815e-07 4.46933646385316e-05 14.1324647090164 14.0210553456866 1.35819028158895 0.178107274374110 AT5G05980_at 7.13345239917354 7.08738149863709 8.18094336693886 7.97491608243173 8.38883225857057 8.1516665286002 7.17036967254893 7.02292303793848 6.96217651973138 7.18534656117226 8.02183337087665 8.10323804128648 7.83244386039814 7.59048495626 7.8158772466544 8.15528090380872 7.6274357136133 7.74483356657186 7.37071474738293 0.180732046866445 0.180093319667161 0.180706710332209 0.178999467529918 0.189425175228428 0.197648481885151 0.180100991428331 0.188732814144495 0.1820831727194 0.180723461922375 0.183250885521262 0.180157431050397 0.18205866649192 0.187940480552459 0.183053388223423 0.174497178833574 0.194631171521878 0.175536148045523 0.181743285346786 5 5 - 1799681 1800713 1800075 1799491 1804493 - gene protein_coding_gene TRUE TRUE AT5G05980.1|AT5G05980.2 ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B); tetrahydrofolylpolyglutamate synthase similar to ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT3G55630.3); similar to putative folylpolyglutamate synthetase [Oryza sativa (japonica cultivar-group)] (GB:AAG13624.1); similar to Os03g0111100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048721.1); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645); contains InterPro domain Mur ligase, middle region; (InterPro:IPR013221) 0.879620210866168 10.0355833596834 9.79505813930086e-07 4.4987946106963e-05 14.1255066811312 15.1558978057029 0.879620210866168 0.0605834356816107 AT5G19680_at 7.8495424959917 8.05203955982218 8.73967764046186 8.86018705307303 8.9866952139978 8.70999472028873 7.93347646271609 7.99472430192608 7.5145144137168 7.00419488777348 8.41767050804538 8.26964704586709 8.09285077647027 8.2444804216416 8.09736295922933 8.10972173940429 8.32363377288513 8.22256060558923 7.42030049560548 0.150334023343745 0.137033908496007 0.136037601317461 0.134410781269176 0.139756429924164 0.136588718988830 0.136693382436156 0.139249943495596 0.139980031946997 0.156085638922658 0.137622936364363 0.134410781269176 0.140185359549753 0.139495281003664 0.148145918670207 0.134864392381532 0.135722015209933 0.141195631405513 0.142742360564297 5 5|0 +|/ 6650342 6651507 6650891.1 6649607 6651937 + gene protein_coding_gene TRUE TRUE AT5G19680.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G15410.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE81262.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, SDS22; (InterPro:IPR007092) 0.88796533239215 10.0330626315507 9.81884091889219e-07 4.5049456696113e-05 14.1232946815705 16.1584143032047 0.88796533239215 0.0637823338093402 AT5G62770_at 3.98274957229032 3.97972945834809 5.5924250613773 6.0054232000532 3.52556412658572 3.12419845602595 2.12437184110857 2.36175169434726 2.3940344025096 2.15505709230711 2.78843126478485 2.77583274663818 2.98522748331471 2.90213818169630 3.36794931133144 2.99915821521 2.69756670389070 2.50106182495324 2.20980670131200 0.247671039156669 0.242767904832671 0.256816487012017 0.260928196790107 0.246797404646208 0.248535290189626 0.250033602586116 0.243012390708194 0.259027191760171 0.249125245956458 0.242767904832671 0.242767904832671 0.242767904832671 0.247844347399106 0.242767904832671 0.242767904832671 0.242767904832671 0.248686437887077 0.250963462624126 5 5 + 25228004 25228567 25228213 25227721 25228833 + gene protein_coding_gene TRUE TRUE AT5G62770.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23710.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70420.1); similar to Protein of unknown function DUF1645 [Medicago truncatula] (GB:ABE93113.1); contains InterPro domain Protein of unknown function DUF1645; (InterPro:IPR012442) 1.03697836029409 10.0304791952384 9.843280402606e-07 4.51138470563621e-05 14.1210270203261 6.40209506719388 1.03697836029409 0.107797940664917 AT5G37370_at 8.28664518201384 7.80204869522971 9.43138467841805 9.28414179803746 9.52097623561732 9.19066493910051 7.84074494261284 7.7900310092411 8.33193271792888 8.17478010426348 8.85289462834499 8.9033712355173 9.15010447852747 8.91979581539889 8.40942628163121 9.35034285169379 9.11750694271531 9.05144313863758 8.52689829742205 0.158418235131198 0.169913412469304 0.167373169133244 0.161113675700878 0.163169306665399 0.157557506361799 0.177551544904905 0.162401666759104 0.179410592120255 0.167610145611809 0.154733887735006 0.156385852715827 0.154733887735006 0.155567188562106 0.164824695994992 0.154733887735006 0.162083425438796 0.168410825812578 0.166891367629655 5 5 - 14830081 14830643 14830434.727 14829915 14833750 - gene protein_coding_gene TRUE TRUE AT5G37370.1|AT5G37370.2 ATSRL1; binding encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt. similar to pre-mRNA splicing factor PRP38 family protein [Arabidopsis thaliana] (TAIR:AT2G40650.1); similar to PREDICTED: similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B isoform 1 [Bos taurus] (GB:XP_587705.2); similar to Os05g0178900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054801.1); contains InterPro domain PRP38; (InterPro:IPR005037) 1.02587404360291 10.0289518338595 9.85776040085092e-07 4.51325031900361e-05 14.1196860474536 17.3002785407487 1.02587404360291 0.105007493276966 AT5G65520_at 3.36919223752400 3.90286588563419 3.82425959131656 3.87223552998565 4.76158426580186 4.71882522416395 3.29916657417656 3.39320929241469 2.65403338648619 2.52882251647643 4.36080004851607 4.16612819268382 4.12160833836630 3.83943144935474 3.97366554586139 4.02458822373857 4.02155063680999 2.93182260305047 3.10174616598501 0.221793477673791 0.223789573979547 0.223883570425027 0.223638890625619 0.224437124700965 0.230857907058354 0.224513431739257 0.22105641475799 0.231547186843438 0.220261444625744 0.225144568057598 0.219547883891856 0.219547883891856 0.219753417972448 0.226912834829299 0.219547883891856 0.223311091311202 0.226204872760613 0.22586453812484 5 5 - 26207107 26207628 26207396.091 26206951 26207817 - gene protein_coding_gene TRUE TRUE AT5G65520.1 binding similar to Os02g0204000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046241.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.985766506097386 10.0263487831854 9.88249167868187e-07 4.51980046369165e-05 14.1174001378445 7.23840902651729 0.985766506097386 0.0944348410108389 AT5G02760_at 9.09885312762974 9.3192984651939 7.95567313568874 8.3542922383446 9.63845002528572 9.51669752023643 6.20310064649124 6.86626201707693 10.9879111646791 9.4256371248816 11.9981853915262 12.2438025884699 12.0790680135195 11.4099106885069 12.4148544465586 12.0505571770740 11.1364187281706 11.5818705631088 11.1033932118095 0.134732525422258 0.125865781640845 0.149440710814239 0.138799317183901 0.128418758374099 0.125865781640845 0.178843476173962 0.147361140289281 0.129168054200626 0.140765510006408 0.127581973786062 0.126183336082588 0.125865781640845 0.135450489001046 0.129575832624014 0.129406946173673 0.131555567173640 0.128473409505344 0.129087858947425 5 5|0 +|/ 626022 626751 626384.8 625252 627122 + gene protein_coding_gene TRUE TRUE AT5G02760.1 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT3G12620.2); similar to protein phosphatase 2C homolog [Mesembryanthemum crystallinum] (GB:AAD11430.1); similar to Os06g0717800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058597.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.17654297414216 10.0186674236173 9.95586483709783e-07 4.54855993716016e-05 14.1106508309699 19.5540687053635 1.17654297414216 0.140813763452835 AT5G65380_at 7.60545678378667 7.5669005255599 9.10564346629822 8.86060443859143 8.91219686202727 8.65755064368695 7.98051669751544 7.98837931470422 8.04882477883135 7.86394036192056 8.77966968677186 8.29018248971811 9.48350276722593 8.8361090431206 7.96322693136823 9.06614672733059 9.1768036173774 8.38451047063594 8.34284953346871 0.137276150831409 0.134647662618819 0.139310602401816 0.133702474150521 0.136089342799551 0.134569997974700 0.127639219759914 0.130067847047695 0.141566311913259 0.136280198100479 0.138182140762908 0.13191203604722 0.134373266730317 0.130681003104328 0.138476812123875 0.134668145033766 0.141270410738277 0.135624943070328 0.131100544234470 5 5|0 -|/ 26140651 26142307 26141205 26140215 26143665 - gene protein_coding_gene TRUE TRUE AT5G65380.1 ripening-responsive protein, putative similar to antiporter [Arabidopsis thaliana] (TAIR:AT5G10420.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G44050.1); similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] (GB:AAG49032.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 0.880499798773059 10.0170261774460 9.9716187438963e-07 4.55096192831612e-05 14.1092079962865 16.7510180205715 0.880499798773059 0.0615347995048301 AT5G16040_at 4.946426515536 4.58044420465002 5.81156454092187 5.43956086453495 5.35639956763858 5.7908867862316 4.58367735298801 4.561578578063 3.50453041065557 4.31902670858573 4.76998114450009 4.99334963640699 4.95211049645746 4.90657239425163 5.29000483188391 4.80969825923296 5.73837728657711 4.91875319856144 3.66578617913202 0.183116840253741 0.182721267619029 0.179103915529276 0.186720062911810 0.184800488749602 0.180277364275719 0.184421271486485 0.180065230001065 0.190215762764737 0.178505180635406 0.179405313066947 0.182421434491315 0.185343809586564 0.182104256491019 0.182044378761551 0.177842858854528 0.192175993968312 0.182924251838803 0.194722111190119 5 5|0 -|/ 5240908 5241816 5241348.125 5240678 5243330 - gene protein_coding_gene TRUE TRUE AT5G16040.1 regulator of chromosome condensation (RCC1) family protein similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G02510.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96878.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 1.07457304177433 10.0113103157286 1.00266954344700e-06 4.57128658053646e-05 14.1041811036476 9.57238580404136 1.07457304177433 0.117574984829697 AT5G15460_at 6.31537642585877 6.01468466143744 7.54173140265798 7.08527021212101 7.89860187286106 7.4037369874745 6.88840129322686 6.17516164362465 5.64608154742412 6.7061898597926 8.02563534837088 8.17941829543752 7.81191978623122 7.89964058857069 7.67420457886806 7.60307539844456 7.57871413539051 7.52148320800463 6.30954621342725 0.183308520371394 0.175278602108259 0.176036401480775 0.183214297498428 0.168941693541483 0.179734521498825 0.177672091932018 0.179224982043326 0.199667427551749 0.176934740030948 0.172964228952572 0.173952319701094 0.171949347692298 0.171758888187528 0.176286571860103 0.171904452141913 0.188331531168124 0.181417743336769 0.175266531557533 5 5 - 5018957 5020053 5019632.091 5018714 5020706 - gene protein_coding_gene TRUE TRUE AT5G15460.1|AT5G15460.2 MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2) Identical to Membrane-anchored ubiquitin-fold protein 2 (Membrane-anchored ub-fold protein 2) (AtMUB2) (NTGP5) (MUB2) [Arabidopsis Thaliana] (GB:Q8LCS8;GB:Q9LF36); similar to MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G01050.1); similar to ubiquitin-fusion protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96722.1); similar to Os03g0426800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050409.1); contains domain no description (G3D.3.10.20.90); contains domain Ubiquitin-like (SSF54236) 1.35004232830424 10.0045669136836 1.00920982307935e-06 4.59430668037122e-05 14.0982464767609 13.9190542078892 1.35004232830424 0.177528648615435 AT5G48410_at 2.34383793610745 2.17340306208055 4.91165640577888 4.77130303400578 2.27144225489873 2.64220861925155 1.18658406241959 1.29824692407575 1.41807938775610 0.97577641116893 1.16578285298700 1.11980696171183 1.12019057227569 0.91432092676057 0.890981697639668 1.25632569978207 1.77855417900401 1.66280745471454 1.46950490278071 0.237709409317089 0.247875384600477 0.262844931376433 0.253913778810966 0.253323702745385 0.247679900694195 0.243529690261298 0.240435370030148 0.240872062777853 0.239613115883121 0.256574345610053 0.243649186362075 0.240027663543782 0.242293538799038 0.241802389204949 0.239247297967281 0.251945400337008 0.239761726416824 0.247719526288076 5 5|0 +|/ 19639812 19640451 19640187.4 19637493 19640651 + gene protein_coding_gene TRUE TRUE AT5G48410.1 ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 1.3 precursor (Ligand-gated ion channel 1.3) (GLR1.3) [Arabidopsis Thaliana] (GB:Q9FH75); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.924721987426871 10.0039216513927 1.00983807241453e-06 4.59430668037122e-05 14.0976783745582 3.96302688416628 0.924721987426871 0.0771372420542202 AT5G61790_at 10.6641443684750 10.7231296166991 11.6193296845846 11.6877154940324 10.6599561374730 10.5411834461735 9.32581215835431 9.45791825096608 9.06449902023345 9.0395510762468 9.35910648420972 10.0628255892537 9.72620248059792 9.43593113870307 9.83801534146666 9.4559252850495 9.26106753030342 9.59417982868915 8.99548798967695 0.0985543259147781 0.0988199293564131 0.102100819068835 0.102115671570701 0.0985543259147781 0.101234305420133 0.100729885047826 0.0985543259147781 0.109643942916060 0.105167660046459 0.103823073478870 0.0985543259147781 0.0985543259147781 0.0985543259147781 0.0985543259147781 0.0986794791575692 0.104913342509011 0.0985543259147781 0.111008018653242 5 5|0 -|/ 24844634 24845454 24845146.4 24844328 24847017 - gene protein_coding_gene TRUE TRUE AT5G61790.1 calnexin 1 (CNX1) Identical to Calnexin homolog 1 precursor (CNX1) [Arabidopsis Thaliana] (GB:P29402); similar to calnexin, putative [Arabidopsis thaliana] (TAIR:AT5G07340.1); similar to calnexin homolog (GB:AAA17742.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE80216.1); similar to putative papillar cell-specific calnexin [Brassica napus] (GB:AAK84429.1); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580) 0.821386219836982 10.0015703930694 1.01213093201394e-06 4.59991138538925e-05 14.0956079383729 19.897316680513 0.821386219836982 0.0344873459196029 AT5G59560_at 4.33665015290204 4.61849369172996 5.18345852154337 5.53290092457893 6.05273009438060 5.4949217471157 4.50869106370913 4.42232922175556 4.11445499196891 4.11808678438685 5.48954357526775 5.60673683322558 5.41408147002582 5.59666971535007 5.23727974220088 5.6035487134804 5.05067673064003 4.99666841088923 4.55644255477446 0.256483365488738 0.250706147139809 0.254559702280577 0.244988138766289 0.245866643558190 0.249053824171288 0.253137234670007 0.250677671110690 0.253660067977798 0.249941701030823 0.254950311429333 0.249556592476753 0.244304785800181 0.246767376484843 0.250304797001439 0.244304785800181 0.268253043152865 0.265226363378883 0.257052088014477 5 5 - 24017982 24018537 24018251.727 24017782 24019183 - gene protein_coding_gene TRUE TRUE AT5G59560.1|AT5G59560.2 SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. Identical to Protein SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1) [Arabidopsis Thaliana] (GB:Q8GWZ6;GB:Q9LTH5); similar to PREDICTED: similar to SRR1-like protein isoform 2 [Mus musculus] (GB:XP_996537.1); similar to Os05g0118000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054477.1); similar to PREDICTED: similar to SRR1-like protein isoform 12 [Mus musculus] (GB:XP_927898.1); contains InterPro domain SRR1; (InterPro:IPR012942) 1.10293383061102 9.99206765829906 1.02145538440128e-06 4.63742792504361e-05 14.0872347227956 9.8374696401786 1.10293383061102 0.124810005343400 AT5G06260_at 8.75892632921396 8.8497683578993 9.51991038003757 9.62762824468521 9.88936557019326 9.52218719491732 8.80811294084265 8.55630082272988 8.2244630328893 8.45920434490712 9.3373966093125 9.38605239115896 9.27677496795077 9.25485841644757 9.1154984787398 9.46183437787647 9.33146327266599 9.42948214405012 8.367208074352 0.175199964060572 0.171449102291016 0.179799220863013 0.166897030621996 0.173654495534223 0.178354723471721 0.165632489117042 0.182272962723605 0.182358942950590 0.180172741586211 0.169986384812168 0.167088770874050 0.164184288339343 0.177860112608283 0.172401534071187 0.166525351918518 0.164184288339343 0.175912966074673 0.184862982148254 5 5 - 1902771 1903515 1903147.2 1902600 1905102 - gene protein_coding_gene TRUE TRUE AT5G06260.1 nucleolar protein-related similar to calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G34070.1); similar to PREDICTED: similar to CG5149-PA [Canis familiaris] (GB:XP_546801.2); similar to Os12g0157200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066200.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain TLDc; (InterPro:IPR006571) 0.93518699983968 9.98954837790462 1.02394300857535e-06 4.64317330387317e-05 14.0850134273409 18.0287559298939 0.93518699983968 0.0808157339895621 AT5G21090_at 11.7572054455271 12.0550250913951 12.8030208571589 12.7206297414232 12.6136958726563 12.4485657520004 11.4729786589679 11.5877628209113 11.3053662084750 11.1842722030087 12.0820200000596 12.1176192152457 12.1725870127753 11.9964140681733 12.0829415148325 11.9909030069712 11.6595129938074 12.1754386371689 11.094583955099 0.0985889750773873 0.0911523186635278 0.095586941881333 0.0929949102160247 0.0911523186635278 0.0944997055611577 0.0911523186635278 0.092845599718903 0.0980974181699957 0.0946072801659354 0.0914348052321903 0.0911523186635278 0.0929823803321223 0.0983630993085472 0.0911523186635278 0.0911523186635278 0.0961458682657137 0.0948393846986092 0.0953735163705469 5 5|0 +|/ 7164822 7166880 7165553.7 7164614 7167257 + gene protein_coding_gene TRUE TRUE AT5G21090.1 leucine-rich repeat protein, putative similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G43740.1); similar to Leucine-rich repeat, plant specific [Medicago truncatula] (GB:ABE82625.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.884086909438835 9.98861866003968 1.02486270459144e-06 4.64317330387317e-05 14.0841935231525 23.7970707025001 0.884086909438835 0.0638025575215819 AT5G61040_at 4.85083900241997 5.07894631513337 5.80976206907856 5.60103038970028 6.78969126949334 6.40357384797547 5.30745483827383 4.9885100180143 4.42832575119722 4.82393977377887 5.40895886785356 5.79503768733538 5.5813073055282 5.49908887702547 5.43796732589246 5.96462578493322 6.05213254929077 5.0922433421948 4.78618394206862 0.230555241966009 0.232914681362844 0.232335952109619 0.231846915403630 0.232755275574876 0.231831889366149 0.230202452720164 0.230553756178900 0.239522312823923 0.233382394401862 0.230975874480437 0.230202452720164 0.233148390664863 0.243957067679583 0.234243606824551 0.230202452720164 0.236362288952298 0.230202452720164 0.232457405729167 5 5 - 24579703 24580206 24580018.727 24579559 24582185 - gene protein_coding_gene TRUE TRUE AT5G61040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08010.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99007.2) 1.00950695621335 9.98731495594075 1.02615386606396e-06 4.64417010994311e-05 14.0830436653616 10.7454276553553 1.00950695621335 0.101854735958597 AT5G02480_at 9.88610689543618 9.81972190638075 10.1916859967387 10.3828737873842 10.5768417433323 10.3983525117466 9.88344510990665 9.75150128726205 9.1138781492109 9.46910973424052 10.2840427964438 10.8538849346491 11.0140361590534 10.5979101497572 10.4235698672692 10.8952736646972 10.6731401085117 10.6786087677336 9.98216872946108 0.0712314757380347 0.0700669453117788 0.076062134241708 0.0712204185341414 0.0695970930241617 0.0757568458085311 0.072100832673556 0.0709022582059756 0.083016096816046 0.074546265951603 0.0707069460384745 0.0701378640719434 0.069758035740735 0.0690779524311671 0.0696943975140045 0.0693431622028461 0.0725534543873794 0.0687089186132822 0.0719688610753992 5 5 + 549094 549643 549330 547561 549910 + gene protein_coding_gene TRUE TRUE AT5G02480.1 similar to SLT1 (SODIUM- AND LITHIUM-TOLERANT 1) [Arabidopsis thaliana] (TAIR:AT2G37570.1); similar to SLT1 protein [Nicotiana tabacum] (GB:AAG39002.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.85404207254882 9.9845193691633 1.02892851379561e-06 4.65187180252663e-05 14.0805774234275 20.2109547432661 0.85404207254882 0.0519819213411035 AT5G59830_at 6.23815036593936 6.7418689968116 7.26077049908883 7.09360294722149 7.7274962629074 7.58057646629337 6.02735931077446 6.13896006935141 5.67731068418027 6.33202761227792 6.94010297312121 7.08187429603867 7.04659874824015 6.72468803901549 7.06778224833053 7.49971484331636 7.10963236214056 6.89428233996926 6.56388613221745 0.195411742746383 0.183923587922746 0.198636079172085 0.183923587922746 0.194448239782148 0.205184163337140 0.191130206195638 0.189986351859448 0.207776716929054 0.198095570643133 0.200646492850691 0.183923587922746 0.1845411405906 0.199394950297416 0.200062524491039 0.187448445854532 0.195112967194079 0.189540967231064 0.189275019866938 5 5|0 +|/ 24123497 24124243 24123832 24122304 24124459 + gene protein_coding_gene TRUE TRUE AT5G59830.1|AT5G59830.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13660.1); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14274.1) 0.991768264935772 9.98308002836453 1.03036024880851e-06 4.65349235367973e-05 14.0793073548652 13.4694277602135 0.991768264935772 0.097237258999996 AT5G43330_at 5.65067844642174 6.41719450805722 6.92079307741797 7.16050499352758 7.73203148576244 7.20172865587355 6.63581727946473 6.78807203602309 4.86756853165773 5.09714211072466 6.80544454896977 7.2559535872243 7.12343903561452 7.18917793563487 7.0552721579861 6.77921034498377 6.29753110645304 6.56800357075225 5.51179710480642 0.207378375541371 0.201020100154854 0.226616138152736 0.211636046667256 0.19691321258826 0.210008822800754 0.212180702921762 0.199366653380183 0.211847759041065 0.214789745147510 0.206101250832228 0.19691321258826 0.197475999749370 0.207267347458697 0.198330538246689 0.205859314647273 0.214388248601063 0.215594027643343 0.2057491563081 5 5 + 17408743 17409644 17409089.818 17407661 17409873 + gene protein_coding_gene TRUE TRUE AT5G43330.1 malate dehydrogenase, cytosolic, putative Identical to Malate dehydrogenase, cytoplasmic 2 (EC 1.1.1.37) [Arabidopsis Thaliana] (GB:P57106;GB:Q9LSX3); similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT1G04410.1); similar to malate dehydrogenase-like protein [Solanum tuberosum] (GB:ABC01890.1); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NAD-dependent, cytosolic; (InterPro:IPR011274); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557) 1.30312105293821 9.98163036130262 1.03180444162211e-06 4.65516573773890e-05 14.0780279718216 12.8348975361595 1.30312105293821 0.168620549840575 AT5G59300_at 6.289037725787 6.60195622225059 7.09995991717353 7.13426356690266 7.59924668285137 7.25905689722809 6.846334149489 7.02933075399237 6.01754067918289 5.85647501390231 7.4104659842212 7.26056258759776 7.19813783281057 7.13386180101817 6.85918157734124 7.22201346893609 7.02109888872097 6.99761357831982 5.57148531302374 0.222179990826581 0.210746733237664 0.222769677366228 0.228132895108186 0.22035598272588 0.231331716014826 0.213683373614429 0.219022360707153 0.221874206107587 0.243349888445808 0.210148240388385 0.216895651259887 0.223319507843138 0.219834369579588 0.211895596077476 0.210148240388385 0.223067037742816 0.235771923243758 0.231146179172457 5 5 - 23937283 23938425 23937972.727 23937094 23938517 - gene protein_coding_gene TRUE TRUE AT5G59300.1 UBC7 (ubiquitin-conjugating enzyme 7); ubiquitin-protein ligase ubiquitin conjugating enzyme E2 Identical to Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) (UBC7) [Arabidopsis Thaliana] (GB:Q42540;GB:Q8RXQ3); similar to UBC13 (ubiquitin-conjugating enzyme 13), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G46460.1); similar to Os01g0839700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044755.1); similar to ubiquitin-conjugating enzyme [Arachis hypogaea] (GB:ABI84264.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.952083507996793 9.97710927660243 1.03632258360953e-06 4.66885466130998e-05 14.0740366463697 13.4589152229128 0.952083507996793 0.086234646778629 AT5G51430_at 7.67167515711893 8.14668160554973 8.69354895500602 8.57939875077855 8.89187889183753 8.67218432263198 7.47728577659417 7.53312511468984 7.71792029897414 7.43519370829912 8.5259155854105 8.53372875306005 8.33652039237725 8.41850338622078 8.59444742648098 8.5174089029237 8.06312042454344 8.55456864109519 7.32371440994123 0.176338002881904 0.164741540538770 0.178650498918667 0.177894769310453 0.166962798047111 0.192188867452683 0.165608148397455 0.168970720356240 0.171451238622132 0.171793386578832 0.164629976298746 0.165010097574826 0.161621449858468 0.171228009361059 0.169463166805383 0.168033464965561 0.173756950042646 0.167878980240722 0.166918810704227 5 5 - 20904300 20904925 20904610 20904064 20908133 - gene protein_coding_gene TRUE TRUE AT5G51430.1 conserved oligomeric Golgi complex component-related / COG complex component-related similar to oligomeric gol (GB:BAD45448.1); similar to unnamed protein product; contains similarity to unknown protein gb|AAF56975.1 gene_id:MFG13.14 [Medicago truncatula] (GB:ABE92104.1); similar to unnamed protein product; contains similarity to unknown protein gb|AAF56975.1 gene_id:MFG13.14-related [Medicago truncatula] (GB:ABE92095.1); contains domain gb def: Similarity to unknown protein (PTHR21443:SF2); contains domain FAMILY NOT NAMED (PTHR21443) 0.976405683258923 9.97644102156111 1.03699222342012e-06 4.66885466130998e-05 14.0734465263992 16.1758737358186 0.976405683258923 0.0932000397026905 AT5G64760_at 5.68624783333748 5.37591313476596 6.86137188746162 6.47444417126901 6.79669144073826 6.25416627613756 5.51464473723057 5.94922889645247 5.17521425777844 4.85309089951909 6.35581765053361 6.77089421476316 6.21358878593832 6.59011098461268 6.97266707196716 6.63672440002055 6.35922351966683 6.2093871154517 5.19066267925284 0.248432342409571 0.240774535499446 0.235454175882697 0.237667877849878 0.235454175882697 0.244528400330132 0.238799006669773 0.242867618188794 0.253319160615396 0.245797363391808 0.238029127544537 0.235454175882697 0.247681188770432 0.241022209908392 0.244458220087702 0.237177333432767 0.257828386365422 0.24880724665601 0.236085639064612 5 5|0 -|/ 25911342 25912057 25911701.1 25911006 25913808 - gene protein_coding_gene TRUE TRUE AT5G64760.1|AT5G64760.2 26S proteasome regulatory subunit, putative (RPN5) similar to EMB2107 (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.1); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to EMB2107 (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.2); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 1.20286111623706 9.97174055155485 1.04171572558234e-06 4.6852560348644e-05 14.0692944320372 11.9073590455338 1.20286111623706 0.14777871553848 AT5G50380_at 7.87808378307166 8.25868626192637 8.86652772405623 9.0188730166131 9.27839975158249 9.12518241738103 7.65730464540964 7.92924985238767 7.68254906383837 7.66113862822312 8.62490440454473 8.57518245897048 8.45436105446998 8.52698239130007 7.90552877489925 8.83060280419433 8.14649420161636 8.65840613494741 7.70794459449708 0.163878820788597 0.160711874644657 0.165876950351567 0.160954888495328 0.16512881485767 0.165432467724559 0.156422026208770 0.160568274187138 0.167848703367348 0.169746025896933 0.159675196248068 0.162098565756698 0.156429863462976 0.168909734796090 0.157357091394338 0.155055676330143 0.172445579378557 0.160214947602713 0.177139838110978 5 5 - 20533615 20534129 20533886.273 20533338 20535799 - gene protein_coding_gene TRUE TRUE AT5G50380.1 ATEXO70F1 (exocyst subunit EXO70 family protein F1); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70D3 (exocyst subunit EXO70 family protein D3), protein binding [Arabidopsis thaliana] (TAIR:AT3G14090.1); similar to putative leucine zipper protein [Oryza sativa (japonica cultivar-group)] (GB:BAB86177.1); similar to Os04g0382200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052606.1); similar to Os02g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046915.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.96142247048717 9.96903708650976 1.04444301238662e-06 4.69069392667956e-05 14.0669053942430 16.5761310350389 0.96142247048717 0.0891688538232464 AT5G14430_at 8.46001411174998 8.44621054014436 8.85768078990954 8.9991287855928 9.23483878711958 9.1073253259345 8.13356232595729 8.25327951769816 8.207983667672 8.0821947566351 9.15802895467744 9.33552819712275 9.18016609109052 8.92149128735182 9.1755909710925 9.54019767960586 8.82016947182248 9.10313731316556 8.39469835528175 0.134817097698178 0.129693790550351 0.134238667062029 0.132918398410090 0.143346479127817 0.142344401383981 0.127118675040150 0.125890088027770 0.151440881432532 0.135775904226353 0.130222593469853 0.13791928027707 0.126938831437571 0.132316068012054 0.137631920111250 0.132076981916154 0.135765522778035 0.138647600916151 0.134534811640852 5 5 + 4654986 4655662 4655355.545 4652983 4655976 + gene protein_coding_gene TRUE TRUE AT5G14430.1|AT5G14430.2 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G04430.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G23300.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT4G14360.2); similar to dehydration-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47791.2); similar to dehydration-responsive protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46056.1); similar to Protein of unknown function DUF248, methyltransferase putative [Medicago truncatula] (GB:ABE90857.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.826236642064909 9.9683983325649 1.04508852604885e-06 4.69069392667956e-05 14.0663408272806 17.3777955258153 0.826236642064909 0.0390006868534758 AT5G05780_at 9.24767296272594 9.45217574260475 10.1600693552856 10.2817494527311 10.2760248961943 9.91752496787194 9.6456073702988 9.3834937167278 8.82076228239277 8.57031752575891 10.1491877635986 10.0750115222831 9.6456804452275 9.75965702348474 10.2090600681432 9.91780934707481 9.79449817503617 9.52552834148742 8.72079832470366 0.101697146764436 0.103394901654473 0.101745608806110 0.100557258873798 0.100557258873798 0.105244078907892 0.100557258873798 0.103766000765843 0.125885204073989 0.110954585471075 0.101835673263262 0.102730049236877 0.108017243245000 0.106512110117157 0.108164201760374 0.10214250491324 0.112045517794383 0.112557921572304 0.108760912539005 5 0|5 /|+ 1736943 1738141 1737717 1735731 1738493 + gene protein_coding_gene TRUE TRUE AT5G05780.1 ATHMOV34 (ASYMMETRIC LEAVES ENHANCER3) Encodes a 26S proteasome subunit. Identical to Probable 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (MOV34 protein) (RPN8) [Arabidopsis Thaliana] (GB:O24412); similar to MEE34 (maternal effect embryo arrest 34) [Arabidopsis thaliana] (TAIR:AT3G11270.1); similar to 26S proteasome regulatory particle non-ATPase subunit8 [Oryza sativa (japonica cultivar-group)] (GB:BAB78487.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639) 0.953599714052467 9.95875028883592 1.05489152302880e-06 4.72920758175673e-05 14.0578085259637 19.0897965397602 0.953599714052467 0.0871915962226585 AT5G06600_at 8.78808012888987 8.62466887509219 9.31534396164045 9.3328416539685 9.0933898854429 8.97017538857625 8.2434481165979 8.67716544822642 8.46028468989115 8.28924751413671 9.58014155520464 9.63118963348604 9.65692893007825 9.61175006192003 9.57414628429324 9.5799194165276 9.33166695103862 9.12466741619682 7.93155022878523 0.127221319093763 0.128259753387009 0.124703931616614 0.125521422037169 0.128454217970594 0.127705663283501 0.135614417031468 0.128115205953378 0.143782786181171 0.133602232081776 0.123282161427186 0.124223010329829 0.124098579224309 0.123436143881882 0.128117705663867 0.122137319070103 0.130920036892228 0.123268639899308 0.149301335886891 5 5|0 -|/ 2019564 2020921 2019977.333 2019108 2027946 - gene protein_coding_gene TRUE TRUE AT5G06600.1|AT5G06600.2 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin-specific protease, putative [Arabidopsis thaliana] (TAIR:AT3G11910.1); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94399.1); similar to ubiquitin-specific protease 12, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98280.2); similar to putative ubiquitin-specific protease [Oryza sativa (japonica cultivar-group)] (GB:BAC83609.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Small acid-soluble spore protein, alpha/beta type; (InterPro:IPR001448); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.93943544184711 9.95666719234289 1.05702114937733e-06 4.72920758175673e-05 14.0559651422048 17.7498035616531 0.93943544184711 0.0830485604935952 AT5G47370_at 7.86134867273256 7.92100219531962 9.27921667293103 9.51453289925583 9.36999281236701 9.35648076193981 7.97448091710628 8.45005525355276 9.56001409016605 8.10518184914793 9.66918759173275 10.0770274217253 9.66663097939013 8.99754518899302 10.4143227036169 9.79019806959202 9.37074556575683 9.01642692905275 9.3654038555875 0.163278185380942 0.156874202008564 0.157575830667306 0.152872340965650 0.149421258961863 0.153214271674080 0.169376235842357 0.157767639132107 0.163194098276225 0.172952492382271 0.152745975515326 0.152149918950140 0.152714720693605 0.154344212615187 0.151177038742705 0.149421258961863 0.162605962568747 0.160315794020757 0.155257607021642 5 5 - 19233716 19234412 19234018.636 19233539 19235136 - gene protein_coding_gene TRUE TRUE AT5G47370.1 HAT2; transcription factor homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. Identical to Homeobox-leucine zipper protein HAT2 (Homeodomain-leucine zipper protein HAT2) (HD-ZIP protein 2) (HAT2) [Arabidopsis Thaliana] (GB:P46601;GB:Q546H4;GB:Q9LVS2); similar to HAT1 (homeobox-leucine zipper protein 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17460.1); similar to homeobox-leucine zipper protein, putative [Brassica oleracea] (GB:ABD64984.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain HD-ZIP protein, N-terminal; (InterPro:IPR006712) 0.971697325772129 9.95637641354362 1.05731879424503e-06 4.72920758175673e-05 14.0557077913208 18.0336190170838 0.971697325772129 0.0924322194288921 AT5G61220_at 6.79838165389478 7.21263546720735 8.38656493882938 8.44739929201286 8.43903187938137 8.10959485008299 8.04312807544837 7.60050751681358 5.62774201638751 6.63852910184998 7.4664180448302 7.33461978600163 7.37692680250565 7.08343317653702 7.76617132128409 7.52813074455391 8.05893482251818 7.43444781030693 6.57954732093445 0.207554406147981 0.20029898815627 0.200694481703358 0.20029898815627 0.20029898815627 0.202164084690348 0.20029898815627 0.207992619477338 0.224637571331325 0.202079889577262 0.20029898815627 0.203618158141217 0.20029898815627 0.209776868084910 0.200865761230886 0.201551404466069 0.203474866359294 0.210833460347415 0.205070584197201 5 5 - 24643304 24643508 24643403.727 24642799 24644149 - gene protein_coding_gene TRUE TRUE AT5G61220.1 complex 1 family protein / LVR family protein similar to Os10g0406600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064565.1); similar to hypothetical protein MtrDRAFT_AC149131g15v1 [Medicago truncatula] (GB:ABD32562.1); similar to Os08g0239000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061327.1); contains InterPro domain Complex 1 LYR protein; (InterPro:IPR008011) 1.07809019778943 9.95567962666964 1.05803240438205e-06 4.72920758175673e-05 14.0550910736169 14.7736928558544 1.07809019778943 0.119864405695598 AT5G55810_at 4.22432546773513 4.01249556224024 5.52564573703035 5.69187562663757 6.17152957674376 4.82769743779231 3.7130921531703 3.42972836061349 2.80559587300108 3.32737836758147 4.56371586064979 4.35975397635912 4.54179248531434 4.52304253099782 4.62812102809835 4.85512623513401 4.56061763255772 4.2207684924232 2.51626741556968 0.340074892718517 0.333233852812129 0.333233852812129 0.333233852812129 0.335155660424701 0.359666565526592 0.333233852812129 0.333233852812129 0.35239506004124 0.369547683219298 0.333233852812129 0.3357795342936 0.333233852812129 0.355070104073786 0.334761108660543 0.333233852812129 0.356031929913614 0.357998629558238 0.352778994594233 5 5|0 -|/ 22601846 22602303 22602045 22601234 22603527 - gene protein_coding_gene TRUE TRUE AT5G55810.1 nicotinamide-nucleotide adenylyltransferase, putative / NAD(+) pyrophosphorylase, putative encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity. similar to PREDICTED: similar to Nicotinamide nucleotide adenylyltransferase 3 [Gallus gallus] (GB:XP_422634.2); similar to Os02g0814900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048497.1); contains InterPro domain Probable nicotinate-nucleotide adenylyltransferase; (InterPro:IPR005248); contains InterPro domain Cytidylyltransferase; (InterPro:IPR004820) 1.67890671837613 9.95016499147187 1.06369866122733e-06 4.74963815921987e-05 14.0502084724827 8.40689765636666 1.67890671837613 0.242195188744759 AT5G18690_at 1.24900733524640 1.29860874545996 2.03384585611639 1.57492765994087 1.58850052642914 1.78487961031677 1.36118401903307 1.52913889864930 2.59107712905305 2.11545528121833 4.09452672248651 4.11859307238286 3.81582962559632 3.94016118402555 4.93169442934641 3.28200854581943 2.92387155342651 3.86893421778927 2.26067989950476 0.255921053770544 0.256268418516855 0.255114972367207 0.253563686173940 0.26409845942155 0.257511712248015 0.259200243681858 0.25640444382836 0.255123386928957 0.25935737197866 0.273026950229700 0.263635973935347 0.252575443047627 0.261005367248280 0.273499578212507 0.254790379591966 0.260240083597871 0.257420627185023 0.253300767217309 5 5 - 6233916 6234103 6233994.636 6233521 6234208 - gene protein_coding_gene TRUE TRUE AT5G18690.1 AGP25/ATAGP25 (ARABINOGALACTAN PROTEINS 25) Identical to Classical arabinogalactan protein 25 precursor (AGP25) [Arabidopsis Thaliana] (GB:Q6NN00); similar to AGP27 (ARABINOGALACTAN PROTEIN 27) [Arabidopsis thaliana] (TAIR:AT3G06360.1); similar to Os01g0937900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045338.1) 0.967800989602002 9.9487056993075 1.06520358101591e-06 4.75146457010822e-05 14.0489159357941 4.6496898424579 0.967800989602002 0.0915457203594419 AT5G01960_at 6.82692956373918 6.95008287715058 8.05875625011457 8.01451847440985 8.26643085284465 7.85924732789446 6.88300420521123 6.58398955886713 7.41420317828041 6.88831505775648 8.0216802328666 7.9031047757561 7.88861540033337 7.77665164039441 7.20929230731217 7.84897147296283 7.91970803511208 7.99728038136245 7.10663607875529 0.155888485472504 0.160954435746125 0.15754966274044 0.162295155954825 0.159062293992304 0.168911734579642 0.164641529694599 0.164158729622158 0.163838380227104 0.172066197417959 0.154875886466076 0.15665312009718 0.151288565731343 0.169623790960204 0.164243246934650 0.155279270049234 0.174806201750909 0.159018458969424 0.156053073805470 5 5|0 +|/ 371672 372730 372293.5 370397 372966 + gene protein_coding_gene TRUE TRUE AT5G01960.1 zinc finger (C3HC4-type RING finger) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65040.3); similar to Os05g0316000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055172.1); similar to Os01g0168400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042129.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV32165.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.96150746711948 9.92870177743538 1.08606760236019e-06 4.83621222230507e-05 14.0311770065484 14.9088937899589 0.96150746711948 0.0903093189017408 AT5G06130_at 8.88472440958532 8.92097290511021 9.4396428222268 9.55870816049233 10.0450288542151 9.58378972319287 8.97641364775169 8.99701425118667 8.22712032720244 8.53831482380356 9.50161873357062 9.60475554845538 9.64070659996819 9.5731805893234 9.67795510007792 9.82723154244515 9.25974095184414 9.58517904958272 8.50781126722603 0.139000270684775 0.127511041394347 0.126518515150083 0.130267934408480 0.132195604839946 0.137261433883123 0.126518515150083 0.128269731838784 0.160975767004970 0.147757566008055 0.133210248537485 0.130264010493624 0.127910269607275 0.130151828297424 0.132616033353625 0.127031377214427 0.14393463686714 0.128944121049225 0.138850419994791 5 5|0 -|/ 1853933 1855145 1854598.25 1853433 1855889 - gene protein_coding_gene TRUE TRUE AT5G06130.1|AT5G06130.2 chaperone protein dnaJ-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61670.2); similar to Os02g0651300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047593.1); similar to Os02g0535000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047038.1); similar to chaperone protein dnaJ-related (ISS) [Ostreococcus tauri] (GB:CAL57920.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.935695814143863 9.92742537596221 1.08741385686775e-06 4.83621222230507e-05 14.0300438061232 18.3048925902963 0.935695814143863 0.0827513364396617 AT5G11850_at 5.94294759214865 5.73658741128025 6.58479405905868 6.57016982642449 6.80840457779879 6.4860088731077 5.46945270785406 5.35674497202014 6.00603292667112 5.51057965431706 6.54393931077362 6.71263722065529 6.69971956675221 6.74738356669955 6.70773841142102 6.83293881999831 6.64126036048851 6.25423324068341 6.00778679161339 0.137775983662538 0.140594403883283 0.140724836838669 0.140586098127603 0.141357287916602 0.142117770972478 0.148740134927571 0.146592318985273 0.145000804740072 0.145382005328930 0.145111486885318 0.139514463029084 0.138900421103037 0.146402558438880 0.143603763221654 0.137775983662538 0.138015719728067 0.146080838164343 0.141567084940898 5 5|0 -|/ 3816965 3817921 3817469.3 3816347 3821073 - gene protein_coding_gene TRUE TRUE AT5G11850.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G73660.1); similar to EDR1 (ENHANCED DISEASE RESISTANCE 1), kinase/ protein threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT1G08720.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G18160.1); similar to CTR1-like kinase kinase kinase [Brassica juncea] (GB:AAP86285.1); similar to putative MAP3K delta-1 protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17616.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.893463008960887 9.92729736296835 1.08754897547237e-06 4.83621222230507e-05 14.0299301463017 12.3613626373205 0.893463008960887 0.0691007113428343 AT5G11800_at 5.32783340457461 5.34869947805366 5.36105875095333 5.4572892082994 5.89776791171027 5.67830938186323 4.7011223198912 4.74744125140316 4.73046677419832 5.15706822176321 6.35881991487767 6.32558181084385 6.38466714305224 5.8320948338633 6.04735561271615 6.21471303314812 5.76181017379488 6.01594815053296 5.19435056090050 0.203027555985670 0.203889712055669 0.218451679522138 0.207521609834949 0.205070230078772 0.219202092112651 0.221607458294792 0.208206930471234 0.214840269236934 0.205478861193266 0.208511739760956 0.211284391864031 0.211828397500550 0.213387339243368 0.207715682096805 0.204554651006971 0.213521943274619 0.208918856836754 0.211365710506866 5 5|0 -|/ 3803644 3804617 3804316.571 3803337 3808208 - gene protein_coding_gene TRUE TRUE AT5G11800.1 KEA6 (K+ efflux antiporter 6); potassium:hydrogen antiporter member of Putative potassium proton antiporter family similar to ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G19600.1); similar to KEA5 (K+ efflux antiporter 5), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G51710.1); similar to Os06g0561200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057872.1); similar to Putative potassium/proton antiporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19118.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.82883042410443 9.9246325771255 1.09036581733686e-06 4.84377044257648e-05 14.0275637808559 10.8873997232058 0.82883042410443 0.0423906870038473 AT5G54430_at 8.3675514504678 8.89453443036598 9.48973786970166 9.65282854821806 9.7951986610081 9.5108689311603 8.53834411742329 8.83024557695901 7.87217234862743 7.10483556318407 8.86847339051436 8.72521693069199 9.02734119369598 9.01576057689756 8.66217186086689 8.92819634855625 8.65186954239627 8.65429200725914 7.92165548801037 0.167835224142318 0.164223902908134 0.163562526342240 0.163572736300044 0.169724722352170 0.174684381379621 0.161730769901444 0.166784334763853 0.187765410564677 0.209348772025377 0.164847065447794 0.161730769901444 0.161730769901444 0.168267982738770 0.163293016346345 0.165964925004026 0.175173536254408 0.169499011558462 0.182476461940587 5 5 - 22116204 22116766 22116525.909 22114392 22116984 - gene protein_coding_gene TRUE TRUE AT5G54430.1 universal stress protein (USP) family protein similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT4G27320.1); similar to Os07g0551400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059943.1); similar to CHP-rich zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC65369.1); contains InterPro domain Universal stress protein (Usp); (InterPro:IPR006015); contains InterPro domain UspA; (InterPro:IPR006016) 1.0691335200686 9.9180246447607 1.09738502933400e-06 4.86868786199844e-05 14.0216928603891 17.3596902138132 1.0691335200686 0.118685663608871 AT5G51410_at 6.63806168769065 7.14964350679964 7.83287335803513 7.68504904782083 7.78025592413358 7.8205042322127 6.87725536620764 6.47774195327672 6.24642948319182 6.66020310002127 7.61042789468506 8.22458079676212 7.08881357225821 7.43753514865118 7.55327990799113 7.81337879081304 7.88841347660258 6.38131897866568 6.24058722645202 0.189764632077012 0.187251256566849 0.19447293845927 0.187251256566849 0.192688725406618 0.199484054127392 0.192219391093870 0.19371034385321 0.202152885546514 0.198756192385961 0.191437785640056 0.187313554103535 0.193420090861689 0.188776798641643 0.187251256566849 0.189739114438213 0.190956866791466 0.198430930321014 0.193168369566750 5 5 - 20899057 20899597 20899374.636 20897967 20900930 - gene protein_coding_gene TRUE TRUE AT5G51410.1|AT5G51410.2 LUC7 N_terminus domain-containing protein similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to salt tolerance protein 3 [Beta vulgaris] (GB:CAC85244.1); contains InterPro domain LUC7 related; (InterPro:IPR004882) 1.05565348981941 9.91724095032572 1.09822074887684e-06 4.86868786199844e-05 14.0209962922276 14.2237357215348 1.05565348981941 0.115415768958267 AT5G58430_at 9.15295926049049 9.31824798029784 9.86840372937883 10.0055104586836 10.1836853970315 10.0425053544454 8.44611675183831 8.69153168066226 9.00352416173066 8.79974392295404 9.71618354036926 9.58667519545754 9.4211701877044 9.54923992987574 9.46845791860492 9.54235969971877 9.25509715077819 9.47800735469504 8.84364013594702 0.108199753595905 0.100964983852308 0.110382879924452 0.100733813837697 0.105180604749853 0.102670231817298 0.101009195580977 0.1086995690882 0.124581167825629 0.105985090206238 0.0996958646381886 0.0996958646381886 0.102346822362763 0.103348533022558 0.103928653304497 0.101051799158629 0.104727018674202 0.101870389498062 0.109659264545516 5 5 - 23638697 23639255 23638900.182 23638409 23640670 - gene protein_coding_gene TRUE TRUE AT5G58430.1 ATEXO70B1 (exocyst subunit EXO70 family protein B1); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70B2 (exocyst subunit EXO70 family protein B2), protein binding [Arabidopsis thaliana] (TAIR:AT1G07000.1); similar to unnamed protein product [Solanum lycopersicum] (GB:CAA78112.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.871329224251263 9.91384692329595 1.10184806863142e-06 4.87977913048858e-05 14.0179788998749 18.6558458827841 0.871329224251263 0.061496261743831 AT5G04020_at 6.09060246255937 6.08804213015569 5.98922895022072 6.15360087840424 6.35681363425793 6.13722750439619 4.86429677913989 4.73136372780275 5.80058074200335 5.43635542894436 6.69980094724082 6.99703152535228 6.38904870710629 6.8715438365046 6.5025420295414 6.32543818090357 6.22737543282663 6.71570111037974 5.58868496521212 0.194951952145497 0.197321937867353 0.196255906422206 0.196768282969171 0.198905761648074 0.201041471161151 0.201725590536805 0.202465704630744 0.194951952145497 0.203819031564661 0.194951952145497 0.194951952145497 0.194951952145497 0.200324482153713 0.196691168451561 0.199820728487491 0.200649613732200 0.203100701777535 0.195114552879765 5 5 - 1081979 1082526 1082174.455 1081610 1086545 - gene protein_coding_gene TRUE TRUE AT5G04020.1 calmodulin-binding protein-related (PICBP) similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38800.1); similar to Calmodulin-binding, plant [Medicago truncatula] (GB:ABE94197.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.84908065470866 9.90594635537819 1.11034215619517e-06 4.90882469554784e-05 14.0109506986678 11.9011973083430 0.84908065470866 0.0527501587770571 AT5G26240_at 7.81493024293478 7.89357252263902 9.0487733422194 8.94838773613598 9.32170977319889 8.84843514366277 8.19948189589833 7.69856969134296 7.36408440532895 7.38217561246556 8.6993418459492 8.51790846455454 8.50870127722553 8.39576133575844 7.93478830455282 8.57682736661465 8.54704502354019 8.19412416561212 7.46834234611652 0.174382836315900 0.168426605780906 0.171620279572455 0.167505388519314 0.170543734856751 0.170748640052414 0.173984109272188 0.177998657812344 0.202536181200553 0.166944061932305 0.175229848341228 0.166768203538384 0.176666024061505 0.178757222628480 0.172597217207713 0.165858622788209 0.178515629116457 0.193697440804967 0.183442583673654 5 0|5 /|+ 9193472 9194321 9193805.778 9189527 9194734 + gene protein_coding_gene TRUE TRUE AT5G26240.1 CLC-D (chloride channel D); anion channel/ voltage-gated chloride channel member of Anion channel protein family Identical to Chloride channel protein CLC-d (AtCLC-d) (CLC-D) [Arabidopsis Thaliana] (GB:P92943;GB:O81491); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to Chloride channel protein CLC-d, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98345.1); similar to putative CLC-d chloride channel protein [Oryza sativa (japonica cultivar-group)] (GB:AAO19370.1); similar to Chloride channel protein CLC-d, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98346.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) 1.07856633946971 9.9056419152436 1.11067088585808e-06 4.90882469554784e-05 14.0106797522125 16.3850723823105 1.07856633946971 0.121282035947812 AT5G13180_at 11.1179732309838 11.3901035450284 11.8953930085082 11.9816077441013 12.3370052335665 12.2471650408248 10.7706461724346 11.0725642472352 10.1856297404218 10.7792485193922 11.2784361077676 11.3780606264429 11.7914567930676 11.4858514673166 11.0365788982933 11.4923963034252 11.6508764070624 11.1504969006934 10.9219110376908 0.0792434742124701 0.0761862236838039 0.0769220374971564 0.0761862236838039 0.0789815403669025 0.0794255024260323 0.0768895572170182 0.0763731668889775 0.0858616643196994 0.0783455531335972 0.0761862236838039 0.0762223711406763 0.0762773456566685 0.0761862236838039 0.0769986181426629 0.0761862236838039 0.0808456100147475 0.0811778875798585 0.0785883066237372 5 0|5 /|+ 4196935 4197515 4197235.9 4196575 4197851 + gene protein_coding_gene TRUE TRUE AT5G13180.1 ANAC083 (Arabidopsis NAC domain containing protein 83); transcription factor similar to ANAC041 (Arabidopsis NAC domain containing protein 41), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33480.1); similar to unknown [Solanum lycopersicum] (GB:CAA99760.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.903280190001675 9.89041424687549 1.12724902748469e-06 4.97702158086773e-05 13.9971158212704 22.6200317547571 0.903280190001675 0.0735662830847762 AT5G50180_at 8.08539646265438 8.01441085829006 8.5893458189246 8.2311563600424 9.22621149125112 8.97248041077167 8.05089961153999 7.73173580425662 7.31219068275989 7.65374550712065 9.12665355573105 9.06512870871427 8.40473993659575 8.5712340782877 8.74841164978753 8.81871452439676 8.69917087644788 8.48013951706089 7.76813619400937 0.153936670741652 0.154156764692898 0.153176608486346 0.157305155898036 0.150952666450668 0.157204023515517 0.155149007940054 0.160099800356342 0.173963239231179 0.159359150462392 0.153982382373658 0.154792498344900 0.166116225853578 0.164224728581851 0.161498632378230 0.156591196613252 0.155316756674882 0.162798828010401 0.165300406308633 5 0|5 /|+ 20449563 20450075 20449872 20447822 20450326 + gene protein_coding_gene TRUE TRUE AT5G50180.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G40540.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06440.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.972718906988306 9.88321591077298 1.13517906613751e-06 5.00693551662175e-05 13.9906960531716 16.5213537191369 0.972718906988306 0.0947201453345618 AT5G53030_at 4.17502499116748 4.19117701941625 5.77490318928037 6.8988151022966 6.18234169578531 5.84478183525857 4.41999021621554 4.47466019351506 3.95716337516288 3.64288374116269 4.03008609809037 4.31630692252917 4.86652055964622 5.18047277861598 3.82010302586172 4.90783051244964 5.38480023229861 4.63729179188231 3.12978593268209 0.30043172394977 0.290557324335687 0.321038991364034 0.30137997002914 0.30112307641453 0.304633040774535 0.291382362909963 0.28743488028999 0.295567806961535 0.294207134984121 0.288380933374348 0.286619844735094 0.295414402545257 0.295122279793472 0.289315343689174 0.288411064654499 0.299705551282923 0.301316126721801 0.296918105356283 5 5 + 21522701 21523139 21522893.364 21522300 21523846 + gene protein_coding_gene TRUE TRUE AT5G53030.1|AT5G53030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27810.1) 1.46315641220625 9.88191303388255 1.13662083927472e-06 5.00819993519966e-05 13.9895335518071 9.35498053362072 1.46315641220625 0.203320770620734 AT5G18190_at 8.39041681530324 8.51292075566773 9.01587398533425 9.01765107093099 9.4310408448841 9.26009142476602 8.40403161927856 8.3950040172868 8.08992105733012 8.18072053862102 9.13132916426493 9.0900466533904 9.0155813078931 8.92355281080002 8.71005785824003 9.27079037104748 8.96058973908166 9.15602453595751 8.21421551051598 0.164782219286826 0.162059746895595 0.156467320163257 0.167103017590552 0.158819037408939 0.158839456313780 0.155935257686600 0.167377873591312 0.1812723553927 0.163315964024593 0.166225035079173 0.164669261544068 0.158263502488041 0.171361255614315 0.162030491990010 0.159457367869120 0.170348574162700 0.161874071588572 0.15992508867882 5 5|0 -|/ 6010367 6011159 6010790.4 6009969 6014691 - gene protein_coding_gene TRUE TRUE AT5G18190.1|AT5G18190.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G25760.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G13670.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G03940.1); similar to putative serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD87518.1); similar to Protein kinase-like [Medicago truncatula] (GB:ABE93337.1); similar to putative casein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT44311.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.81309927459506 9.86265449357643 1.15816589618318e-06 5.09387626085698e-05 13.9723305457418 17.4003116119682 0.81309927459506 0.0364301956535426 AT5G09900_at 9.6540246571933 9.73819042319822 10.5924309032504 10.6399123020470 10.5407921198454 10.3372966092842 9.85994941785234 9.57479290964032 9.33508327913241 9.14514066071738 10.2171383156127 10.2690715778103 10.1271023267216 10.1970308970407 10.2677411134026 10.2344822310432 10.0049791421832 10.1681250655975 9.3166468290263 0.105190175494363 0.102218416945532 0.105934520475111 0.108142170486022 0.110665818814678 0.107032679021846 0.105392104540148 0.106603323340363 0.115242632405183 0.119577615383043 0.102218416945532 0.103601654450910 0.104235337413032 0.106997553791540 0.108979646956517 0.103067617748335 0.108360943559499 0.109933545114731 0.116870976521894 5 0|5 /|- 3089473 3090251 3089887.667 3089279 3092596 - gene protein_coding_gene TRUE TRUE AT5G09900.1|AT5G09900.2 EMB2107 (EMBRYO DEFECTIVE 2107) similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.1); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.2); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.8704769378434 9.86243412731918 1.15841497624599e-06 5.09387626085698e-05 13.9721334891216 19.8428398794398 0.8704769378434 0.0628888878076967 AT5G47770_at 7.88709682338755 8.16718122470853 8.57095320723573 8.79685300003962 9.04056744063875 8.60079331285984 8.06345101212393 8.03814206954645 8.51355189207711 8.18106763328941 9.97436828759631 9.99435967936449 9.29318692059111 9.60879802088476 9.84398704027709 9.57554159771244 9.01027913801843 9.77530457955953 8.44470865500999 0.163499976485320 0.157406201515598 0.161440781438918 0.157698740653039 0.157836081436822 0.164455327159091 0.160848903220495 0.158154756952037 0.186042300782853 0.156772074399287 0.157938825605419 0.157864551113171 0.159558562622528 0.160653050904425 0.158718610505500 0.153920329290278 0.165391827484116 0.162745086284420 0.159714229758158 5 5|0 +|/ 19363525 19364551 19364128.75 19362399 19364855 + gene protein_coding_gene TRUE TRUE AT5G47770.1 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase Encodes a protein with farnesyl diphosphate synthase activity. Identical to Farnesyl pyrophosphate synthetase 1, mitochondrial precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] (FPS1) [Arabidopsis Thaliana] (GB:Q09152;GB:Q42573;GB:Q8W504;GB:Q93Y84); similar to FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2), dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] (TAIR:AT4G17190.1); similar to farnesyl pyrophosphate synthase [Malus x domestica] (GB:AAM08927.1); similar to Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ] (GB:P49351); contains InterPro domain Polyprenyl synthetase; (InterPro:IPR000092); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 0.984013027813442 9.86098575301563 1.16005352169269e-06 5.09591313685127e-05 13.9708382003775 17.4027568703806 0.984013027813442 0.0984314199754344 AT5G64470_at 4.82078196987143 4.65637821133494 5.73808035378177 5.63997767195964 6.11337630651588 6.19669840443379 5.04391432415523 4.53660485439284 4.11228562876763 4.18766286573152 5.04119125348452 5.1905190129282 5.49313632688236 4.51529131206165 4.62663234553041 5.55392981623435 4.86826060938742 4.99008750110341 4.45484234720423 0.220761577716293 0.224067809487432 0.218966406195725 0.220402136135917 0.225677129673275 0.230286195654181 0.226313353898407 0.220961221716564 0.224221155436218 0.226851036906503 0.221091442610191 0.222115704506738 0.230135897862248 0.231357288024980 0.225907408989376 0.220508793845808 0.226606645251146 0.221864653915844 0.224102834863545 5 5 + 25794125 25794906 25794559.182 25793251 25795189 + gene protein_coding_gene TRUE TRUE AT5G64470.1|AT5G64470.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14530.1); similar to Os02g0117900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045691.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE84785.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.970448709600621 9.85223896008655 1.17000238191398e-06 5.13441470630462e-05 13.9630115109588 9.98646549677369 0.970448709600621 0.0949371958562574 AT5G16680_at 8.1979485141287 8.23390276126937 8.91714031856371 8.9907124466378 9.1911967418972 9.00811342809164 7.81572638380422 7.77452538395581 7.41223139012697 7.7742135039684 8.31284197247725 8.20088756213954 8.55910628135732 8.16209304244622 7.73834965752599 8.47114217777477 8.42488708693745 8.10987804765408 7.75675542053017 0.151259604279946 0.148363779473703 0.157612309312002 0.155241299208835 0.148943979286248 0.156505095832492 0.153616031582401 0.148283448554969 0.164154651270828 0.144640143432660 0.146745535572907 0.143997032131006 0.153208579342758 0.151168891409632 0.148828477199589 0.148087892313003 0.149873284955981 0.155015064649559 0.151550596977333 5 5 - 5467544 5468078 5467802.364 5467537 5473509 - gene protein_coding_gene TRUE TRUE AT5G16680.1 PHD finger family protein similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT3G02890.1); similar to PHD-finger family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97690.2); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.810464881669315 9.85035185942155 1.17216094670911e-06 5.13443297860639e-05 13.9613219328820 16.4637240806674 0.810464881669315 0.0354329532335368 AT5G08010_at 5.81238589920301 6.11960617584602 6.94054973853684 6.89288482662463 7.55896402270667 7.42093426416447 6.58317696634501 6.46443370303703 5.68459757919574 6.26726340562218 7.26172682609082 7.2871166757381 7.06099373825286 7.02819191311796 6.66761833573711 6.98916508518559 6.84711721403719 6.8316265312402 6.7058799486579 0.16378987845419 0.161363293293303 0.164788671678531 0.170151144783085 0.162484085174915 0.165893625267511 0.164851700985463 0.171555813308648 0.175403523365729 0.171265182816249 0.176985983052912 0.162164351299147 0.165792744119766 0.168481645126937 0.166449545579371 0.161531594268126 0.168826561848940 0.171918352860548 0.161323978807506 5 5 + 2571074 2571565 2571352.545 2569607 2571735 + gene protein_coding_gene TRUE TRUE AT5G08010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61040.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99007.2) 0.867940044500044 9.84984175097795 1.17274517726646e-06 5.13443297860639e-05 13.9608651572105 13.3320877084331 0.867940044500044 0.062349753133557 AT5G44020_at 10.4649229913135 10.4599939499910 10.6999609804171 10.7884965918824 11.6017831601227 11.6739704605300 10.6662867551434 10.9690837992796 10.9770559141789 11.0182934506278 12.2428666102852 12.2759200999787 12.5808216774901 12.088059239058 12.1407521090718 12.0645382002569 11.7430307793953 12.1067141526625 11.0123192721862 0.0789047932104931 0.0770556019175391 0.0795686523816031 0.0825679294836187 0.0773807521217833 0.0765540858081108 0.0815123974023493 0.0769138437744858 0.0864215489198756 0.0773871945027246 0.0782319844812763 0.0781312705239477 0.076830285917013 0.0791189244165937 0.0834892128455604 0.0778740318363848 0.0825425193276714 0.0765540858081108 0.0787859058660507 5 5|0 +|/ 17729910 17731214 17730410.6 17729636 17731563 + gene protein_coding_gene TRUE TRUE AT5G44020.1 acid phosphatase class B family protein similar to acid phosphatase class B family protein [Arabidopsis thaliana] (TAIR:AT1G04040.1); similar to Plant acid phosphatase [Medicago truncatula] (GB:ABE84853.1); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028) 0.851881285249999 9.84913146650935 1.17355919716088e-06 5.13443297860639e-05 13.9602290915945 22.4945093715128 0.851881285249999 0.0560119714131821 AT5G17280_at 7.47021165412314 7.3415758729444 8.38766409777284 8.62049102402734 8.82647329254764 8.30660673079156 7.68669732288712 7.54438988072865 7.83037565103878 7.2409709150365 8.40040709766257 8.13708157176611 8.11558257120111 8.72407540308908 8.22203033365486 8.68528926636504 8.19329276768966 8.3043819094784 7.02780464332356 0.145157919916583 0.141047760729873 0.148304631377004 0.136974658651401 0.144170448953082 0.145935250578950 0.140221530220101 0.143370716025243 0.147994709148648 0.146446814249093 0.141990813001217 0.139411336635110 0.147490433110266 0.137370758452494 0.146362049774900 0.136434109025670 0.147967292963008 0.136225181066533 0.149143190175038 5 5 + 5686372 5686680 5686527.636 5686301 5686890 + gene protein_coding_gene TRUE TRUE AT5G17280.1 similar to oxidoreductase [Trypanosoma cruzi strain CL Brener] (GB:XP_808855.1); similar to Os09g0530900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063752.1) 1.00298699113055 9.84214205429432 1.18160218178041e-06 5.16441048812145e-05 13.9539673638265 15.8800894102677 1.00298699113055 0.104015526272612 AT5G37070_at 9.7483157320493 9.8925799111281 10.7065485822469 10.6815798233796 10.5333695332669 10.3951157149635 9.35896644550039 9.15767601659473 9.33288362957869 9.01018418641963 9.73820746790349 9.71633722648885 9.6684807008503 9.79747863957422 9.32475722504073 9.7490504346875 9.77850893194233 9.78098255132023 8.84459480172707 0.105542861378522 0.104949607241279 0.101999773914005 0.106078921160654 0.110152366849778 0.109329622220555 0.106531514388964 0.104244867497275 0.116134256621752 0.110534714686060 0.104522577821120 0.101747703825761 0.109431375188001 0.108518214491657 0.101831764713625 0.104307671529259 0.109181118993327 0.104302886558463 0.105921482482879 5 5|0 +|/ 14668340 14669341 14669014.9 14668242 14669483 + gene protein_coding_gene TRUE TRUE AT5G37070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.2); similar to Protein of unknown function, DUF538 [Medicago truncatula] (GB:ABE91533.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.835720039231798 9.8403044253077 1.18372672952067e-06 5.16698665683885e-05 13.9523202553194 19.4376587714584 0.835720039231798 0.0492727526304821 AT5G05950_at 7.38396780772088 7.62308413619252 8.13987615463612 8.02117513996564 8.82397123953682 8.28658456885737 6.44923676754463 7.29250738103274 6.11863596652571 5.70833707949834 7.68619656085709 7.76836827486616 7.92194020450434 7.51047023966269 7.50674108569264 7.69242337018105 7.10590984740104 7.36369602887396 6.26049511313127 0.218337119078930 0.20472849556862 0.218865925440488 0.210849586302764 0.218029025369784 0.232059504320926 0.214303506084112 0.223849734194937 0.227533719870941 0.218253541753700 0.20472849556862 0.213001635650959 0.205881485062240 0.215978105216524 0.209405887901644 0.209583490898028 0.232471074968381 0.211557980853897 0.208603974248295 5 5 + 1788817 1789290 1788991.364 1788768 1789439 + gene protein_coding_gene TRUE TRUE AT5G05950.1 MEE60 (maternal effect embryo arrest 60) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46890.1); similar to Os07g0240400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059264.1); similar to Os10g0178200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064246.1); similar to H0201G08.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67780.1) 1.33550745053970 9.83957166743189 1.18457505254140e-06 5.16698665683885e-05 13.9516633749587 14.5518625267142 1.33550745053970 0.179105834448448 AT5G65840_at 9.40699088676662 9.49385551893672 10.2205674021823 10.3854130146141 10.5502875113351 10.3030487760487 10.3744053571426 10.3500918911120 9.4574691355258 9.77855917541435 10.6430410724830 10.5306124711098 10.8842153689172 10.7914351673461 10.6929648904774 10.8717114531744 11.0318457304019 10.8155413030194 9.41547492284253 0.0845713659770964 0.0822485226970511 0.0920098723071996 0.085193313562607 0.0816212016159116 0.0931735817922823 0.0840118895709766 0.0861518393748031 0.097615500038224 0.0920789353914536 0.087473620872128 0.0827686274685517 0.0834292006995572 0.0836880308251804 0.0948745276750573 0.0818272040655342 0.0887352532552415 0.0829394376975795 0.0908860267166403 5 5|0 -|/ 26362609 26363222 26363023.3 26360956 26363308 - gene protein_coding_gene TRUE TRUE AT5G65840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37240.1); similar to Os03g0729300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051154.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98680.1); similar to Os03g0729200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051153.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.845331558372079 9.83553940430092 1.18925507441620e-06 5.1821869320109e-05 13.9480477074092 20.3021685497891 0.845331558372079 0.0537411157105286 AT5G13680_at 5.03928089602244 5.39276990559939 6.23716431126307 6.56020989214671 6.46407027870014 5.94524291646582 4.90771556050358 4.71068768710255 4.36600707804024 4.14023237436057 5.50249353376128 5.30313847633685 5.35670308113888 4.7536880950785 5.24213400185025 5.40279370394249 5.98639163505296 5.05789253397008 4.77870449492063 0.229274936571300 0.224585390828134 0.244568625345315 0.234121730779174 0.234587186585713 0.250251555321731 0.233792489021132 0.225193757858643 0.234859622959159 0.229674453992639 0.224525856745573 0.231108813046209 0.222442356017705 0.224841551964831 0.233425813356084 0.223726252947496 0.239063241100353 0.231092006795434 0.224351966085763 5 5|0 -|/ 4410548 4411698 4410921.778 4410364 4415474 - gene protein_coding_gene TRUE TRUE AT5G13680.1 ABO1/ELO2 (ABA-OVERLY SENSITIVE 1); transcriptional elongation regulator A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. similar to putative IkappaB kinase complex-associated protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20879.1); similar to Os07g0563700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059998.1); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain IKI3; (InterPro:IPR006849) 1.09319903543560 9.82584432175331 1.20058993987590e-06 5.22632609493801e-05 13.9393477094671 10.5341271968497 1.09319903543560 0.126852107254057 AT5G44080_at 5.85197685453501 5.98670649983008 6.40265002187669 6.6750467980405 7.39870737235564 7.28122686789372 6.03968556227868 5.83686555383371 5.53942408809601 6.25711748813891 6.6613449816508 6.96079057826605 6.73031960535379 6.96381874088919 6.25562364497503 6.7819841550112 6.13287183435354 6.86124040309914 5.98299579285901 0.203417894143647 0.196988931389578 0.207559212047694 0.214047986326497 0.215470927000999 0.216946161521055 0.198221662407411 0.212560961769105 0.209037174114973 0.202178804952915 0.196846647883454 0.199207165089479 0.202831211580438 0.204778493843540 0.211456323420580 0.196846647883454 0.211217650184002 0.209322994536875 0.203460828020182 5 5 - 17756021 17756493 17756259.091 17755879 17757098 - gene protein_coding_gene TRUE TRUE AT5G44080.1 bZIP transcription factor family protein similar to GBF4 (G-box binding factor 4), transcription factor [Arabidopsis thaliana] (TAIR:AT1G03970.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE83168.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.876292967003731 9.82026670847561 1.20716400942606e-06 5.24967312917111e-05 13.9343383638411 12.7316140409877 0.876292967003731 0.0664155089821639 AT5G24750_at 3.50524321495785 3.34023801880796 3.91138161428133 4.29510072179389 4.07565073597262 4.33135897638994 3.52094731584705 3.57620447369390 2.99796604709350 3.57787733758923 4.81640514132674 4.06902388039217 4.21770220766466 3.97057386644088 4.46823159285033 4.3968081995962 4.63668692460326 5.02116318011042 3.17483268817895 0.204031997939362 0.210897989642120 0.210520048551617 0.208486778559232 0.20812959396665 0.212101893381571 0.215971864180917 0.204031997939362 0.222486019411372 0.204031997939362 0.205390289661033 0.206272459116885 0.211082228341830 0.224322220171593 0.212883637982665 0.208499380065505 0.216612809543679 0.213341057954936 0.210677712887563 5 5|0 -|/ 8490746 8491934 8491250 8490575 8494590 - gene protein_coding_gene TRUE TRUE AT5G24750.1 similar to UDP-glucose:sterol glucosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G43620.3); similar to Os02g0210800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046269.1); similar to glucosyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] (GB:NP_639206.1); contains domain UDP-Glycosyltransferase/glycogen phosphorylase (SSF53756); contains domain no description (G3D.3.40.50.2000) 0.93353188639264 9.81573486283839 1.21253424793811e-06 5.26774344261188e-05 13.9302659741630 7.66941549983989 0.93353188639264 0.0852910450475942 AT5G62290_at 5.48699318906578 5.63829926408154 6.50619737983146 6.71249873516887 6.65138120233421 6.86804422309588 6.311911887384 6.03605879854546 4.24841417797824 4.46039407990132 5.24826332604642 5.22587932199711 5.49617029496914 5.37970584517461 5.45626509096298 5.81927143606059 5.75980678049397 5.38642470285554 4.75044096197446 0.207154660912897 0.202108269031476 0.203243186185109 0.208514549733917 0.206401784464967 0.216804744784692 0.197563920138839 0.198641568496936 0.201715772069110 0.21219143449334 0.198938365614157 0.202349714596908 0.197563920138839 0.204072695631594 0.206044256389768 0.202570419926909 0.207073686756633 0.199536026254888 0.209246018902847 5 0|5 /|+ 25037095 25038001 25037543.625 25036713 25038357 + gene protein_coding_gene TRUE TRUE AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein similar to Os10g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064231.1); similar to Os03g0249300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049559.1); similar to Unknown protein [Oryza sativa] (GB:AAM01023.1); contains InterPro domain Nucleotide-sensitive chloride conductance regulator; (InterPro:IPR003521) 0.900635771770224 9.80981284433602 1.21959095088975e-06 5.29224747266838e-05 13.9249412898032 11.2553679631574 0.900635771770224 0.0751327478063773 AT5G08320_at 5.99658989402076 6.46241048074733 6.55854109162368 6.73188033581513 7.52855090082951 7.0844034105735 5.928566748952 6.11532482268019 5.54022901647857 5.82512001123531 7.22053976572412 7.26824961366336 6.7724608254654 7.15261183434487 6.42759243393043 6.87448119775218 6.87532834300248 6.78364058762426 5.58035714473460 0.206479061679152 0.209622307936242 0.216532269490540 0.223413260744595 0.212870290360394 0.216439025101097 0.206944764330467 0.219633201339698 0.226705243157593 0.223678357458385 0.216446281248724 0.204278444596062 0.216548376455177 0.209882977846771 0.220431195096392 0.210589069883558 0.210884379910798 0.207797927950143 0.221735731346813 5 5|0 +|/ 2677157 2678579 2678042 2677053 2678679 + gene protein_coding_gene TRUE TRUE AT5G08320.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25105.1); contains domain gb def: Hypothetical protein F8L15_50 (PTHR15967:SF3); contains domain FAMILY NOT NAMED (PTHR15967) 1.06170764957464 9.80708292987777 1.22285892492929e-06 5.29224747266838e-05 13.9224855634251 12.8359993603242 1.06170764957464 0.119793443794967 AT5G19920_at 2.58132882056694 2.42954095541064 3.75156282033620 3.51166392673893 2.86573958965996 3.48020265829092 2.26357507873987 2.12124961771759 1.87775300992847 2.18513162241274 3.39720717534868 3.42649596597198 2.64669731573963 2.88070685138974 3.63265062609895 2.98736061809684 3.46049741678801 2.93802015704964 2.24322288992852 0.226824809566818 0.227873771864854 0.239255734516148 0.233102907614996 0.236416605002396 0.235648063532366 0.235891392355937 0.237616038924874 0.232391650571154 0.235439384400944 0.232811874257946 0.231043021401138 0.233108335491835 0.245896557663259 0.244556271027594 0.231933796136001 0.236189693611997 0.240525118417006 0.240052363088239 5 5|0 -|/ 6733650 6734226 6733886.7 6733218 6737375 - gene protein_coding_gene TRUE TRUE AT5G19920.1 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G50970.1); similar to WD40-like [Medicago truncatula] (GB:ABE80202.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.0612686528508 9.8066683946143 1.22335599457005e-06 5.29224747266838e-05 13.9221125988423 5.51222811171614 1.0612686528508 0.119697350544720 AT5G46350_at 3.05581510082542 3.45410906519551 4.54683647412851 4.86063893675832 3.78543262490761 3.86185261318402 1.65239594221882 1.45956621476098 1.91280968487631 2.99907827642272 2.1605599027803 2.53614445598331 2.56579261099131 2.88216030402178 2.01597573792858 2.35205324888044 2.37051446561378 2.41261063967477 2.10572753447354 0.257987339722172 0.26877732467448 0.273327979124746 0.282720677017493 0.264412073373412 0.262321044778888 0.258334001736143 0.253684091902264 0.259527400892356 0.253684091902264 0.253684091902264 0.253684091902264 0.26037482050748 0.257922045073906 0.259964682229973 0.255912249836629 0.276010952675679 0.260874661665156 0.257714784002488 5 5 - 18818713 18819775 18818920.636 18818445 18821270 - gene protein_coding_gene TRUE TRUE AT5G46350.1 WRKY8 (WRKY DNA-binding protein 8); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 8 (WRKY DNA-binding protein 8) (WRKY8) [Arabidopsis Thaliana] (GB:Q9FL26); similar to WRKY28 (WRKY DNA-binding protein 28), transcription factor [Arabidopsis thaliana] (TAIR:AT4G18170.1); similar to Os01g0626400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043628.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE87685.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.965494918485598 9.80666728065742 1.22335733061219e-06 5.29224747266838e-05 13.922111596573 5.7101716644933 0.965494918485598 0.094807012572839 AT5G46030_at 9.58377173031229 9.57989794025787 10.6415007217298 10.5720800542800 10.8005452240706 10.5579591953702 9.87782284899208 9.4680610507539 9.63636216851618 9.43202638057085 10.5273374066192 10.2976625843804 10.2398302961860 10.2042625611141 10.2033707215327 10.4417047598325 10.1449286651038 10.2767558357569 9.2986596038137 0.117928600916728 0.113361695749803 0.109199540253192 0.106298094578755 0.109472664359504 0.111011933806689 0.108200666059205 0.110711075900867 0.122099737502457 0.110873506213950 0.108138397623939 0.108192234668483 0.106764777058750 0.124256515225876 0.109857713762505 0.108258745678476 0.108976422415011 0.108475765273013 0.117684442094822 5 5|0 +|/ 18687773 18688324 18687970.556 18687344 18688600 + gene protein_coding_gene TRUE TRUE AT5G46030.1 Identical to Transcription elongation factor 1 homolog [Arabidopsis Thaliana] (GB:Q8LEF3;GB:Q9FNL9); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69422.1); similar to Os07g0631100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060360.1); similar to Os02g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045811.1); contains InterPro domain Protein of unknown function DUF701, zinc-binding putative; (InterPro:IPR007808) 0.925965896232867 9.80590022406372 1.22427768832899e-06 5.29224747266838e-05 13.921421417443 20.0090370064455 0.925965896232867 0.0832799292616876 AT5G19550_at 9.9510296266349 9.86279331733318 10.8349573435814 10.7732920445161 10.3141292489795 10.0765307377600 9.64828765254797 9.66204420215918 9.17168804406112 9.26304007891386 9.93858955664585 10.0659870399743 9.84557485183432 9.98158248806418 10.0343909809142 9.87603680476676 9.9700415570093 9.97027680994533 8.65680389429982 0.100891609957535 0.101102395102895 0.104210426188372 0.102319767249771 0.107368869182715 0.104127712618336 0.103019395537438 0.101242117731774 0.109100785511765 0.106342390046346 0.101496764742456 0.098757695892826 0.100984862968181 0.098757695892826 0.099843433310283 0.098757695892826 0.102611524959030 0.102977321195671 0.113895161843685 5 5|0 +|/ 6600061 6601566 6600697.1 6598019 6601821 + gene protein_coding_gene TRUE TRUE AT5G19550.1 ASP2 (ASPARTATE AMINOTRANSFERASE 2) Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. Identical to Aspartate aminotransferase, cytoplasmic isozyme 1 (EC 2.6.1.1) (Transaminase A) (ASP2) [Arabidopsis Thaliana] (GB:P46645); similar to ASP4 (ASPARTATE AMINOTRANSFERASE 4), catalytic/ transaminase/ transferase, transferring nitrogenous groups [Arabidopsis thaliana] (TAIR:AT1G62800.2); similar to ASP3 (ASPARTATE AMINOTRANSFERASE 3) [Arabidopsis thaliana] (TAIR:AT5G11520.1); similar to aspartate aminotransferase (GB:AAA79370.1); similar to aspartate aminotransferase glyoxysomal isozyme AAT1 precursor [Glycine max] (GB:AAC50014.1); similar to aspartate aminotransferase cytosolic isozyme AAT2 [Glycine max] (GB:AAC50015.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.82424399137989 9.8044582691147 1.22600986159501e-06 5.29445660546073e-05 13.9201238231622 19.6357933634736 0.82424399137989 0.0452035711294821 AT5G12430_at 6.53346347442154 6.67653452770434 7.46002755200916 7.76480079767984 8.5292150051173 7.72868557067151 7.22949992131164 7.00736560037617 6.69247967138635 6.18281876100886 7.82887834835585 8.07263134187661 7.77744653146507 7.97060754396902 7.87113731509241 7.77366914908254 7.47272480716948 8.27883201205656 6.50239380570848 0.220105750008915 0.203350188018153 0.204783320794941 0.202739304040119 0.209307856385986 0.205868197022264 0.20200891357365 0.205581696442860 0.206412675171653 0.209759364533184 0.2062225061746 0.202545811263311 0.212640173221982 0.211781107794694 0.209249146641152 0.20200891357365 0.215053485099494 0.20200891357365 0.208455791031588 5 5|0 -|/ 4028507 4029626 4029130 4027980 4034087 - gene protein_coding_gene TRUE TRUE AT5G12430.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G41520.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81123.1); similar to Os01g0273500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042715.1); similar to Os05g0374600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055374.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.21523824275746 9.79508710961247 1.23733213719007e-06 5.33803446663959e-05 13.9116858307031 14.5361848697454 1.21523824275746 0.155127564522097 AT5G43820_at 3.98170483502571 4.05854551004171 5.03435080046273 5.18855163742801 5.38052994020951 5.08928576285996 4.18819667789815 3.7018687948471 4.06550223708522 3.63869225914725 4.5275394488157 4.68815086212708 4.71197859067428 4.89455097185547 4.51998654921105 4.91480253071492 5.37481920814636 4.86584020949917 4.35192670989858 0.214921526778591 0.212279037648992 0.222465274220054 0.224850944153413 0.220493921957539 0.224218315223741 0.218014488817668 0.226502360719742 0.229070088755643 0.220039634906520 0.213025492659767 0.212279037648992 0.217088357648373 0.216037646908301 0.214786865852698 0.215298878739229 0.227539395299498 0.222187429189776 0.215041816880092 5 5|0 +|/ 17637661 17638908 17638386.7 17636175 17639095 + gene protein_coding_gene TRUE TRUE AT5G43820.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G15010.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE81252.1); similar to Os03g0761300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051352.1); similar to Os02g0304800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046632.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.992051029228522 9.7896673656577 1.24393204348256e-06 5.36117294140809e-05 13.9068018012902 8.99333705239204 0.992051029228522 0.102529648068638 AT5G20570_at 9.61813178368025 9.8937260227085 10.5345586055115 10.4829746544083 10.7418412103974 10.5012897266336 9.7115650352271 9.66513832007086 9.1712976797045 9.37774282341388 10.2496913791965 10.1468160677922 10.2266428865247 10.3006782295573 10.1727786897536 10.0619061410240 10.1441507568476 10.1523337297372 9.31741887285967 0.0998336354812117 0.0934537661721517 0.0991379704848784 0.091073862883355 0.0919547808567014 0.0999072976973255 0.091073862883355 0.0981218059353192 0.102472517708172 0.0933784448247438 0.100427632262927 0.0922733919795532 0.094202359928415 0.0991239960254881 0.0923910975960114 0.0946826163630281 0.0951544749558304 0.0933792096635884 0.0943768420914577 5 5|0 -|/ 6957038 6958189 6957773 6956662 6958313 - gene protein_coding_gene TRUE TRUE AT5G20570.1 RBX1 (RING-BOX 1) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. Identical to RING-box protein 1a (RBX1a-At) (At-Rbx1;1) (RBX1-2) (RBX1A) [Arabidopsis Thaliana] (GB:Q940X7); similar to ring-box protein Roc1/Rbx1/Hrt1, putative [Arabidopsis thaliana] (TAIR:AT3G42830.1); similar to RING-box protein [Arachis hypogaea] (GB:ABC41134.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.868040350938734 9.7882048464097 1.24571956790816e-06 5.36354536537749e-05 13.9054833451440 19.8790004333531 0.868040350938734 0.0644343530069083 AT5G54540_at 11.1006542863499 11.2665750492579 11.8851747852555 11.9368059812346 12.0478839299273 11.9436703960789 11.2648400789742 11.1175729388566 10.7212586289610 10.8183520590222 11.8112787702008 11.5752223550212 11.4752608489623 11.548785375548 11.6328700406601 11.6233399300283 11.7113348567194 11.5948183053533 10.7096546081860 0.0738738669041375 0.071281390957482 0.0722232449416476 0.071281390957482 0.0735122808079861 0.0752397534579927 0.071281390957482 0.0721952081186802 0.0838085680212562 0.0755473029145790 0.0735758227901794 0.071466224405745 0.0780329854801006 0.0747340730140 0.071281390957482 0.071281390957482 0.078908798854891 0.071613079770736 0.075478712295976 5 5|0 +|/ 22174350 22175041 22174731.222 22173724 22175280 + gene protein_coding_gene TRUE TRUE AT5G54540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25170.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94497.1); similar to Os08g0179900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061135.1) 0.818915948176523 9.7841758182472 1.25065837006463e-06 5.37946770040718e-05 13.9018500911685 22.7560816352593 0.818915948176523 0.0433478793188809 AT5G53140_at 7.63070367559046 7.5905050985921 8.53476635128452 8.53905726656662 8.50191334364291 8.17101926242523 8.1239013576426 8.50760323014975 7.62570564736087 7.78910675519478 9.2669820738311 9.1748205928329 9.28929661588796 8.97330332667259 9.23270358100407 9.0565137292449 8.87301313802013 8.67808082217297 7.57752048990237 0.145176179152875 0.149053817602243 0.146260005058708 0.139165990577082 0.137299982175533 0.147921022051629 0.142198112493821 0.143674802582175 0.154350519472336 0.148854476352453 0.147371448374912 0.143721572425793 0.141164380738347 0.1490839227435 0.148742772413729 0.144108808133745 0.148387793591591 0.137801587259354 0.145067130183274 5 5 + 21568154 21569287 21569004.364 21565699 21569696 + gene protein_coding_gene TRUE TRUE AT5G53140.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT5G10740.1); similar to Os02g0255100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046461.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:BAD46120.1); similar to Os05g0587100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056467.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.938744493145876 9.7764939081567 1.26013386914236e-06 5.41485286897266e-05 13.8949183102776 16.5660337977923 0.938744493145876 0.0879608712607956 AT5G53650_at 6.90686702977896 7.23418916910678 7.65088932403715 7.6954465216596 7.82815338568227 7.39828812549683 6.60099980670117 6.78239156522123 6.11650167343261 5.83366871662669 7.6088991200072 7.85831500705041 6.84566598419533 7.06704712858283 7.39078639988296 7.36106383604965 7.10409215799255 6.9147092508466 6.28039876807884 0.212263603027281 0.203062236814755 0.210103214299028 0.205746474839955 0.20675138867672 0.209052822606977 0.203306359065723 0.204876476676061 0.217118636944240 0.203062236814755 0.216296718245465 0.206634149712462 0.215891872918207 0.219409917937065 0.213846301676145 0.203482736116693 0.210606420939044 0.212069000594139 0.220645833735089 5 5|0 +|/ 21808507 21809443 21809065.1 21808403 21809667 + gene protein_coding_gene TRUE TRUE AT5G53650.1 similar to Os05g0535700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056158.1) 0.977024210523413 9.77267526663245 1.26487305728258e-06 5.42983597381815e-05 13.8914703708273 13.9349924892715 0.977024210523413 0.0989310148085784 AT5G20280_at 10.1333793588456 10.4480644640567 11.1225756059249 11.3706312747038 11.1627610505565 10.9297234477745 10.5004538515801 10.2901353970773 8.94178789387822 9.58751790247553 10.1855534838425 10.0927145267533 10.1738074172547 10.0507557938643 9.96277763572635 10.3386850428394 10.8110757129451 10.6804496681383 9.11049369120836 0.118683382217990 0.115758675105526 0.117580928301848 0.121133161402818 0.118842703532847 0.11934107656647 0.119308576387836 0.118790322720167 0.140196180170515 0.123479473607209 0.123603188922459 0.115758675105526 0.116949931196038 0.125860817820112 0.123102894296090 0.116488948671158 0.119460998921519 0.119407299609327 0.13161603531174 5 5|0 -|/ 6845021 6845733 6845384.444 6844716 6850156 - gene protein_coding_gene TRUE TRUE AT5G20280.1 ATSPS1F (sucrose phosphate synthase 1F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups Encodes a protein with putative sucrose-phosphate synthase activity. similar to ATSPS3F (sucrose phosphate synthase 3F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G04920.1); similar to ATSPS2F (sucrose phosphate synthase 2F), sucrose-phosphate synthase [Arabidopsis thaliana] (TAIR:AT5G11110.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to sucrose-6-phosphate synthase A [Nicotiana tabacum] (GB:AAF06792.1); similar to Sucrose-phosphate synthase 1 (UDP-glucose-fructose-phosphate glucosyltransferase 1) (GB:O22060); similar to sucrose phosphate synthase [Actinidia chinensis] (GB:AAL86360.1); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria; (InterPro:IPR006380); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296); contains InterPro domain Sucrose phosphate synthase, plant; (InterPro:IPR012819) 0.938562745583237 9.77012511025614 1.26804873957349e-06 5.4380842730675e-05 13.8891669677868 20.4948375093272 0.938562745583237 0.0880878339033393 AT5G40170_at 9.62068614095954 9.93563771419294 10.7237903454728 10.8361811742926 10.9327826286439 10.6525535623905 9.61583060634813 9.5372976271694 9.31311240642323 9.54428746936835 10.0606350707038 10.2204888400807 10.2102619976663 10.3249165391299 9.72946057809821 10.2722669633689 10.1102749078492 10.1628907782822 9.46987901354094 0.103481943137367 0.101054864599106 0.107568565346904 0.103763358575921 0.105736760125182 0.109418939505126 0.103816302708888 0.104412736686575 0.113215831750009 0.105637241551239 0.110766021815959 0.101054864599106 0.101054864599106 0.102696949713434 0.108551385448328 0.104265506167092 0.109000813124918 0.106453340752505 0.108217736472093 5 5 - 16082433 16082982 16082662.545 16082319 16084802 - gene protein_coding_gene TRUE TRUE AT5G40170.1 disease resistance family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33060.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33050.1); similar to putative kinase [Brassica napus] (GB:ABI99471.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.901468534242842 9.7663541389127 1.27276055566155e-06 5.45289754081376e-05 13.8857596894356 20.0212578528545 0.901468534242842 0.0767165105441132 AT5G22875_at 6.53186006259419 6.39648382565987 7.53969074430033 7.70064999653855 8.71010252642186 7.68203772542009 6.10456875611374 6.3352681696075 6.81493118386138 6.39664968872954 7.97668145835552 7.91514013438453 7.9892054309882 8.20391534296595 7.36986162738317 7.80184810738855 6.94626947365497 7.54934787675926 6.49382813117555 0.223239778576855 0.2257536101171 0.224204649485623 0.224311679545268 0.243247996665846 0.221504611172192 0.227364638098140 0.224090473701437 0.228074540734303 0.225480103863399 0.223152784904499 0.223706244780486 0.218003130197991 0.232146165274288 0.231380752214138 0.229707750934948 0.224752674139953 0.218003130197991 0.223872633400337 5 5|0 +|/ 7651324 7651576 7651474.778 7650585 7651779 + gene protein_coding_gene TRUE TRUE AT5G22875.1|AT5G22875.2 similar to Os04g0165500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052133.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79573.1) 1.35831952911962 9.76115112162099 1.27929292455138e-06 5.4754736704614e-05 13.8810561541218 14.2688344005356 1.35831952911962 0.185933047564386 AT5G01290_at 4.76080107574075 4.68242884162548 5.70612674922294 5.65054178991921 5.82941047315852 5.39620777715492 4.97123619401643 4.98303473075916 4.75161713990286 4.5309027482539 5.76758643074764 5.95529735920722 5.77457919977027 5.65224085448533 5.90704609821919 5.82658649940938 5.13398923536429 5.47088758424178 4.76279125233445 0.223202648467662 0.215310575447484 0.221180485403655 0.216632124165361 0.230587557981712 0.220280428935136 0.221988744548855 0.223250849268154 0.243335333027092 0.220687863813375 0.224352061470345 0.219503565562649 0.215310575447484 0.224716703191914 0.215310575447484 0.224420533195990 0.222459732740805 0.219481572324617 0.217492739331766 5 5 + 120465 121341 120933.1 117306 121568 + gene protein_coding_gene TRUE TRUE AT5G01290.1 mRNA guanylyltransferase similar to mRNA capping enzyme family protein [Arabidopsis thaliana] (TAIR:AT3G09100.2); similar to mRNA capping enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G28210.1); similar to mRNA capping enzyme, C-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96062.1); similar to mRNA capping enzyme, C-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92070.1); similar to Os12g0193200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066345.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387); contains InterPro domain mRNA capping enzyme; (InterPro:IPR001339) 0.90022638217267 9.74956965254114 1.29396440488026e-06 5.53280694907372e-05 13.8705767993001 10.4313719728719 0.90022638217267 0.07681671697916 AT5G42380_at 1.85070615718265 1.75724928247613 4.11877731931793 4.14002434046678 2.27752268260896 2.20322442999418 1.10268169254154 0.552841493685976 0.97828460567765 1.19195793549142 1.07050404977282 1.29255508719501 1.23824149000010 1.2235380168844 1.10173655149735 0.94854152196986 0.890322831703776 1.56314560595213 1.12008552323777 0.249852113278728 0.249105038760229 0.279725357406011 0.280213607823863 0.250524349423122 0.258299694582905 0.243549274653553 0.243549274653553 0.251639783915625 0.243862788121083 0.246496187583480 0.243549274653553 0.247002553372912 0.24745028364453 0.243549274653553 0.243549274653553 0.246907908616717 0.246364462965391 0.243748215068673 5 5 - 16960009 16960500 16960221.364 16959804 16960594 - gene protein_coding_gene TRUE TRUE AT5G42380.1 calmodulin-related protein, putative similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G76650.1); similar to regulator of gene silencing [Lycopersicon esculentum] (GB:AAT65969.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.969157329764187 9.74814403655445 1.29578296725853e-06 5.53512415968975e-05 13.8692859225348 3.38180300770470 0.969157329764187 0.0974391654030028 AT5G12140_at 10.4134110335227 10.6208053826601 11.1351444172223 11.327048108345 11.4887946816027 11.1052419937064 10.80194104545 10.9208414087944 10.2079101363127 10.3377536326356 11.5859433956220 11.6914528247371 11.4688649318278 11.5259388997703 11.3501375483178 11.5622704743034 11.5103901960602 11.5058599536823 10.1990541594063 0.0916726578763427 0.0876211494031384 0.093175299696575 0.0902521138025685 0.0900591811183407 0.0959894140710162 0.0891935340649943 0.0896993190173339 0.0949573158378016 0.0885192365150732 0.0876438975083633 0.0888805415485421 0.0876211494031384 0.0922828377775202 0.0923575854553533 0.0876211494031384 0.0949319331271126 0.0906770095776904 0.0897496762770502 5 5|0 -|/ 3923296 3923902 3923564.4 3922910 3924024 - gene protein_coding_gene TRUE TRUE AT5G12140.1 ATCYS1 (A. THALIANA CYSTATIN-1); cysteine protease inhibitor Encodes a cystatin. similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.1); similar to phytocystatin [Brassica rapa subsp. pekinensis] (GB:AAQ03209.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 0.92583777560043 9.7459275042633 1.29861595844131e-06 5.54176582303228e-05 13.8672784783177 21.8633268026588 0.92583777560043 0.0849713208425666 AT5G37830_at 8.11258194815643 8.15074446519345 8.79373465050974 8.8922100079219 9.05986305670194 8.58612867514527 7.4542533126418 7.76614755237493 7.27911833572573 7.32215487729595 8.42431094437847 8.49671095548342 8.41503451914263 8.38387199000856 8.45911935864668 8.4074914675742 8.15108457656304 8.16984867067 7.51197563985094 0.165901806274056 0.161961678801669 0.165613184413708 0.173578189428208 0.160388097466934 0.174003128847727 0.162245083121531 0.156750333293442 0.167125589258951 0.162895473817094 0.160932129776705 0.151641916052604 0.152393084320253 0.164271455680589 0.157406687448703 0.150651493549913 0.176307051835916 0.164861818448791 0.165133544087812 5 5 - 15073890 15074513 15074245.727 15073418 15078007 - gene protein_coding_gene TRUE TRUE AT5G37830.1 hydantoinase/oxoprolinase family protein similar to Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal [Medicago truncatula] (GB:ABE93080.1); similar to putative 5-oxoprolinase [Oryza sativa (japonica cultivar-group)] (GB:BAC05619.1); similar to 5-oxoprolinase (ATP-hydrolysing) [Rattus norve (GB:NP_446356.1); contains InterPro domain Hydantoinaseoxoprolinase, N-terminal; (InterPro:IPR008040); contains InterPro domain Hydantoinase B/oxoprolinase; (InterPro:IPR003692); contains InterPro domain Hydantoinase/oxoprolinase; (InterPro:IPR002821) 0.977201693664445 9.74116368776617 1.30472745088950e-06 5.562371475937e-05 13.8629623775406 16.2192164642136 0.977201693664445 0.0998416015010595 AT5G59420_at 9.89404821555635 10.018288726952 10.851484659971 10.7526404106896 10.8111878557644 10.8727438838230 9.51938930750424 9.6605830616844 9.70610484241321 9.42481717762892 10.1129344406384 9.94515810782286 10.1586492511392 10.1009660328669 9.83711803894743 10.1224944263175 10.1625934758789 10.1208593268233 9.39013030605624 0.0827295380494071 0.0839175591910776 0.0832221547504973 0.0856692080287628 0.0845434281390489 0.0845539652362562 0.0842597941684067 0.08166453696201 0.0897529016520111 0.0862517197285156 0.0811111826392892 0.0840387170215651 0.0850569248602825 0.0827897610520669 0.079734454161736 0.0815449740549777 0.0889274585952596 0.0837522767174079 0.086952289756525 5 0|5 /|+ 23980971 23981762 23981337.3 23978801 23982050 + gene protein_coding_gene TRUE TRUE AT5G59420.1 oxysterol-binding family protein similar to UNE18 (unfertilized embryo sac 18), oxysterol binding [Arabidopsis thaliana] (TAIR:AT5G02100.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT3G09300.1); similar to Os03g0274000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049701.1); similar to oxysterol-binding protein [Solanum tuberosum] (GB:AAR25799.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain C2; (InterPro:IPR000008) 0.806008035079628 9.73927569792981 1.30715817870641e-06 5.56726006303142e-05 13.8612511984288 20.0861028050367 0.806008035079628 0.0382801888500385 AT5G20680_at 5.36518633590867 5.54770911227492 6.27745501880349 6.74361615785196 6.96749849166197 6.73099311737095 5.85585826164899 6.12608429323443 5.29658359980554 5.24485524256629 6.08229517168476 6.07862482998271 6.44677947398134 6.43496515753675 6.35937295428084 6.49652989481296 6.49937703388973 6.03534453397361 5.22773954036499 0.2037018071146 0.2037018071146 0.208728650660046 0.204359649547493 0.208366297010138 0.206542432222844 0.208120958785960 0.203755568752862 0.209120769802876 0.212357121802687 0.207558492122868 0.204619282226224 0.2037018071146 0.207944944233341 0.217531068273676 0.205718729089343 0.227874459353881 0.206494310922474 0.212483419086325 5 5 + 7001032 7001549 7001333 6998105 7001912 + gene protein_coding_gene TRUE TRUE AT5G20680.1|AT5G20680.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64020.1); similar to Os11g0241900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067587.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA92327.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 1.00197476633879 9.735526572802 1.31199963896315e-06 5.58239642404589e-05 13.8578521234796 11.9820770613511 1.00197476633879 0.106618762324422 AT5G57900_at 7.88530692386522 7.76536260902213 8.40994740275536 8.39861335366944 8.71414424668774 8.45401026017471 7.37514727587455 7.59726401034537 6.89437244397279 7.17407258987892 7.68210445592807 7.58777406772108 7.9475299858067 7.54510126754319 7.59128201161989 7.920224315154 8.31362069960957 8.16754807661622 6.82785318578237 0.154670303184665 0.150783759101772 0.149197226522682 0.151846289097636 0.157827886570807 0.151553085938222 0.147517380282289 0.155364400633183 0.161618596270861 0.167363900095411 0.150723636104707 0.151195101742415 0.145925357004033 0.150845815842924 0.148903472302267 0.146850936946634 0.153773900989800 0.152762698258367 0.148203398112690 5 0|5 /|- 23467198 23467659 23467423 23466937 23468159 - gene protein_coding_gene TRUE TRUE AT5G57900.1 SKIP1 (SKP1 INTERACTING PARTNER 1) F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner similar to F-box family protein (FBL19) [Arabidopsis thaliana] (TAIR:AT4G30640.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE78800.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.858686990583404 9.7326916297568 1.31567348140443e-06 5.59253990698052e-05 13.8552809415152 15.4798899352382 0.858686990583404 0.0627596127064925 AT5G13810_at 9.52167751141142 10.0356741315146 10.9297775333426 11.0709168166180 11.0336043774202 10.9156927819694 10.1887442335052 10.3335204564946 10.1081857065066 9.9697200601827 11.1659243599422 10.8264180953971 10.8471792923074 11.0534533934522 10.7123731194302 11.1571612506356 10.8766061717487 11.0660487238099 9.90446245989954 0.0948238048887327 0.09004063544746 0.0921286301919616 0.0957818994771225 0.089735426871478 0.0927376341469911 0.0926617389499396 0.0893672362350845 0.0975576761128471 0.093283610722814 0.0893672362350845 0.089746504843285 0.0911371153967376 0.0928034917310352 0.0911724021336546 0.0893672362350845 0.0996855601311139 0.0917234555183775 0.0899094261033659 5 5 + 4456004 4456567 4456240.182 4455336 4457022 + gene protein_coding_gene TRUE TRUE AT5G13810.1 glutaredoxin family protein similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT3G57070.1); similar to Thioredoxin fold [Medicago truncatula] (GB:ABE87618.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.968308301375095 9.72876753903734 1.32077719581948e-06 5.60873553127577e-05 13.8517206186031 20.9823351268028 0.968308301375095 0.0977377629972003 AT5G14700_at 3.28192910319428 3.86643359820777 4.20811646956079 4.17620539551494 5.0161684596007 4.58922877312075 3.32061197768467 2.76048076807392 2.89581335459263 2.7163645591514 4.41592185224628 5.31467378528396 3.61940423486364 4.12442564545856 4.30013646684003 3.40832763904013 2.99265778076083 4.42267343736114 2.84841838070251 0.230999499197696 0.226696291454046 0.233614587404221 0.222672788410992 0.225890256360192 0.242230963319626 0.222672788410992 0.239715617324653 0.237604691304604 0.228666115020286 0.224011247914228 0.222672788410992 0.224948580224973 0.232597777196121 0.227654809945289 0.222672788410992 0.245794070565722 0.224049347861099 0.229676559596865 5 5 - 4740673 4741375 4741118.182 4740255 4743449 - gene protein_coding_gene TRUE TRUE AT5G14700.1 cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase-related [Arabidopsis thaliana] (TAIR:AT4G30470.1); similar to Os01g0639200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043674.1); similar to Os05g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056413.1); similar to cinnamoyl CoA reductase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD68587.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 1.22232237653772 9.72727660524952 1.32272194811819e-06 5.60984114784949e-05 13.8503674921083 7.34988500314339 1.22232237653772 0.158483333491413 AT5G58740_at 9.9581502004688 9.96759665285457 10.8128169172456 10.8167723319242 10.7444881368982 10.7844448210823 9.96017907458305 10.0446056916436 9.95697415965765 9.92174001103327 10.7963302427597 10.6252759292146 10.6445388377665 10.6456728561782 10.7004588473220 10.6471052952260 10.4639488643017 10.6610757673786 9.81950840673133 0.068963308415271 0.0667543105971806 0.0676454654136598 0.0683442915459439 0.0691334469940252 0.0743594379464197 0.067432930389281 0.0716675759928258 0.0709592487009604 0.0685720750758831 0.0667543105971806 0.0671004057236261 0.0695794904298592 0.070056520861022 0.0667543105971806 0.0674753841207575 0.0754865203117244 0.0678392498422778 0.0711413123787963 5 5|0 -|/ 23743168 23744540 23743923.875 23743000 23744840 - gene protein_coding_gene TRUE TRUE AT5G58740.1 nuclear movement family protein similar to nuclear movement family protein [Arabidopsis thaliana] (TAIR:AT4G27890.1); similar to Os01g0668000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043813.1); similar to hypothetical protein [Plasmodium berghei strain ANKA] (GB:XP_678068.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain CS; (InterPro:IPR007052) 0.777820475555531 9.72658487533743 1.32362528546678e-06 5.60984114784949e-05 13.8497396233478 20.6598609062505 0.777820475555531 0.0162609431937477 AT5G61340_at 5.41773308348763 6.45471962208806 7.44970068795333 7.38393210158893 8.60630898159878 8.43236360878737 7.75152329974138 7.81980413142874 5.4157568364899 6.89054535166647 7.68549777050297 7.76874592140407 7.82417823995937 7.68297177946893 7.36186073169819 8.01398997471566 7.85008682885352 7.25024356534607 6.03210984832696 0.24055248513659 0.211902552424587 0.233579692631356 0.210263111851567 0.206720685014841 0.223648337279186 0.205852870393019 0.205852870393019 0.264631376866600 0.215184572518555 0.208613246663619 0.217115585928323 0.208057283686339 0.221473211110995 0.210790059903455 0.215227837150583 0.223983746547248 0.234281293847405 0.207146552771297 5 5 - 24679426 24679789 24679626.909 24679230 24680343 - gene protein_coding_gene TRUE TRUE AT5G61340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26650.1); similar to Os12g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067114.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55692.1); similar to Os12g0507400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066845.1) 1.33701207506407 9.72177382956799 1.32992662836149e-06 5.63104330790359e-05 13.8453714122146 14.3107611214116 1.33701207506407 0.182700641050256 AT5G40520_at 5.67199242515754 5.47673505834342 6.55761001868246 6.79262310430304 7.39618143170594 6.77144356561624 5.73364131966416 5.09909921187065 3.99034442417839 4.81474278497228 5.2291226228294 5.5694930849869 5.27599953705382 5.66902754915812 5.16770204255974 5.99340038210339 5.61996786668491 5.61703981414893 4.44842982493886 0.204925001368795 0.20246320357751 0.207991446082589 0.200191591228107 0.204156789403457 0.207554980092807 0.205371829049159 0.204409056466152 0.209537904412707 0.206953713774783 0.205594717653413 0.202688238473976 0.208830974894228 0.209144266321081 0.200191591228107 0.200191591228107 0.207218450391082 0.207212041913360 0.204719193802559 5 5 - 16248911 16249594 16249312.636 16248482 16251544 - gene protein_coding_gene TRUE TRUE AT5G40520.1|AT5G40520.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07170.1); similar to hypothetical protein PF10_0257 [Plasmodium falciparum 3D7] (GB:NP_700730.1); similar to Os09g0103200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062553.1); similar to Os01g0632300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043651.1) 1.24198881369773 9.71928714864956 1.33319635080427e-06 5.63938043462957e-05 13.8431127098591 11.1551948288198 1.24198881369773 0.162919516911104 AT5G54970_at 3.14250926702827 3.96273548061839 4.58902423466161 4.7016842066101 2.07486053364709 2.18433681585947 3.30548590795023 3.98638064711640 3.25806232896017 2.81574297293041 5.9976257915148 7.63972899676359 4.35212632186323 5.31038603997209 8.18337412115096 5.06927396822237 4.24707046087221 5.517812863098 2.5333765324954 0.239813904165253 0.236154987877452 0.237351870809773 0.236202096514316 0.258095973633356 0.260807502878653 0.239923686935316 0.242340790941517 0.258463565756598 0.240643532359462 0.245613937281686 0.24983718642918 0.236154987877452 0.263645269428044 0.255764685082718 0.241208020314707 0.252981876369992 0.239562634349232 0.236808583396115 5 5 + 22330499 22330817 22330655.727 22330436 22330990 + gene protein_coding_gene TRUE TRUE AT5G54970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26960.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45481.1) 1.35440641549320 9.71404606148622 1.34011642668330e-06 5.66312714521036e-05 13.8383500949959 7.82274485263352 1.35440641549320 0.186471199384135 AT5G49500_at 3.81361860040834 3.84519809197899 5.46660306713888 4.9197616413661 5.58629783987498 4.97289991392376 3.80084699403518 3.99931272407532 3.47734477330291 4.04675060899938 4.54017664700597 5.09191833918012 5.08661942051354 5.17771947819144 4.55704736020823 4.63243276687508 5.02848889194741 4.80346292460936 4.19560457775942 0.223530612488202 0.20860346578628 0.214473113776766 0.210972017922994 0.210850559734680 0.217608716011054 0.212129585736411 0.234548948630433 0.23245867191355 0.218567435518166 0.215937395781856 0.209650125660608 0.211746206004005 0.224701771069762 0.221094495635637 0.207999535427551 0.221225965016277 0.209823194100065 0.216595248899080 5 5|0 -|/ 20094784 20095529 20095077.2 20094782 20097432 - gene protein_coding_gene TRUE TRUE AT5G49500.1 signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B) similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.1); similar to ATHSRP54A (Arabidopsis thaliana signal recognition particle 54kDa A), 7S RNA binding / GTP binding / mRNA binding [Arabidopsis thaliana] (TAIR:AT1G15310.1); similar to Signal recognition particle 54 kDa protein 2 (SRP54) (GB:P49966); similar to GTP-binding signal recognition particle SRP54, G-domain [Medicago truncatula] (GB:ABE77897.1); similar to signal recognition particle 54 kDa subunit (GB:AAA66200.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897); contains InterPro domain Signal peptide binding (SRP54) M-domain; (InterPro:IPR004125); contains InterPro domain Signal recognition particle protein SRP54; (InterPro:IPR006325) 1.16490654408198 9.70836758578886 1.34765802149669e-06 5.68945149758578e-05 13.8331869124739 8.93621730006034 1.16490654408198 0.146400407114758 AT5G25940_at 8.16023796547654 8.45147162159401 9.28958681463551 9.1535050214346 9.37811298385026 8.840027607026 8.19561499332905 8.10179568438618 7.35580654474405 7.8465018880819 9.20863758674184 9.06541308638879 8.90056149671264 8.31419151304221 8.66986349531595 8.86055084255635 8.47444025027849 8.8058177971173 7.91322017353229 0.172058097138026 0.171661702987697 0.175340086714501 0.182568994701515 0.173991182196658 0.182750383630900 0.171896957694898 0.175286615631328 0.206415990900412 0.183476082039867 0.177426853817695 0.174351383822185 0.173591134366387 0.192301816949134 0.175895588273333 0.175045894682621 0.199323716602146 0.175578986678673 0.188670044265377 5 5|0 -|/ 9054287 9055105 9054748.333 9054125 9055254 - gene protein_coding_gene TRUE TRUE AT5G25940.1 early nodulin-related similar to Early nodulin 93 (N-93) (GB:Q02921); contains InterPro domain Early nodulin 93 ENOD93 protein; (InterPro:IPR005050) 1.01014317346996 9.70100994685034 1.35749827784272e-06 5.72353426251834e-05 13.8264921285834 16.9425994417858 1.01014317346996 0.109678058382318 AT5G18420_at 6.65126253419314 7.51250929742888 8.49918229584881 8.32687884272795 8.5238285393537 8.28976115827679 7.02480411241913 7.35854162520011 6.09959948895991 6.08629441466236 7.19115738944905 7.66560902789763 7.3610127954887 7.46211520032144 7.4775053774718 7.39429473527404 7.20853957603763 7.29342615950093 6.21008417726268 0.209265388201012 0.214714158396148 0.220829032920715 0.218986412692252 0.218842403195243 0.215663028797847 0.213705096368229 0.220798554270947 0.218053188418258 0.221293090763508 0.215367468672632 0.208371748105495 0.214878574792891 0.215310425650255 0.215632363152468 0.21041698637784 0.211370178689205 0.220498556004424 0.217466111880202 5 5|0 -|/ 6105654 6107061 6106131.4 6105482 6109387 - gene protein_coding_gene TRUE TRUE AT5G18420.1|AT5G18420.2|AT5G18420.3 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96658.1); similar to Os11g0240900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067583.1); contains domain SUBFAMILY NOT NAMED (PTHR15975:SF3); contains domain FAMILY NOT NAMED (PTHR15975) 1.26142407789667 9.7003599258780 1.35837136950912e-06 5.72353426251834e-05 13.8259004070801 14.5301961638353 1.26142407789667 0.167568638259622 AT5G54310_at 8.61513691532457 9.05033159191626 9.4891016606389 9.53108451614237 9.8574098899705 9.41150227949482 8.46725734178143 8.37707302843922 7.99125435733407 8.2177695735211 9.23749301308516 9.18105976134066 9.13135609172902 9.17778806479452 9.25564554247809 9.21742087168304 8.83425497066609 9.35931719849362 8.10211106132792 0.149639510373090 0.144714111760422 0.149807878164987 0.148701711244721 0.151043403288024 0.158608633774904 0.145286135765633 0.15508102137183 0.174803840271628 0.148355726430881 0.147255126495934 0.146213696238216 0.142196939668020 0.148553573934500 0.149988309234858 0.144935268409966 0.149234433666072 0.149875412248013 0.162417730461979 5 5|0 -|/ 22074536 22075506 22075017.3 22074278 22078482 - gene protein_coding_gene TRUE TRUE AT5G54310.1 AGD5 (ARF-GAP DOMAIN 5); DNA binding A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. similar to AGD15 (ARF-GAP DOMAIN 15), DNA binding [Arabidopsis thaliana] (TAIR:AT3G17660.1); similar to Arf GTPase activating protein [Medicago truncatula] (GB:ABE84233.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 1.00770257120951 9.6955551830575 1.36484390453151e-06 5.74522315549564e-05 13.8215252779953 17.7388639546359 1.00770257120951 0.109192388063715 AT5G02290_at 9.96426253881977 10.1908372545673 10.9237839462275 10.9129147815067 10.8154219212412 10.6380151735657 8.88218509419644 8.96134744916946 9.50502729297032 8.81569240909579 9.6318727268662 9.39727070649808 9.43221262085617 9.58062541140205 9.09030593418154 9.30458821429322 9.28129003690345 9.4952697882322 8.88194664944342 0.093885340903325 0.093128678012966 0.0957330149384393 0.0938878885386254 0.0949146963973205 0.0955884396668302 0.0954136410275644 0.099076416882946 0.0999159762565331 0.0953320033001305 0.0946172343631813 0.093128678012966 0.093731839877879 0.0973059936699018 0.0959228176163406 0.0968785350287893 0.0984132051160234 0.096858242925537 0.097960358222244 5 5 - 470395 471120 470695.455 470180 472782 - gene protein_coding_gene TRUE TRUE AT5G02290.1|AT5G02290.2 NAK; kinase Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl. Identical to Probable serine/threonine-protein kinase NAK (EC 2.7.11.1) (NAK) [Arabidopsis Thaliana] (GB:P43293;GB:Q9LZ96); similar to APK1A (Arabidopsis protein kinase 1A), kinase [Arabidopsis thaliana] (TAIR:AT1G07570.1); similar to protein kinase (GB:AAA18853.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.828499925424001 9.69366110350974 1.36740463369914e-06 5.75041944970324e-05 13.8197999189014 19.3957134601154 0.828499925424001 0.0516834274121009 AT5G04750_at 10.0465880547000 9.93698371742087 11.0718518392455 10.9138782690406 10.9356596786966 10.5154384698986 9.7211535574388 9.53054409147288 9.30823232534635 9.4988736846726 10.2604385361834 10.0628752802323 10.2894335749177 10.3324080344971 9.9394717620308 10.3749074818189 10.1685400122583 10.1625380707746 9.3858701789087 0.0921847943527377 0.091764738922566 0.088964832603438 0.0898955369540238 0.0893545704411825 0.0930265395968933 0.0918430630813482 0.0927514932730848 0.103475003016256 0.0926242069503013 0.0908703914918813 0.0895585431876897 0.0904474679412931 0.090379700125065 0.0936290594835639 0.091588066165925 0.101239772033842 0.0926421256808993 0.0915349168328158 5 5|0 +|/ 1372212 1372338 1372276.3 1372148 1373620 + gene protein_coding_gene TRUE TRUE AT5G04750.1|AT5G04750.2 F1F0-ATPase inhibitor protein, putative similar to Os08g0558900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062498.1); similar to Os02g0533800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047032.1); similar to F1F0-ATPase inhibitor protein [Oryza sativa (japonica cultivar-group)] (GB:BAA81661.1)| 0.925778786704375 9.69197121746692 1.36969370065439e-06 5.75446434503076e-05 13.8182602596704 20.1322548716050 0.925778786704375 0.08650770397776 AT5G58490_at 8.25562017480984 8.37612530631436 9.34045867025074 9.19513244490357 9.26898172157583 8.92022229023021 8.62528082608329 8.79730502869195 7.75435218238174 8.05515351227847 8.67383074329259 9.05748447939312 8.73092219546853 8.97847093310966 9.10712271025515 8.94222702898846 8.60367461152351 8.82215055987005 7.45448226786422 0.121390024013240 0.119861042949147 0.121110725351827 0.121520690447617 0.118555674330977 0.123519767170421 0.119599273163457 0.122545710773009 0.133221861888575 0.120282899339113 0.125635004958575 0.116797147177324 0.121549236221861 0.118494958306199 0.121204121482376 0.117898232431466 0.127531997540318 0.123230641924001 0.138010158154977 5 5|0 +|/ 23660843 23661547 23661201.5 23660244 23661824 + gene protein_coding_gene TRUE TRUE AT5G58490.1 cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G02400.1); similar to NmrA-like family protein [Solanum demissum] (GB:AAT39306.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.888719350664025 9.69059871184525 1.37155591355534e-06 5.756709812394e-05 13.8170095551141 17.1569648388137 0.888719350664025 0.0748082036477778 AT5G02740_at 5.91736882840648 6.71604472651681 7.49489150172582 7.76057287644039 7.89398994470949 7.34395511594263 6.65996713402805 6.62842290480521 5.36648869623195 5.74168337276804 6.7769506948101 6.99607783223122 6.81962435864498 6.9669995125998 7.35068618350533 6.82960473578662 6.74308546358511 6.82223042955811 5.32152234172661 0.251397196993687 0.233471927007781 0.240208966799587 0.247575202397563 0.236134153025425 0.237531025807258 0.238553528255285 0.238437699155136 0.269634188239648 0.236925826931017 0.233471927007781 0.233471927007781 0.233471927007781 0.239180703161281 0.234155021738588 0.233471927007781 0.275470329373002 0.244346783094530 0.251611310339912 5 5|0 +|/ 616608 618223 617449 616432 618616 + gene protein_coding_gene TRUE TRUE AT5G02740.1|AT5G02740.2 nucleotide binding| similar to unknown [Helianthus annuus] (GB:AAR23805.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)|similar to unknown [Helianthus annuus] (GB:AAR23805.1) 1.28974702951504 9.68000296088346 1.38602500502803e-06 5.80438204275546e-05 13.8073477273929 13.2467627315297 1.28974702951504 0.17409016495429 AT5G24400_at 7.86644256935298 8.01691557872366 8.82063766597578 8.77254520712112 8.94745357985435 8.69683799520417 7.85096709868966 7.89860415861076 7.70460923511816 7.85143040061619 8.65544993626085 8.7991968103716 8.437668807731 8.48387538350626 8.66440782518417 8.55681853441136 8.4510252873804 8.68964297501424 7.95722644146855 0.139704998039508 0.132560008380487 0.135170371465761 0.135432354319077 0.134610455489175 0.137374704294079 0.137567359793059 0.140029556993910 0.139297745271973 0.141656156652229 0.132417056301920 0.131810745117465 0.133552748191423 0.130203544744137 0.136155928523171 0.131261509809243 0.143276899848857 0.142518841041358 0.137151119835332 5 5|0 -|/ 8330558 8331131 8330781.7 8330318 8331840 - gene protein_coding_gene TRUE TRUE AT5G24400.1 EMB2024 (EMBRYO DEFECTIVE 2024); catalytic similar to glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G49360.1); similar to putative 6-phosphogluconolactonase [Elaeis guineensis] (GB:AAO26315.1); contains InterPro domain 6-phosphogluconolactonase; (InterPro:IPR005900); contains InterPro domain Glucosamine/galactosamine-6-phosphate isomerase; (InterPro:IPR006148) 0.827820798304723 9.6794283980695 1.38681432203340e-06 5.80438204275546e-05 13.8068234841328 16.5738085087166 0.827820798304723 0.0519257639867956 AT5G06190_at 2.84462705005757 2.90562695273203 4.12099461640455 4.31379510169501 3.90885300333259 3.85650214541688 3.31249372619283 3.52745248027424 3.84637970472626 3.32598867943704 4.6182013758412 4.26482824964875 4.36103270165793 4.78901339057344 4.23227417264604 4.36002024106468 4.41239699713684 3.98341879484762 3.70188979327519 0.199273854538397 0.198316331225394 0.196704475203647 0.204028256951453 0.192237191678127 0.197206500030895 0.192973543353037 0.201662999709443 0.200936221850690 0.196353825704082 0.202603815237648 0.192237191678127 0.200116375362788 0.198864747715966 0.196296932218252 0.192237191678127 0.212957946412132 0.192734774575358 0.193414401157846 5 5 - 1876199 1876369 1876280.364 1876035 1876638 - gene protein_coding_gene TRUE TRUE AT5G06190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58540.1) 0.827690839506161 9.6793440822831 1.38693019353628e-06 5.80438204275546e-05 13.8067465498278 7.59999361763316 0.827690839506161 0.0518704886506116 AT5G52740_at 3.97200046660542 3.96086186390397 5.71997688629229 5.64833799307387 4.65179457176538 4.84302546864857 1.90267411653862 2.55532001390473 3.11419362200743 3.04600470172369 2.66650808119608 3.15955448150788 3.11802066986600 2.9226457051359 3.04470789658898 3.32507370686998 2.87727621210074 3.15428219319579 3.04271481571419 0.22545994314494 0.231455589589496 0.242502829287707 0.243220330929770 0.23447487420618 0.237533696539434 0.223213077022841 0.224742300195266 0.232217864710661 0.240246235024978 0.222235814957612 0.226640994286200 0.228007315305608 0.225931088203615 0.220076414269238 0.221179617901937 0.240163034430681 0.225677953014249 0.229335575688456 5 5|0 +|/ 21399962 21400372 21400251.8 21399756 21400406 + gene protein_coding_gene TRUE TRUE AT5G52740.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.04197025993304 9.67824587216847 1.3884403754624e-06 5.80509886305484e-05 13.8057444178192 7.20732208831966 1.04197025993304 0.118358778937195 AT5G26990_at 6.95075348340339 7.60146125205827 8.51389522472387 8.47591743061501 8.83044179447466 8.29885950340967 7.43505523250406 7.47967253165433 6.84046991112332 6.29275287120073 7.82956565206036 7.5796266096407 7.55102884519082 8.01562828163706 7.13264388195128 7.87995656418147 7.25125863975966 7.55486844157133 6.20508060344734 0.219835765370641 0.194004561216795 0.202533078543166 0.198702745002930 0.197227312400775 0.198171932067411 0.198445744032481 0.194907936185898 0.215631554745173 0.197572903300165 0.198907818171886 0.198936596979398 0.193110080423470 0.198757274803635 0.216952270926741 0.193110080423470 0.216836185014185 0.199941450209306 0.197654399325514 5 5 + 9492260 9493543 9492927.636 9491075 9493923 + gene protein_coding_gene TRUE TRUE AT5G26990.1 drought-responsive family protein similar to drought-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19; (InterPro:IPR008598) 1.15813192465471 9.67569489344025 1.39195519282120e-06 5.81418765116591e-05 13.8034161451684 14.9709686781502 1.15813192465471 0.145760251111696 AT5G67300_at 8.76892009182155 9.05662469370153 10.5352421757201 10.7535230484275 10.4519771061047 10.0865262926437 9.47914973121889 9.60280276589659 9.21112174717553 9.1551560270591 10.1416950406488 9.29400009851236 9.88741420728269 9.95143553696124 8.99884518126782 9.58207125844325 9.88867221983254 9.7664506772687 8.7484462485915 0.131875115531596 0.131869525820023 0.138935062329134 0.134184643493377 0.133674431995373 0.132794306724850 0.138983203882581 0.131715558088603 0.140040020663777 0.136812865959654 0.128116088931628 0.133196295726748 0.130111589078667 0.134228910914320 0.135304181837387 0.131887174177337 0.144467982683058 0.128116088931628 0.140649952151330 5 5 + 26871684 26872173 26871842.909 26871248 26873232 + gene protein_coding_gene TRUE TRUE AT5G67300.1 AtMYB44/AtMYBr1 (myb domain protein 44, myb domain protein r1); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G50060.1); similar to sucrose responsive element binding protein [Vitis vinifera] (GB:AAY28930.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.940262260824749 9.66894175975074 1.40130655692472e-06 5.84761469712092e-05 13.7972494074728 19.2053779224264 0.940262260824749 0.0914516286196208 AT5G11580_at 8.21830785807582 8.53606111843403 8.9584114223023 8.91946380840755 9.86920229810803 9.13172392735909 7.96399083246038 7.93839381233286 7.20118219813529 7.91504429271345 8.68180294746651 9.03156364116048 8.8718979253877 8.916521471774 8.4217022106708 9.15879843762654 8.8100616023523 8.69512603926492 7.752314032516 0.178851338567179 0.179226429057982 0.183126233354813 0.180073857203892 0.181479587174707 0.184984203035432 0.190855125484474 0.183138541519907 0.200033990068831 0.178475234129951 0.183593755860897 0.173388173755054 0.175872460262875 0.190049800193883 0.177344106875568 0.173388173755054 0.188693560003844 0.193306890517686 0.176834944564249 5 5 + 3720532 3721101 3720726.727 3718811 3721335 + gene protein_coding_gene TRUE TRUE AT5G11580.1 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to regulator of chromosome condensation family protein [Beta vulgaris] (GB:CAK22423.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 1.12804970102990 9.66577231041284 1.40571891547192e-06 5.86038694014153e-05 13.7943535851666 16.9150849474772 1.12804970102990 0.139200249821772 AT5G61210_at 10.707203615335 11.0225518977502 11.6340609990646 11.6436034094835 11.1688106765400 11.1725865642777 9.65484409478902 9.77469663817525 10.2232465814571 9.3729652369085 10.3907667736750 10.3471524073683 9.9092960650656 10.2768399064912 9.88543546437567 10.3048600382968 10.3581625662882 10.2056167075864 9.33335435220115 0.0986889096837488 0.096929375095539 0.0988038667961094 0.0984928018765703 0.0977930767310561 0.103852583038401 0.105671398229761 0.0990503109778008 0.102866959255959 0.103231049043640 0.0975929414055577 0.0939260579512114 0.098036887118521 0.097577610853583 0.102429328772059 0.0939321619781377 0.101198317993605 0.0991992715278733 0.101739781949072 5 5|0 +|/ 24641637 24642558 24642068.111 24640525 24642857 + gene protein_coding_gene TRUE TRUE AT5G61210.1 SNAP33 (synaptosomal-associated protein 33); t-SNARE membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation Identical to SNAP25 homologous protein SNAP33 (AtSNAP33) (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25-like protein 1) (Snap25a) (SNAP33) [Arabidopsis Thaliana] (GB:Q9S7P9); similar to SNAP30 (synaptosomal-associated protein 30) [Arabidopsis thaliana] (TAIR:AT1G13890.1); similar to SNAP-34 [Hordeum vulgare subsp. vulgare] (GB:AAP79417.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain SNAP-25; (InterPro:IPR000928); contains InterPro domain t-snare; (InterPro:IPR010989) 0.840759434225117 9.65390122511279 1.42237972180778e-06 5.9111690307561e-05 13.7834983477280 20.7737722192597 0.840759434225117 0.0584080605989686 AT5G22000_at 9.40161445161054 9.46518773293908 10.3019788051595 10.3057782918163 10.2637771002109 10.0288136024318 9.19751422635345 9.14367575861961 9.49140010851386 9.26711360599927 10.1436136769844 9.99566013398535 9.97932600036198 10.0643360234423 9.73512562594344 10.0392347582813 9.9242392438811 10.0869296875376 9.15323423404234 0.0916125612709112 0.0940587625790542 0.0891189615645264 0.0924333764002875 0.0949455190553813 0.09411554732319 0.094725420690824 0.096458033132726 0.0980907797432602 0.094954795872836 0.0891189615645264 0.0925981185187898 0.0922557789793962 0.095894451026014 0.0945958940213764 0.0900818358344148 0.0971889177217973 0.0956436490736887 0.093091524943123 5 5|0 +|/ 7278846 7279528 7279203 7277186 7280258 + gene protein_coding_gene TRUE TRUE AT5G22000.1|AT5G22000.2|AT5G22000.3 CIC7E11; protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G14220.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABD32420.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.807615534237157 9.6536959945389 1.42266963556651e-06 5.9111690307561e-05 13.7833105541925 19.4135295594696 0.807615534237157 0.0431466695884263 AT5G25140_at 3.71919034231508 3.90082405744670 6.83583133196503 6.92691983521195 7.40530587561825 7.16375374078917 7.24043372542711 6.87904761630867 5.95803639326361 6.32644718482167 6.30743459041123 4.77944313183926 6.49843442480654 6.79049141404355 5.05168862050485 6.86565412972563 6.97621262571642 6.20596697280704 5.74831712279211 0.237202769865727 0.231028630430043 0.216641820929787 0.221854462689031 0.22738093958679 0.220847639628062 0.227452656259405 0.223413891555351 0.230381101145343 0.218185846481326 0.219886461190356 0.230978118555322 0.220938403039225 0.223135634196385 0.225481774989259 0.216641820929787 0.220234694816923 0.220528702388300 0.226522047045942 5 5 + 8673969 8674394 8674089 8672427 8674632 + gene protein_coding_gene TRUE TRUE AT5G25140.1 CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B13 (EC 1.14.-.-) (CYP71B13) [Arabidopsis Thaliana] (GB:P58050); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25130.1); similar to CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25120.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.910780466147197 9.6533748166885 1.42312346797063e-06 5.9111690307561e-05 13.7830166560809 12.3565879684807 0.910780466147197 0.0830365392307003 AT5G10960_at 10.3361293124757 10.6487275016006 11.2027087522946 11.4144832374365 11.4053948156685 11.3394132280516 10.4180877271775 10.6742091131886 10.0932483077196 10.1757138111355 11.3169305523177 11.1687029536122 11.3225734829122 11.1016956867417 10.8842054889725 11.4065289907048 11.1660955916227 10.9734725170595 10.2945793338591 0.0965922781236644 0.0932601698643515 0.097880056297167 0.0953551163390622 0.0939808538881861 0.100149752300645 0.0978490672867905 0.0955982000659723 0.0996726707396025 0.100736720996864 0.099197127000014 0.0966623270625849 0.0970923683114818 0.0996222786041024 0.0994567125055704 0.0946153084986335 0.0982091338784226 0.0972257573330833 0.098751109375846 5 5 + 3464837 3465323 3465060.182 3464219 3465688 + gene protein_coding_gene TRUE TRUE AT5G10960.1 CCR4-NOT transcription complex protein, putative similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT1G80780.2); similar to Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] (GB:ABE87519.1); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.90044505092018 9.6532121557480 1.42335337189356e-06 5.9111690307561e-05 13.7828678070211 21.6075806154355 0.90044505092018 0.0797775983920366 AT5G60900_at 9.68608153725027 9.50864931316425 10.7103596636058 10.5435831187493 9.64838283121094 9.25707309645569 7.18447755216435 6.75472172263615 8.68023894885005 6.28482356681511 7.31791500746724 8.1711912343217 7.00114206971832 7.73247190838656 6.12638259759975 7.67551249195717 7.93816404663686 8.18745253282894 6.84836895391323 0.196082876505090 0.191724713630665 0.194929958474281 0.193771043547980 0.195500672013365 0.198716865542125 0.200858995529052 0.209349804368117 0.201501039207110 0.196440217368645 0.200090099569493 0.190856888292577 0.196731710734442 0.196443197473563 0.206350287012379 0.195295023697151 0.199801026253914 0.195516256897863 0.201353328895860 5 5 - 24515704 24516253 24515998.364 24515693 24518720 - gene protein_coding_gene TRUE TRUE AT5G60900.1 RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); carbohydrate binding / kinase Encodes a receptor-like protein kinase. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G34300.1); similar to receptor-like protein kinase (GB:AAA32857.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.00200115456173 9.6458250476348 1.43383684749332e-06 5.94900849186519e-05 13.7761051333721 16.5566275090583 1.00200115456173 0.109053275675335 AT5G40280_at 5.77384152328342 5.442130244237 6.66315576943066 6.53251700498064 7.00834478950102 6.53101850976447 4.8205878710162 5.09120309132914 5.41567449574488 5.33606559902887 5.87741882147143 6.20657496934262 5.66265718824262 6.02119939756617 5.35960166023377 6.28338494354716 5.56310329645847 6.22715735506715 5.04562689241855 0.217223481234821 0.213549515895522 0.212938970232083 0.221821049187808 0.209602433035435 0.228280836030919 0.213764742782027 0.211043982322777 0.226477502178461 0.215673495276766 0.209602433035435 0.217895819019308 0.218485464486227 0.220635202851852 0.211056901981652 0.213868150129457 0.225763504768058 0.212154824057094 0.209602433035435 5 0|5 /|+ 16121597 16121933 16121815.111 16118619 16122189 + gene protein_coding_gene TRUE TRUE AT5G40280.1 ERA1 (ENHANCED RESPONSE TO ABA 1); protein farnesyltransferase encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought. Identical to Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) (Enhanced response to abscisic acid 1) (FTB) [Arabidopsis Thaliana] (GB:Q38920;GB:Q38916;GB:Q9LLE9); similar to geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative [Arabidopsis thaliana] (TAIR:AT5G12210.2); similar to protein farnesyl transferase beta subunit (GB:AAA87585.1); similar to beta subunit of protein farnesyl transferase (GB:AAA86658.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) 1.01808327210658 9.6447427012421 1.43537989124097e-06 5.94971709208522e-05 13.7751138142978 11.5658129503038 1.01808327210658 0.113238043122038 AT5G10820_at 2.62415121711014 2.96136243197731 2.81829625513355 2.80258983597876 3.04359259814684 2.93856168087118 1.90322941263726 1.67103636471149 2.00872503043151 2.12621102043956 3.49116316563117 3.43574189323927 3.06764222201371 2.79284715359091 3.06904473506713 3.08973690677954 2.51451003378721 3.28535637302911 1.70606816480714 0.252552805461016 0.251680772501228 0.270232514033311 0.259624896376617 0.254732926883032 0.288939140294983 0.258661904589251 0.263940980462607 0.257419784144881 0.270385819780277 0.251680772501228 0.257413173537995 0.268505034895857 0.255740301784937 0.257962523429102 0.251680772501228 0.260406801090582 0.264664127824934 0.254462139843342 5 5 - 3420961 3421406 3421170.182 3420838 3423222 - gene protein_coding_gene TRUE TRUE AT5G10820.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G79710.1); similar to Biopterin transport-related protein BT1 [Medicago truncatula] (GB:ABE86620.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 0.878534570544858 9.6313049385062 1.45468815191018e-06 6.02399166552879e-05 13.7627963115944 5.11548083237998 0.878534570544858 0.0731968450734337 AT5G25470_at 3.49238154588354 3.40218294137056 4.23402344183148 4.24849319301642 4.79252088043015 4.54856562535971 2.94308662735073 3.60995226452539 3.05110221717329 3.21075907052361 3.86732080422535 4.12221520757806 4.48029572118082 3.70558477551114 3.86170709820144 4.29930449560713 4.67743722627216 4.24130948155752 3.14418155510498 0.220663581545374 0.220753148428652 0.242190506632481 0.232915199450028 0.249801125702377 0.250223566726880 0.225968362849929 0.225060840655056 0.235214417042023 0.223550008462067 0.220592461246818 0.223359031646249 0.235306237270997 0.226299375801304 0.225231909297731 0.220116681833701 0.229819129789901 0.223338364448041 0.222747820405187 5 5|0 -|/ 8865872 8866639 8866166.4 8865657 8867688 - gene protein_coding_gene TRUE TRUE AT5G25470.1|AT5G25470.2 DNA binding similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25475.3); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 1.05777458868815 9.61689720247056 1.47570360677420e-06 6.09966858833078e-05 13.7495693571349 7.555023047738 1.05777458868815 0.123896637915077 AT5G16400_at 9.31949870493114 9.61045535102337 10.2047282893339 10.1416573511021 10.2289897716971 10.2162234440864 9.44685056557682 9.69322626120787 9.92272094413764 9.77374287541868 10.9423128046977 10.8176424526574 10.8973410641790 11.0173324574272 10.6653199104432 11.0678057701563 10.5623846043215 10.5824682192243 9.64547405312623 0.144298820602243 0.134937449876056 0.149639096032457 0.146864262987631 0.137280513413801 0.134873355754181 0.138227798784786 0.139014573382852 0.145058795370610 0.137399588063938 0.139823710326241 0.132958492309266 0.137653743627196 0.138579860389714 0.142997938824511 0.140838154985572 0.153180991089866 0.140015593150551 0.145005562662803 5 5|0 -|/ 5363924 5365190 5364842.111 5363664 5365333 - gene protein_coding_gene TRUE TRUE AT5G16400.1 ATF2/TRXF2 (THIOREDOXIN F2); thiol-disulfide exchange intermediate Identical to Thioredoxin F-type 2, chloroplast precursor (TRX-F2) [Arabidopsis Thaliana] (GB:Q9XFH9); similar to ATF1/TRXF1 (THIOREDOXIN F-TYPE 1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G02730.1); similar to Thioredoxin F-type, chloroplast precursor (TRX-F) (GB:O48897); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.859410973098773 9.61599451398982 1.47703120850180e-06 6.09966858833078e-05 13.7487399465663 20.1575646513444 0.859410973098773 0.0669114633894388 AT5G56190_at 8.36119514978361 8.58772870361093 9.54765323436136 9.24048660726436 9.7046999774915 9.1257672014954 8.58717452774685 8.52005647020581 7.98245028878129 7.61716790184293 9.07096933267905 9.04715085083497 8.99388275316268 9.14467878158278 8.57047655007994 9.02733529905752 8.80005970746009 8.81317689234157 7.60801976059139 0.154743378721731 0.146572869307891 0.151666276892293 0.150879155015922 0.155201291210100 0.155586091756706 0.151800245210912 0.156342115198636 0.167996702513782 0.160156418267708 0.145800017557169 0.143643141940439 0.151739351325482 0.152131994311668 0.149348812047988 0.143643141940439 0.174357555530002 0.155962435151721 0.164048614541853 5 5|0 +|/ 22761422 22762106 22761882.333 22759231 22762403 + gene protein_coding_gene TRUE TRUE AT5G56190.1|AT5G56190.2 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G55680.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G13340.1); similar to Os02g0721600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047961.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE85775.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.04409999807216 9.61589114159392 1.47718332298140e-06 6.09966858833078e-05 13.7486449603903 17.2940180279808 1.04409999807216 0.120560463918114 AT5G61840_at 7.00380158629498 6.61165863158617 7.71499047900656 7.62541351120964 8.10505254433682 7.49348313694871 6.7043565969805 6.41896401334936 6.11079134405108 6.18960634008704 7.74402259877948 7.60731926258947 7.3982926468492 7.48028092957943 7.72907489438866 7.56704243885968 7.2770372506229 7.36887348880872 6.76678970353504 0.188581789543446 0.184711968908854 0.1804614446563 0.180826870972594 0.183111487829371 0.184016947787620 0.181305690803941 0.189578823809598 0.197681122529504 0.192781080212503 0.178599455014035 0.181826665950011 0.193525289875605 0.189968180047589 0.182182782147048 0.180814590263421 0.190637362254999 0.199019410146933 0.186145746249047 5 5 - 24856594 24857362 24856856.636 24856404 24859166 - gene protein_coding_gene TRUE TRUE AT5G61840.1 GUT1; catalytic similar to GUT2, catalytic [Arabidopsis thaliana] (TAIR:AT1G27440.1); similar to pectin-glucuronyltransferase [Nicotiana plumba (GB:BAC20928.1); similar to secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] (GB:AAX33320.1); similar to putative pectin-glucuronyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD26319.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 1.10790176020399 9.61272413311524 1.48185188279896e-06 6.11312424542282e-05 13.7457343533064 14.1483260964811 1.10790176020399 0.135962629523242 AT5G05090_at 7.14031227369996 7.72871034610073 7.69935640134922 8.20688605981336 8.88369971064876 8.5646023622791 7.80859227237223 7.49537478870136 7.60788112907278 6.18819631382867 8.2407653536766 8.41586162127246 8.4978229065281 8.72009817050283 8.1450767149904 8.31820104595885 8.25664780764132 8.64897534133015 6.65127167792553 0.178768845544635 0.171891451322449 0.179143365755852 0.171028460886726 0.172827066800569 0.173823639755424 0.174201879852433 0.167077708516823 0.178754606006145 0.181181370613730 0.166314393103788 0.164328481838519 0.170601535752381 0.167723023442276 0.180088106876257 0.164932622482283 0.178357673281906 0.176380785398990 0.190813821348688 5 5 + 1503644 1504149 1503918.091 1503233 1504495 + gene protein_coding_gene TRUE TRUE AT5G05090.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10760.1); similar to NbPCL1 [Nicotiana benthamiana] (GB:BAE16280.1); similar to Os05g0412000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055539.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.19251839663298 9.61132440842349 1.48392034717644e-06 6.11359010810635e-05 13.7444476256289 15.5515488571272 1.19251839663298 0.155144925441474 AT5G65540_at 5.05010923587796 5.1810979336436 5.85685864605234 6.00347807863728 5.7619302977797 5.93720972106223 4.54011391210609 4.64192540333669 5.28624176712125 4.79048354796937 5.65163075359104 5.61682488878022 5.6438468929176 5.53418218413567 5.94403705012337 5.66879620647402 5.4311550866208 5.50815824220538 5.01518365283314 0.209750857105639 0.209885830342012 0.220673087405663 0.216330208717129 0.206657255272307 0.231212866880891 0.208456913268180 0.210380596487644 0.209852708757379 0.215634378577308 0.212577399395479 0.210409726654348 0.216341709560968 0.220912877501057 0.206657255272307 0.208991376626195 0.213311044165746 0.211297774668020 0.207462068627133 5 5|0 +|/ 26214573 26215308 26214965 26212915 26215548 + gene protein_coding_gene TRUE TRUE AT5G65540.1 similar to PFT1 (PHYTOCHROME AND FLOWERING TIME 1) [Arabidopsis thaliana] (TAIR:AT1G25540.2); similar to hypothetical protein [Trifolium pratense] (GB:BAE71249.1) 0.815375077553281 9.61073998492267 1.48478491454390e-06 6.11359010810635e-05 13.7439103225381 10.6993230214356 0.815375077553281 0.0488687964588515 AT5G47080_at 7.41038301854617 7.54596026544802 8.81166109769083 8.61638233088529 9.4227627158261 8.94054154855512 8.18196375379183 7.5582323930654 7.25433648587602 6.8631876389361 8.2669356560187 7.80311050175359 8.17895101504934 8.07801231839181 7.82735671628655 8.27410032163584 8.09490557609142 7.96383336228501 7.0778053497453 0.160326085331235 0.168101943030460 0.162175492549591 0.162794105741861 0.158111581608051 0.163161922064573 0.161623184321486 0.168740113873411 0.169772198542878 0.180442080242386 0.158587668431685 0.164310230028570 0.163502495529629 0.178863076407620 0.158609257234203 0.162316757598351 0.171798859907835 0.164161749706318 0.177939184914085 5 5 - 19142247 19143139 19142697.364 19141839 19143838 - gene protein_coding_gene TRUE TRUE AT5G47080.1|AT5G47080.2|AT5G47080.3 CKB1 (casein kinase II beta chain 1); protein kinase CK2 regulator Regulatory subunit beta of casein kinase II. purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). Identical to Casein kinase II subunit beta (CK II beta) (CKB1) [Arabidopsis Thaliana] (GB:P40228); similar to CKB2 (casein kinase II beta chain 2), protein kinase CK2 regulator [Arabidopsis thaliana] (TAIR:AT4G17640.1); similar to Casein kinase II beta chain, putative [Brassica oleracea] (GB:ABD65048.1); contains InterPro domain Casein kinase II, regulatory subunit; (InterPro:IPR000704) 1.13474646205652 9.5999410939643 1.50085898866205e-06 6.17391181666757e-05 13.7339758630601 15.8739911446218 1.13474646205652 0.142504295333149 AT5G40020_at 2.24237730236433 2.61988951125075 3.64000316899904 3.85607130091097 2.86557899730167 3.1414578715417 2.51167829318077 3.29526831447640 3.12255140693491 3.05402910253078 4.96155402011102 4.13839311614352 4.63703492114936 5.41530712190757 4.04253395955186 5.2077554274481 5.55521327879252 6.28261495935055 3.70257458259845 0.317669329986121 0.313288787685181 0.29067657745328 0.298033970799954 0.291792527842071 0.302673623148172 0.295833082312354 0.306096459929256 0.307444362370146 0.294012845862298 0.302664953092164 0.294051743428158 0.303755969357964 0.305873402742607 0.301544454680084 0.296354534872476 0.314405746936421 0.300506325875514 0.296305867501135 5 5 - 16040125 16041197 16040590 16039981 16041544 - gene protein_coding_gene TRUE TRUE AT5G40020.1 pathogenesis-related thaumatin family protein similar to ATLP-1 (Arabidopsis thaumatin-like protein 1) [Arabidopsis thaliana] (TAIR:AT1G18250.1); similar to Thaumatin, pathogenesis-related [Medicago truncatula] (GB:ABE78554.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 1.22273681628619 9.59184773614535 1.51302962774798e-06 6.21807727743052e-05 13.7265225799317 7.18309186895896 1.22273681628619 0.162277242131015 AT5G46680_at 2.66393730604540 2.77220482704865 3.85711407214908 3.44382201749003 3.84505456006487 3.60136531386793 2.66265064961583 2.47246012070594 2.29251065297245 2.18031578332672 3.49179903298354 2.9806394137932 3.17770349130763 3.38515721823116 2.87117575794647 3.40093968946978 3.07376712701622 3.26637517402373 2.69315837934889 0.204456690662178 0.208487291852048 0.200376660113571 0.205715337047353 0.207865118654311 0.207770596713835 0.202241077094674 0.204362148662316 0.20336011762994 0.206656324797727 0.206966020707316 0.207068208824262 0.203087537167262 0.206128292982955 0.199708947185594 0.204962635174497 0.214015556870254 0.206994966158667 0.213178566994769 5 5 + 18959170 18959667 18959498.182 18958196 18959829 + gene protein_coding_gene TRUE TRUE AT5G46680.1 pentatricopeptide (PPR) repeat-containing protein similar to zinc finger (C3HC4-type RING finger) family protein / pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G17910.1); similar to Hypothetical PPR-repeat protein At4g17915 (GB:P0C043); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.930654386459734 9.57688448348987 1.53581396744417e-06 6.30094316701055e-05 13.7127251278655 5.96212921752971 0.930654386459734 0.0912589071322952 AT5G46520_at 4.68195857563248 4.31045326671461 5.33931024760915 5.38869588217296 4.98378966386221 4.29707698784404 2.3362506891434 2.52924412369676 2.77838423948773 2.65886931457824 3.41816250503633 3.32546362525729 3.16966891335917 3.70867635473375 3.24859273648769 3.00222151696067 3.15082842196691 3.53241935545363 2.42225568165010 0.296467417367163 0.277219927985923 0.27583610634002 0.303559605136445 0.271660168422843 0.272254944219976 0.266529849087248 0.266144162018311 0.259613909790183 0.273888978068299 0.263187329458644 0.259613909790183 0.262243701531586 0.270302250069126 0.275606149941975 0.259613909790183 0.259613909790183 0.259613909790183 0.264676053446539 5 5 + 18888910 18889505 18889294.667 18884994 18889642 + gene protein_coding_gene TRUE TRUE AT5G46520.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46510.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.11870464916342 9.57669835835925 1.53609971057374e-06 6.30094316701055e-05 13.7125533600067 7.2030177248656 1.11870464916342 0.139443395562668 AT5G14310_at 5.48487020584689 5.33006804689445 6.31761155435223 6.42081026062085 5.69858557601112 5.94674369318711 4.50613642365016 5.25014241058898 4.7692994355089 4.52002161396845 6.05648733731165 6.12487724474196 6.21007109517507 6.36810228054199 6.12255423489831 5.98345177027738 5.47881996458217 5.22299430432756 4.69842544904522 0.211955411593455 0.205692244675142 0.207927631781173 0.202537245034941 0.204709811240457 0.213351184649002 0.210952201104651 0.207595763893626 0.213876248339756 0.211091782232442 0.212105454003387 0.207333531517452 0.206357800574743 0.212018285182197 0.204248070449548 0.214113147101758 0.218661720090816 0.213932687611737 0.208754370492210 5 5|0 +|/ 4616346 4617354 4617085.1 4615321 4617618 + gene protein_coding_gene TRUE TRUE AT5G14310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27320.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89022.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.11823555605276 9.57083609337071 1.54512915749964e-06 6.33199061763485e-05 13.7071414855914 10.9236219939721 1.11823555605276 0.139493335160377 AT5G53800_at 6.15968007073582 6.02974081612587 6.94489777578419 6.89854968157165 7.44834587418631 7.10874690569434 5.4755529092334 5.72423525342685 6.27144515932123 6.41685758273967 6.51104542930578 7.0717640109588 6.98093169899035 7.13109185944316 6.55222431285825 7.09517082367441 6.77804720841374 6.65455076672024 6.31324163376723 0.180430044293453 0.182026948829088 0.183166475965031 0.18868269992119 0.189698263013796 0.193831008456872 0.185382206473719 0.184850044719962 0.190486400616462 0.183570577833571 0.179807814463402 0.187923895599085 0.177258356053163 0.181342204877983 0.178891314216434 0.183056326472622 0.1835182048926 0.182252159311382 0.185356184897255 5 5|0 +|/ 21865955 21866804 21866396.286 21865361 21867337 + gene protein_coding_gene TRUE TRUE AT5G53800.1 similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT1G20920.1); similar to hypothetical protein TTHERM_01026350 [Tetrahymena thermophila SB210] (GB:XP_001030734.1); similar to Os04g0530300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053388.1); similar to OSIGBa0155K17.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86384.1) 0.88291896772409 9.56742080158907 1.55041614345377e-06 6.34765718573306e-05 13.7039869671560 13.0640693553806 0.88291896772409 0.0766541767378447 AT5G42740_at 8.08836226430502 7.9491318578994 8.74163618207547 8.83108588482164 8.60168382198486 8.15751218017945 8.56031948114981 8.6355043124617 6.8564662053046 7.3037849060027 8.37694265218236 8.98540776952287 8.53663323715403 8.36046974895136 9.19266703503185 8.43472018116086 8.6911804705801 8.75428981872422 7.25267627529734 0.156065195190567 0.156761975077808 0.158020432115143 0.153074158745532 0.159618511409478 0.159081556651197 0.162809067905901 0.155988813618163 0.183132604604996 0.171629401128591 0.158954107143526 0.156801040543581 0.153074158745532 0.165470494677871 0.157549943912641 0.155451908168252 0.158256541300563 0.153074158745532 0.174721147935297 5 5|0 +|/ 17156689 17157710 17157123.125 17152987 17158120 + gene protein_coding_gene TRUE TRUE AT5G42740.1 glucose-6-phosphate isomerase, cytosolic (PGIC) Identical to Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (PGIC) [Arabidopsis Thaliana] (GB:Q9FXN0;GB:Q9FXN1;GB:Q9FXN2;GB:Q9FXN3;GB:Q9FXN4;GB:Q9FXN5); similar to PGI1 (CHLOROPLASTIC PHOSPHOGLUCOSE ISOMERASE) [Arabidopsis thaliana] (TAIR:AT4G24620.2); similar to cytosolic phosphoglucose isomerase [Arabis gemmifera] (GB:BAC77708.1); similar to cytosolic phosphoglucose isomerase [Arabis gemmifera] (GB:BAC77720.1); similar to Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (GB:Q9FXM5); contains InterPro domain Phosphoglucose isomerase (PGI); (InterPro:IPR001672) 0.90177322013664 9.55734601459481 1.56612690074932e-06 6.40593055747039e-05 13.6946744851477 16.3477451612922 0.90177322013664 0.0830531794804672 AT5G58640_at 6.91442297313972 7.23531045482896 7.70440554854837 8.1971509573146 7.90924335303908 7.87945027414164 6.07378470528517 6.8204533394564 6.42498413008316 5.83000626290978 7.36780773316163 7.51328655599274 7.26552112382879 7.63598060404022 7.63127724591576 7.66289530211262 6.93569577807513 7.41167427443064 6.14725057900476 0.202514720286176 0.197167703286962 0.203885218888967 0.209484202710059 0.207359840339022 0.201950569170228 0.193596195022038 0.203141698962188 0.213348427675440 0.215523821874342 0.197062192078416 0.195907350481244 0.203945777722034 0.201110599744512 0.197154197908538 0.193248232001274 0.215267329570101 0.200560269482774 0.20236049111112 5 5|0 +|/ 23715355 23716704 23716303.8 23715067 23716993 + gene protein_coding_gene TRUE TRUE AT5G58640.1|AT5G58640.2 selenoprotein-related|selenium binding similar to selenoprotein-related [Arabidopsis thaliana] (TAIR:AT3G47300.1); similar to SelT/selW/selH selenoprotein [Medicago truncatula] (GB:ABE80771.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893)|similar to selenoprotein-related [Arabidopsis thaliana] (TAIR:AT3G47300.1); similar to SelT/selW/selH selenoprotein [Medicago truncatula] (GB:ABE80771.1); similar to Os05g0467300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055791.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893) 1.22775333413941 9.54891116502585 1.57941315171479e-06 6.4541864690174e-05 13.6868698618349 14.1228265263162 1.22775333413941 0.164553828907831 AT5G20520_at 8.06976711230895 7.98573129174018 8.79706041815585 8.64863078659805 9.63697077409362 8.89580691123802 7.79818724256107 7.6712318063353 7.77071789818905 7.17043382613005 8.83629688914534 8.47448462280676 8.95637872176675 8.82083803373469 8.65501119100817 8.69156269917502 8.59930333094419 8.61113529435112 7.97881865794528 0.130402040057973 0.123694306625911 0.124168253735918 0.128956118437644 0.128002605701313 0.130663997523786 0.123989148700019 0.125679933223975 0.144257139186551 0.134560218649967 0.123612641501652 0.120096901001319 0.124230150153574 0.122169948371509 0.129579691807834 0.120096901001319 0.127570810899524 0.125142616349608 0.121408215316206 5 0|5 /|- 6943724 6945198 6944150.222 6943156 6946456 - gene protein_coding_gene TRUE TRUE AT5G20520.1 WAV2 (WAVY GROWTH 2) Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13610.1); similar to hypothetical protein LOC561333 [Danio rerio] (GB:NP_001032774.1); similar to Os07g0608300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060241.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 1.08951203986503 9.54609087283187 1.58388280004698e-06 6.46635685827091e-05 13.6842586665466 16.6107315305229 1.08951203986503 0.133435686795972 AT5G03440_at 5.24828759986193 6.16433894351232 6.68013922261249 6.74841232234937 7.46036502200802 7.21557999112465 4.89219568095531 5.75373752115361 4.65292641944713 5.47109119891940 6.84497831925264 6.70661758018172 6.30557903847557 6.69723981484462 6.52856380546363 6.74740945708723 6.49343410796117 6.13020341494337 5.03978119594695 0.249382661023810 0.237048718040189 0.239501717304240 0.233436615148503 0.237251832318434 0.242699805224514 0.238945784298972 0.236702415252688 0.248744596884747 0.236388023253440 0.236551142339765 0.235994337615197 0.232751580059761 0.247135689188371 0.233824629882489 0.232751580059761 0.25521967808607 0.245104868526526 0.232751580059761 5 5|0 -|/ 857181 857861 857511.286 856871 858427 - gene protein_coding_gene TRUE TRUE AT5G03440.1|AT5G03440.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54880.1); similar to hypothetical protein [Glycine max] (GB:AAN03467.1); similar to Os07g0479600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059637.1) 1.50681889532896 9.54331026196185 1.58830299501639e-06 6.47830264106119e-05 13.6816834119838 12.0760584364709 1.50681889532896 0.222022142185026 AT5G03610_at 3.53627416605124 4.05056797856619 5.37656518915222 5.73259177013273 3.73334676554671 3.32879779744411 3.19936243987232 3.4073565102298 3.20235769308636 2.97208097638072 4.39612535180185 5.11161776539867 3.8968695622951 3.9285303689343 5.26044109689439 4.41531151970928 3.44999124466174 4.04359062555529 3.21233186092693 0.213956793008397 0.212495865648675 0.218875511109257 0.225052848681743 0.212495865648675 0.226219981258058 0.212495865648675 0.212495865648675 0.242440907292111 0.215734384906025 0.221238557799695 0.217011578190378 0.217352587362651 0.220145659758164 0.221568812133673 0.212931277606207 0.228916263008959 0.233734315764446 0.215841080274531 5 5 + 917567 918293 917979.364 915464 918484 + gene protein_coding_gene TRUE TRUE AT5G03610.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G09930.1); similar to GDSL-lipase -like [Oryza sativa (japonica cultivar-group)] (GB:BAD46208.1); similar to Os09g0567800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063965.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 1.08916064433202 9.52795412846212 1.61295607701893e-06 6.5726734465509e-05 13.6674470791385 7.76647442814324 1.08916064433202 0.133843485706845 AT5G66820_at 6.74992314447243 6.94151689286574 7.8324729966055 8.08425588278376 7.55232636571494 8.0829991350061 5.49507385989641 6.04645120792687 5.691754979408 6.25248526146786 6.212978254098 7.00562415857512 6.5244682927097 6.4539826217645 6.53708521027325 7.19643719599746 7.29356885757971 6.6788482565214 6.23106448087757 0.222227318103611 0.233697962967089 0.232728251616449 0.226408260122349 0.231780730636395 0.233684696983915 0.223019986174438 0.222413811540419 0.228788905184002 0.223643562893829 0.234720448457389 0.222633924654956 0.236376257259497 0.230706511088984 0.229301833036185 0.222217643429038 0.228242496730001 0.233161465432538 0.238585136009298 5 5 + 26707749 26708289 26708016.818 26706285 26708340 + gene protein_coding_gene TRUE TRUE AT5G66820.1 similar to Os03g0186500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049202.1) 1.12960575871298 9.52700580337305 1.61449208726001e-06 6.57275517008741e-05 13.6665671135703 13.4962819422545 1.12960575871298 0.143304868537862 AT5G04320_at 3.16777483639112 3.0399279899728 3.72054830798005 3.53740665915731 3.45140970272799 3.69417322890303 2.5395926701463 2.49007532472714 2.77230340731680 2.98552388415023 3.56728677678327 4.57710242246303 3.66794031877165 3.56285445418186 4.29702983733209 3.76221227430298 3.13004241766385 3.5977888566585 2.96386176057900 0.202714669403498 0.199828193674006 0.201796200627452 0.200029970754098 0.196266401411505 0.202236715032868 0.207005636025016 0.201849387833587 0.198792560657984 0.202402188119568 0.196854857965533 0.200672177830160 0.197633280116284 0.205522496127888 0.206804211237462 0.198894670734839 0.205213310781284 0.200943835590523 0.195580515938015 5 0|5 /|+ 1211539 1212312 1211987.667 1209198 1212577 + gene protein_coding_gene TRUE TRUE AT5G04320.1|AT5G04320.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10440.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD36062.1); contains InterPro domain Shugoshin, C-terminal; (InterPro:IPR011515) 0.82729712756853 9.51811394330795 1.62897173228853e-06 6.62187287299135e-05 13.6583117188173 6.54386951689322 0.82729712756853 0.0577265787942198 AT5G05520_at 5.58835352367575 5.49554148900263 6.50311948413697 6.1653491708278 6.55973998104415 6.44098584913973 4.7359511422803 5.45141329602676 5.03275490264597 4.71224102498183 5.8675656454764 6.2588795489467 5.74774263252554 5.63556241854241 5.65619967246026 5.83092257484619 5.56086752868302 5.90044216683692 4.30599856997011 0.215683562484865 0.20746130331755 0.232614986000102 0.215649043104904 0.210719595094953 0.219316865736034 0.223605823179915 0.212035166391739 0.215878120409493 0.222531577100773 0.219593388335310 0.212117655578415 0.212755245323207 0.220139813277836 0.220183863954023 0.215509621020479 0.231387244786401 0.216551853770164 0.216596162662198 5 0|5 /|+ 1634432 1635021 1634686 1632846 1635343 + gene protein_coding_gene TRUE TRUE AT5G05520.1 outer membrane OMP85 family protein similar to outer membrane OMP85 family protein [Arabidopsis thaliana] (TAIR:AT3G11070.1); similar to Os12g0105700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065934.1); similar to outer membrane protein, OMP85 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91076.1); similar to Os05g0470800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055810.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) 1.11154584977392 9.51772296498078 1.62961163193282e-06 6.62187287299135e-05 13.6579485393661 11.1130255450529 1.11154584977392 0.139380625817343 AT5G10630_at 6.33159841771088 6.32510508771406 6.85114786519844 7.07600832493773 7.84924558030835 7.39501888479832 6.93278899645038 6.98400130836319 5.13228094572516 5.49563053624776 6.62314691831163 6.75413456515799 6.57142563442098 6.70020112276906 6.67814894656012 6.65263504691704 6.04014375477323 6.26749292041628 5.44215413683292 0.281062503840752 0.260154877828365 0.262770681989018 0.260154877828365 0.260154877828365 0.272255322817529 0.263398909627788 0.267191929108931 0.273979359817421 0.267664666158436 0.26212870133288 0.260154877828365 0.260550290598986 0.264967502060028 0.2697011084475 0.260154877828365 0.275646981101163 0.263657221289055 0.261301278732431 5 5|0 +|/ 3363287 3364342 3363851.667 3360174 3364597 + gene protein_coding_gene TRUE TRUE AT5G10630.1 elongation factor 1-alpha, putative / EF-1-alpha, putative similar to translation factor, nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G18070.2); similar to Os04g0595300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053733.1); similar to putative translation elongation factor eEF-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD52510.1); similar to Zinc finger, RanBP2-type; AAA ATPase; Translation elongation factor Tu [Medicago truncatula] (GB:ABE92795.1); contains InterPro domain Elongation factor Tu, C-terminal; (InterPro:IPR004160); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain EF-Tu/eEF-1alpha/eIF2-gamma, C-terminal; (InterPro:IPR009001); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) 0.914354642657466 9.51549899656529 1.63325670793999e-06 6.63047039449433e-05 13.6558823975389 12.9144166348190 0.914354642657466 0.08816434238796 AT5G41600_at 9.6383089774668 9.7585499354366 9.80490377375026 9.79534373777641 10.0569635603474 9.70785560324837 9.45172742844988 9.59462103052585 7.65081941568497 8.49717376055619 9.5916416942828 9.819298806897 9.82854306523066 9.42864867188517 9.65078370111275 9.58949359189068 9.38894977084778 9.69080155737619 8.28680799750974 0.112044013142474 0.111317935725632 0.111901413679360 0.112036906250009 0.113466664825501 0.116332386045002 0.111317935725632 0.112801362240238 0.138416063181825 0.120450964033960 0.112231402648035 0.111790800350298 0.111317935725632 0.118579040339582 0.113014880877841 0.111317935725632 0.127336842774255 0.114261232834386 0.11874760279651 5 5|0 +|/ 16653911 16654538 16654141.778 16653358 16654921 + gene protein_coding_gene TRUE TRUE AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3) similar to reticulon family protein (RTNLB3) [Arabidopsis thaliana] (TAIR:AT1G64090.1); similar to Os01g0736900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044177.1); similar to putative 24 kDa seed maturation protein-like protein [Solanum tuberosum] (GB:ABC01908.1); contains InterPro domain Reticulon; (InterPro:IPR003388) 0.854525604333785 9.5119362073918 1.63911454951334e-06 6.64802650813121e-05 13.6525713843792 18.6102611718872 0.854525604333785 0.0685358148290099 AT5G30490_at 3.75933687150107 3.65556394142708 5.06261501871392 5.25696247360774 5.40558200371277 5.03012036127314 4.34416713266415 3.63395166888381 3.1193182974412 3.49755962015612 4.76538560671058 4.13911615013804 4.12883393803802 4.5369122011657 4.24822330642092 4.59085643608848 4.4122469652781 4.18730684567276 3.7492483889745 0.229434524698136 0.234229862776395 0.226169654694442 0.225198088526656 0.225913220846336 0.240446490617243 0.221546816224030 0.2322078573903 0.226000547032382 0.248842922194035 0.221546816224030 0.231162315759271 0.225237209133504 0.235428732940523 0.222866197074548 0.223000360538283 0.235849354890261 0.236000829341529 0.227589430574101 5 5 + 11629550 11631451 11630323.273 11629213 11631760 + gene protein_coding_gene TRUE TRUE AT5G30490.1|AT5G30490.2 similar to BCNT [Hyacinthus orientalis] (GB:AAT08752.1); similar to Os01g0328500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042916.1); contains InterPro domain Bucentaur or craniofacial development; (InterPro:IPR011421) 1.13064990318650 9.50454332769802 1.65134255141348e-06 6.69136216744465e-05 13.6456967735042 8.43428024232947 1.13064990318650 0.144157464615019 AT5G22320_at 5.41242327204693 5.43028927108484 6.50962940041385 6.45409513194002 6.58852134850031 6.1622447436045 5.17487016866556 4.60105083858746 5.3077299481658 5.15920091791285 5.9915945719984 6.51608845983722 6.43106602539262 6.30394313018319 5.49091563539009 6.27692400644864 5.99249090918336 5.52817292472853 5.27768387222136 0.187918676691552 0.188508704644366 0.194925637037958 0.192917675932690 0.189288030141157 0.197250993610990 0.187479695883835 0.199325879486832 0.185151896869639 0.190127676469122 0.187175965933460 0.185028677293405 0.184831863296442 0.186299977117166 0.186667048693998 0.183068987772106 0.18717143596848 0.196214584044375 0.183736736674178 5 5 - 7388196 7388751 7388463 7388007 7390488 - gene protein_coding_gene TRUE TRUE AT5G22320.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G35470.1); similar to hypothetical protein DDBDRAFT_0188882 [Dictyostelium discoideum AX4] (GB:XP_635732.1); similar to Os01g0966400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045502.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, SDS22; (InterPro:IPR007092) 1.04607940682353 9.50250450354735 1.65473219508213e-06 6.69883665931186e-05 13.6437998873292 11.4489427071864 1.04607940682353 0.124115743067220 AT5G09240_at 5.76994039111375 5.76554069025539 6.09134396749268 6.44605096466089 6.63111555872834 6.21109745717484 6.22236554277088 6.22799014947659 6.11411374469474 5.70130323526165 7.57134869899926 7.9680170639371 7.47046885455417 7.51485106012893 8.10572534058876 7.27786357197314 6.93454763947971 7.5496160304915 6.25795662854178 0.224858969434600 0.217199094047982 0.22218737032922 0.219806359327211 0.210433347840128 0.224128833091332 0.224816171572565 0.220084066587233 0.217161662624501 0.212268368742099 0.215201321271739 0.216967288481514 0.212107498618596 0.217884887963677 0.217472042527674 0.210433347840128 0.224187301052499 0.212472440303229 0.212613322149829 5 5|0 -|/ 2873896 2874725 2874384.556 2873661 2874850 - gene protein_coding_gene TRUE TRUE AT5G09240.1|AT5G09240.2|AT5G09240.3 transcriptional coactivator p15 (PC4) family protein similar to KIWI, DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G09250.1); similar to Os01g0706000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044014.1); similar to Os02g0553600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047113.1); similar to ENSANGP00000015817 [Anopheles gambiae str. PEST] (GB:XP_320484.2); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173)|similar to KIWI, DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G09250.1); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173) 0.93651985331486 9.50044278161553 1.65816758250758e-06 6.70644539417452e-05 13.6418812614164 12.9574369162184 0.93651985331486 0.0951459598290887 AT5G49540_at 9.58183076038825 9.51782922637192 10.1722766295560 10.0700364407425 10.1653268906674 10.0150072422913 9.18603718702206 9.29164499891177 9.41347976186976 9.14318265575762 10.2127134488435 10.1929489776992 10.0407534917866 10.0735414254863 10.1130962645203 10.1951613878074 10.0971336073469 10.0532389943338 9.22975509581722 0.09410389642185 0.0892978790347753 0.0930625901230151 0.0930172486842829 0.0915828502038395 0.0931675683786295 0.0936927129370372 0.0899010893503952 0.0991215934604528 0.0990909312244888 0.0916218470910338 0.0903633392509076 0.0920016355925324 0.0913152132204904 0.0912257460796177 0.0892978790347753 0.0892978790347753 0.0905723893573785 0.100143172556046 5 5|0 -|/ 20122467 20122776 20122550.857 20121707 20123348 - gene protein_coding_gene TRUE TRUE AT5G49540.1 similar to Protein of unknown function DUF786 [Medicago truncatula] (GB:ABE90870.1); contains InterPro domain Protein of unknown function DUF786; (InterPro:IPR008504) 0.785755268110302 9.49952145181697 1.65970526762050e-06 6.70644539417452e-05 13.6410237357140 19.442229982432 0.785755268110302 0.038031989708936 AT5G42920_at 6.89764533090936 7.11693033495063 7.40690267949524 7.63142451427203 8.17711313369946 7.8105851239344 6.4885442756941 6.29175885759828 5.82448917300167 5.949231349989 6.72896454033083 7.00682031724775 6.90049025323343 6.67257182962421 6.70611312030309 7.01131053731544 6.55054258482985 6.58582587980656 6.19753358625196 0.182280434032788 0.186319850427732 0.188316107956706 0.194502074457538 0.193407401784261 0.189941323858838 0.183969626956813 0.190140554677922 0.196485188375989 0.191975130502153 0.186731687839572 0.182737562793099 0.183302511165894 0.191007671594574 0.182928427181732 0.183325487461101 0.207551434284869 0.198938769563718 0.189231889315750 5 5 - 17223540 17224275 17223884.182 17223379 17226763 - gene protein_coding_gene TRUE TRUE AT5G42920.1|AT5G42920.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45233.2); similar to expressed protein-like protein [Glycine max] (GB:ABC47853.1); contains domain FMS INTERACTING PROTEIN (PTHR13375)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45233.2); similar to expressed protein-like protein [Glycine max] (GB:ABC47865.1); similar to cold-induced protein [Ammopiptanthus mongolicus] (GB:ABH01186.1); similar to expressed protein-like protein [Glycine max] (GB:ABC47853.1); contains domain FMS INTERACTING PROTEIN (PTHR13375) 0.918849254742186 9.49261053776616 1.67128890337161e-06 6.74240364544193e-05 13.6345886238982 13.6079869909445 0.918849254742186 0.090181780759314 AT5G59820_at 4.69295644746006 4.68083617711059 6.64671173431441 7.21420286884543 4.32363367110681 4.88110858272856 3.12979200507326 3.29595767790858 2.88941582975785 2.53864158485957 3.00101977785886 3.26829920146008 3.17224221611162 2.64156780631423 2.93990654463055 2.81302892957448 3.10001874706399 3.34281389092106 2.44186814121949 0.256247848128728 0.261404850525193 0.272614126544460 0.289059300273029 0.258779536694527 0.25893431047606 0.250241965670666 0.256267421182483 0.250241965670666 0.250241965670666 0.257828934538948 0.258039254270371 0.253540612588076 0.255358388438739 0.251429305025803 0.250241965670666 0.250241965670666 0.255446560870761 0.258739045876385 5 5 + 24120320 24120665 24120488.273 24120198 24121013 + gene protein_coding_gene TRUE TRUE AT5G59820.1 RHL41 (RESPONSIVE TO HIGH LIGHT 41); nucleic acid binding / transcription factor/ zinc ion binding Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G46080.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52061.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.11404112899512 9.4923577015739 1.67171435057307e-06 6.74240364544193e-05 13.6343531014434 7.68723522449555 1.11404112899512 0.140652289587037 AT5G67380_at 8.19983261496824 8.3344439246782 8.75805305743859 9.06282654432217 9.3193380394599 9.41225808020095 7.98211101841995 8.08457394003279 8.57876825497155 8.04477504404446 9.1415930197665 8.95914470018378 9.04093482789719 8.98153694963003 8.99389060578915 9.12184766229809 9.22571668129662 9.1534781343379 8.55414362980351 0.146223624037516 0.144513315313722 0.151473420841103 0.151311135414003 0.157228175754218 0.154767822318699 0.146948040367966 0.145779984519899 0.156043314909301 0.166055724134961 0.149767216122695 0.143306928510252 0.148153003214973 0.145657775934676 0.146813827894835 0.144609242294726 0.144567846865347 0.146054297803904 0.157448685337311 5 0|5 /|- 26898570 26899484 26899090.6 26898192 26900656 - gene protein_coding_gene TRUE TRUE AT5G67380.1|AT5G67380.2 CKA1 (CASEIN KINASE ALPHA 1); kinase casein kinase II catalytic subunit alpha Identical to Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II) (CKA1) [Arabidopsis Thaliana] (GB:Q08467;GB:Q9FN14); similar to casein kinase II alpha chain, putative [Arabidopsis thaliana] (TAIR:AT2G23080.1); similar to CKA2 (casein kinase II alpha chain 2), kinase [Arabidopsis thaliana] (TAIR:AT3G50000.1); similar to casein kinase 2 catalytic subunit [Nicotiana tabacum] (GB:BAC02726.1); similar to protein kinase CK2 alpha subunit [Nicotiana tabacum] (GB:CAD26882.1); similar to protein kinase CK2 alpha chain [Nicotiana tabacum] (GB:CAD27342.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|Identical to Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II) (CKA1) [Arabidopsis Thaliana] (GB:Q08467;GB:Q9FN14); similar to CKA2 (casein kinase II alpha chain 2), kinase [Arabidopsis thaliana] (TAIR:AT3G50000.1); similar to protein kinase CK2 alpha subunit [Nicotiana tabacum] (GB:CAD26882.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.836292034437004 9.48839092108106 1.67840464824893e-06 6.76309588344372e-05 13.6306570938464 17.3790947185683 0.836292034437004 0.0624293032196032 AT5G24590_at 5.44200808048993 5.91712413383925 6.60088433242019 6.92614774762597 7.35636806842305 6.52816754694643 4.93480362771129 5.18582386075221 4.77336692727323 4.37308241056137 5.75663284769561 5.78293513841459 5.99585411040529 5.6520351794129 5.52411545258384 5.84867399189169 5.81845693769563 5.7911833095562 4.87141683050366 0.191443872525424 0.190089658469943 0.197904380603794 0.196165420309415 0.206122403678784 0.198751602763281 0.182961156974855 0.182961156974855 0.199351103594429 0.191495127874263 0.18993208176859 0.186535591947802 0.182961156974855 0.186917042115077 0.189238439958424 0.182961156974855 0.195436058610419 0.193700461779045 0.189967512173215 5 5 - 8416948 8417548 8417285.182 8416665 8418936 - gene protein_coding_gene TRUE TRUE AT5G24590.2 TIP (TCV-INTERACTING PROTEIN); transcription factor Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. similar to ANAC062 (Arabidopsis NAC domain containing protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT3G49530.1); similar to No apical meristem (NAM) protein [Medicago truncatula] (GB:ABE84505.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.29078290649998 9.482987891972 1.68756405023904e-06 6.79368966125646e-05 13.6256202599427 11.3333448883109 1.29078290649998 0.179881879413008 AT5G02820_at 5.36128164821791 5.76620904475486 5.64283693928901 5.79297804467078 6.29921607196527 5.85431181497733 4.5395859875819 4.89218008810308 4.75838767873318 4.12660602705574 5.81469964485477 6.3746050351229 5.99447107609885 6.04974553864312 5.81535580833302 6.27831561358549 4.93072300874806 5.74715741158146 4.76806230778307 0.259003168760331 0.250415502412264 0.268313286535703 0.252598992466778 0.262603504555072 0.255718189010296 0.25867335673538 0.252377825580195 0.257776723559918 0.262228983871841 0.255443203108696 0.250415502412264 0.250558212028433 0.270679930699173 0.255098469933813 0.251687522163965 0.269101192560923 0.255394899510451 0.265952931587825 5 5 + 643533 644097 643810.545 642556 644392 + gene protein_coding_gene TRUE TRUE AT5G02820.1 RHL2 (ROOT HAIRLESS 2); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication similar to DNA topoisomerase VIA (SPO11-1) [Arabidopsis thaliana] (TAIR:AT3G13170.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17008.1); similar to Os03g0284800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049765.1); contains InterPro domain Spo11/DNA topoisomerase VI, subunit A, N-terminal; (InterPro:IPR013049); contains InterPro domain DNA topoisomerase VI, subunit A; (InterPro:IPR004085); contains InterPro domain Spo11/DNA topoisomerase VI, subunit A; (InterPro:IPR002815); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.04106849824573 9.48187763480024 1.68945290258156e-06 6.79421645161524e-05 13.6245848775844 10.7319013616008 1.04106849824573 0.123436744453357 AT5G16600_at 1.90556309479152 2.00180236808008 2.59839824573583 2.41346627417614 2.68450453168408 2.42527052238095 2.28982038862707 2.6960954787649 2.42541138746161 2.47134554596074 3.72295769341377 5.09246346201904 3.91382045128825 4.42895040633691 3.70098131530407 4.1431934875597 3.74456251697259 3.59970824196836 2.63428489640866 0.210541593956849 0.207363662171402 0.205369103702587 0.206622002723271 0.209319552114716 0.208445770637281 0.203407048438346 0.206320623581612 0.210050061033348 0.205848382153912 0.203126757682952 0.218207429657226 0.207878386837502 0.222348359811360 0.210194225485853 0.217269609613084 0.2241687432494 0.202509062000543 0.203429486150213 5 5 + 5439661 5440191 5439915.909 5438294 5440248 + gene protein_coding_gene TRUE TRUE AT5G16600.1 MYB43 (myb domain protein 43); DNA binding / transcription factor Encodes a putative transcription factor (MYB43). similar to MYB20 (myb domain protein 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G66230.1); similar to myb-related transcription factor [Solanum lycopersicum] (GB:CAA67600.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.920035990587928 9.48106963561422 1.69082897253641e-06 6.79421645161524e-05 13.6238312890260 5.65370359976416 0.920035990587928 0.0908699398400675 AT5G57950_at 6.07604988875479 6.22359232900425 7.06538869080948 6.97034678908561 7.60787468735286 7.48025242879975 5.06502694776696 5.73661753898072 5.88800262417303 5.05813733738259 5.9627377587109 5.8358569828777 6.1033038130892 6.29696515739064 5.78884560282591 6.14405266571106 5.87506127529035 6.12323951992996 5.40816350234457 0.22182472783282 0.225188493779212 0.223230945849166 0.222324361094788 0.234178248443081 0.222619551002603 0.220733310237770 0.221902709452819 0.236507746939042 0.233053656364138 0.217715653356266 0.219023299854003 0.214185011963537 0.213144046636878 0.226542510529956 0.21470940332517 0.22988347619377 0.229941568107968 0.227553009729417 5 0|5 /|+ 23478634 23479158 23478967.125 23477935 23479614 + gene protein_coding_gene TRUE TRUE AT5G57950.1 26S proteasome regulatory subunit, putative similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_785837.1); similar to Os09g0420600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063197.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478) 1.03523366594836 9.47623492626313 1.6990882042656e-06 6.82108264855956e-05 13.6193207374394 12.2619898300418 1.03523366594836 0.122138237354020 AT5G20650_at 10.5947253005749 10.9948783190806 11.2648193108451 11.4395548353202 11.7322600584080 11.5959644269726 10.5344877731211 10.7403278149442 10.4110942109368 10.4062587555659 11.6858691454984 11.6062507805115 11.4467608041668 11.4492556380500 11.2881013214015 11.5450296795394 11.0480291292949 11.4785061693795 10.4558352834877 0.0908516014622076 0.0902642221133073 0.0955848349235781 0.0947483652976508 0.090170372188112 0.092224151382462 0.0902290825227206 0.0890910655663288 0.0956761903656899 0.0929646581269253 0.0889049209234568 0.0883621642864532 0.0918935344032689 0.0911094430418664 0.0913961122637616 0.0883621642864532 0.109083679422655 0.0960779254103812 0.092627753040414 5 5 - 6985494 6985832 6985663.273 6985300 6986039 - gene protein_coding_gene TRUE TRUE AT5G20650.1 COPT5 (copper transporter 5); copper ion transporter encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast similar to copper transporter, putative [Arabidopsis thaliana] (TAIR:AT2G26975.1); similar to Ctr copper transporter [Medicago truncatula] (GB:ABE81754.1); similar to Os09g0440700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063282.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) 0.905562053053186 9.4702513737709 1.70937066389364e-06 6.85601398477016e-05 13.6137350198585 22.0460629383135 0.905562053053186 0.0868040475027405 AT5G43680_at 3.22686348115041 3.22003183424774 3.97015326494145 3.94888072188025 4.04848064032006 3.51353437068408 3.04461868038954 2.88299866991749 3.16299645802016 2.76068899484165 4.14559902726122 4.16028669681776 4.05227770840175 4.67815509404794 4.15385588818003 3.97420068278975 3.7327917410927 3.57141028918134 2.95037496440215 0.211845855022053 0.208474299264927 0.212722271959256 0.211396816170145 0.219320212834162 0.211224183890674 0.215645626015475 0.210293930071733 0.215755183748068 0.211761582124557 0.210752883229840 0.210268437232195 0.212172813307614 0.218173375284731 0.210126760433041 0.211557352504524 0.222586914308971 0.212081246920028 0.218468164442661 5 5|0 +|/ 17561790 17562605 17562208.4 17561256 17562979 + gene protein_coding_gene TRUE TRUE AT5G43680.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94193.2) 0.938593042456871 9.46373842847228 1.72063962025563e-06 6.89414365481566e-05 13.6076508918276 6.99024134797115 0.938593042456871 0.0967850242672528 AT5G37500_at 2.96277177174579 2.92241090707352 2.94460294416131 2.66310786396019 3.8664751160132 3.63297937780021 2.00285621815008 2.17302175036803 2.62163178831546 2.05538398619905 3.22515171649488 3.94123054948784 3.1817860356342 2.98805501237255 3.87863989658935 2.87363039839974 3.14405600876772 2.90126166106711 2.28024300333155 0.241390887122183 0.245163178199893 0.250387085174934 0.245130120142401 0.248238610650690 0.253249708664561 0.243680177398699 0.255179117083213 0.254940724355111 0.249765637180032 0.247515948850136 0.254816309699192 0.245231015684075 0.245275259536341 0.248570544361794 0.241390887122183 0.24676641168787 0.245423712413855 0.248817611194367 5 5 - 14907074 14907699 14907350 14906922 14912134 - gene protein_coding_gene TRUE TRUE AT5G37500.1 GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel encodes a guard cell outward potassium channel. Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold. Identical to Potassium channel GORK (Guard cell outward rectifying K(+) channel) (AtGORK) (GORK) [Arabidopsis Thaliana] (GB:Q94A76;GB:Q9FNY5); similar to SKOR (stelar K+ outward rectifier), cyclic nucleotide binding / outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT3G02850.1); similar to outwardly rectifying potassium channel [Samanea saman] (GB:CAC10514.1); similar to shaker-like potassium channel [Vitis vinifera] (GB:CAD35400.1); similar to potassium channel TORK1 [Nicotiana tabacum] (GB:BAD81036.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 0.854583157109514 9.46292224902086 1.72205747748976e-06 6.89414365481566e-05 13.6068881402070 5.68893457822589 0.854583157109514 0.0701554829852569 AT5G49220_at 3.94069372022394 3.78371927585218 5.01960514007511 4.81250984739553 5.52694928818644 4.76680651453937 4.71711628523122 4.2752714620476 3.06032026005518 4.16894860800994 5.09953169332355 6.00351705556255 5.16740851587469 4.68940672219601 5.10165736992176 5.10121308757363 4.90081910882186 4.97238379212063 3.58312459382988 0.271130299738758 0.272078581085943 0.282745331626581 0.27130426498862 0.270725310573345 0.281970478708586 0.27128004663541 0.282951913870010 0.295805353911486 0.268240678651646 0.277775266223688 0.27120795337294 0.274779801212278 0.276790580052613 0.277108495051057 0.273042619262275 0.276601286410113 0.270104276591247 0.268240678651646 5 5|0 +|/ 19975079 19975649 19975363 19973663 19976059 + gene protein_coding_gene TRUE TRUE AT5G49220.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01260.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO39871.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46235.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) 1.18881426295986 9.4542312512336 1.73723420480406e-06 6.94848672082807e-05 13.5987617772053 8.9721456027636 1.18881426295986 0.158661336675612 AT5G58250_at 9.36206187553997 9.46894966189625 9.61456083893128 9.6305276231259 9.9353771651104 9.59520580019781 8.98656006068774 8.88549811388139 9.13184198944638 8.99288255567529 10.1222811667751 10.5616250683659 9.78987725393106 9.9405688089545 10.8316902146525 10.0740967561337 9.83328051556107 9.9463800820305 8.8161012250769 0.131137139426968 0.130118719643047 0.133439009134902 0.135112994742221 0.129371404394877 0.141531437881585 0.128852697840953 0.135805879823744 0.150714139593364 0.135896371600276 0.129942385071078 0.126116055479012 0.131493994227349 0.131216268217087 0.130226217367516 0.126070402114399 0.144452069210801 0.132261800834643 0.137098949412530 5 5|0 +|/ 23576864 23577480 23577212.4 23576700 23577739 + gene protein_coding_gene TRUE TRUE AT5G58250.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95764.1) 0.837675077703847 9.45276629694018 1.73980664896656e-06 6.95236221270852e-05 13.5973912256740 18.9937177624380 0.837675077703847 0.0641960525417689 AT5G44790_at 8.41654953837315 8.34987790057814 9.40655140582138 9.33109744227087 9.65553394652246 9.016370579813 7.86919170096231 7.61085780585092 7.8405234974847 7.96644215952277 8.82475638563479 8.63608829900348 8.62090284024602 8.74274908777556 8.73804362903647 8.97804817532637 8.90251737737142 8.63347385775946 8.18815463581968 0.163300994775469 0.161297422128177 0.160573369049824 0.162503016602162 0.168232415524578 0.179155622597336 0.161015535671673 0.1719807896906 0.179568111947211 0.165893287173467 0.160899165860474 0.163939620437230 0.160467614123454 0.166739937772698 0.158523846039763 0.162001783019965 0.170341147979635 0.170622146586288 0.165385002434084 5 5 - 18093091 18093804 18093321.455 18092837 18097215 - gene protein_coding_gene TRUE TRUE AT5G44790.1 RAN1 (RESPONSIVE-TO-ANTAGONIST1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism ATP dependent copper transporter vital for ethylene response pathway Identical to Copper-transporting ATPase RAN1 (EC 3.6.3.4) (Responsive-to-antagonist 1) (RAN1) [Arabidopsis Thaliana] (GB:Q9S7J8); similar to HMA5 (HEAVY METAL ATPASE 5), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G63440.1); similar to copper-transporting P-type ATPase [Brassica napus] (GB:AAL02122.1); similar to putative ATP dependent copper transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD45393.1); similar to putative copper-exporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD25508.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P type cation/copper-transporter; (InterPro:IPR006403); contains InterPro domain Heavy metal translocating P-type ATPase; (InterPro:IPR006416); contains InterPro domain Copper ion-binding; (InterPro:IPR006122); contains InterPro domain Copper-transporting ATPase 1; (InterPro:IPR001877); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 1.02598406637131 9.4487403336257 1.74689749735206e-06 6.96826740582676e-05 13.5936235506088 17.0859767337548 1.02598406637131 0.120568889302771 AT5G60100_at 5.6102304414531 4.62041347574177 5.47545762127712 5.17370316098443 6.8380025315188 6.16657427855418 1.47957735247896 1.66614699270631 1.75311198892940 2.0113114876704 1.98051689504644 1.86679509618937 2.19588751822835 2.44351426116007 2.41784099654614 2.29680890173704 3.12652359006198 1.97441267382104 2.03963853678872 0.287566217561971 0.275142128409498 0.271984896545563 0.277342134852267 0.285072369580715 0.284298812404240 0.266575018443632 0.271097977228505 0.271907372002138 0.26618424533876 0.26618424533876 0.268968314085284 0.274289783673100 0.278236862345533 0.272313378325055 0.274355676998236 0.272272874596609 0.26618424533876 0.26618424533876 5 5|0 -|/ 24215580 24216238 24215948.8 24215441 24217728 - gene protein_coding_gene TRUE TRUE AT5G60100.1 APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator Encodes pseudo-response regulator 3 (APRR3). Identical to Two-component response regulator-like APRR3 (Pseudo-response regulator 3) (APRR3) [Arabidopsis Thaliana] (GB:Q9LVG4); similar to PRR7 (PSEUDO-RESPONSE REGULATOR 7), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G02810.1); similar to Response regulator receiver; CCT [Medicago truncatula] (GB:ABE85490.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 1.46122124314562 9.4486815708027 1.74700122690948e-06 6.96826740582676e-05 13.5935685452856 6.74000064653682 1.46122124314562 0.215896877864309 AT5G46780_at 8.04930098660654 8.1272742693651 9.11866674054108 8.97764300798919 9.66964478063288 9.06751410335436 7.69220630041502 7.31040110910891 7.48161722448055 7.65148069500575 8.4902385194386 8.12623660867993 8.4761734440945 8.62441219042901 7.60903351317269 8.93173031206058 8.45990516791688 8.20519663121175 7.91811979991216 0.191707721529729 0.185131396679293 0.201297673470291 0.195410049580849 0.194320497456521 0.191006722115304 0.194607471264600 0.193157275989319 0.225183490107084 0.186210216233705 0.192421734539159 0.184692629651246 0.188460357483157 0.191929882961589 0.191794777955172 0.183667103922577 0.202512760416879 0.204371567908342 0.188315806101160 5 5 + 18996625 18997135 18996970.909 18996204 18997284 + gene protein_coding_gene TRUE TRUE AT5G46780.1|AT5G46780.2 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT2G35230.1); similar to putative hydroxyproline-rich glycoprotein [Oryza sativa] (GB:AAL67588.1); similar to Os10g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065489.1); contains InterPro domain VQ; (InterPro:IPR008889) 1.04759902516575 9.42897527562958 1.78216689956972e-06 7.09549907147e-05 13.5751020883865 16.5261339313391 1.04759902516575 0.126496221841685 AT5G53370_at 10.6496055618436 10.7121869511147 11.8430371414486 11.8169644434736 11.2908716871099 11.1820895998929 10.4050152236060 10.2888754392523 10.5421336069719 10.4250447832743 11.0796867651297 10.8355803796840 10.9819624533103 11.0955738493163 10.3214745013409 11.1235370646641 11.1018922214928 11.1600369886984 10.3703790033973 0.093725645599333 0.0861174141378792 0.0880274585298405 0.0887806299605272 0.0881059481725219 0.08664684147564 0.087131860943855 0.0880947049402466 0.0974741838356747 0.0901750495682611 0.0861174141378792 0.0861174141378792 0.0873849744812715 0.092458027209438 0.0896140158352368 0.0861174141378792 0.0932871477908434 0.0890454229574262 0.0892308308723043 5 5 - 21666909 21667459 21667192.545 21666758 21668819 - gene protein_coding_gene TRUE TRUE AT5G53370.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G49220.1); similar to pectinesterase inhibitor [Lycoris aurea] (GB:ABJ99595.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE82757.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE80825.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.767967743716917 9.42897229155463 1.78217228239326e-06 7.09549907147e-05 13.5750992889966 21.7277410022189 0.767967743716917 0.0299330585834707 AT5G43720_at 5.07505907434535 5.53642595637584 6.3203303884186 6.76526241939726 6.55592908413424 6.41772731595328 6.0251880493263 5.86155966443568 4.50336102432944 5.15488137963377 6.09257278656907 6.23425150482508 6.08110708181788 5.63711495108138 6.51626135789731 5.97658259606864 6.13569251487202 6.24889318568845 5.30289374612034 0.248140897564323 0.242319840850921 0.243759407312295 0.243638750865011 0.245317054532469 0.250115428208142 0.243592477294292 0.246475932193670 0.267265262600875 0.243293715430893 0.244161985285149 0.243121420431503 0.241762491559466 0.246244446307636 0.245906051845201 0.239037946347102 0.262730785942707 0.252719605841227 0.239249378862999 5 5|0 -|/ 17574815 17575605 17575103.8 17574393 17576581 - gene protein_coding_gene TRUE TRUE AT5G43720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04230.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54460.1); similar to Os03g0797700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051564.1); contains domain no description (G3D.1.20.5.20) 1.00925911492318 9.42552739361568 1.78839813562685e-06 7.11375416505039e-05 13.5718669777995 11.6208626844051 1.00925911492318 0.116949349397409 AT5G10870_at 6.51630238052674 6.04203401580368 7.82475237411258 7.20553883162691 7.84924798339442 6.92610454654529 6.22274773386716 6.16922230071883 5.26793096706111 5.01418520575599 6.72857578045315 6.92923178346201 6.21629121583171 6.90307867780337 6.65673684077949 6.17057373251539 6.13158616806113 6.82872342829082 4.52791633396389 0.278628217638257 0.278032543127406 0.270774888343231 0.275599986109400 0.273556780755096 0.295227836337047 0.264530517587169 0.269487957810903 0.270511386682989 0.271255556669113 0.268214727733854 0.266910690897505 0.271338003914318 0.277304841661045 0.264850287848995 0.264530517587169 0.286097568632056 0.27520652506213 0.278961424893609 5 5|0 -|/ 3430698 3431448 3431018.4 3430547 3432463 - gene protein_coding_gene TRUE TRUE AT5G10870.1 ATCM2 (CHORISMATE MUTASE 2); chorismate mutase Encodes chorismate mutase AtCM2. similar to CM1 (chorismate mutase 1), chorismate mutase [Arabidopsis thaliana] (TAIR:AT3G29200.1); similar to chorismate mutase [Medicago truncatula] (GB:ABE94587.1); contains InterPro domain Chorismate mutase; (InterPro:IPR002701); contains InterPro domain Chorismate mutase of the AroQ class, eukaryotic type; (InterPro:IPR008238) 1.423878263665 9.41683865431698 1.80420602370628e-06 7.17005554805837e-05 13.5637089311155 12.5981323736544 1.423878263665 0.209347129392598 AT5G17060_at 5.99476970766122 6.33377682941751 7.67458668141252 7.3094120924216 7.41484247006857 7.00640506702448 6.76622270039309 5.97037248008688 4.38499030961257 5.17486292358506 6.27102991100006 6.51912793735772 6.46534326593937 6.28403081283651 5.5503554304752 6.90054800164546 6.80108865634577 6.09923725039005 5.16579338106919 0.234775142036731 0.228383427396266 0.24291055747592 0.239023315344131 0.232420081547347 0.235232115877163 0.231275489837877 0.23999358357947 0.250823443264831 0.235113364991598 0.238065456832638 0.239467268482596 0.238070116417867 0.242297000817119 0.234957278663747 0.229821596986901 0.235163913302041 0.233778710263248 0.234084341456915 5 5|0 +|/ 5611081 5612607 5612217.1 5610809 5613063 + gene protein_coding_gene TRUE TRUE AT5G17060.1 ADP-ribosylation factor, putative A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins. similar to ATARFB1C (ADP-ribosylation factor B1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G03120.1); similar to ADP-ribosylation factor [Daucus carota] (GB:AAW67545.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 1.26891121758431 9.41475381413104 1.8080215829536e-06 7.1742908581935e-05 13.5617502578246 12.4437455183963 1.26891121758431 0.177199609637263 AT5G19590_at 10.6654499131857 10.8364424060582 11.5218504638832 11.5650007680912 11.5361987629557 11.3360510104502 10.6820161736897 10.6011923570071 10.3070764382533 10.3844720413052 11.2121837459473 11.0735756264729 11.2824760094061 11.0645931508330 10.8838142206743 11.2944058124920 11.2661667521742 11.0735963457929 10.3359150111383 0.0778868717539783 0.0792463925214381 0.0776182898962084 0.0786848495531835 0.0799143103589594 0.079481756913425 0.0789717833912735 0.0795904112701804 0.079514512329879 0.081334572807015 0.0794101016116583 0.0776182898962084 0.0794847358140538 0.0832905633944891 0.083006398499141 0.0787851973646526 0.0821689398540734 0.0798817775024948 0.0787355924653201 5 5 - 6611665 6611997 6611843.182 6610732 6612105 - gene protein_coding_gene TRUE TRUE AT5G19590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02360.1); similar to protein of unknown function [Oryza sativa (japonica cultivar-group)] (GB:AAT76982.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO38494.1); similar to Os01g0595400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043469.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.797431833300868 9.41444846688887 1.80858114682396e-06 7.1742908581935e-05 13.5614633509982 21.8361948760183 0.797431833300868 0.0482360171287775 AT5G52510_at 6.39707563781205 6.44393993725938 7.20330461707785 7.43617183087756 7.33951533338092 6.68704557888424 6.60445846144036 7.01446015159105 6.35884290903316 6.13527416489795 7.95034177226599 8.12407355779796 8.25117545781483 8.34989859288893 7.39567327086308 8.2302044155406 7.70689298239969 6.8998316330286 6.15119475621304 0.208387112485911 0.205645995746521 0.207036813955671 0.204845736350501 0.209540250838092 0.210785508563364 0.216721111398726 0.20800499880413 0.219259821051264 0.207537394586699 0.205641512976071 0.209867170865427 0.209040620418095 0.211738803800047 0.210617042952511 0.205585373726859 0.202677981556954 0.224423171596657 0.215472085136317 5 5 + 21325794 21326059 21325929.818 21324275 21326528 + gene protein_coding_gene TRUE TRUE AT5G52510.1 scarecrow-like transcription factor 8 (SCL8) similar to SCL1 (SCARECROW-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G21450.1); similar to GRAS10 [Solanum lycopersicum] (GB:ABD72965.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 1.09996665498651 9.4125214611671 1.81211681479502e-06 7.17578818800921e-05 13.5596524957810 13.9300541453936 1.09996665498651 0.139547054072091 AT5G27450_at 3.28175803316904 2.89164934840311 3.23163485437714 3.64564272395348 3.27376947599507 3.87455685535421 2.75530413406516 2.99183563806684 3.21905402524949 3.49784243623751 4.84256520147314 6.14125820125881 5.02010520492012 4.5583027715759 5.80424883912675 4.9638213376848 4.75249403483594 4.37305684003747 3.19069276966447 0.280079973026404 0.282370406173202 0.274321050813131 0.277985417768508 0.273996677717199 0.276740898125571 0.278788753847803 0.273996677717199 0.274913106533458 0.273996677717199 0.277762148470712 0.281900163308491 0.273996677717199 0.279702196266424 0.281476094390963 0.280926549259983 0.279160340105603 0.273996677717199 0.274399789452030 5 5|0 +|/ 9692382 9692915 9692600.6 9690610 9693231 + gene protein_coding_gene TRUE TRUE AT5G27450.1|AT5G27450.2 MK/MVK; mevalonate kinase Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway. Identical to Mevalonate kinase (EC 2.7.1.36) (MK) [Arabidopsis Thaliana] (GB:P46086;GB:Q9STB1); similar to mevalonate kinase [Hevea brasiliensis] (GB:AAL18925.1); contains InterPro domain GHMP kinase, C terminal; (InterPro:IPR013750); contains InterPro domain Mevalonate kinase; (InterPro:IPR006205); contains InterPro domain GHMP kinase, ATP-binding region; (InterPro:IPR006203); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase; (InterPro:IPR006204); contains InterPro domain Mevalonate kinase/phosphomevalonate kinase; (InterPro:IPR012197) 1.14035799957045 9.4124387768723 1.81226869145517e-06 7.17578818800921e-05 13.5595747866191 7.42302453171364 1.14035799957045 0.148915517070938 AT5G03180_at 3.68346524398332 3.38280297226960 5.14443185246458 4.93180212513904 5.94045098259164 5.10627966643723 4.77054413329581 4.4022816988956 4.13605372631487 4.06358606395921 5.25835549329375 5.21665693888414 5.69813554574541 5.31669395014735 5.37836948089892 5.64910335497557 5.83632714875577 5.4268756108633 4.46972476442455 0.213975734533104 0.227257742634492 0.215729118885036 0.223655617555417 0.220544028698752 0.212634138536555 0.223983399522195 0.215945131808273 0.219727608732879 0.226635495037489 0.214343335185843 0.213252200261171 0.213240893473315 0.217053154586066 0.216026491838429 0.213541685152943 0.241350533786182 0.212634138536555 0.217228180511491 5 5 - 754272 754933 754588.273 753950 756645 - gene protein_coding_gene TRUE TRUE AT5G03180.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G09760.1); similar to Os06g0677300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058355.1); similar to zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45521.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.23520540837984 9.40640871714757 1.82338215893577e-06 7.21320523687984e-05 13.5539056324316 9.5181004387238 1.23520540837984 0.17018130949069 AT5G17910_at 5.81621459842178 6.07588636129115 6.78692954663696 7.0614552653017 7.39622036044809 6.5865592542182 5.46317518579203 6.03637258636473 6.54943536464359 5.87857406344843 7.84407530932188 7.9188527900921 7.64723601309624 7.65098186279186 7.31369212603881 7.61155115595297 7.07723696421016 7.64944354137243 5.8807288005918 0.189646351589216 0.192682730533927 0.204542876353401 0.197034176614252 0.201999825085523 0.201057305109186 0.189870431166004 0.192584402196394 0.190880898216842 0.199217517828055 0.192201409749231 0.189748840713372 0.189030452030247 0.202049135863638 0.191984227239736 0.191396133229207 0.196870328041589 0.194112600057024 0.193622288708328 5 5 + 5931711 5932217 5931941.455 5927404 5932724 + gene protein_coding_gene TRUE TRUE AT5G17910.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29620.1); similar to hypothetical protein [Glycine max] (GB:BAB41198.1) 1.29804995057438 9.40387463688378 1.82807453169856e-06 7.22517570652227e-05 13.5515220860406 13.2488748764364 1.29804995057438 0.183707136854814 AT5G64370_at 9.50784773293863 9.72256471969678 10.2776120687843 10.2851870652618 10.6947927408397 10.1480752144322 8.8790811106734 8.81922099988688 9.03315963095212 8.51927672859159 9.52651655925601 9.45345223031909 9.5328714443571 9.7718557649219 9.01839995144752 9.65908261462622 9.11574079779824 9.82289816664644 8.55905430422645 0.100329753533419 0.0986942869401104 0.093798743451409 0.098561264827007 0.0983888792568437 0.100030809186037 0.0975504320348261 0.098125495305189 0.109796948259844 0.0988276126264584 0.096469909967366 0.0950387907374153 0.096282832779316 0.097444490863368 0.0997053259142673 0.0949434819905465 0.106390721497610 0.0980355402575046 0.103342755296634 5 5 + 25757592 25758200 25757921.182 25756404 25758438 + gene protein_coding_gene TRUE TRUE AT5G64370.1 BETA-UP (BETA-UREIDOPROPIONASE); beta-ureidopropionase PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. similar to NLP1 (NITRILASE-LIKE PROTEIN 1), hydrolase, acting on carbon-nitrogen (but not peptide) bonds [Arabidopsis thaliana] (TAIR:AT2G27450.2); similar to Os07g0485100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059656.1); similar to Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Medicago truncatula] (GB:ABE93097.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010) 0.951505050722707 9.40187911880016 1.83177886098165e-06 7.2264312339132e-05 13.5496446368773 18.8875139127783 0.951505050722707 0.102182009185616 AT5G09670_at 7.23227322601838 7.63670356285825 8.54354100701674 8.47517230316231 8.78034758428937 8.49004490391083 7.33385736251698 7.0396938334383 7.9903457878698 8.07034710874517 8.81319623589454 8.5538728038372 8.98814604002223 9.04426743589803 8.15440728870676 8.91582942732075 8.624792586139 8.63616502100796 8.19479787994675 0.165749648807486 0.168004777037557 0.156533524291184 0.160639200278325 0.156299661807502 0.156180168677361 0.162764187336623 0.183659004789788 0.178158920131339 0.158866265220660 0.153560920589584 0.155567248682745 0.153115716358765 0.155455316355231 0.155238359044769 0.152914890693401 0.179025193538428 0.154275603319675 0.157576856346600 5 5 - 2996110 2996679 2996360.909 2995913 2998933 - gene protein_coding_gene TRUE TRUE AT5G09670.1|AT5G09670.2 loricrin-related similar to loricrin-related [Arabidopsis thaliana] (TAIR:AT5G64550.1); similar to Os04g0458200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052976.1); similar to B0414F07.3 [Oryza sativa (indica cultivar-group)] (GB:CAH68133.1); similar to OSJNBa0036B21.17 [Oryza sativa (japonica cultivar-group)] (GB:CAE03375.1) 0.94640773302645 9.4015179969013 1.83245008978670e-06 7.2264312339132e-05 13.5493048370147 16.3422033214217 0.94640773302645 0.100765676233752 AT5G15520_at 4.42372150066118 4.77027179097486 5.20027821479473 4.92846566297076 5.34631401353846 5.38490188232145 4.69152954778325 4.9413033166402 4.19234883278448 4.26279838354093 5.64170683117969 6.08389274359873 5.4418394689332 5.4683481206331 5.59159928475798 5.46098588391601 5.37065522935643 5.14536774867565 4.23206534157874 0.229357776994444 0.237601348288832 0.229188993269181 0.238892716562326 0.234958344395408 0.231945700326905 0.228083216240947 0.233509212507613 0.254119394103744 0.237554185936524 0.229183969312102 0.232300456388583 0.243407487935034 0.239202205525908 0.241327857668614 0.228083216240947 0.239574530216499 0.243038111630144 0.244107663612485 5 5|0 -|/ 5037245 5038095 5037614.7 5037024 5038175 - gene protein_coding_gene TRUE TRUE AT5G15520.1 40S ribosomal protein S19 (RPS19B) Identical to 40S ribosomal protein S19-2 (RPS19B) [Arabidopsis Thaliana] (GB:Q9LF30); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to 40S ribosomal protein S19-like [Solanum tuberosum] (GB:ABB87116.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) 0.902380982819057 9.40065879716275 1.83404818419664e-06 7.2264312339132e-05 13.548496312948 9.83815837446864 0.902380982819057 0.0878761846785563 AT5G58590_at 7.58960595986597 7.42910462050343 8.48831583804248 8.54967194057152 8.73697408456551 8.61110458667042 7.55319649766488 7.86867473572001 7.51177108892448 7.85554785540343 8.72038790621519 8.31245019168231 8.73445675805518 8.38106306461564 8.37434761202425 8.56715887742475 8.86466168645941 8.31373064269103 8.1681570901717 0.169234389456936 0.166171160713343 0.173491452296219 0.165395896746284 0.164456648675616 0.184056260337215 0.169850389496112 0.169437474463766 0.180629637707484 0.162429065004153 0.168120959282053 0.160131601067777 0.166150250481714 0.167281789074796 0.159793275490822 0.166216270801874 0.168328125617008 0.163975668434057 0.174246985327995 5 0|5 /|- 23697679 23698357 23698119.333 23697305 23699024 - gene protein_coding_gene TRUE TRUE AT5G58590.1 RANBP1 (RAN BINDING PROTEIN 1) Encodes a Ran-binding protein 1 homolog (RanBP1). Identical to Ran-binding protein 1 homolog c (RANBP1C) [Arabidopsis Thaliana] (GB:P92985;GB:Q9LUZ8); similar to SIRANBP (Ran-binding protein 1a), Ran GTPase binding [Arabidopsis thaliana] (TAIR:AT1G07140.1); similar to unknown [Brassica rapa] (GB:ABB97039.1); contains InterPro domain RanBP1; (InterPro:IPR000156); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) 0.837372286626676 9.40011571821345 1.83505907969478e-06 7.2264312339132e-05 13.5479852250271 16.2926764182318 0.837372286626676 0.0658733664225974 AT5G60450_at 5.36667425523177 4.9983313911125 4.75480363593782 4.87837099188552 6.52327390895543 6.2041847361235 3.92422074126895 3.56686922423816 3.17160367643447 3.70894709396836 4.31051566650131 4.38915836544173 4.4129778591232 4.82137869173487 4.47537934525694 4.01638911649469 4.68283404138701 3.69802505793052 3.7455538952016 0.221523282424076 0.221411383245846 0.240472035826523 0.224200457517594 0.238090184210719 0.256539067198487 0.221501080950872 0.227604577768335 0.232173800285490 0.229567090090501 0.221411383245846 0.221411383245846 0.22917636077175 0.229860181923805 0.229801613761317 0.222884716299965 0.235192070744139 0.238556656141147 0.223215823571293 5 5|0 -|/ 24325789 24326535 24326177.9 24325548 24329924 - gene protein_coding_gene TRUE TRUE AT5G60450.1 ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. Identical to Auxin response factor 4 (ARF4) [Arabidopsis Thaliana] (GB:Q9ZTX9); similar to ETT (ETTIN), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33860.1); similar to auxin response factor 4 [Lycopersicon esculentum] (GB:ABC69715.1); similar to Transcriptional factor B3 [Medicago truncatula] (GB:ABD33064.1); similar to Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation [Medicago truncatula] (GB:ABE89541.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525) 0.967465897355853 9.39578044895302 1.84315051205153e-06 7.25170868125036e-05 13.5439042265603 8.9735246888535 0.967465897355853 0.106743079954546 AT5G16220_at 6.62600256661711 7.35682858035089 7.60167923215436 7.78096468501555 8.15692072447396 8.0583222024936 6.99120767573633 7.08386063561813 6.5773783179933 6.12338075548462 7.59790466022878 7.4055287458798 7.64282531443255 6.9942279149362 7.63162659398043 7.35051996094435 7.18757346215014 7.64408417969821 5.84900104871155 0.185430327425072 0.180488773175089 0.183040283737109 0.177361284205739 0.190554202230216 0.182311802728525 0.187044610887334 0.182776318210126 0.194516257049991 0.194057166928946 0.180245400206486 0.177572946093520 0.183112033234707 0.182880334794066 0.17791497231248 0.177667127475190 0.180339269798914 0.178151078542446 0.198079992615737 5 5 - 5298632 5299154 5298926.909 5298306 5300613 - gene protein_coding_gene TRUE TRUE AT5G16220.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G01190.1); similar to Os01g0139200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041976.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61300.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 1.06676491321095 9.38758289259499 1.85855653323565e-06 7.30569279036441e-05 13.5361820950437 14.2644931518547 1.06676491321095 0.132311147035832 AT5G13800_at 9.69812997557604 9.41017055593946 10.6914720039993 10.5917284675118 10.7520186001379 10.5753422205353 9.44508628294682 9.06290056525894 9.17868861351009 9.19824609154534 9.6998816895489 8.9573109222658 9.82519958900163 9.77128518674568 9.09105491257896 10.0169342107860 10.0549463339595 9.60607260443664 8.80625176864348 0.117805282388818 0.118840815253853 0.116759702816460 0.117422224862346 0.124837939194774 0.126667280406676 0.117979155290286 0.121398273139394 0.122853229517346 0.125520265948541 0.116595470235003 0.124203754454623 0.117323861122553 0.121433219858641 0.123768083871407 0.120009229492701 0.11939992153932 0.127018821953092 0.1255618298541 5 5|0 -|/ 4452235 4452774 4452534.222 4451840 4454624 - gene protein_coding_gene TRUE TRUE AT5G13800.1|AT5G13800.2 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G36530.2); similar to Os06g0354700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057593.1); similar to hydrolase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35415.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.907671000690747 9.38514586676756 1.86316342366658e-06 7.31716787212278e-05 13.5338850498457 19.3728050035207 0.907671000690747 0.0899467936323361 AT5G06360_at 8.82569840969644 9.07076423124948 9.460954856714 9.50573104129368 9.96303010461494 9.7714179375246 8.71359301811422 8.91128898771598 6.80754318600809 8.03676231032939 8.69296847547933 8.89106714855461 8.85647862463717 8.20367147952445 8.732451922513 8.61722616603125 8.41596353483187 8.31975849317034 8.32502186051251 0.147542051850460 0.147187132793757 0.150902294302163 0.147245727247670 0.147344076957328 0.147087723889857 0.146849262090397 0.146642661215193 0.225194663588845 0.144538428489937 0.147275979577697 0.143248871912952 0.150654985010064 0.162387733475707 0.144535805014813 0.146278586532185 0.162867154972364 0.161140965383485 0.152416894454507 5 5|0 +|/ 1945432 1946325 1945942.6 1944769 1946744 + gene protein_coding_gene TRUE TRUE AT5G06360.1 ribosomal protein S8e family protein similar to Os07g0673100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060605.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57977.1); contains InterPro domain Ribosomal protein S8E; (InterPro:IPR001047) 0.83151821749277 9.38159128818722 1.86990512237311e-06 7.33699859094283e-05 13.5305335273597 17.4349634981368 0.83151821749277 0.0642545890381939 AT5G04470_at 4.13339999674675 5.30186383133468 5.68393104508471 5.91687265128523 6.56399558390834 6.28383081643326 5.41861516974977 5.85625911372466 3.79738516617916 4.61482853214373 6.53468220876885 6.89838190124282 6.45358965877684 6.41416693066022 6.20066609417492 7.07352443407925 6.0166582197249 6.1781225211122 4.83280829253919 0.296341861948852 0.287580901003732 0.293812746035121 0.287580901003732 0.291353302512864 0.315078043466475 0.300705976143923 0.287580901003732 0.293709935279491 0.287580901003732 0.299438024135654 0.287580901003732 0.291607704930105 0.300802566606669 0.287660193858776 0.299341527929058 0.311486961920057 0.293242657335909 0.288795027624489 5 5 - 1266901 1267234 1267014.273 1266626 1267417 - gene protein_coding_gene TRUE TRUE AT5G04470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10525.1) 1.49541983103453 9.3787022023489 1.87540411854567e-06 7.35192183181639e-05 13.5278085054999 11.0879616892109 1.49541983103453 0.224944041059973 AT5G25770_at 8.47426427967387 8.46967093200657 9.5630010989992 9.46843219553898 9.80526082377636 9.12718525852015 6.48382127481047 6.53310565126335 6.81533443346505 6.51522002739673 6.36797789450064 6.7756573244694 6.91296833442833 7.40830034031163 5.56090069800205 7.42489003394003 6.69999301850592 6.20946315402587 6.61482465997889 0.223432013282643 0.218459853733147 0.224652430540337 0.219397817133033 0.216160165482314 0.236129447342838 0.232035336614143 0.214525629016585 0.219335614184500 0.222106447109190 0.221024168121438 0.219618748583656 0.215463817856795 0.216507307185347 0.217998935004564 0.217745779909123 0.263325180529341 0.220668346917169 0.215039843606776 5 5|0 -|/ 8969504 8970256 8969835.375 8969218 8972049 - gene protein_coding_gene TRUE TRUE AT5G25770.1|AT5G25770.2|AT5G25770.3 similar to Os06g0163200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056894.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67646.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 1.0111567262981 9.37644545410498 1.87971174080630e-06 7.36215192981424e-05 13.5256793034870 15.1498319676836 1.0111567262981 0.118789112862396 AT5G20510_at 2.39972675543840 2.57049088509378 3.24956211278914 3.50508141361365 4.83330214128578 4.25653266814009 2.55332017687658 2.29316682478306 2.29605489820000 3.17927401212035 3.20264122327408 3.26556580215748 3.94025249834296 3.06707380967321 3.33576559416200 3.67856048384936 3.32036252334326 2.88959054058477 2.9230538767022 0.308212225224979 0.306536240986623 0.298819548795986 0.298819548795986 0.309961180830886 0.307065053283273 0.305142994605043 0.298819548795986 0.301650258266846 0.308170113334413 0.298819548795986 0.29966845244241 0.306882317912829 0.298819548795986 0.299814189253117 0.298819548795986 0.305817686847261 0.30359787903837 0.298819548795986 5 5 - 6940093 6941914 6941327.143 6939815 6942910 - gene protein_coding_gene TRUE TRUE AT5G20510.1 PHD finger family protein similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G42790.1); similar to PHD2 [Glycine max] (GB:ABI97241.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 1.02247952691254 9.37430455485139 1.88380815122264e-06 7.37153706803457e-05 13.5236589091531 6.27611661646801 1.02247952691254 0.121729323915275 AT5G07470_at 9.92903317479836 10.0853604651330 10.8273992168410 10.8920310591206 10.9403334260102 10.5319195874214 9.75858929522742 9.87250979040682 9.2901215509132 9.44215164736357 10.2276557760168 10.0001451504710 10.2873036557336 10.1664042819303 10.1000122288231 10.2755799068519 10.1076814199038 10.1074036261415 9.17324339606384 0.0821689115523906 0.0820543356084178 0.084704137363842 0.083464039803833 0.0803530268392237 0.0889273748274713 0.0818963050525259 0.0810489578961716 0.0843473506000845 0.0865192054817091 0.0801106326928152 0.0801106326928152 0.0801106326928152 0.0818901045810287 0.0814819329557876 0.0801106326928152 0.0890647326172895 0.0828183403944323 0.085246562408645 5 5 - 2362785 2364220 2363756.091 2362571 2364375 - gene protein_coding_gene TRUE TRUE AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins similar to PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G61640.1); similar to peptide methionine sulfoxide reductase [Capsella rubella] (GB:AAR15455.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 0.871866015955352 9.372001140806 1.88822633086961e-06 7.37602846506045e-05 13.5214846104342 20.0850780621270 0.871866015955352 0.0790000206750142 AT5G42750_at 4.84170720029412 5.22988425081527 6.57980778033224 6.34901881278811 6.90025697889849 6.26999841332091 4.82977673167064 5.06246860708405 5.89147669163041 5.05335023542631 6.01235330676864 6.01875581852929 6.13142005262479 5.61536606470057 6.41112426726872 7.20288296154844 6.57334505962487 5.94736429115458 5.78922348981232 0.205306277381175 0.203083024997003 0.217725259320179 0.199667016326296 0.203446999688563 0.217625105000753 0.210931727314669 0.203428914817530 0.209686849378967 0.208565268008361 0.208526938936725 0.200391634300979 0.199667016326296 0.227796950611794 0.200287041354282 0.200116461572421 0.219736971323135 0.204865173034422 0.204147051521740 5 5 - 17160277 17160831 17160511.909 17160048 17161388 - gene protein_coding_gene TRUE TRUE AT5G42750.1 Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26230.1); similar to BRI1-KD interacting protein 119 [Oryza sativa (japonica cultivar-group)] (GB:BAD38522.1) 1.09743548551170 9.37117031552363 1.88982269334858e-06 7.37602846506045e-05 13.5207002194972 11.6664114886007 1.09743548551170 0.140090538918466 AT5G53890_at 5.54035675623049 6.35663217679926 6.23778220577576 7.00656514072357 7.72151134328069 7.57561824566392 5.67727247407208 5.75796340094683 4.93453110110907 5.52416484373929 6.85377813613556 6.69456171564812 6.46982330771763 6.5371308300817 6.46249821028942 7.30867400462976 7.12011936430872 6.90262847746411 5.71143086055807 0.208578536918311 0.214434889888741 0.205804568203091 0.209180259715365 0.211085669707405 0.206882898265107 0.205733652213271 0.207727135539460 0.214223002418913 0.207917579130102 0.206617966101064 0.208543783272364 0.207447918396791 0.204534724193796 0.215775265950228 0.204316728410340 0.214059884199991 0.204316728410340 0.211516071445345 5 5 + 21897034 21897536 21897256.364 21894087 21897687 + gene protein_coding_gene TRUE TRUE AT5G53890.1 leucine-rich repeat transmembrane protein kinase, putative similar to ATPSKR1 (PHYTOSULFOKIN RECEPTOR 1), ATP binding / peptide receptor/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G02220.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G72300.1); similar to putative phytosulfokine receptor [Oryza sativa (japonica cultivar-group)] (GB:BAC20742.1); similar to putative phytosulfokine receptor precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD23737.1); similar to Phytosulfokine receptor precursor (Phytosulfokine LRR receptor kinase) (GB:Q8LPB4); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.35296125958219 9.37104707928143 1.89005960625884e-06 7.37602846506045e-05 13.5205838646867 12.5760597300632 1.35296125958219 0.196180844545666 AT5G46470_at 5.09993153103878 4.78651996830382 6.80903610601329 6.54056139386181 6.8245809011197 6.0978997624036 6.17056498570663 5.32581931891028 5.02027242817157 4.86849346167095 6.66365947054786 6.4686261337095 6.7566393203196 6.63946859732625 6.18906813992487 6.92027681385764 6.48361225878258 6.3159136271645 5.05164928610051 0.179353968748093 0.176280713868556 0.179147037861248 0.179598065449567 0.175029226629829 0.18081289308251 0.173437008109232 0.178454045896142 0.187243049184357 0.179437924955887 0.172443834377211 0.173447134601042 0.175667629813033 0.187396439181142 0.174972391876559 0.172268853769603 0.18520679757964 0.178869061208382 0.176553712673752 5 5 + 18863442 18866785 18864968.05 18859928 18866968 + gene protein_coding_gene TRUE TRUE AT5G46470.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.39841512154141 9.36854747088462 1.89487188302947e-06 7.38815854785921e-05 13.5182234886623 11.7242624645123 1.39841512154141 0.205634253040693 AT5G09460_at 6.4906811838371 6.14218363776973 7.2863857245886 6.62928449212895 7.37553995797322 7.32831756679297 6.69277181294565 6.31234143147377 6.27601598681121 6.10543406725492 7.71869774710126 8.3492188376444 7.57414060090608 8.14270527442758 7.40055533003104 8.02210878551806 7.74666084708096 7.26767136026518 6.48872500677598 0.173324445447216 0.166644012875881 0.176402254293664 0.183066809518442 0.162038642328107 0.163509763139286 0.174857506482597 0.163689963376740 0.163457130604763 0.171592343572063 0.172329554187224 0.170233982372158 0.160751922815420 0.160751922815420 0.170510907286995 0.169940287881612 0.176029944624520 0.165688461240464 0.170864899712118 5 5 - 2944506 2945011 2944694.273 2944438 2945418 - gene protein_coding_gene TRUE TRUE AT5G09460.1 transcription factor/ transcription regulator similar to SAC51 (SUPPRESSOR OF ACAULIS 51), transcription factor/ transcription regulator [Arabidopsis thaliana] (TAIR:AT5G64340.1); similar to Os03g0391700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050282.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 1.11652445656108 9.36233882036016 1.90688243042199e-06 7.42830787558002e-05 13.5123578312389 13.8160773266817 1.11652445656108 0.144807547255091 AT5G18960_at 5.02909499715716 5.25490133534086 5.25989576395757 5.82210645649739 6.26004110301966 6.4351645207556 4.54012377655497 4.71738490628493 4.60178524180791 4.5124486632453 5.26411940765006 5.23806941315978 5.69385997058325 5.51324484662493 5.54379399230628 5.2931588211053 5.46182161396763 5.29340482936071 4.37000104084536 0.224385460844874 0.221048552596066 0.214802700659946 0.212602887934380 0.211953299651790 0.220137141147472 0.213752192448578 0.217480388208308 0.229487165040821 0.213574426950213 0.214545919549365 0.211953299651790 0.217672561141778 0.213973303546664 0.218626109753405 0.216578696599509 0.225483986293422 0.216792010797717 0.223460572727437 5 5 + 6332581 6332925 6332756.727 6330381 6333073 + gene protein_coding_gene TRUE TRUE AT5G18960.1 FRS12 (FAR1-RELATED SEQUENCE 12); zinc ion binding similar to FRS7 (FAR1-RELATED SEQUENCE 7), zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G06250.1); similar to FAR1; Zinc finger, SWIM-type [Medicago truncatula] (GB:ABE87107.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1; (InterPro:IPR004330) 0.988432418550813 9.35915440888299 1.91307463364118e-06 7.44573996371895e-05 13.5093477691019 10.3685536543515 0.988432418550813 0.113368516379189 AT5G15050_at 7.80132890583607 8.01581852864875 8.50831092774248 8.41575861244125 8.70364746288433 8.82579330716919 8.53610100102686 8.24275858894156 8.07162006900427 7.72691649315901 9.3218967374039 9.1631046600528 8.9785833785779 9.10005615359627 9.40500819649397 9.01107719641096 8.71820638219835 9.06825802436378 7.84275213147706 0.141178706981176 0.133884736316414 0.132552755108024 0.142476063997770 0.141925882410209 0.143341219884200 0.141116592635770 0.145490787385747 0.15668594637486 0.145130715492706 0.148234008665699 0.134779286132629 0.133361664095482 0.140419508776919 0.144231554959678 0.136214349530416 0.136811640591266 0.137761905357972 0.142467008990266 5 5|0 -|/ 4871825 4872502 4872058.5 4871642 4873601 - gene protein_coding_gene TRUE TRUE AT5G15050.1 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G39990.1); similar to BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Ae (GB:CAH05144.1); similar to Os12g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067391.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) 0.839860049018232 9.35724676021102 1.91679456542318e-06 7.45352726371064e-05 13.5075440552638 16.8692913696783 0.839860049018232 0.068250510046729 AT5G27720_at 9.26288572992717 9.45657198394665 9.91671598459513 10.0629253376034 10.0779068852991 9.78875366480726 8.99669731148496 9.1278283054553 8.95868757879695 8.48902930018495 9.7840236001748 9.78636647460609 9.4574124269574 9.77287059873442 9.58757348402224 9.63979407674764 9.65439218096124 9.73503481636984 8.78269021699629 0.131968149886209 0.13538350821793 0.137987180239169 0.140500928492675 0.142195814104382 0.143876111078747 0.131968149886209 0.133727435541742 0.142850710770937 0.144236292816751 0.135271062305641 0.133403527685213 0.136688600240111 0.142086444583571 0.131968149886209 0.137673733739995 0.143644935583817 0.139048193353045 0.146148253812064 5 5|0 +|/ 9816008 9817126 9816628.429 9815560 9817603 + gene protein_coding_gene TRUE TRUE AT5G27720.1 EMB1644 (EMBRYO DEFECTIVE 1644) similar to SMD3 (SNRNP CORE PROTEIN SMD3) [Arabidopsis thaliana] (TAIR:AT1G76300.1); similar to Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core [Medicago truncatula] (GB:ABE94505.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649) 0.842147030350848 9.35544991392105 1.92030560510261e-06 7.4604890510779e-05 13.5058447569329 18.7966118950471 0.842147030350848 0.0691561736074711 AT5G42620_at 3.97395179191567 3.86421435876672 4.69721867952572 5.06886513506872 5.82610501070961 4.98754612474466 4.42253192084483 4.63561953837758 3.3292499756223 2.77606265704305 4.54641061055466 4.52528287772901 5.10951769226452 4.63574900420825 4.64150433347438 4.81983711567994 4.50123055171071 4.65072888869351 3.49452418361478 0.232236594621948 0.226341817271471 0.225870480261594 0.231289138315252 0.221906078724515 0.234488222885345 0.226526669062426 0.223884514014194 0.251748509043692 0.238183608792609 0.231233390173347 0.222964048728155 0.226660861400446 0.225035746962046 0.225785537158349 0.224835705450189 0.225668275065072 0.222576438208978 0.228890721351351 5 5|0 +|/ 17085871 17087078 17086311.9 17083547 17088569 + gene protein_coding_gene TRUE TRUE AT5G42620.1 metalloendopeptidase/ metallopeptidase/ zinc ion binding similar to Os03g0731500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051165.1); similar to putative major surface like glycoprotein [Trifolium pratense] (GB:BAE71247.1); contains InterPro domain Peptidase M, neutral zinc metallopeptidases, zinc-binding site; (InterPro:IPR006025); contains InterPro domain EGF-like, type 3; (InterPro:IPR000742); contains InterPro domain EGF-like region; (InterPro:IPR013032); contains InterPro domain Peptidase M8, leishmanolysin; (InterPro:IPR001577); contains InterPro domain EGF, extracellular; (InterPro:IPR013111) 1.19984568194932 9.34921844504532 1.93253602972559e-06 7.50128331890982e-05 13.4999489529808 8.62387068985223 1.19984568194932 0.164060086462216 AT5G62540_at 8.5859536395157 8.42548159436197 9.6441503277011 9.51672298611952 9.8455310923698 9.478217553669 9.13863964678285 9.14527271097762 8.53340595229092 8.82470683133217 9.4132929398157 9.55678686538 9.75013466457033 9.52093569418163 9.44622901817154 9.42172157605078 9.72981363174617 9.64958433286168 8.60959725914308 0.129297603161502 0.121228924712891 0.124357455170847 0.123033621494693 0.124195974123573 0.12623896297828 0.123637721310006 0.119561748269492 0.131831685448286 0.124903611384193 0.124264730928645 0.118323599984903 0.118323599984903 0.122013884994506 0.12632468345796 0.118323599984903 0.119891192012986 0.123210833124233 0.125648269427858 5 5|0 +|/ 25121948 25122662 25122395.375 25121160 25122845 + gene protein_coding_gene TRUE TRUE AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 29); ubiquitin-protein ligase Identical to Ubiquitin-conjugating enzyme E2-17 kDa 3 (EC 6.3.2.19) (Ubiquitin- protein ligase 3) (Ubiquitin carrier protein 3) (UBC3) [Arabidopsis Thaliana] (GB:P42746); similar to ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G02760.1); similar to ubiquitin carrier protein [Populus tomentosa] (GB:AAV84587.1); similar to Os03g0791800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051522.1); similar to Os05g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054819.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.851238792406913 9.34447487841386 1.94190277995048e-06 7.5308989852609e-05 13.4954581635889 18.3309790379052 0.851238792406913 0.0727966405472471 AT5G01550_at 3.9056587740084 4.18931401847746 6.01304517635589 5.59201713480307 4.91742941343073 4.82292297188775 3.19782387915125 3.23395223008746 3.44734107103295 3.30896042090868 3.56610083427651 3.1583251440799 3.63743721216082 3.19451855347306 3.24307418843394 3.09273379966858 3.98657229635329 3.52001868486834 3.21757405318186 0.224497667493583 0.216555604041172 0.228473236973897 0.227559902355782 0.224175219307660 0.217552291532663 0.210076316377659 0.219922851172325 0.213693782902318 0.216641855174789 0.217233983832634 0.221475937426795 0.215002997232300 0.211604579019661 0.211827867745333 0.214999456974489 0.210645776501341 0.213256814713697 0.212982089865229 5 5 - 214533 215010 214792.909 214516 216582 - gene protein_coding_gene TRUE TRUE AT5G01550.1 lectin protein kinase, putative similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08870.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01540.1); similar to receptor lectin protein kinase-like [Cucumis melo] (GB:AAU04770.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.902444428072346 9.34348610303793 1.94386143021177e-06 7.53175801873346e-05 13.4945217800148 7.85875683521132 0.902444428072346 0.0895817654802077 AT5G56610_at 4.85584578428449 4.77900127117552 6.18531599164999 5.94183966143723 5.46035854484948 4.69107176137291 3.58961251717873 2.98428136811912 3.34428968839525 2.98527374078803 4.25703058121483 4.49593900360638 4.10776545044274 3.56050691233625 4.12362428057386 3.66082065366466 4.38170546849435 4.1085807163516 2.99017842865956 0.277034969622722 0.253375312121332 0.250708576011192 0.253150044389228 0.255154878791699 0.255499049614315 0.253283361752143 0.258891173007985 0.284342700387193 0.262472297444761 0.270598221854118 0.251633483106822 0.246935883551551 0.267919492240131 0.259023271506122 0.246935883551551 0.249332906324423 0.256138832217012 0.250909386404902 5 5|0 +|/ 22934076 22935108 22934785.25 22933936 22935564 + gene protein_coding_gene TRUE TRUE AT5G56610.1|AT5G56610.2 dual specificity protein phosphatase family protein|protein tyrosine/serine/threonine phosphatase similar to dual specificity protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G35680.1); similar to dual specificity protein phosphatase family protein [Musa balbisiana] (GB:ABF70116.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387)|similar to dual specificity protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G35680.1); similar to Os01g0739200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044194.1); similar to dual specificity protein phosphatase family protein [Musa balbisiana] (GB:ABF70116.1); similar to Os05g0524200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056088.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387) 1.24893863434629 9.33980004313842 1.95118198848074e-06 7.55337241751745e-05 13.4910301238941 8.4077044888167 1.24893863434629 0.175068871975531 AT5G35160_at 7.06865687653261 7.20344643106131 7.73301512346773 7.78252501332286 8.37153588677076 8.09844939434869 7.36690155228368 7.88390252144572 7.24139464473066 6.87555721978996 8.58860696732837 8.72572126268348 8.3485682581578 8.30244325011854 7.91016876333397 8.17264777918689 8.41443994550575 8.13878302941226 6.99290604679781 0.22023071133918 0.199942039183086 0.205479345007536 0.205133346972193 0.199303723051211 0.217968584078972 0.216172489203448 0.209492812121027 0.229076419759857 0.210113199066037 0.214561830086704 0.199303723051211 0.207900589148111 0.201094906097911 0.209331431555361 0.199303723051211 0.21181650485256 0.211691346119138 0.206138329407840 5 5 + 13433638 13434112 13433916.636 13432184 13434435 + gene protein_coding_gene TRUE TRUE AT5G35160.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT4G12650.1); similar to endosomal protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD01346.1); similar to Os02g0722300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047965.1); similar to Os02g0797700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048399.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) 0.952103806169875 9.33663984545067 1.95748197931955e-06 7.56865972483892e-05 13.4880354556256 15.3694499552735 0.952103806169875 0.104190648174117 AT5G53060_at 3.41829811930376 3.69002068583177 4.71678376781857 4.54683712054103 5.25162348579758 4.64849015559417 3.79773808623843 3.60327459247633 3.08763325784922 3.45252728457811 4.26986439182257 4.45642409823832 4.36766391680606 4.19414601830886 4.13728699962947 5.00516835091535 3.95178211533052 4.08850999358153 3.73977622285335 0.233244390109018 0.242308115855221 0.237220386952564 0.23778382701238 0.231502780087673 0.236152042176719 0.231832865580216 0.233968111925159 0.244373769764737 0.239032450860277 0.236226404181880 0.233707139546229 0.235763202237179 0.241536172423002 0.243005189629552 0.237068642646911 0.238421098546717 0.243969996515361 0.240247879070088 5 5 + 21534395 21535265 21534828.5 21532252 21535663 + gene protein_coding_gene TRUE TRUE AT5G53060.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G15270.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE93137.1); similar to Os06g0342500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057572.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, prokaryotic type; (InterPro:IPR009019); contains InterPro domain KH, type 1; (InterPro:IPR004088) 1.02290545431373 9.33606901690252 1.95862230058413e-06 7.56865972483892e-05 13.4874944144819 8.0768839137032 1.02290545431373 0.122893290068405 AT5G43310_at 4.6912229137558 5.27808029668243 5.6251112529815 5.82365013486136 7.12912246046909 6.43998585400482 4.69161025736549 4.39858349955175 6.46355099682757 6.6048849153513 8.06241922482422 7.5768313621447 7.40593036224909 7.28395568779069 6.94884851918751 6.90190164200261 6.32848111377497 6.89453742760408 5.62588466553249 0.280570501870349 0.276845597858436 0.273882637408808 0.279406609912168 0.271288441008259 0.274201198029078 0.266569094186870 0.287468938481198 0.274513570821925 0.260654802146851 0.265851229301863 0.266158072731473 0.265337434353329 0.26082774350927 0.279835223841765 0.264650624730717 0.282561462719521 0.272396156253491 0.260067241011475 5 5|0 -|/ 17396978 17397734 17397431.5 17396819 17402615 - gene protein_coding_gene TRUE TRUE AT5G43310.1 COP1-interacting protein-related similar to disease resistance protein (TIR class), putative [Arabidopsis thaliana] (TAIR:AT1G61100.1); similar to Os03g0861100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051978.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44760.1) 1.21675807930855 9.3350585094286 1.96064271717179e-06 7.56972054332519e-05 13.4865365538074 12.2130725137179 1.21675807930855 0.168192149034527 AT5G46790_at 5.27401445302595 5.30459080643961 5.35730757549625 5.81366571230458 6.2776764735604 6.13627614448873 5.67427987090217 5.89796061919651 5.63570628545283 5.24154378597863 7.35667147704126 7.06203873668883 7.22122299923636 7.02193669682776 6.51031068209075 7.21217826196829 7.3410640366821 6.20457640319321 5.72662666555097 0.201314691837264 0.188765790363456 0.195883372347618 0.189920761804984 0.188529404145999 0.191853400713601 0.192279150473934 0.190607724279925 0.202502470696339 0.190213230004055 0.195223083372669 0.194893993512674 0.188616095898855 0.195914227166257 0.203616984350697 0.198805113294063 0.196825569835993 0.19756698389243 0.192445518104890 5 5 - 19001344 19001850 19001678.545 19001097 19001986 - gene protein_coding_gene TRUE TRUE AT5G46790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17870.1); similar to Streptomyces cyclase/dehydrase family protein [Brassica oleracea] (GB:ABD65175.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) 0.90757218589668 9.33300567649601 1.96475412890578e-06 7.57772317183208e-05 13.4845903405177 11.9799092022819 0.90757218589668 0.0914450699666223 AT5G61010_at 8.32584132965446 8.74518076342668 9.7260103897475 9.6878724586214 9.02373064037346 8.64176094466597 7.79278316979525 8.29341555573413 7.10372733651601 6.72733970249215 8.21248643482941 7.78969967868946 8.03637521258914 8.17849450349197 6.99735723637567 8.5314523726859 7.59789229350826 7.89437182991108 6.49194315416916 0.215001205002794 0.209244312100639 0.213100498743877 0.21189508418748 0.211659280248979 0.219183507367126 0.208288081539253 0.209090036932502 0.246051998409433 0.222877021390137 0.208745450005635 0.205881347644734 0.215519845399704 0.216628102821907 0.229576851304374 0.208258780250758 0.232514358137681 0.218270690787500 0.223767046587768 5 5 + 24573187 24573730 24573450 24571067 24573975 + gene protein_coding_gene TRUE TRUE AT5G61010.1|AT5G61010.2 ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70E1 (exocyst subunit EXO70 family protein E1), protein binding [Arabidopsis thaliana] (TAIR:AT3G29400.1); similar to Os04g0382200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052606.1); similar to Os02g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046915.1); similar to leucine zipper-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB63582.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 1.05548393395023 9.3322793892313 1.96621097409431e-06 7.57772317183208e-05 13.4839016685527 16.1191258696620 1.05548393395023 0.131092042978181 AT5G22690_at 2.83610620953634 2.85086857555673 3.3630417232596 3.50173158395441 3.89757511587876 3.8451592710982 2.40722189485132 2.09721240440979 3.34618335634123 2.60235296247843 3.56691269314364 3.4862458124983 2.48686984607538 3.26737493924548 3.10177471920171 3.13437859131668 3.14590299454063 3.66323063963703 2.16720270763070 0.216704306565829 0.212837095553317 0.221085122934172 0.215334358393530 0.218427749300239 0.217697289204438 0.213811890004965 0.211380596111367 0.225184878606991 0.215017794705185 0.217913543802057 0.218101487209843 0.216056743497159 0.217668607970538 0.223322082352077 0.215100811635625 0.219125551589907 0.216717729684324 0.211380596111367 5 5 + 7544193 7544833 7544432.727 7541274 7545185 + gene protein_coding_gene TRUE TRUE AT5G22690.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46470.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.81518229488322 9.32968581403514 1.97142294140579e-06 7.59106233994615e-05 13.4814419634801 6.06828090812188 0.81518229488322 0.0595232855207372 AT5G28300_at 4.44717636286549 4.90916018682067 5.15238490215282 5.09928028498715 6.25753373364198 5.5939314770981 4.21769694841584 4.63901561399797 6.26572136992819 5.83536962021964 8.56081119573065 8.6147846089065 6.90308743400594 7.0290661515978 8.23222467515745 7.27830149527186 5.42044428626559 7.19671526766003 6.01003029060792 0.249131160113725 0.245302726461262 0.257983700675571 0.252574214159555 0.244483235016762 0.262400950771251 0.253130350159363 0.244483235016762 0.244483235016762 0.251012495789137 0.256545057857515 0.271522497605350 0.244483235016762 0.271625529267199 0.254484851337721 0.245406754068351 0.27566178884907 0.251612127767662 0.246511144999020 5 5 - 10292801 10293350 10292978.636 10292655 10295287 - gene protein_coding_gene TRUE TRUE AT5G28300.1 trihelix DNA-binding protein, putative similar to trihelix DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G76880.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17016.1); similar to Os03g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048736.1); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.16995464192546 9.32579640612232 1.97926706852896e-06 7.61450410553892e-05 13.4777519806823 11.7602573468690 1.16995464192546 0.158051737461566 AT5G19480_at 5.69865192372186 5.03832817594654 7.24182730030373 6.75242274566552 7.4093690843375 6.62659294652825 5.67763316312889 4.84196710228833 4.99186021765027 5.78753499727696 6.8414039962678 7.1523924662824 7.27076993924856 7.42749072184998 6.26772324569716 7.44349736070015 7.23851231156696 6.02484255733604 5.68596394473447 0.188992369298068 0.195910876884403 0.192153897418674 0.189654329701564 0.184906513229737 0.192545853835657 0.192087874301611 0.197710547008974 0.201853863202906 0.192062274387148 0.189366545784589 0.184906513229737 0.184906513229737 0.186969087270524 0.190160113939641 0.184906513229737 0.188257361960033 0.195292328068054 0.189609018194681 5 0|5 /|+ 6571959 6572397 6572115.8 6571503 6573527 + gene protein_coding_gene TRUE TRUE AT5G19480.1|AT5G19480.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12230.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22085.1); similar to Os12g0614000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067267.1) 1.58164197479270 9.32208081871648 1.98679224815142e-06 7.63667836198536e-05 13.4742254139282 12.3842401192847 1.58164197479270 0.243916267796203 AT5G43600_at 7.65311931990858 7.79045803667792 8.6094631148134 8.82123055111375 9.06523739703487 8.65298228216248 8.17117261039344 7.74487684608251 8.14869836568673 7.60337887233858 8.8376343879361 8.64811875039106 8.65778887337162 8.7580450733646 8.8394194194181 9.15732718198186 8.76091316057744 8.73221971653099 7.6227548605355 0.173472459078594 0.170182388348163 0.176372610199704 0.170139822567513 0.169630894002906 0.174600727465222 0.174534679875690 0.171421793873628 0.191603734044907 0.193886602860499 0.167795145734644 0.167795145734644 0.169812610332839 0.168065594835965 0.170391327058087 0.168991650341310 0.167795145734644 0.175745073480884 0.17744645157767 5 5|0 +|/ 17531261 17532460 17531781.7 17529703 17532722 + gene protein_coding_gene TRUE TRUE AT5G43600.1 N-carbamyl-L-amino acid hydrolase, putative similar to ATAAH (ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE), allantoate deiminase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT4G20070.1); similar to Peptidase M20 [Medicago truncatula] (GB:ABE83040.1); similar to amidase, hydantoinase/carbamoylase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99240.2); contains InterPro domain Peptidase M20; (InterPro:IPR002933); contains InterPro domain Amidase, hydantoinase/carbamoylase; (InterPro:IPR010158) 0.977322126970858 9.31930942477994 1.99242534838149e-06 7.64196663607366e-05 13.4715940576092 16.6088395297567 0.977322126970858 0.111535003369213 AT5G42670_at 5.58199451892188 5.74379801449175 6.69002247452299 6.53808144122175 7.00815917982903 6.90431176762133 6.27665678236151 6.52225672934796 5.2319972246031 5.43255165792956 6.06008367977233 6.71212248018445 6.64130874103873 6.28912398787345 6.43487872861527 6.78103110770399 6.51648437094832 5.67195252560612 5.86956106657736 0.207442078163213 0.213216985864906 0.213039167526549 0.224129900505607 0.205926364810218 0.208979068993140 0.216902832995513 0.209953372454909 0.219318686920607 0.211914097924405 0.207504250548924 0.205926364810218 0.208295374307441 0.218549465671792 0.219033299159197 0.208217783855443 0.229083127958638 0.208957804421205 0.215694602822736 5 5 + 17125941 17127431 17126729.455 17125490 17127983 + gene protein_coding_gene TRUE TRUE AT5G42670.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52070.1); similar to Os05g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054599.1); contains InterPro domain Agenet; (InterPro:IPR008395) 0.815485212099579 9.31890204701741 1.99325483795978e-06 7.64196663607366e-05 13.4712071960822 12.3580317064170 0.815485212099579 0.0600402594804125 AT5G60570_at 7.42956420258194 7.32266095997561 8.21744160481532 8.06449029375415 8.35692876182056 8.34844481881599 7.77293406023578 7.49669628559678 7.16555523399543 7.5613254127087 8.3705446839171 8.46700825960934 8.22239865158667 8.51447243176169 8.07542354376852 8.2156606206343 7.93821214261446 8.01217684761199 7.31858298127029 0.150624781632577 0.145771257346115 0.145771257346115 0.151190246059469 0.151947725635348 0.152584543840355 0.151488837569106 0.148198134686753 0.163927361339049 0.163238857231865 0.147448680313092 0.156161824434375 0.152590688658821 0.148208523881111 0.152899534047746 0.149039866378418 0.167103944335892 0.164161615542851 0.153393781234067 5 5 + 24366599 24366978 24366786.455 24365939 24367266 + gene protein_coding_gene TRUE TRUE AT5G60570.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G26930.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE79891.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.809930882200255 9.3188034029677 1.99345575012129e-06 7.64196663607366e-05 13.4711135172762 15.6638826352893 0.809930882200255 0.0577083963824972 AT5G18440_at 4.85720003716185 5.48674328753125 6.369243898203 7.14655596036444 6.56483604024282 6.33719051345825 5.68770224746515 5.73785533745327 3.78003863256837 4.6426634111803 5.37995515989463 6.08749269500284 5.58109613918165 5.63954959028397 5.95391527332908 6.12782945018687 6.20940879413989 5.95706539546347 5.12492742543743 0.197261746637099 0.195393052349032 0.206816367442079 0.200742225789258 0.193054498121677 0.195705122536882 0.196257052611278 0.191572215053832 0.207229175656267 0.197809792155776 0.191572215053832 0.197374950885975 0.192430840824851 0.197986609476304 0.191572215053832 0.193154702055225 0.203969222542389 0.194105408395154 0.2006939187414 5 5|0 +|/ 6114815 6115702 6115474.4 6112852 6115934 + gene protein_coding_gene TRUE TRUE AT5G18440.1|AT5G18440.2 similar to Os01g0814000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044603.1); similar to P0432B10.22 [Oryza sativa (japonica cultivar-group)] (GB:BAB90401.1); contains domain SUBFAMILY NOT NAMED (PTHR13309:SF3); contains domain FAMILY NOT NAMED (PTHR13309) 1.25662197406042 9.30503492048057 2.02171512940931e-06 7.74345317780344e-05 13.4580279738802 11.214873691192 1.25662197406042 0.177739571967821 AT5G10770_at 2.40816172564155 3.66949513425879 5.5066534304555 4.67995578341755 5.44691098430357 5.28171344682124 1.44636609723787 2.07889900594519 3.70496151766376 3.48182477973806 3.96032926309084 4.433411640508 5.2697921099572 3.56526998985671 3.17382919592503 4.56095892735061 4.7929396552548 4.93356091123898 3.58927915855743 0.236635526214687 0.239084731918479 0.260439365763727 0.240500030049576 0.241943246198518 0.252126634502284 0.251023728886631 0.239064970139296 0.245075242170926 0.239066979433472 0.235456322318541 0.235456322318541 0.235456322318541 0.241758674642476 0.242421606319967 0.235456322318541 0.251482326587501 0.235581655707265 0.240910091659763 5 5 - 3403412 3403895 3403691.091 3403111 3405449 - gene protein_coding_gene TRUE TRUE AT5G10770.1 chloroplast nucleoid DNA-binding protein, putative similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G10760.1); similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] (GB:BAA22813.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.78615878173665 9.30047372950425 2.03117236461153e-06 7.77203376661686e-05 13.4536886005200 7.77891109116058 1.78615878173665 0.284451497744135 AT5G54080_at 9.30040493636263 9.23032578004311 10.1084837106649 10.1194218805363 10.7000106898651 10.3244527577045 9.21637313561718 8.967611791008 8.2192811539064 8.74706084903931 9.09780564919837 8.6610407073752 9.25831248611371 9.2938069132988 8.11174176322593 9.63619077246048 9.63490753073257 9.33415511811116 8.6334264805168 0.120881895150762 0.119422755802033 0.121884271416228 0.124925917121382 0.122415634054141 0.121855215440022 0.125168567856538 0.121663768818046 0.148079457020123 0.126821849947033 0.129536345487870 0.123512966553115 0.120568203968944 0.124758619428082 0.138687189998009 0.119422755802033 0.126829404201068 0.125488410589697 0.122745001531254 5 5|0 +|/ 21964447 21965222 21964888.1 21963095 21966139 + gene protein_coding_gene TRUE TRUE AT5G54080.1|AT5G54080.2 HGO (HOMOGENTISATE 1,2-DIOXYGENASE); homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase Identical to Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) (HGO) [Arabidopsis Thaliana] (GB:Q9ZRA2;GB:Q8L9I0;GB:Q9LDB8); similar to homogentisate 1,2-dioxygenase [Lycopersicon esculentum] (GB:AAF73132.1); similar to Os06g0103300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056540.1); contains InterPro domain Homogentisate 1,2-dioxygenase; (InterPro:IPR005708); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) 0.864826152672677 9.29899489571478 2.03424888585184e-06 7.77203376661686e-05 13.4522812114977 18.5767612245846 0.864826152672677 0.0789168542370758 AT5G01350_at 9.61239187948843 9.78287604202374 10.4993571386270 10.3789835709311 10.6729963913068 10.6652824982256 9.3816773262238 9.28418032891 9.73523126617002 9.6370400362481 10.5670635115267 10.3179241199515 10.4217181735121 10.1735310204766 10.1201245392624 10.4040417202841 10.0098021250577 10.1388527162399 9.92021783772056 0.09592614949821 0.0905251752769015 0.0920464040157083 0.0907388195986868 0.0908455475759152 0.0928224747851504 0.0924966424090845 0.0913042457827902 0.100210252668421 0.0901491680332349 0.0941386189698597 0.091000445273529 0.0971819673106718 0.0969448005490955 0.0888441960779591 0.090695742578792 0.100463517504384 0.0920869641614541 0.0968918969107839 5 5|0 -|/ 145985 146884 146451.333 145635 147199 - gene protein_coding_gene TRUE TRUE AT5G01350.1 similar to Os04g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053268.1) 0.771921349843554 9.29526644063185 2.04202789892675e-06 7.79371431426764e-05 13.4487318549914 20.0513657907179 0.771921349843554 0.039885182288938 AT5G61230_at 9.23865624369385 9.17494778526877 9.86136995619418 9.8688916127706 10.1565853198843 9.9829370900347 8.8964135892924 9.01327606654208 9.1766751616494 9.12619415759647 10.0751781954842 9.73172042952953 9.84003864960877 9.88866406585784 9.7841866338411 9.94565005856772 9.90722803293412 9.6757797876214 9.3167713505344 0.0971302451367694 0.092120008762462 0.0926920962723957 0.0933124510339552 0.0932991520611991 0.095347467277535 0.0944573430967644 0.0960017116116463 0.100331183489857 0.0980262521022014 0.0955451539946977 0.0948319436497213 0.096196493121278 0.0976324165222976 0.0948540212714236 0.0951752659662344 0.0974929744249415 0.097030009495657 0.0937577881686993 5 5 + 24645555 24645978 24645764.636 24644413 24646174 + gene protein_coding_gene TRUE TRUE AT5G61230.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07840.1); similar to ankyrin 2,3/unc44 [Aedes aegypti] (GB:EAT33004.1); similar to Os02g0102600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045598.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.768065707637747 9.28852266524797 2.05618008954730e-06 7.840826196007e-05 13.4423082762981 19.0554360187638 0.768065707637747 0.0378850965324522 AT5G01470_at 4.26163931752318 4.10257205058476 5.19887249776737 5.31244707292796 5.52247189952366 5.67963696073343 4.57054821304714 4.54177931158817 4.01839661940518 3.93104959708751 4.92044846436351 4.46077779294312 5.254620438416 4.3497464978173 4.37488443625219 4.60816739563829 4.96419953616102 4.25227001977171 4.50864787353612 0.222816838902018 0.223072360731657 0.219543292807796 0.223859869044867 0.225395158152330 0.221566380789225 0.230788231060622 0.218594333951906 0.232073688625989 0.221689632764499 0.222825062774667 0.223416908467903 0.224766455582282 0.233313568865524 0.219728321540145 0.220574163869030 0.225555585680941 0.218594333951906 0.218594333951906 5 5|0 +|/ 191483 192379 191971.7 190927 192610 + gene protein_coding_gene TRUE TRUE AT5G01470.1|AT5G01470.2 similar to Os03g0826700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051766.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99651.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain METHYLTRANSFERASE (PTHR10108) 0.777331838606541 9.2799457882164 2.07433296090674e-06 7.89054734462646e-05 13.4341316589729 9.29916459180196 0.777331838606541 0.0436873356410689 AT5G47900_at 2.53362790174069 3.08422532888185 3.7482856045717 3.75989629125695 4.47115584805418 4.43564019852798 3.77121971411663 3.73292617587739 3.63050369869035 3.61365179367704 4.42976288191075 4.78490431438628 4.53081639517573 5.03238685843352 4.36909619769054 4.8393995288910 4.76018510815511 4.428117694325 3.66549043165745 0.261110955822165 0.250342145785734 0.256882323109575 0.262059817443686 0.252413269458406 0.249732135604432 0.250507738091821 0.257865217775387 0.264154862428470 0.261221248833909 0.262325362268728 0.252329695959029 0.244796313110253 0.244796313110253 0.244796313110253 0.261086093602909 0.251769604695172 0.272203384944118 0.255739927448512 5 5|0 +|/ 19409966 19411335 19410939.4 19409209 19411387 + gene protein_coding_gene TRUE TRUE AT5G47900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27730.1); similar to H0502B11.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66526.1); similar to Os04g0404900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052706.1); contains domain Zinc-binding domain of translation initiation factor 2 beta (SSF75689) 0.916764843238971 9.2798606605122 2.07451400125611e-06 7.89054734462646e-05 13.4340504647915 7.83381326473473 0.916764843238971 0.0957322526170688 AT5G47810_at 4.19326859099838 4.04104041045471 4.84854701879858 4.72071575729448 5.16406846580522 5.67291324743989 3.55199747918639 3.32985984236484 3.64654089513650 3.66988280312155 4.35836620910677 3.96460930408218 4.0147615757044 4.18232876413972 4.73588260404983 4.55916709370151 4.35112799078595 4.41720911166016 3.98822190036756 0.213898504690567 0.215922022709977 0.214872884586943 0.218353014871770 0.218897733142347 0.212075244988745 0.213483536077106 0.209636845102539 0.218555445551812 0.214113192846328 0.209219631186621 0.209219631186621 0.212781692701953 0.217572635243621 0.222956075662157 0.211698092517603 0.226803922631299 0.22029572345905 0.212267104280309 5 5 - 19373825 19374357 19374063.727 19373582 19375351 - gene protein_coding_gene TRUE TRUE AT5G47810.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD86939.1); similar to Os04g0469500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053045.1); similar to OSIGBa0124N08.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67040.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.938617961847702 9.27896100357074 2.07642834129153e-06 7.89054734462646e-05 13.4331923315154 8.48587474214065 0.938617961847702 0.102055661722039 AT5G50440_at 4.40246920977333 4.30971780252505 4.88368456088988 4.44437198512063 5.34898710228518 4.98002762334467 3.47036146014892 3.62394709648599 3.28803531435968 3.27243319339593 4.41873921567014 4.33685846205748 4.03385651169843 4.82664128799595 4.24400205515224 4.37373863747686 3.65345722689167 4.35515908065862 3.49468096925493 0.216554344111725 0.208990016328895 0.208930339547377 0.207654207502671 0.206666600254552 0.213517516771035 0.212513816475122 0.224548622318288 0.227507476619615 0.207235176090798 0.208993932043656 0.209073568347772 0.211145272491275 0.210102997082949 0.210543772166250 0.213242529199731 0.218799576483735 0.208433631052118 0.212135184797809 5 5 - 20554887 20555566 20555214.182 20554751 20556169 - gene protein_coding_gene TRUE TRUE AT5G50440.1 MEMB12 (Golgi SNARE protein membrin 12); v-SNARE member of Membrin Gene Family Identical to Membrin 12 (AtMEMB12) (Golgi SNAP receptor complex member 2-2) (MEMB12) [Arabidopsis Thaliana] (GB:Q9FK28); similar to MEMB11 (Golgi SNARE protein membrin 11), v-SNARE [Arabidopsis thaliana] (TAIR:AT2G36900.1); similar to PREDICTED: similar to Gol (GB:XP_794856.2); similar to Os03g0655200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050802.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) 0.945616996520049 9.27892802590204 2.07649854938357e-06 7.89054734462646e-05 13.4331608742969 8.24895738109022 0.945616996520049 0.104022697430477 AT5G58570_at 8.4307182862091 8.42564479294818 9.77930591442765 9.92766572583594 9.95371149452668 9.69694643937716 9.08999752071116 9.13708139596964 8.25712511266283 8.38538132789724 8.29492502691865 7.73335297548594 8.95279309352164 8.91338278485023 7.11024587500956 8.39182356173255 8.90521110874663 8.500919194357 6.85499821557372 0.157126739721419 0.155101987826706 0.152573149905284 0.154587361395329 0.151457442827643 0.166433127431386 0.150996782304810 0.156434272408255 0.159115289433441 0.153602856446084 0.160086499052531 0.16392734951803 0.153719523883929 0.150996782304810 0.166546081707193 0.154392755451266 0.159988248885463 0.160568126888968 0.176498218803362 5 5 - 23690098 23690328 23690217 23689921 23690513 - gene protein_coding_gene TRUE TRUE AT5G58570.1 unknown protein 0.79318852255776 9.2734149865314 2.08827183736220e-06 7.92833641885832e-05 13.4279003911962 17.3965505735619 0.79318852255776 0.05196873876398 AT5G47910_at 8.20862207347404 8.51198875951966 9.63124688914475 9.72289903676686 9.26775870651857 8.86193876044801 7.9690502229869 7.96850502862127 7.09832188854284 7.28605623677912 7.77963720915485 8.45506558529343 7.39766552438533 8.20702934358391 7.05122265709026 7.97542146913338 7.58673846194178 7.96699203180818 7.27806861439298 0.208115731933186 0.208370895450791 0.217582444776337 0.222015693038151 0.215276767332618 0.208115731933186 0.216403877198189 0.212115570464846 0.208115731933186 0.213381046831226 0.208115731933186 0.208115731933186 0.213642663028118 0.212872199788288 0.217559719793356 0.208115731933186 0.222806876729025 0.208115731933186 0.212397849230289 5 5 + 19418332 19418955 19418600 19414669 19419287 + gene protein_coding_gene TRUE TRUE AT5G47910.1 RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. similar to ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07390.1); similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to ATRBOHB (RESPIRATORY BURST OXIDASE HOMOLOG B), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G09090.2); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); similar to whitefly-induced gp91-phox [Lycopersicon esculentum] (GB:AAF73104.1); similar to respiratory burst oxidase homolog [Nicotiana benthamiana] (GB:BAC56865.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916); contains InterPro domain NADPH oxidase Respiratory burst; (InterPro:IPR013623) 0.894037641231497 9.27243980147256 2.09036190122438e-06 7.92932818918884e-05 13.4269695437128 16.2793947422869 0.894037641231497 0.0891057755193004 AT5G52240_at 10.2394950638398 10.1071133767008 10.7124693456683 10.6400297622900 10.9445219611822 10.8083603014098 9.60263411776881 9.70726159611865 9.80847878419534 9.58164390602067 10.3503058689288 10.3241442907552 10.4194668623860 10.4005006674332 10.2435649234325 10.2480772126059 10.2011214670186 10.4100547323117 9.55425705574182 0.0940983274150754 0.0857367287944961 0.0946376776510868 0.092244981468244 0.094739398152878 0.0890197395300756 0.0918590994300382 0.0919991433355985 0.0927769484889899 0.0895183443451893 0.0869883577106978 0.0857367287944961 0.0865115198822568 0.085858733152622 0.0966299291617356 0.0857367287944961 0.0971889323133385 0.0877162850185355 0.0891500310607452 5 5 + 21230441 21231745 21231099.273 21230284 21231965 + gene protein_coding_gene TRUE TRUE AT5G52240.1 MSBP1 (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 5) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. Identical to Membrane steroid-binding protein 1 (AtMP1) (MSBP1) [Arabidopsis Thaliana] (GB:Q9XFM6;GB:Q9LTJ7); similar to ATMP2 (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 3), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT3G48890.1); similar to putative steroid membrane binding protein [Triticum aestivum] (GB:ABB90550.1); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.7693736125768 9.27113805090872 2.09315541081869e-06 7.9329842598597e-05 13.4257268206710 20.3316262331698 0.7693736125768 0.0395608075664102 AT5G24850_at 3.63402628315192 3.65445536206046 4.57375039930112 4.52285982669283 4.872107615603 5.10090569664179 4.45485345886484 4.63011576433366 3.58980765679913 4.11675117571527 4.6146040146276 4.96086169491794 4.68445178278671 4.72860077544699 4.09454080617323 5.09038263513258 4.58541168222144 4.90846008023856 3.69887492740482 0.199440655229554 0.201436871669674 0.203519988839364 0.200903382259479 0.207144382091182 0.208642940017484 0.204112394522045 0.202267920243130 0.205074030109402 0.204071639237465 0.202070141478268 0.204467912467046 0.201844163675292 0.204648531477172 0.204756034011010 0.204097057842778 0.206067717388175 0.207994820139635 0.199440655229554 5 5|0 -|/ 8535449 8536328 8535858.625 8535285 8538110 - gene protein_coding_gene TRUE TRUE AT5G24850.1 CRY3 (CRYPTOCHROME 3); DNA binding / DNA photolyase/ FMN binding Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis chryptochrome. Identical to Cryptochrome DASH, chloroplast/mitochondrial precursor (CRYD) [Arabidopsis Thaliana] (GB:Q84KJ5;GB:Q8VZD8); similar to PHR2 (PHOTOLYASE/BLUE-LIGHT RECEPTOR 2) [Arabidopsis thaliana] (TAIR:AT2G47590.1); similar to Cryptochrome DASH, chloroplast/mitochondrial precursor (GB:Q84KJ5); similar to Cryptochrome DASH, chloroplast/mitochondrial precursor (Cryptochrome-3) (GB:Q38JU2); similar to Deoxyribodipyrimidine photolyase, class 1 [Medicago truncatula] (GB:ABE80396.1); contains InterPro domain DNA photolyase, FAD- binding N-terminal; (InterPro:IPR006051); contains InterPro domain DNA photolyase, FAD-binding; (InterPro:IPR005101); contains InterPro domain DNA photolyase, N-terminal; (InterPro:IPR006050); contains InterPro domain Deoxyribodipyrimidine photolyase, class 1; (InterPro:IPR002081) 0.790323049046848 9.26943106110486 2.09682468369887e-06 7.93534225042284e-05 13.4240969606907 8.68549701945597 0.790323049046848 0.050771016414577 AT5G15490_at 6.35980907233187 6.81227853468851 6.96344264791766 7.08903266583059 6.39697975453957 6.74219734832962 6.11489761172557 7.04955574623508 5.31737424561334 5.21476721440083 7.92006745639288 8.62968936071302 7.11702696261142 7.89755193342175 8.5544739325062 7.54943374253495 7.27031451232831 7.33456919349868 5.59038875140459 0.234378400538830 0.225800508398388 0.223083911592213 0.22670691363161 0.226039785753699 0.241682511145456 0.230049472644131 0.2227194866744 0.233008417923861 0.233580915675679 0.2227194866744 0.2227194866744 0.2227194866744 0.230027038556945 0.225482234933654 0.2227194866744 0.233065132149715 0.232446052145346 0.228313528203658 5 5 - 5028016 5028447 5028208.364 5027642 5030197 - gene protein_coding_gene TRUE TRUE AT5G15490.1 UDP-glucose 6-dehydrogenase, putative similar to ATUGD1/UGD1 (UDP-glucose dehydrogenase 1), UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G26570.1); similar to UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G29360.2); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G39320.1); similar to UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (GB:Q96558); similar to putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum] (GB:AAT40105.1); similar to putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum] (GB:AAT40106.1); contains InterPro domain UDP-glucose/GDP-mannose dehydrogenase; (InterPro:IPR001732); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927) 1.31187100626021 9.26914604183196 2.09743802809015e-06 7.93534225042284e-05 13.4238247897267 13.2701829846451 1.31187100626021 0.190616588256786 AT5G57150_at 4.58761924932314 5.07234341471445 6.56910804572332 6.54210868593695 6.52941937618832 5.10708714517217 3.46876323515101 3.51632118640196 3.04548112021717 2.82052716379458 4.44950493756757 4.44829948948871 4.66067711199946 4.49381498940518 4.22389823244402 4.02151913244518 3.81050678026777 3.95806738481036 3.05641459863887 0.291093938295721 0.273749671452206 0.302149674823476 0.296242158463443 0.286209890849913 0.311036007674454 0.272844622450621 0.286966811097991 0.283899201411989 0.2904455558103 0.272844622450621 0.277772315591259 0.277910780649916 0.293359688065456 0.282266138325751 0.272844622450621 0.293650770004805 0.277358412559077 0.274360929010198 5 5 + 23169813 23172073 23170490.818 23169412 23172292 + gene protein_coding_gene TRUE TRUE AT5G57150.1|AT5G57150.2|AT5G57150.3 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G29930.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE84573.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092)|similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G29930.3); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE84573.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.65490704413877 9.26675231630709 2.10259686444074e-06 7.94792457238745e-05 13.4215386291679 8.79030977641995 1.65490704413877 0.260214444740736 AT5G48840_at 6.54094935859612 6.699875057633 7.87512736306368 7.70872758720047 7.92109639083969 7.36424518434475 7.39123149087866 7.0597048864647 5.401345110908 5.91063049410238 6.5073056869396 7.14977985393835 7.29427940457592 6.75246088904928 6.40193216328425 6.9741704752638 7.04548364683629 6.70791070054635 5.63655324373077 0.235982687916815 0.233291534846958 0.239368716385536 0.233291534846958 0.239145717500941 0.238029749669455 0.238560234109667 0.235398856521597 0.259313281706874 0.254030299241654 0.245402779771665 0.238837202413438 0.233291534846958 0.23383242063895 0.238990227999691 0.240503603873226 0.236102625278074 0.239206504524695 0.246325439652885 5 5 - 19821049 19821894 19821487.273 19820783 19822303 - gene protein_coding_gene TRUE TRUE AT5G48840.1 PANC (Arabidopsis homolog of bacterial panC); pantoate-beta-alanine ligase Identical to Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) [Arabidopsis Thaliana] (GB:Q9FKB3;GB:Q682X9); similar to Pantoate--beta-alanine ligase precursor (Pantothenate synthetase) (Pantoate-activating enzyme) (GB:O24035); contains InterPro domain Pantoate-beta-alanine ligase; (InterPro:IPR003721) 0.999507334638105 9.26049242626032 2.11615299777293e-06 7.98571022927894e-05 13.4155571516189 13.5719571492783 0.999507334638105 0.119010715078629 AT5G60300_at 4.81777152304416 5.15725371711443 5.47935994730825 5.51969686936655 5.00842319450523 5.0791698875932 4.46658865613113 3.96129072583162 3.77241090786528 4.68277496852216 5.60740472714761 5.54145534872509 5.52348022869112 5.68435474417602 5.32022901264531 5.53831446533894 5.53628637047602 6.11867317025913 4.67272690038534 0.250398104874417 0.238798809821671 0.243382693432165 0.241948202485485 0.247754882381349 0.250638962900617 0.239956458818033 0.241318375028089 0.257066042793596 0.242677835072025 0.242269478879594 0.247081942644714 0.246573198740165 0.240284420912202 0.242292243998737 0.239376375639659 0.247242567979259 0.238798809821671 0.241099765560752 5 5 + 24283710 24284190 24283997 24281848 24285255 + gene protein_coding_gene TRUE TRUE AT5G60300.1|AT5G60300.2|AT5G60300.3 lectin protein kinase family protein Lectin Receptor Kinase involved in protein-protein interactions with RGD-containing proteins as potential ligands. Role in cell wall-plasma membrane adhesion. similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G60310.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45430.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985)|similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G60310.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45430.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.951870076002225 9.26043554173162 2.11627661787863e-06 7.98571022927894e-05 13.4155027779322 9.92856715712349 0.951870076002225 0.106285198626507 AT5G24320_at 4.11034756857315 3.93428896778977 5.22237975463262 4.64515520085785 6.14104725295174 5.36182341095456 4.86198242629134 4.69364043166319 3.91952282381092 3.41755631418202 5.19005602287973 5.21015136113919 5.55893782032719 5.33258929915258 4.31270461060477 6.09331680464295 5.79511137123283 4.53137161066495 3.88081391131033 0.247451340370264 0.239072238150388 0.247652889599709 0.241411746250212 0.238253644053692 0.250594262453512 0.244292295203616 0.241901548128691 0.263631236417392 0.256628538480729 0.247838483676459 0.238253644053692 0.238253644053692 0.243659598422995 0.253665821457920 0.241504997873660 0.245025848433904 0.242553625302877 0.238253644053692 5 5 - 8284941 8285283 8285093 8284861 8287654 - gene protein_coding_gene TRUE TRUE AT5G24320.1|AT5G24320.2 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G53500.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.22813436787463 9.25391382200542 2.13050149699283e-06 8.03239663842359e-05 13.4092666364433 9.36749689955509 1.22813436787463 0.173029884025136 AT5G21040_at 8.11680613357906 7.9931338889988 8.84796198035335 8.87861479953066 9.04107047629365 8.92389000198552 8.11340592661173 8.11607406814525 8.19976463852034 8.0696307649664 8.98994261458187 8.97528396079968 8.90966604898954 8.96029858861455 8.68157577853039 9.09578003012464 8.69519075293406 8.77305774441047 8.38307432403335 0.130845333023311 0.128261998339836 0.133496582958834 0.126951352993003 0.128556407259405 0.135086178249364 0.124306061124830 0.128871398879217 0.136364099703613 0.131701234188496 0.122965573239664 0.122865344975896 0.125205652975210 0.122865344975896 0.128345838290539 0.124519402697535 0.133678563951012 0.123338490331310 0.124913948886273 5 5 - 7145124 7145616 7145385.818 7144924 7147131 - gene protein_coding_gene TRUE TRUE AT5G21040.1 F-box family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G43770.1); similar to WD-repeat protein [Nostoc sp. PCC 7120] (GB:NP_490235.1); similar to Os04g0619700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053901.1); similar to WD-40 repeat protein [Chlorobium phaeobacteroides DSM 266] (GB:YP_911315.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.75281942045344 9.24255328251677 2.15552874213427e-06 8.11969351881393e-05 13.3983927294946 17.0551643339605 0.75281942045344 0.0299603567202778 AT5G05870_at 6.10015993649829 6.14748885521482 7.10548873561918 6.74304639344228 7.28944254066384 7.37513805991064 6.43631484510301 6.47675309015805 6.28024894590303 6.04826818905088 7.16914465827911 7.05831537920074 6.92249284349398 6.75822794892913 6.91625863964194 7.02726755807869 7.21875883955361 6.88020256060157 6.23702120098012 0.173429746734204 0.169387596938918 0.181603043131160 0.18202171752757 0.181815454416815 0.174662941082353 0.167016892840138 0.167016892840138 0.190180447630382 0.182684542246345 0.172738516431461 0.167016892840138 0.171702552901601 0.169854688133548 0.171267793476317 0.167683666893601 0.167966852134992 0.182528906870499 0.180980686953538 5 5 + 1768619 1769148 1768847.545 1767640 1769263 + gene protein_coding_gene TRUE TRUE AT5G05870.1 UGT76C1 (UDP-GLUCOSYL TRANSFERASE 76C1); UDP-glycosyltransferase/ transferase, transferring glycosyl groups Identical to Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-) (UGT76C1) [Arabidopsis Thaliana] (GB:Q9FI99); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 0.821710262746556 9.23954554763105 2.16220800682425e-06 8.13600681771561e-05 13.3955115256088 13.3004022231348 0.821710262746556 0.0653458286925079 AT5G58100_at 7.33412463971787 7.37238743911972 8.47218826353966 8.14241183729739 8.61032587507229 8.18325996657362 7.6504296553804 7.41011524000869 7.14885766518706 6.37259616148373 7.44888521100408 7.83612418668652 7.78750998814154 7.78697990416157 7.53952542113742 7.73951906032121 7.54420224623675 7.79576992267038 6.6484660314241 0.208628985050105 0.202493439952208 0.203086185818829 0.206665262388152 0.209300466006177 0.203972638777987 0.208966958249104 0.207252556114601 0.215706153000016 0.21834034239457 0.198488950545738 0.198209738097162 0.206419791350553 0.204493673460058 0.20607218603857 0.198209738097162 0.213583204588367 0.198209738097162 0.215227866923380 5 5 + 23531007 23532038 23531410.6 23524928 23532246 + gene protein_coding_gene TRUE TRUE AT5G58100.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28720.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19375.1); similar to Os02g0469200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046826.1) 0.935895057622022 9.23891440224987 2.16361243470736e-06 8.13600681771561e-05 13.3949068089402 15.1009659205437 0.935895057622022 0.102432112655074 AT5G48760_at 7.14735320220403 6.71955194568763 7.35415648270422 7.09543348544031 7.3582579979809 7.27300497315356 6.69892097024545 7.25924548201138 5.80650223389527 6.10004166566428 7.9709118907679 8.41912204133025 8.18056635182594 7.63305421235306 8.60095748534102 7.80486004838809 7.64088050908275 6.52887770638407 6.316000156161 0.202495815283491 0.202124949578406 0.204607873305458 0.206936291537072 0.213809167511251 0.214196588169994 0.213744506097979 0.206760028251481 0.233313043008833 0.220904832842316 0.202124949578406 0.204013161082422 0.212660116846524 0.213203216966399 0.215172082028764 0.202124949578406 0.210103418865187 0.210178148787252 0.219143552532758 5 5 - 19788555 19789820 19789370.455 19788364 19789964 - gene protein_coding_gene TRUE TRUE AT5G48760.1|AT5G48760.2 60S ribosomal protein L13A (RPL13aD) Identical to 60S ribosomal protein L13a-4 (RPL13AD) [Arabidopsis Thaliana] (GB:Q9FKC0;GB:Q42084); similar to 60S ribosomal protein L13A (RPL13aA) [Arabidopsis thaliana] (TAIR:AT3G07110.1); similar to 60S ribosomal protein L13A (RPL13aC) [Arabidopsis thaliana] (TAIR:AT4G13170.1); similar to 60S ribosomal protein L13a-like protein [Solanum tuberosum] (GB:ABA46790.1); contains InterPro domain Ribosomal protein L13; (InterPro:IPR005822); contains InterPro domain Ribosomal protein L13, archea and eukaryotic form; (InterPro:IPR005755) 1.04358388177995 9.23790471540543 2.16586125169914e-06 8.13740563233664e-05 13.3939393134397 14.0740331337239 1.04358388177995 0.130788933444737 AT5G43460_at 10.5461118970003 10.6460814024704 10.9380344881325 10.9514065016942 11.6419062807135 11.4719925662441 9.91257121545733 10.1231136977021 10.2645583872184 9.99423383913688 11.1357829237879 10.7968395233930 10.9534205684222 11.0337297536064 10.5352703640355 10.8355202449163 10.5992924682359 10.6584623333898 10.3131121470753 0.0885606933694235 0.0876602329201011 0.0919601331108413 0.0899031968511992 0.091174110810505 0.0947686139269657 0.0895538067270166 0.0896977475934845 0.103303047127901 0.0877532845078117 0.0894073893031408 0.0886704416739912 0.0885857601723942 0.0879797955313219 0.0930229407163217 0.0877512268406957 0.097840881101227 0.0915449763516263 0.0891486514211577 5 5|0 +|/ 17477997 17478695 17478424.4 17477101 17478979 + gene protein_coding_gene TRUE TRUE AT5G43460.1 lesion inducing protein-related similar to lesion inducing protein-related [Arabidopsis thaliana] (TAIR:AT1G04340.1); similar to putative lesion-inducing protein [Capsicum annuum] (GB:AAR83861.1); contains InterPro domain Surfeit locus 4-related; (InterPro:IPR011592); contains InterPro domain HR-like lesion-inducer; (InterPro:IPR008637) 0.785885193684163 9.23682990969446 2.16825788855672e-06 8.13935692123756e-05 13.3929093004818 21.2834895379852 0.785885193684163 0.049968023097692 AT5G28010_at 3.47151251040314 3.24895773874057 4.26597824519892 3.99797255954051 4.85387514803338 5.21750757069591 2.65971564819195 2.39627929831126 3.31865191019204 2.6544736232319 3.61711743650967 2.89342637813366 3.18871573603944 2.92648875147767 2.90019193545653 3.02338506793571 3.33895707316283 3.12304462988920 2.79825149078495 0.258464397592859 0.257473202453147 0.268047684783490 0.257479382836625 0.275040710596428 0.271910994236201 0.256049908057348 0.253320713176635 0.257786807050368 0.253414378745521 0.250943288354362 0.253216720026960 0.255681676029438 0.260855981605192 0.259716801553700 0.250943288354362 0.252599960490528 0.264144170682731 0.256788761399967 5 5|0 +|/ 10024827 10025329 10024998.2 10024817 10025386 + gene protein_coding_gene TRUE TRUE AT5G28010.1 Bet v I allergen family protein similar to Bet v I allergen family protein [Arabidopsis thaliana] (TAIR:AT5G28000.1); similar to major latex-like protein [Prunus persica] (GB:AAK14060.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) 0.921170308314038 9.23403491227268 2.17450373348512e-06 8.15574175906356e-05 13.3902302072382 6.78907894862873 0.921170308314038 0.0983500155776858 AT5G64160_at 5.22403181173417 5.52080542675639 5.94274576136172 5.82135158541175 6.46721803728724 6.25125730800167 4.75707339197931 5.04468788867018 5.19568705560436 4.77348999387057 5.77725142773695 6.05273760744916 5.51114939712756 6.15486623122209 5.40393302635529 5.78857247765265 5.63027380440238 5.66270978510081 4.9928302517303 0.215706213275200 0.213479291699306 0.204588924191443 0.209719440535294 0.214349192520783 0.208810418728021 0.200901649698566 0.213070980632735 0.221217998095481 0.210398170672827 0.213984981531166 0.207111696204149 0.209683128395849 0.210599264805814 0.209583993907939 0.213818779459620 0.21519894770203 0.201586227059496 0.204587684782229 5 5|0 +|/ 25688279 25689482 25689039.3 25688156 25689689 + gene protein_coding_gene TRUE TRUE AT5G64160.1 similar to Os02g0753200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048144.1) 0.872172247896518 9.2328000024715 2.17726953602132e-06 8.15905723119426e-05 13.3890462412501 10.9961576447499 0.872172247896518 0.0833851035236349 AT5G14170_at 8.145339684378 8.37094175342974 8.79094160929825 9.00489880177015 9.58437802933052 9.3783909920476 8.01999436527089 7.81588490669158 8.22154634569116 8.00569694323364 8.89430384459463 8.79915509242231 8.95190710258943 8.75290747950922 8.56377813174349 8.85396165816593 8.67283900284957 8.86778331663893 8.4023131194328 0.154764091773499 0.152673597396817 0.156724439196272 0.157918834548409 0.159033784610467 0.158186683289502 0.160663509255382 0.165934424279875 0.156117484216811 0.157278790558707 0.148191950842000 0.15446310368173 0.153592733063640 0.154225079605627 0.153815867811356 0.153340834948642 0.157508297490435 0.156712945872480 0.147688212022246 5 5 - 4568725 4569373 4569102.818 4568511 4570949 - gene protein_coding_gene TRUE TRUE AT5G14170.1 SWIB complex BAF60b domain-containing protein Identical to Protein At5g14170 [Arabidopsis Thaliana] (GB:Q9FMT4); similar to SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G01890.1); similar to OSJNBa0072D21.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD40740.2); similar to OSIGBa0092E09.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66378.1); similar to SWIB/MDM2 [Medicago truncatula] (GB:ABE78941.1); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) 0.843169749057035 9.23191495680063 2.17925410067319e-06 8.15944190971694e-05 13.3881976061285 17.1410620626188 0.843169749057035 0.0735767916657666 AT5G08070_at 2.74234725131123 2.69955969297274 3.60665927988675 4.09054778274032 4.49315700745564 3.97973690414615 3.73458991934791 3.5657143756355 2.31123727310523 2.08816826356369 2.87324657985548 3.31456494752224 3.34890968759568 3.26038484783493 2.35982870629684 3.75488477435202 4.15340045108054 3.32949255290104 1.93548397686662 0.247586936380487 0.248480045564777 0.25911116982421 0.25643328933516 0.253832471974683 0.256440179541194 0.251667063071015 0.247586936380487 0.257590758836423 0.248347677156511 0.255725370213054 0.247762430146183 0.247586936380487 0.251859761702019 0.266111402908492 0.252012099386786 0.263029995425394 0.247892278002951 0.250575802971736 5 5 + 2585053 2585550 2585374.818 2584886 2585614 + gene protein_coding_gene TRUE TRUE AT5G08070.1 TCP17 (TCP domain protein 17); transcription factor similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G60970.1); similar to putative transcription factor [Solanum tuberosum] (GB:CAD91129.1); similar to Os05g0513100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056024.1); similar to Os01g0763200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044333.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) 1.02234083216252 9.22793743465568 2.18819725838640e-06 8.18585742156e-05 13.3843826840514 6.31952347982454 1.02234083216252 0.125759433832917 AT5G49660_at 9.95977346135015 10.2231431154752 10.9174700123903 10.9550787494174 10.8786041199978 11.0679781399972 10.1006819465903 10.3623024761145 9.73895812123355 9.96903885636018 10.7655612192922 10.6427978363272 10.8827856826546 10.3979996304741 10.5341288757608 10.8598491755143 10.9908941238170 10.6980072989931 9.80110927808448 0.0858823351241743 0.083641205106433 0.083641205106433 0.084606327835678 0.0864637465703867 0.0879598464141426 0.0918936881201467 0.0847351856223544 0.0914591599024684 0.0862797394080086 0.083641205106433 0.083641205106433 0.0841155323988929 0.0863180226382082 0.083641205106433 0.083641205106433 0.0894285753226637 0.0841457266483936 0.0861286052661551 5 5|0 -|/ 20178636 20179425 20178902.3 20178432 20181955 - gene protein_coding_gene TRUE TRUE AT5G49660.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G09970.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99940.1); similar to clavata-like receptor [Picea glauca] (GB:ABF73316.1); similar to Os12g0632900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067348.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.839220867014777 9.22429986293066 2.19641089798581e-06 8.20950067764612e-05 13.3808923336117 20.8370648687901 0.839220867014777 0.0724117071285709 AT5G62575_at 6.96058347780343 7.28584078215489 7.89607158405489 7.95870520490023 7.7831047002088 7.22822801157518 6.37838914592299 6.9098107821458 5.66407563315601 6.24125078344256 7.31224989916259 7.88484011362633 7.10189965484258 7.60516815414327 7.8580767652961 7.37396287008122 7.21720313307142 6.96663158816624 6.24237320215819 0.213623802042773 0.209487515777065 0.224365731740073 0.219503698140703 0.224233362566172 0.233615086745278 0.220305924492146 0.212907142731095 0.220478273438574 0.209487515777065 0.213430825137384 0.210037076037866 0.215865927096885 0.217068769507787 0.213663240033563 0.211763738236914 0.237310561690079 0.211285684429187 0.216224126818255 5 5|0 +|/ 25134769 25135761 25135032.25 25134714 25136118 + gene protein_coding_gene TRUE TRUE AT5G62575.1|AT5G62575.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G47833.1); similar to Os09g0382500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063065.1) 1.09932107211223 9.21873512949712 2.20904080790934e-06 8.2495956316585e-05 13.3755500776065 14.0322103253713 1.09932107211223 0.144789199900293 AT5G67320_at 7.14248991685747 7.2581876686083 7.83449930628122 7.82971946405773 8.42916458398275 7.86660759622928 6.90882406738591 6.33207495543651 6.62420000327046 6.3359275315731 7.54238275620643 7.66440330567907 7.55351895791441 7.48958905200171 7.31529487842011 7.5369787807754 7.50871597106638 7.43070063093162 6.29936372170428 0.191868739012240 0.193105112679935 0.20628634759828 0.198064464726943 0.199929919225625 0.204093911288224 0.192670733223251 0.201442969966821 0.205294563854381 0.212911672902135 0.190498825650375 0.191957859396790 0.192404366650163 0.199208706433485 0.201440776634461 0.194421998038934 0.196903553164766 0.197272129128089 0.188528306852017 5 5|0 +|/ 26877141 26878168 26877601.333 26874380 26878345 + gene protein_coding_gene TRUE TRUE AT5G67320.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative WD-40 repeat protein family [Oryza sativa (japonica cultivar-group)] (GB:BAC84349.1); similar to Os07g0405100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059429.1); contains InterPro domain LisH; (InterPro:IPR013720); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 1.08248560417040 9.2161528108273 2.21492844941593e-06 8.26446444782183e-05 13.3730698731732 14.4127101750917 1.08248560417040 0.140858281241828 AT5G04070_at 3.54221749700286 3.71975564405408 4.79052705200225 4.73132996859906 4.73068958079253 4.43517043342676 3.99074807362895 3.28392177843212 2.95725999789697 2.68513881366153 3.90116434526893 3.56180752102177 3.83193067966767 4.07945072044685 3.86968859650352 4.03140644003087 4.39922367537122 4.00233254831786 2.9667291230552 0.223741925474366 0.226586228574351 0.235654909914076 0.225545536258889 0.233260446897548 0.237426891976590 0.227984257210992 0.228978058191366 0.249342848596652 0.225436863504539 0.223146476245649 0.221779519690055 0.226884275582617 0.224835373602485 0.227033293656372 0.222726624493794 0.226800352578724 0.230013559728858 0.233618899057330 5 5|0 +|/ 1102971 1104101 1103383.9 1102091 1104447 + gene protein_coding_gene TRUE TRUE AT5G04070.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G15940.1); similar to ALTE [Homo sapiens] (GB:AAQ89208.1); similar to Os09g0346600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062940.1); similar to DHRSX protein [Homo sapiens] (GB:AAH19696.2); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.06384238235817 9.21203774779897 2.2243459000652e-06 8.2924669900853e-05 13.3691160580301 7.56771244217557 1.06384238235817 0.136478490210452 AT5G11760_at 8.97225124361887 8.94076912267905 9.56439803073894 9.51678958634 9.94851917399929 9.84682916461173 8.82948013052394 8.52257778784602 8.4800511436801 8.60201280583138 9.26499220191471 9.29469776977831 9.27867789052093 9.2787909739924 9.33255523914884 9.11565877651358 9.42842248135976 9.17475516070787 8.65033271487414 0.100149928682866 0.0939497147207824 0.0988387350115131 0.0991882203328716 0.0982786169237373 0.0992486922067399 0.0966417829339066 0.0989736462774632 0.121344423054090 0.098462132343068 0.100675778677563 0.0936571192334145 0.0959090418888618 0.0993300831520204 0.0981478548138667 0.0950698491431149 0.09676256916494 0.101360180346158 0.0969915862917565 5 5 + 3789765 3790272 3790037.364 3789260 3790453 + gene protein_coding_gene TRUE TRUE AT5G11760.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95651.1) 0.798233837351182 9.20780886898132 2.23406905905813e-06 8.32156013409672e-05 13.3650509955078 18.1919689633134 0.798233837351182 0.056815612984822 AT5G67220_at 8.6724370518772 8.7708605510379 9.31766268777033 9.33467116621772 9.52581247274992 9.46537072891283 8.49751663485022 8.49792637991395 8.52843289901631 8.4925330776845 9.16851234693577 9.226180782673 9.04497371441497 9.09403910930903 9.28157937832517 9.16598177621505 8.98417107567567 9.1025222035229 8.35428949952165 0.119269051229241 0.116295622793096 0.124209876977461 0.120206238688532 0.123376233611457 0.120458834289181 0.121534870912525 0.123221132564041 0.13303045515187 0.122711185826310 0.125652720684760 0.118713068344941 0.119646770327101 0.121268140049295 0.127786790010555 0.121205896394798 0.121074592830803 0.121165673407082 0.124230159060582 5 5 - 26837502 26838077 26837785.727 26837347 26839190 - gene protein_coding_gene TRUE TRUE AT5G67220.1 nitrogen regulation family protein similar to FAD binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G49640.1); similar to Os06g0712900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058562.1); similar to putative PP35 [Oryza sativa (japonica cultivar-group)] (GB:BAD54069.1); contains InterPro domain Dihydrouridine synthase, DuS; (InterPro:IPR001269); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009) 0.73813533290134 9.19134984538925 2.27235302145448e-06 8.45552987099133e-05 13.3492112815210 17.8062389793953 0.73813533290134 0.0202036008338542 AT5G48630_at 6.84301154281401 6.90562345276299 7.64828884470703 7.47636231328628 7.99476976159847 7.5307033778209 7.65754868748143 7.56095634805604 6.39896441531948 6.42422261547418 7.77541674373607 8.10796508926975 7.6307885089075 7.78381997825613 8.34509702646509 7.72735562566569 7.57390373770327 7.5413594513366 6.57683124417577 0.201331860016139 0.180383609865345 0.189303242804551 0.192334138799394 0.180934862709949 0.189674010895834 0.179471366955597 0.179877354988449 0.195459135796017 0.187894954049481 0.181238565913473 0.182785797200022 0.1820258883513 0.186877373443197 0.183053312125332 0.180073294582915 0.200584267304719 0.188026854862745 0.179575605640273 5 5|0 -|/ 19739083 19739914 19739498.111 19738772 19740460 - gene protein_coding_gene TRUE TRUE AT5G48630.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48640.1); similar to G1/S-specific cyclin C-type (GB:P93411); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.882393289209461 9.19067577893501 2.27393599407141e-06 8.45552987099133e-05 13.3485619580842 14.5908510553112 0.882393289209461 0.0879292555468332 AT5G55530_at 8.5910065465284 9.14815434067522 8.95226635268182 9.0102496691814 9.8793971585638 9.75746559592205 8.11620966368191 8.53091849350801 7.30715672877665 7.34189082305689 8.38697857496999 8.78209917507924 8.20244096418333 8.66493149905675 8.35227658149822 8.23282295355227 7.50673983238593 8.49772316835728 6.71495774632649 0.176034836403139 0.173092165828726 0.177734580152988 0.179126923700504 0.175548567971445 0.175320982552080 0.180210260649289 0.174867176231344 0.191434471974733 0.199215105949497 0.173611909413800 0.174841676569483 0.175482619387189 0.174668799536316 0.173037300773277 0.173037300773277 0.213394906914705 0.173394131411421 0.185477265042235 5 5 + 22512318 22512856 22512590.818 22510166 22513182 + gene protein_coding_gene TRUE TRUE AT5G55530.1|AT5G55530.2|AT5G55530.3 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G50570.2); similar to C2 [Medicago truncatula] (GB:ABE81465.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.00509446361879 9.18944427005434 2.27683114779268e-06 8.4590406195373e-05 13.3473755281575 16.7230018241039 1.00509446361879 0.122444759693293 AT5G27840_at 7.60507094525854 7.67013242382265 8.30186066008548 8.3104666349241 8.61929706819948 8.27745174552167 7.50846754527552 7.40111673305292 7.72209152829294 7.16291419695962 8.30501542908931 8.09881344938608 8.29038028827312 8.28838138362652 8.0699499681023 8.43484677452276 8.16633174247417 8.19178636869696 7.43213592462051 0.122077910836979 0.122077910836979 0.126315410346986 0.123355122441692 0.131138330911577 0.135088920759508 0.122077910836979 0.1313303679629 0.143828035660556 0.135219947919096 0.122077910836979 0.126590463534076 0.124291574133887 0.122077910836979 0.125386836482066 0.124148778612613 0.132344683890176 0.122142377691432 0.130894454217782 5 5 - 9863487 9864205 9863870.455 9862927 9865042 - gene protein_coding_gene TRUE TRUE AT5G27840.1|AT5G27840.2 TOPP8 (Type one serine/threonine protein phosphatase 8); protein phosphatase type 1 encodes a serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) (TOPP8) [Arabidopsis Thaliana] (GB:O82734;GB:Q8LAG7;GB:Q94B49); similar to serine/threonine protein phosphatase, putative [Arabidopsis thaliana] (TAIR:AT3G05580.1); similar to serine threonine protein phosphatase [Phaseolus acutifolius] (GB:AAO69665.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.811356537113664 9.18842287015599 2.27923538742561e-06 8.46072304007838e-05 13.3463913925307 15.7966006655904 0.811356537113664 0.0630378735292469 AT5G24520_at 9.4500529972321 9.52941405126228 10.1621064026042 10.4027956121660 10.7249888380032 10.5298943354637 9.1792102928571 9.37385849547286 9.5436634891234 9.11223223893701 9.8688080542475 9.66921993591462 9.75068664194515 10.0866526719414 9.34047870854567 10.0685065053510 9.47840837977457 9.9373603532357 8.99314875339953 0.112886262813832 0.111067468052127 0.118036503207730 0.116722817521586 0.116866884972693 0.123083305857925 0.119986737166801 0.11694704816668 0.127515050138006 0.125939562254206 0.114913649695180 0.111067468052127 0.114100217220096 0.114888644646271 0.118867238626137 0.113356656137384 0.121586983224710 0.120706566925478 0.124127887790731 5 5 - 8371752 8372278 8371986.273 8370590 8372850 - gene protein_coding_gene TRUE TRUE AT5G24520.1|AT5G24520.2|AT5G24520.3 TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Identical to TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein) (TTG1) [Arabidopsis Thaliana] (GB:Q9XGN1;GB:Q5PP66;GB:Q9FT87); similar to ATAN11 (ANTHOCYANIN11), nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G12910.1); similar to transparenta testa glabra 1 protein [Matthiola incana] (GB:CAE53274.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.815239666867991 9.18260256124186 2.29298824353521e-06 8.50449361195732e-05 13.3407812873466 19.4147217865607 0.815239666867991 0.0647925674968375 AT5G11040_at 5.9408372352707 5.95511092568371 6.83531291506502 6.71260077026524 6.9169569238698 6.31743561749064 5.47125720661037 5.72477787639508 5.91000505459492 5.43901041235096 6.48727864120015 6.98951964473885 6.537518761748 6.50860835666255 6.65059957108437 6.44042049468263 6.33854927723693 6.65931335930731 5.30286424092893 0.186919670094456 0.187916806572294 0.191645550968185 0.189500267593346 0.193985746090340 0.207610416584395 0.192010048817162 0.189608967035286 0.194031364105540 0.201132253864993 0.19711952297204 0.185157188075187 0.186871384604320 0.196937028224952 0.195265297536432 0.195711268878914 0.199149154622036 0.197279252287184 0.191221261505289 5 5|0 +|/ 3499999 3500574 3500324.1 3495288 3500923 + gene protein_coding_gene TRUE TRUE AT5G11040.1 similar to Os04g0502200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053234.1); similar to H0311C03.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67557.1); similar to OSJNBa0029H02.30 [Oryza sativa (japonica cultivar-group)] (GB:CAE01639.1); contains domain TPR-like (SSF48452); contains domain FAMILY NOT NAMED (PTHR21512); contains domain gb def: Hypothetical protein T5K6_30 (PTHR21512:SF5) 0.97421509486185 9.17898761970936 2.30157528133433e-06 8.52904616802022e-05 13.3372950662026 12.2978374751434 0.97421509486185 0.114655804641584 AT5G02230_at 4.8912184761004 6.05948707060517 9.66570160570844 9.59842898498867 8.87919814206218 8.6734279809795 9.50875780960158 9.67175828402357 7.56275767391653 8.69610148885755 9.38125594150044 8.66808274529495 9.83965794211477 9.4167279677745 8.74100946712363 9.95407596771934 9.86309041521348 8.90290136980858 8.52263465103978 0.187605713237099 0.171766914993971 0.157866803144953 0.159120529474350 0.161650182549809 0.154294983913756 0.153541831455838 0.157304430479332 0.172519232330767 0.161000179214896 0.148761803647388 0.149556348188575 0.150851927871796 0.158529120201393 0.147616158011482 0.149223868375686 0.164104687565363 0.156073301540424 0.159103314945257 5 5|0 +|/ 449617 450472 450008.333 448103 450652 + gene protein_coding_gene TRUE TRUE AT5G02230.1|AT5G02230.2 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G59490.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 1.37836802874139 9.17310341319756 2.31562743032646e-06 8.57379179165814e-05 13.3316173741873 17.1716713767620 1.37836802874139 0.207542087379359 AT5G54640_at 7.02437679356327 6.95106154115232 7.61489697054434 7.9068558975017 8.39248577369795 8.06166263090382 7.13913259758442 7.36940708184184 8.39899747157843 7.52103908229209 9.16651823087905 9.16785250269932 8.84410046855907 8.86815668311203 9.20616615535786 9.086991596149 7.94312154728745 8.41871500359626 7.94915371413681 0.168564453125222 0.168896482122577 0.170261769728567 0.162894392830059 0.172567518929405 0.167946497780544 0.173133541995592 0.166607406778061 0.170955012435702 0.162894392830059 0.163814616867168 0.170650502186991 0.167950339663177 0.183006886453980 0.170337621816122 0.168926284010688 0.173751324579071 0.166777572593653 0.162894392830059 5 5|0 +|/ 22213768 22214475 22213996.5 22213703 22214718 + gene protein_coding_gene TRUE TRUE AT5G54640.1 RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein. Identical to Histone H2A.6 (Protein RESISTANT TO AGROBACTERIUM TRANSFORMATION 5) (HTA1) (RAT5) [Arabidopsis Thaliana] (GB:Q9LD28); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT4G27230.1); similar to Protein H2A.7 (wcH2A-4) (wcH2A-10) (GB:Q43312); similar to Os08g0427700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061844.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.877143416039527 9.16463755281098 2.33600824802960e-06 8.64187345527977e-05 13.3234420886347 15.9545346755774 0.877143416039527 0.0870596427879056 AT5G14680_at 7.89518911495933 7.8040281928861 8.57607820799238 8.54394349706044 8.71310995043804 8.92792945960817 7.68433349171363 7.89513051954549 7.02315205961504 7.73277198740968 8.22396998850502 7.93569864659565 8.30648635346506 8.23892024692288 7.6837485852659 8.17525701766128 8.08689774732045 8.25985168143738 7.46089643581977 0.150116138470451 0.153317234151766 0.155160518871396 0.151810925091205 0.165337804116890 0.1619105137892 0.153372578365681 0.156417565657295 0.176071168531711 0.154298769889853 0.150013868720324 0.153060749688532 0.151890151747571 0.162016334803332 0.157011745764052 0.146350978352426 0.162667584177991 0.149029125610397 0.151348974144452 5 5|0 -|/ 4731642 4732965 4732368.333 4730910 4733084 - gene protein_coding_gene TRUE TRUE AT5G14680.1 universal stress protein (USP) family protein similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT3G01520.1); similar to putative ethylene response protein [Capsicum chinense] (GB:CAJ13711.1); contains InterPro domain Universal stress protein (Usp); (InterPro:IPR006015); contains InterPro domain UspA; (InterPro:IPR006016) 0.789420952390248 9.16055857215357 2.34589736828084e-06 8.67105894084628e-05 13.3195003517442 16.0146981097812 0.789420952390248 0.0547043726581451 AT5G08080_at 7.28798182945833 7.4324926830417 8.06954952730357 8.06887401581667 8.40451435801674 8.11274932950048 7.55556235712065 7.61687754310872 7.79372570167538 7.97544622301734 8.95440760000107 8.9683960274391 8.73068359595154 8.99303167283377 8.76831657451349 8.80159680907699 8.63160910755765 8.69278303130612 7.98496581004424 0.152809342664707 0.139661307066128 0.143319093016004 0.145366887090551 0.136148270736661 0.14863545203485 0.140917740065421 0.136758355085138 0.147222967265517 0.133651707068693 0.138563105118049 0.147404563313697 0.137010814930445 0.141772409462494 0.143805863785585 0.138420858443969 0.146993642106343 0.141484745760211 0.138471436375519 5 0|5 /|+ 2590367 2591067 2590813.125 2588343 2591317 + gene protein_coding_gene TRUE TRUE AT5G08080.1|AT5G08080.2 SYP132 (syntaxin 132); t-SNARE member of SYP13 Gene Family Identical to Syntaxin-132 (AtSYP132) (SYP132) [Arabidopsis Thaliana] (GB:Q8VZU2;GB:Q9LEZ8); similar to SYP131 (syntaxin 131), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G03800.1); similar to syntaxin [Nicotiana benthamiana] (GB:ABI93942.1); similar to Os07g0164300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058959.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012)|Identical to Syntaxin-132 (AtSYP132) (SYP132) [Arabidopsis Thaliana] (GB:Q8VZU2;GB:Q9LEZ8); similar to SYP131 (syntaxin 131), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G03800.1); similar to syntaxin [Nicotiana benthamiana] (GB:ABI93942.1); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989) 0.795125172616495 9.15828311101982 2.35143372656839e-06 8.68038434608868e-05 13.3173006718031 16.1863996873778 0.795125172616495 0.057335762061617 AT5G18760_at 7.49843235563175 7.57939321424746 8.4539904586454 8.53478970848863 9.07161316139268 8.64707435065771 8.50368692450683 8.47957412365617 7.55522950043395 7.69176093213647 8.54081272881162 8.58997319467947 9.06065990182182 8.75206742494908 8.24010924790055 8.82402923706919 8.72945810612741 8.71628274561169 7.71984454376402 0.145190433585521 0.135919610117804 0.130716924794205 0.129311234621577 0.14156992778468 0.137018688389836 0.135351162013545 0.132255647287002 0.140166544980975 0.133988634322541 0.131208411724255 0.126547039357664 0.128462902507170 0.137559506561233 0.135030895106383 0.127046368643582 0.133845302115865 0.129452196867031 0.143503167022005 5 5 - 6258522 6259490 6259029.091 6258297 6260931 - gene protein_coding_gene TRUE TRUE AT5G18760.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G06330.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABE87296.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.84382883993938 9.15787654478157 2.35242442136687e-06 8.68038434608868e-05 13.3169075868475 16.5147121532281 0.84382883993938 0.0762025944929537 AT5G04040_at 9.15472898574059 9.30451724539813 9.85832513941598 10.0465816408031 10.3161229498525 10.1965697577373 9.1553638376624 9.09996574486132 9.29251759872932 9.21341865253788 9.81772503424727 9.78774565919943 9.82401574562372 10.1057536924391 9.35836301666632 10.0988641407515 9.77420720654364 9.82142701120796 9.09828295711037 0.0883551944096957 0.0849620530114248 0.0955691412106154 0.085685195811406 0.0846631819228595 0.0913253058130928 0.087633676819708 0.0931132230270168 0.0923994447262916 0.0858201505460083 0.085370588708513 0.083566993321948 0.0846701843554247 0.085293816015017 0.085945330296495 0.083566993321948 0.0855661338876819 0.0922145877888822 0.0843317764488486 5 5 + 1092415 1092965 1092673.091 1089651 1093178 + gene protein_coding_gene TRUE TRUE AT5G04040.1 SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. similar to SDP1-LIKE (SDP1-LIKE) [Arabidopsis thaliana] (TAIR:AT3G57140.2); similar to P0460E08.35 [Oryza sativa (japonica cultivar-group)] (GB:BAB61223.1); similar to phospholipase, patatin family, putative [Medicago truncatula] (GB:ABE78088.1); similar to Patatin [Medicago truncatula] (GB:ABE94194.1); contains InterPro domain Patatin; (InterPro:IPR002641) 0.773931102039472 9.15473556946736 2.36009341546438e-06 8.70127739048e-05 13.3138701611118 19.1539814582476 0.773931102039472 0.0474684076952261 AT5G43700_at 7.14851313704896 7.46072389166117 7.80038308838996 7.6450099475692 8.95795921253506 8.40836049392996 7.4628793256603 7.24551294576169 7.35488715500787 7.01547760816478 8.66213021504688 8.79819909045137 8.58270200590612 8.32471058663589 9.01853394011213 8.65800893358104 7.8595059799705 8.15596535899604 7.8510284637097 0.14907010895801 0.145580414625066 0.144310342003179 0.142027161471922 0.144143171715157 0.147552776012288 0.145411262699631 0.140984778133320 0.156860280537806 0.148669107621123 0.145548535220256 0.138764701673441 0.138909680226390 0.144487463896467 0.144379520148674 0.146013702637137 0.152081884821314 0.150457473211046 0.141660516308494 5 5|0 +|/ 17567704 17568362 17567937.889 17567460 17568808 + gene protein_coding_gene TRUE TRUE AT5G43700.1 ATAUX2-11 (indoleacetic acid-induced protein 4); transcription factor Auxin inducible protein similar to transcription factors. Identical to Auxin-responsive protein IAA4 (Indoleacetic acid-induced protein 4) (Auxin-induced protein AUX2-11) (IAA4) [Arabidopsis Thaliana] (GB:P33077); similar to SHY2 (SHORT HYPOCOTYL 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G04240.1); similar to Gbiaa-Re [Gossypium barbadense] (GB:AAQ74955.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.986929649391527 9.15293104048872 2.36451159908365e-06 8.71015991038192e-05 13.3121246406552 15.723468050052 0.986929649391527 0.118756770882037 AT5G01270_at 4.52031349526293 4.83920382825491 5.65357173099393 5.77631609583483 6.07158897428822 5.63314060923868 5.2319502824076 5.30947003272488 4.43841258111743 4.75196195588175 5.76561224491457 5.76188747956555 5.72168641225926 5.44755058222021 5.50403102087495 5.8304099888607 5.62318379261632 6.06728145955737 4.94183996414800 0.201552920981167 0.19556486529767 0.200705111898956 0.200809001488495 0.189427208315587 0.197197161343377 0.192412891555673 0.195859278486489 0.210868242265257 0.202267742689098 0.196617663549268 0.194866299084386 0.191284173607523 0.189427208315587 0.194661679639328 0.192193173808003 0.194310725253731 0.192091851906570 0.195311764076128 5 5|0 -|/ 108274 109366 108828.333 107728 112294 - gene protein_coding_gene TRUE TRUE AT5G01270.1 CPL2 (CTD phosphatase-like 2); double-stranded RNA binding Encodes a Ser-5 specific C-terminal domain phosphatase. similar to CPL1 (FIERY 2), double-stranded RNA binding [Arabidopsis thaliana] (TAIR:AT4G21670.1); similar to C-terminal domain phosphatase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82046.1); similar to Os02g0639000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047536.1); similar to OSIGBa0155K17.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86376.1); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 0.906443574242946 9.1279462339332 2.42661413680728e-06 8.93133902923022e-05 13.2879206463595 10.5924161509546 0.906443574242946 0.0971272293946963 AT5G61240_at 7.9251729596428 8.33754357147471 8.57753305419243 8.85442440353952 8.74131632398969 8.53153625212505 8.75727566475425 8.6901886748924 7.48850516095449 8.02250989263526 9.29097184824196 9.80602612275688 9.1865156965296 9.11729839460088 9.32847764994975 9.14827116628092 9.04883119903644 9.10095255508812 7.62018975783177 0.154116142448757 0.142262615292821 0.153709346986265 0.150713974853294 0.146314085907841 0.150290551797524 0.148128623009632 0.156633135414172 0.167776861504119 0.155176459389220 0.149366711327904 0.147531601013826 0.144287933509284 0.145535333806701 0.149858902264677 0.142522302328667 0.151732951800103 0.146561503360456 0.186268437999122 5 0|5 /|+ 24648097 24649160 24648654.429 24646506 24649437 + gene protein_coding_gene TRUE TRUE AT5G61240.1 protein binding similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G13910.1); similar to leucine-rich repeat resistance protein-like protein [Gossypium hirsutum] (GB:AAK70805.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.895836883012013 9.12532752463516 2.43322487726654e-06 8.94807437694764e-05 13.2853798613804 17.0337837045102 0.895836883012013 0.0940288472672772 AT5G09400_at 3.76244474212928 3.48479496674624 4.88822714181788 5.09726016702349 5.95902514551644 4.98186572017221 3.43821096158343 3.77179310643217 2.52370500739605 2.01580253849086 2.99531857354682 3.07157898673991 3.47508382439062 3.37581243163233 2.85418995431117 3.35827879925856 3.23685187334282 3.01579847849805 2.14053007951665 0.241728635120084 0.236309570435524 0.232668855016967 0.240532872795799 0.236024047895999 0.235496104286565 0.233419901226765 0.224292640316390 0.228208633085654 0.223776143286988 0.226106158970757 0.224712239447032 0.22920112953962 0.227134570237344 0.235557190622434 0.220540413915680 0.238075849187730 0.244126634244901 0.231244609376595 5 5 + 2916568 2917774 2917345.273 2916217 2920760 + gene protein_coding_gene TRUE TRUE AT5G09400.1 KUP7 (K+ uptake permease 7); potassium ion transporter potassium transporter Identical to Potassium transporter 7 (AtPOT7) (AtHAK7) (POT7) [Arabidopsis Thaliana] (GB:Q9FY75;GB:Q9M7K1); similar to KUP5 (K+ uptake permease 5), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT4G33530.1); similar to KUP10 (K+ transporter 10), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT1G31120.1); similar to potassium transporter family protein [Arabidopsis thaliana] (TAIR:AT1G60160.1); similar to putative potasium transporter [Oryza sativa (japonica cultivar-group)] (GB:CAD21005.1); similar to Probable potassium transporter 14 (OsHAK14) (GB:Q69RI8); similar to K+ potassium transporter [Medicago truncatula] (GB:ABE93376.1); contains InterPro domain K+ potassium transporter; (InterPro:IPR003855) 1.28173425307845 9.12444002809178 2.43546972356314e-06 8.94873958770551e-05 13.2845186051526 7.12272440576909 1.28173425307845 0.188534442469276 AT5G20090_at 10.6146128296169 10.6407912363967 11.3014325948916 11.3770587178834 11.1606271335702 11.1631996227646 10.3958776777716 10.6618967265666 9.92605378147724 10.2794390014301 11.1575697626326 11.0675041054398 11.1678851675672 11.0214512486200 10.7455264567934 11.1294946647703 11.0505616411360 10.9756058972948 10.2992978704397 0.0771102545451709 0.0772931550078446 0.0820210739389945 0.0789957298609123 0.0766780862734775 0.0773225254074842 0.0792465795196722 0.0790318282063227 0.101332347909226 0.079997918820851 0.084207814957587 0.0766780862734775 0.0771721327339673 0.0838908019736002 0.0797953454908603 0.0766780862734775 0.0826376230009057 0.082728487968536 0.0782809916379536 5 5|0 -|/ 6787557 6787958 6787708.75 6787004 6788656 - gene protein_coding_gene TRUE TRUE AT5G20090.1|AT5G20090.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14695.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22310.1); similar to brain protein 44-like [Zea mays] (GB:AAV28624.1); contains InterPro domain Protein of unknown function UPF0041; (InterPro:IPR005336) 0.771735608302795 9.11478155812785 2.46004564635304e-06 9.03138612404657e-05 13.2751401782803 21.5182937770064 0.771735608302795 0.0480759970226116 AT5G39500_at 4.74682738849162 4.76391942243268 4.81095028195887 5.30341863685261 5.86472490002274 5.65360911839493 4.8044766129309 5.19840877981784 5.320438893599 4.52627834436179 6.45085943686623 6.97383515576823 6.39824928179947 6.2430733103421 6.42047975813959 6.13635612509095 6.51039069676129 6.01875300621949 5.11236076340744 0.251694748313172 0.240183963683672 0.248842886495049 0.242828428394594 0.233549883153 0.243480424853942 0.254305533819000 0.243491768225556 0.254083608386566 0.255431635811775 0.238401005205072 0.24047953157389 0.238305732257171 0.247529380109869 0.243464194900493 0.23566728837942 0.242249499374695 0.234678991218613 0.258542203439239 5 5 + 15836595 15837092 15836806.545 15832502 15837273 + gene protein_coding_gene TRUE TRUE AT5G39500.1 pattern formation protein, putative similar to GN (GNOM) [Arabidopsis thaliana] (TAIR:AT1G13980.1); similar to sec7 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19610.1); similar to putative pattern formation protein GNOM [Oryza sativa (japonica cultivar-group)] (GB:BAD15695.1); similar to H0207B04.10 [Oryza sativa (indica cultivar-group)] (GB:CAH65909.1); similar to GNOM gene product (GB:AAA91150.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) 0.968703972986517 9.1105537328574 2.47088777774084e-06 9.06351560842324e-05 13.2710317499816 10.8334713576942 0.968703972986517 0.115126186440913 AT5G55700_at 6.21278762672256 6.69676527991973 7.26392663407078 7.46008530903693 8.23572521929978 7.91418765642415 6.20342963241744 5.88751384490165 5.39184144163756 5.60044835614372 5.85309545779335 6.177905914966 6.14817606138215 6.20388654228219 4.8152802143415 6.66584065513389 6.67400248785268 5.51010035483725 5.52986691725548 0.253965871184357 0.25178926157167 0.262181681807259 0.259537812839698 0.256357917297962 0.259105208356605 0.260862195151396 0.25178926157167 0.258654796240988 0.25178926157167 0.265515804007286 0.255644118611552 0.25178926157167 0.259943839097305 0.253393249834598 0.25178926157167 0.255979233908623 0.257871473572675 0.265232215504469 5 5|0 +|/ 22570817 22571885 22571289.1 22568975 22572190 + gene protein_coding_gene TRUE TRUE AT5G55700.1 BMY6 (beta-amylase 6); beta-amylase similar to CT-BMY (BETA-AMYLASE 8), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G17090.1); similar to beta-amylase PCT-BMYI [Solanum tuberosum] (GB:AAK84008.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) 0.983503749056136 9.09912954597542 2.50044463113175e-06 9.15671499700748e-05 13.2599204732803 12.7410134167254 0.983503749056136 0.119382858735157 AT5G20410_at 3.34436981506293 3.2314962624968 3.86757747590393 4.08230749864584 4.34065412840656 4.49774479818542 2.9843613576064 3.25467300702001 5.32458707888064 3.78373427991779 5.72801448225405 4.6308808932869 4.85039135092852 5.24070669061076 4.63025139022275 5.38577368021755 4.95545464875185 4.89004426918393 4.08476594188189 0.202887031906225 0.202127809892357 0.210508051255859 0.199690843695995 0.203195730262023 0.201950265503475 0.20194303418277 0.199690843695995 0.207327231192425 0.199690843695995 0.201406682198277 0.203211468925250 0.204213099479016 0.203489572224617 0.20606799686039 0.203584003887823 0.201326606046163 0.207370091025820 0.202471565798202 5 5|0 +|/ 6897746 6898534 6898257.111 6896578 6898785 + gene protein_coding_gene TRUE TRUE AT5G20410.1 MGD2 (monogalactosyldiacylglycerol synthase 2); 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glycosyl groups Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues similar to MGDC (monogalactosyldiacylglycerol synthase type C), 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] (TAIR:AT2G11810.1); similar to Monogalactosyldiacylglycerol synthase [Medicago truncatula] (GB:ABE87260.1); similar to Monogalactosyldiacylglycerol synthase [Medicago truncatula] (GB:ABE78336.1); contains InterPro domain Monogalactosyldiacylglycerol synthase; (InterPro:IPR009695) 0.81729488676375 9.09910076917988 2.50051956497874e-06 9.15671499700748e-05 13.2598924667622 8.41871576420372 0.81729488676375 0.0684814035465164 AT5G08520_at 9.21380581504754 9.3216127420299 9.40704602927878 9.4455745177006 9.99687296201765 9.79340208909164 8.28194822017339 8.57735382337061 8.73983802620852 8.44321538286608 9.56200203972462 9.48092613550332 9.13873447919183 9.37165737746124 9.50001362731458 9.28986386024984 9.25446107153917 9.03449825687019 8.38843022781493 0.127647267947719 0.127118587679167 0.127578188556676 0.129117662829092 0.132567053001671 0.133379784298378 0.128167883410883 0.125521843873582 0.155488675800992 0.138001675043555 0.126580990261077 0.126781245764607 0.134873858990722 0.134817832670505 0.123696174097558 0.125040416814653 0.137239403307573 0.131109303815774 0.145112098720012 5 0|5 /|- 2755471 2755922 2755648.2 2755176 2758363 - gene protein_coding_gene TRUE TRUE AT5G08520.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G23650.1); similar to H0101F08.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86209.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.808617738192738 9.09761690199744 2.50438680721587e-06 9.16313741153773e-05 13.2584481965800 18.1811257673113 0.808617738192738 0.0651595380112208 AT5G66060_at 5.84147765609264 5.89813116980976 6.04690683545913 6.28247833451166 6.96814805659741 6.36927246866005 5.66396153396227 5.86046682219234 4.78158266852288 5.16792890796709 6.69263487637651 7.15174886109101 5.9300074024615 6.72844954299078 6.9087439082983 6.10322055668583 5.56660677255608 5.60781034037668 5.02066590708461 0.219522143811244 0.201303079817456 0.209824035223109 0.207561895741343 0.202820858325549 0.226915855413085 0.203868226576879 0.207243045449305 0.232320809932681 0.204683945498492 0.206243444030053 0.201079636544563 0.205287973008731 0.216119553616293 0.201200791639249 0.201079636544563 0.21357247531836 0.207955301812384 0.202041827141136 5 5|0 +|/ 26437041 26438123 26437776.8 26436707 26438156 + gene protein_coding_gene TRUE TRUE AT5G66060.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT2G17720.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE81866.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.973392874852939 9.09383992229387 2.51425961595785e-06 9.19150384365426e-05 13.2547709241428 11.7794613315587 0.973392874852939 0.116856095552088 AT5G64280_at 7.38714162640034 7.50794933441593 8.23187472950526 8.43110378503486 8.57452257230334 8.48608087313623 7.63152095152564 7.7716573927062 7.97604335415392 7.90413485485262 8.73541566292425 8.40039028087373 8.56536479472032 8.71512663578745 8.2875824005184 8.89570321501619 8.6744012422818 8.68548147872136 7.91374931395139 0.159851857204773 0.145172236313812 0.149712792516646 0.147213431580936 0.145076962480784 0.147506812078274 0.144707133405492 0.144491605717273 0.148592882022783 0.139888634325029 0.144053842546963 0.150054151285861 0.13996396981175 0.147492430579334 0.144962372659946 0.146346309654786 0.162694795310791 0.143094394523484 0.146962340435992 5 5 - 25728618 25729193 25728932.818 25728295 25730699 - gene protein_coding_gene TRUE TRUE AT5G64280.1 DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2); oxoglutarate:malate antiporter similar to DCT/DIT2.1 (DICARBOXYLATE TRANSPORT), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64290.1); similar to plastidic general dicarboxylate transporter [Zea mays] (GB:BAD06220.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) 0.772476101634514 9.09078421636723 2.5222779218605e-06 9.21304859393952e-05 13.2517947480526 16.2783526022159 0.772476101634514 0.049478769241933 AT5G64813_at 4.57205091807526 4.7685560445244 5.51491808027656 5.29862458164259 6.11231751566322 5.54826186700554 4.63253289830544 4.23016067109981 5.2818256742728 4.69355697139914 5.62011212952707 5.77737598305548 5.98868258896129 5.84051651328862 5.86569313187306 6.05553296188066 5.70559698560495 5.73501841790493 4.55510252451712 0.223445595564897 0.223537280590314 0.228839476116719 0.229789313312174 0.232576698662345 0.234286491760996 0.226098682366506 0.219872785755980 0.232800849549456 0.235188887218953 0.222023025473141 0.2196353871724 0.225277326290100 0.240703945628498 0.221889799919032 0.223365765371293 0.238344448865281 0.218822504370525 0.235836140830493 5 5|0 +|/ 25929017 25929811 25929384.5 25927505 25930122 + gene protein_coding_gene TRUE TRUE AT5G64813.1 GTP-binding protein-related Identical to Putative GTP-binding protein At5g64813 [Arabidopsis Thaliana] (GB:Q9C5J9;GB:Q9LV96); similar to ATP binding / GTP binding / transcription factor binding [Arabidopsis thaliana] (TAIR:AT5G09910.1); similar to Sigma-54 factor, interaction re (GB:ABE87700.1); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 1.02388820521404 9.08665659303908 2.53315301328304e-06 9.2449831844421e-05 13.2477729378954 10.4182083949449 1.02388820521404 0.130131966794705 AT5G65620_at 10.0548988523590 9.9920121878559 10.9096898717322 10.7204719137266 10.5589054400887 10.4673686030353 9.6834504856698 9.78092915537211 10.1213886915076 10.0375609492807 10.7649910822521 10.8156057847939 10.7194158245498 10.7118114756967 10.7321144098964 10.8886076367457 10.4375532114792 10.817476441611 9.86611460173983 0.0705244936270738 0.0728584446984359 0.072246096467361 0.0735752334554517 0.0732728458172558 0.0731883531175234 0.0777553607688972 0.0751127419906081 0.0721783639254138 0.0733374284736814 0.0731358977348517 0.0705254412745446 0.0768455220664188 0.0802709530544628 0.0718731851551359 0.0714388584642361 0.0770124835427201 0.0758932414336753 0.0733690045569763 5 5|0 +|/ 26241907 26242790 26242378.857 26239158 26243129 + gene protein_coding_gene TRUE TRUE AT5G65620.1 peptidase M3 family protein / thimet oligopeptidase family protein similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT5G10540.1); similar to Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Medicago truncatula] (GB:ABE84181.1); similar to oligopeptidase A [Nostoc sp. PCC 7120] (GB:NP_484923.1); similar to Peptidase M3A and M3B, thimet/oligopeptidase F [Anabaena variabilis ATCC 29413] (GB:YP_324977.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567) 0.756939261350091 9.08122991514304 2.54752812051843e-06 9.28962695610122e-05 13.2424825490794 20.6431166791737 0.756939261350091 0.0415472683735016 AT5G24260_at 5.45028039547929 6.031957355942 6.56605525766285 6.33460591815544 7.07921533960288 6.43427522256011 4.76335120570295 4.79275826428517 5.33971810968704 5.52347202867362 6.24963844089528 6.76109402865493 5.74174779194523 6.56450681282435 6.2912622642404 6.39162554074391 5.7773098639805 6.34348045911023 5.19491797764995 0.235860674884133 0.217887325343244 0.230097721559565 0.230743021909730 0.221435665985345 0.231115417616848 0.23016699563182 0.225891400391597 0.254724011040129 0.221652774090373 0.229162929494669 0.222417521438820 0.217887325343244 0.232846154512002 0.233704461582309 0.224640025395396 0.231833860613306 0.236571225783032 0.219767341808403 5 5 - 8234949 8235392 8235128.182 8234726 8238247 - gene protein_coding_gene TRUE TRUE AT5G24260.1 prolyl oligopeptidase family protein similar to acylaminoacyl-peptidase-related [Arabidopsis thaliana] (TAIR:AT4G14570.1); similar to Esterase/lipase/thioesterase; Peptidase S9B, dipeptidylpeptidase IV N-terminal [Medicago truncatula] (GB:ABE80822.1); similar to Os02g0290600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046592.1); similar to Esterase/lipase/thioesterase; Peptidase S9B, dipeptidylpeptidase IV N-terminal [Medicago truncatula] (GB:ABE81707.1); contains InterPro domain Peptidase S9B, dipeptidylpeptidase IV N-terminal; (InterPro:IPR002469); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 1.12816578705273 9.07598277505112 2.56151173079217e-06 9.33276929211655e-05 13.2373641345400 11.7404552977419 1.12816578705273 0.155626993349913 AT5G58190_at 5.29986032493029 5.75535727482628 6.46820611904092 6.45994731822918 6.0822020383274 6.53116169839721 5.04173658680687 4.85045026541089 5.16400400466231 5.40960982922302 6.18114177545995 6.17480237557668 5.88041026567556 6.23404051438434 5.91023547973616 6.18129522970311 6.29692293291639 5.98543543199545 5.39235146714810 0.201258734400906 0.199241765172775 0.199241765172775 0.203157640303884 0.202213707545779 0.207094674257470 0.218677461486564 0.210704161069835 0.21171817663487 0.201111449282612 0.199241765172775 0.201934411471294 0.204284760593396 0.199241765172775 0.207308135487130 0.202780640149222 0.203691849010480 0.210867975360573 0.199425990714545 5 5|0 +|/ 23565444 23566521 23566101.667 23563555 23566831 + gene protein_coding_gene TRUE TRUE AT5G58190.1|AT5G58190.2 ECT10 similar to ECT5 [Arabidopsis thaliana] (TAIR:AT3G13060.2); similar to YT521-B-like protein [Medicago truncatula] (GB:ABE91083.1); similar to Os08g0556000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062472.1); similar to Os08g0224200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061275.1); contains InterPro domain YT521-B-like protein; (InterPro:IPR007275) 0.966037623754124 9.0712657946853 2.57415347895907e-06 9.370954262975e-05 13.2327603085316 11.5248771704255 0.966037623754124 0.115532738992794 AT5G45410_at 9.90124077453842 10.1059189065452 11.0171513057418 11.0121080429516 10.1859635997678 9.96210083916556 10.1735480320600 10.1730879012482 8.58747770319741 9.07381185607531 9.98779266252776 9.72615116385177 9.40640467251626 9.66482413815124 9.77509021563444 9.78003802563843 10.1390320783027 9.9774929883172 8.46755019023315 0.092143851210074 0.0913045433774451 0.0953410177652035 0.0963851792423437 0.0911669569416248 0.0934085288888466 0.0895723357304795 0.0925425664994028 0.112065560438784 0.0999833364509884 0.0904249868814518 0.0925234801797068 0.090747568920458 0.0891778920454625 0.0969855491043624 0.090439767575345 0.0981779426155483 0.0963847672763325 0.107332244304465 5 5 - 18419383 18419855 18419634.091 18419135 18421027 - gene protein_coding_gene TRUE TRUE AT5G45410.1|AT5G45410.2|AT5G45410.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25030.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67910.1) 0.776686018295454 9.06749638791265 2.58430428197008e-06 9.39356507274064e-05 13.2290795782052 19.5747481717287 0.776686018295454 0.0524995827005018 AT5G50780_at 4.30661511974135 3.98674822891774 5.26395425440906 5.1337449459603 5.61711324383098 6.15241309385223 3.46851869895197 3.96154498478559 4.10798036813317 4.46624466971567 4.86475396498387 4.78887200441066 5.03681005170764 4.52436822054524 4.34072398415519 5.2620195536933 5.31811973051701 5.49671910615412 4.76655558644042 0.242062592265714 0.241255154185611 0.251587694690382 0.235790890132204 0.239473340964917 0.236448742771866 0.248564654508587 0.240944912816597 0.252602191374957 0.244884585624051 0.24517726448315 0.247175592964492 0.237950258563275 0.240603662942897 0.255237605742271 0.242855747490741 0.242372944334113 0.238658920761188 0.236441449576543 5 5|0 +|/ 20671380 20672037 20671665.3 20667495 20672106 + gene protein_coding_gene TRUE TRUE AT5G50780.1 ATP-binding region, ATPase-like domain-containing protein similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24970.1); similar to Os02g0469300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046827.1); similar to OSIGBa0148D14.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66201.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK70637.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 1.05903553933589 9.06735063396016 2.58469765929493e-06 9.39356507274064e-05 13.2289372219853 9.43681917219814 1.05903553933589 0.139401964953073 AT5G06480_at 2.68748620362801 3.35779131333595 4.08091935976805 3.61578693742499 4.8066283461688 4.73251770246045 3.22832375921999 3.24800274483585 3.45594517970363 3.3471378052242 4.6459585037821 4.47268424782877 4.93634015056496 4.87976233240112 3.87224779998794 4.44484754671225 3.54233013386206 4.31659861163959 3.48695895108056 0.227983140259337 0.221626881873588 0.223750256162636 0.228354656921284 0.228092488396256 0.230734523318427 0.228609348859628 0.223526031683491 0.231094494799761 0.221674222449799 0.220743918484650 0.224834940007137 0.223983627197655 0.229956384016674 0.243539353197685 0.222819943460794 0.230033224313245 0.226646941988385 0.222714677101687 5 5|0 -|/ 1976235 1977159 1976602.889 1976087 1977291 - gene protein_coding_gene TRUE TRUE AT5G06480.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G11780.1); similar to Os03g0788200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051500.1); similar to putative ML domain protein [Nicotiana glauca] (GB:CAH69231.1); similar to Os07g0159800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058934.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) 1.06869713418925 9.06527654915647 2.59030247163931e-06 9.40244277381557e-05 13.2269112354743 7.62911211811367 1.06869713418925 0.141813705046774 AT5G67250_at 8.11172791887358 8.31139138153832 9.1609474516668 9.1354518358577 9.66395190220835 9.2496662433579 8.7039636011386 8.40265521342198 7.8952313261374 8.04450202284412 9.09845872495188 8.94335809732186 8.99276493402732 9.0132811059034 8.84222008215652 9.27008727606626 8.85184590199035 8.8559742356806 8.40779032749925 0.162152742016697 0.15256505067593 0.152534915860251 0.152943919936929 0.144610463411778 0.150926143993094 0.148087260449478 0.15319928034722 0.169256381436808 0.158112773750274 0.148916892072003 0.144610463411778 0.148401702963699 0.154204084013848 0.145560435497085 0.144894583268285 0.146919111950586 0.149713468298291 0.159650081898937 5 5 - 26848945 26849475 26849253.364 26848599 26850559 - gene protein_coding_gene TRUE TRUE AT5G67250.1 SKIP2 (SKP1 INTERACTING PARTNER 2); ubiquitin-protein ligase Encodes an SKP1 interacting partner (SKIP2). similar to VFB2 (VIER F-BOX PROTEINE 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G50080.1); similar to Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana tabacum] (GB:AAP03878.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.89386369939913 9.06428105526514 2.59299727731033e-06 9.40244277381557e-05 13.2259386602158 17.3921394536358 0.89386369939913 0.0952484563310274 AT5G09450_at 6.8841048186958 6.85616844121966 7.23241315315418 7.65210276970049 7.45188403331394 7.39373486475713 6.73998982724678 7.04221850935106 5.41639505325097 5.52742258421128 6.73640990663635 6.59166818309778 6.68628983026132 6.78259313419227 6.74648292942355 6.30538510629155 6.70740383171218 6.74278923821365 5.43460871391877 0.179175960353458 0.177720956068636 0.180653264852981 0.182635850236862 0.176355498115441 0.172004987659903 0.179751066792609 0.184621461171873 0.20506312491722 0.176170117373380 0.183227001846664 0.172004987659903 0.180324326636273 0.181621260099678 0.183422041813571 0.182282941980632 0.190125569761033 0.180811720771488 0.208159028623973 5 5 + 2942793 2943266 2943016.636 2941799 2943669 + gene protein_coding_gene TRUE TRUE AT5G09450.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G02820.1); similar to Os04g0450200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052937.1); similar to H0107B07.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66166.1); similar to OSJNBa0086B14.3 [Oryza sativa (japonica cultivar-group)] (GB:CAD40831.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.877407812810677 9.06404149717982 2.59364621532090e-06 9.40244277381557e-05 13.2257046011547 13.2175036623993 0.877407812810677 0.0901950743441931 AT5G24210_at 11.1880867632331 11.2170489311349 12.6910031192173 12.6567339574579 11.5941577705549 11.3523158571114 10.6075789526867 10.5627225514822 10.7386789530764 10.1922009917726 10.7494946193844 10.2113055791832 10.7484424237627 10.8849818420051 9.76284770877759 10.9444301699118 10.8827193906356 10.7674076340037 9.91456877378842 0.0823554392797534 0.0796039460460756 0.086474580822237 0.0871005889584402 0.0827392035462448 0.0846804591771471 0.0812109366121141 0.0796039460460756 0.0861415207729744 0.0820705390273432 0.0802899955195408 0.0829502726210853 0.0816067898115394 0.0810440127544087 0.0823513318994076 0.0817768630876611 0.0826630512120074 0.0860301283223409 0.0828732370304432 5 5|0 +|/ 8218759 8219350 8219054.2 8217341 8219622 + gene protein_coding_gene TRUE TRUE AT5G24210.1 lipase class 3 family protein similar to triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT5G24200.1); similar to Os02g0286200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046574.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84413.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.758415403931677 9.0630225839218 2.59640831240691e-06 9.40459251019748e-05 13.2247090068221 21.9340909431117 0.758415403931677 0.0432680926183028 AT5G19250_at 11.2050627841502 11.4116463653267 11.3850042803325 11.4652227848611 11.285226116118 11.0287316702387 10.6548343544646 10.6294326027134 11.1265637839864 10.5886110771285 12.0756531098515 12.3368431809738 11.9492578261168 12.1693998452601 12.0262619167508 11.7636192205622 11.4819887972287 11.9669554122912 10.4052350997033 0.0798666677922859 0.0816576642136134 0.0818099306066152 0.0824994693655445 0.081606066709631 0.0878289389234264 0.0820504134878076 0.08318516586661 0.092563178780848 0.0799476871580856 0.0798666677922859 0.0798666677922859 0.0817916857414175 0.0806499064281663 0.0820444307947824 0.0798666677922859 0.0896839700916116 0.0880002161123406 0.0824033674547166 5 0|5 /|+ 6472310 6472730 6472532.3 6471908 6472947 + gene protein_coding_gene TRUE TRUE AT5G19250.1 Identical to Putative GPI-anchored protein At5g19250 precursor [Arabidopsis Thaliana] (GB:P59833;GB:Q67ZQ2;GB:Q6ID89); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06035.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC07018.1); contains domain PR-1-like (SSF55797) 0.790123139790264 9.06144708762835 2.60068548608664e-06 9.41222191863652e-05 13.2231693439895 22.4721704867267 0.790123139790264 0.0588249520504153 AT5G02710_at 7.48148194983643 7.50908520452272 8.4166878486235 8.16903996270299 9.05237674802863 8.44375006129957 7.72194244237612 7.65436895174937 6.47727911349803 6.99992739663915 7.72433578382158 8.13795579510882 7.80543224585963 7.51607871357908 8.45495399902827 7.97475092127294 8.25275177355131 7.10209342427176 7.1580802487142 0.183825913245470 0.181280115003546 0.184703770004846 0.185220093257069 0.202620608186821 0.194205880107951 0.195478081168996 0.179595384892876 0.19646244507243 0.184244618924373 0.192585159065582 0.185838836698553 0.188759613707134 0.186177488930002 0.177659451901230 0.177659451901230 0.197203048619271 0.187983022984261 0.19666389809948 5 5|0 +|/ 612633 613443 613076.556 612568 614497 + gene protein_coding_gene TRUE TRUE AT5G02710.1 similar to Uncharacterised protein family containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96102.1); similar to Os03g0363400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050164.1); contains InterPro domain Protein of unknown function UPF0153; (InterPro:IPR005358) 0.960679590243528 9.06000449469026 2.60460854891522e-06 9.41855809603759e-05 13.2217593236552 15.4308281469818 0.960679590243528 0.114410472735748 AT5G12040_at 8.59709999000967 8.85103936465999 9.37131107241191 9.59241985772825 9.31366383152199 9.11763704780739 8.97410348637831 8.89010728380895 8.46177441562314 8.72697294410628 9.7676318545044 9.96308727968633 9.58590112175976 9.71791756393487 9.8283354796585 9.79213564000063 9.59857794387047 9.7385495161409 8.73043268286038 0.145897026151332 0.134033332112372 0.144537330381824 0.130268865645676 0.135371576231847 0.145247271415166 0.135756959823177 0.135387908154849 0.160690657727412 0.136076792985201 0.135425768628043 0.133509498331772 0.131986243182001 0.130997906381135 0.133490162419528 0.135109809761589 0.141115640239531 0.141100019532647 0.139891342870905 5 5|0 +|/ 3885952 3887747 3887139.875 3885069 3888078 + gene protein_coding_gene TRUE TRUE AT5G12040.1|AT5G12040.2 carbon-nitrogen hydrolase family protein similar to nitrilase, putative [Arabidopsis thaliana] (TAIR:AT4G08790.1); similar to Os03g0175600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049134.1); similar to nitrilase family, member 2 [Homo sapiens] (GB:NP_064587.1); similar to Os06g0206000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057093.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010)|similar to nitrilase, putative [Arabidopsis thaliana] (TAIR:AT4G08790.1); similar to Os03g0175600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049134.1); similar to putative Nit protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD36201.1); similar to Os06g0206000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057093.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010) 0.814980395117187 9.05897400828797 2.60741483380864e-06 9.42054621354973e-05 13.2207519654417 18.2827946071947 0.814980395117187 0.0689739887867694 AT5G06530_at 10.8316212424727 10.9374733265960 12.3484494665640 12.3817519684683 12.7500568530478 12.1514579003463 11.8144122398044 11.7429409401231 11.7199697820469 11.6795521053969 12.7723477680613 12.0674501552549 12.6821247007745 12.7483369158805 11.1270264513814 11.9672238168828 12.1024321726519 12.3739036676106 10.9376296775067 0.118472207274437 0.113926342347473 0.112824564079465 0.118100206355914 0.120705562527202 0.134963313598645 0.120273610403274 0.116147068307018 0.124891427984700 0.114300631903294 0.120373148079088 0.116627078117836 0.112824564079465 0.116596469811617 0.123623644458910 0.112824564079465 0.123118140896315 0.118938048095994 0.117546817443971 5 5 - 1990080 1990773 1990387.182 1989748 1994913 - gene protein_coding_gene TRUE TRUE AT5G06530.1|AT5G06530.2|AT5G06530.3 ABC transporter family protein Identical to White-brown complex homolog protein 23 (WBC23) [Arabidopsis Thaliana] (GB:Q93YS4;GB:Q94EX0;GB:Q9FG17); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G52310.1); similar to Putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:AAM51832.1); similar to Os03g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049014.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.930352813801481 9.05820767121855 2.60950389490104e-06 9.42054621354973e-05 13.2200027526882 23.7076819393674 0.930352813801481 0.106078778604884 AT5G49000_at 4.75336264283326 5.2515753277233 6.06183471005163 6.11370954503438 5.93619071822939 5.91895213188956 4.84706059789635 5.01989653758775 4.36362677328167 4.57983058937497 5.25870810626875 5.42383526609907 5.1732536257722 5.15913328339235 4.88581596001348 5.67299881700621 5.3408134212151 5.32821306140285 4.72729883719872 0.182366667536280 0.181176931239268 0.183919207761585 0.181201439316391 0.180814338440765 0.180250673230844 0.179735814224220 0.180317127455457 0.185205805474656 0.175804792264331 0.180152022227479 0.175388530951056 0.175602748979032 0.186129743345879 0.192159086263378 0.174670299283381 0.187111790934015 0.17431800919181 0.180253568864479 5 5 + 19882364 19882834 19882618.818 19881739 19882981 + gene protein_coding_gene TRUE TRUE AT5G49000.1 similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39550.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.881562854576104 9.05550780881004 2.61687827492941e-06 9.43930885454475e-05 13.2173627085375 10.4064553643714 0.881562854576104 0.091747751323135 AT5G65110_at 8.99159401248773 9.0316978694435 9.94281651435952 10.0107173741381 10.0084682192293 9.73187098800694 8.85248211344205 8.92366146468102 9.09991473578366 8.9234660665706 9.2958680349003 9.49936773370074 9.4674875213582 9.51430572145247 9.23699524717412 9.7541623311262 9.60450718164765 9.44176936691868 8.6906654874904 0.111716828399812 0.107807017025504 0.117728119788767 0.107154364138824 0.106206247427135 0.117333428542558 0.108296178780633 0.108902913495012 0.120332185679554 0.118074237185005 0.106946500719819 0.107287466657726 0.107768990753306 0.116119032527037 0.106881319469353 0.106574476042786 0.107083514370920 0.113831391615829 0.115437312280572 5 5|0 -|/ 26027071 26027822 26027367.111 26026861 26029745 - gene protein_coding_gene TRUE TRUE AT5G65110.1|AT5G65110.2 ACX2 (ACYL-COA OXIDASE 2); acyl-CoA oxidase Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. Identical to Acyl-coenzyme A oxidase 2, peroxisomal precursor (EC 1.3.3.6) (AOX 2) (Long-chain acyl-CoA oxidase) (AtCX2) (ACX2) [Arabidopsis Thaliana] (GB:O65201;GB:Q9FJQ4); similar to ACX6 (ACYL-COA OXIDASE 6), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06310.1); similar to ACX3 (ACYL-COA OXIDASE 3), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06290.1); similar to Acyl-coenzyme A oxidase, peroxisomal precursor (AOX) (Long-chain acyl-CoA oxidase) (GB:O64894); similar to acyl-CoA oxidase homolog [Phalaenopsis sp. 'True Lady'] (GB:AAB67883.1); similar to acyl-CoA oxidase [Petroselinum crispum] (GB:AAF14635.1); contains InterPro domain Acyl-CoA oxidase, C-terminal; (InterPro:IPR002655); contains InterPro domain Acyl-CoA oxidase; (InterPro:IPR012258); contains InterPro domain Acyl-CoA dehydrogenase, middle and N-terminal; (InterPro:IPR009100); contains InterPro domain Acyl-CoA dehydrogenase, central region; (InterPro:IPR006091); contains InterPro domain Acyl-CoA dehydrogenase, type 1; (InterPro:IPR006090); contains InterPro domain Acyl-CoA dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764)|Identical to Acyl-coenzyme A oxidase 2, peroxisomal precursor (EC 1.3.3.6) (AOX 2) (Long-chain acyl-CoA oxidase) (AtCX2) (ACX2) [Arabidopsis Thaliana] (GB:O65201;GB:Q9FJQ4); similar to ACX6 (ACYL-COA OXIDASE 6), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06310.1); similar to Acyl-coenzyme A oxidase, peroxisomal precursor (AOX) (Long-chain acyl-CoA oxidase) (GB:O64894); similar to acyl-CoA oxidase [Phalaenopsis cv. 'True Lady'] (GB:AAR00586.1); similar to acyl-CoA oxidase [Petroselinum crispum] (GB:AAF14635.1); contains InterPro domain Acyl-CoA oxidase, C-terminal; (InterPro:IPR002655); contains InterPro domain Acyl-CoA oxidase; (InterPro:IPR012258); contains InterPro domain Acyl-CoA dehydrogenase, middle and N-terminal; (InterPro:IPR009100); contains InterPro domain Acyl-CoA dehydrogenase C-terminal-like; (InterPro:IPR009075); contains InterPro domain Acyl-CoA dehydrogenase, central region; (InterPro:IPR006091); contains InterPro domain Acyl-CoA dehydrogenase, type 1; (InterPro:IPR006090); contains InterPro domain Acyl-CoA dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764) 0.772867602294895 9.05259424265971 2.62486170486101e-06 9.4602353725516e-05 13.2145128004555 18.6274085639233 0.772867602294895 0.0512754206857598 AT5G53110_at 4.05069828864727 4.3726869888703 4.98571283185024 5.35637170042663 4.79871499693997 4.43677939582408 1.3703037404364 1.51446625056453 1.92917297006767 1.38704401218463 1.09648712333383 1.80682104030257 1.47047978989900 1.66246659813897 1.10798121890917 1.34789551094249 1.32656711389523 1.83187161193256 1.62592977865965 0.286513219434808 0.298604254380045 0.310841408913219 0.311147756205812 0.299046001694501 0.299223669158126 0.283535003953748 0.29731851877915 0.283248478466755 0.288023207033971 0.288847494025216 0.287234034219169 0.284975308669035 0.287510955399759 0.284381349278794 0.286275043463668 0.297051145117210 0.285664746779147 0.284739449373652 5 5 + 21546378 21546810 21546640.091 21546248 21546970 + gene protein_coding_gene TRUE TRUE AT5G53110.1 similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G46495.1); similar to unnamed protein product; gb|AAF25996.1 gene_id:MFH8.3 similar to unknown protein, putative [Medicago truncatula] (GB:ABE89187.1) 0.938147455706256 9.0514078534521 2.62812007420525e-06 9.46411173383296e-05 13.2133520662218 5.4125685264732 0.938147455706256 0.108466064669329 AT5G65205_at 3.72322805658866 4.15054346054489 4.65380699823995 4.61245397678585 4.32167612158373 4.51553769738611 3.59516420836057 3.27322239587476 3.70667365357246 3.85088372346921 4.89471170785552 4.49795824257487 4.26064328908574 4.61511106439567 4.86731172292064 4.87479439577848 4.90350865768101 4.67580456534857 3.63684392038745 0.194694261214735 0.194757518474027 0.198553604265876 0.200538922443322 0.198846630939100 0.201132777333927 0.201843329947128 0.193873225617043 0.192190820671191 0.193244074398556 0.192190820671191 0.194934042478609 0.194505797533941 0.201150084288755 0.194116990585811 0.195290760793527 0.201036002422645 0.198381782860106 0.192190820671191 5 5|0 -|/ 26068213 26068951 26068558.3 26068036 26069260 - gene protein_coding_gene TRUE TRUE AT5G65205.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G10050.1); similar to 117M18_6 [Brassica rapa] (GB:AAZ66925.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.903796262359357 9.04674784690933 2.64096107240163e-06 9.50246098696043e-05 13.2087913376628 8.32080289184461 0.903796262359357 0.098737864925137 AT5G10010_at 5.19634728736165 5.87391666018867 6.50734642679459 6.41981135541094 6.06492348444502 6.29614137202285 6.18596279329146 6.07070276230204 5.16024549911041 5.06383647485958 6.40665284846341 7.46401799304672 6.41029150179156 5.8961539018271 7.1625347829303 6.49808348544399 6.59392260862729 6.42929287982952 5.04416120251385 0.248836343375224 0.237519318144604 0.241962046276384 0.247990607760521 0.241264781986029 0.249040453228805 0.236326980019888 0.242619974950730 0.257219502817977 0.242388866983846 0.245585842058161 0.236326980019888 0.242620597054943 0.244335767057515 0.243316535686358 0.236326980019888 0.247909098817858 0.244666829851661 0.242770304926221 5 5|0 +|/ 3129774 3131403 3130900.714 3127907 3131728 + gene protein_coding_gene TRUE TRUE AT5G10010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64910.1); similar to 117M18_4 [Brassica rapa] (GB:AAZ66923.1) 1.00426382098305 9.04223079976114 2.65347304479685e-06 9.53956375420703e-05 13.2043682517802 11.9254105889303 1.00426382098305 0.126402096346489 AT5G54840_at 5.05373497962196 5.13413610754655 7.59551182627428 7.7639956863887 7.71500425131718 6.38153437753899 6.07232951335613 4.9226970229904 3.86043384755537 4.73272524168124 6.18131430988964 5.92007641625603 5.66562651863552 6.36461958068845 5.28544856080743 6.21419018132827 7.01119338501439 5.87812755178782 4.7209792391594 0.258712522510914 0.257223279579964 0.262130483739273 0.263907676610767 0.252621566996689 0.266591812041785 0.257875951228492 0.267918703519787 0.259668550822941 0.256875753239944 0.250849609338482 0.250849609338482 0.264884132031890 0.255480447745316 0.257812699271302 0.250849609338482 0.258092665489495 0.256397397526991 0.25989845678193 5 5|0 -|/ 22293843 22295248 22294296.111 22293739 22295643 - gene protein_coding_gene TRUE TRUE AT5G54840.1|AT5G54840.2 GTP-binding family protein similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G21700.3); similar to putative Septum-promoting GTP-binding protein 1 (GTPase spg1) [Oryza sativa (japonica cultivar-group)] (GB:BAC79616.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806)|similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G21700.3); similar to putative Septum-promoting GTP-binding protein 1 (GTPase spg1) [Oryza sativa (japonica cultivar-group)] (GB:BAC79616.1); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 1.84765779154332 9.03891295987004 2.66270419030682e-06 9.5648198358858e-05 13.2011180029175 11.5814283068874 1.84765779154332 0.306392190953998 AT5G59890_at 10.2892417055056 10.6509378446556 11.5127992164538 11.5479821976825 11.3403903331277 10.9989003532891 11.0051963700606 11.0838115265899 10.3662801508813 10.4349200825094 11.8215529907350 11.5385935237575 11.5165694949538 11.3663209478387 11.2362977238639 11.5208441743374 11.4897066321225 11.2622550926779 10.1882501872690 0.111753288981472 0.108505243333550 0.109504566738148 0.11032671952705 0.112275688026667 0.121162801253094 0.112263580961723 0.108505243333550 0.120417647829441 0.116277332686124 0.110806396218168 0.109815697967248 0.111384627432384 0.115168161733415 0.109911922717749 0.109806993163349 0.114279753100999 0.125790788456539 0.118339069818510 5 0|5 /|+ 24140346 24140796 24140550.778 24139638 24141138 + gene protein_coding_gene TRUE TRUE AT5G59890.1|AT5G59890.2 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding actin depolymerizing factor 4 (ADF4) mRNA, complete cds Identical to Actin-depolymerizing factor 4 (ADF-4) (AtADF4) (ADF4) [Arabidopsis Thaliana] (GB:Q9ZSK3;GB:Q94A13;GB:Q9FJE7); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.1); similar to Actin-depolymerizing factor 1 (ADF 1) (GB:Q9FVI2); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108)|Identical to Actin-depolymerizing factor 4 (ADF-4) (AtADF4) (ADF4) [Arabidopsis Thaliana] (GB:Q9ZSK3;GB:Q94A13;GB:Q9FJE7); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.2); similar to Actin-depolymerizing factor 1 (ADF 1) (GB:Q9FVI2); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) 0.865960964542317 9.03790733341535 2.66550898768593e-06 9.56696883743003e-05 13.2001326246595 21.9530746331318 0.865960964542317 0.0873639331439159 AT5G60190_at 2.06566041977148 2.50637784315182 3.06879300853229 3.06965764443885 3.61863592236069 3.39776889234631 2.12211160553551 2.28832336135469 1.96199366741547 1.99795193583318 2.97716819671006 2.88532442451725 3.20055792200208 2.70112343066904 2.39331700376801 2.80240872380911 2.57050979258501 2.74546528883913 2.27761712360088 0.211897197639524 0.211897197639524 0.21540885677397 0.213474462769493 0.211897197639524 0.216751376246435 0.213875417556953 0.213770679839021 0.225238959191244 0.213333040455037 0.218533944214121 0.221864936204451 0.211897197639524 0.219707612811635 0.211897197639524 0.212823375923523 0.222074580612692 0.212412179348436 0.213623450602736 5 5 + 24252626 24253052 24252823.727 24251767 24253389 + gene protein_coding_gene TRUE TRUE AT5G60190.1 Ulp1 protease family protein similar to Peptidase C48, SUMO/Sentrin/Ubl1 [Medicago truncatula] (GB:ABE81567.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) 0.874196165856055 9.03633588251604 2.66989834049270e-06 9.57479682102956e-05 13.1985925926432 5.19900204892594 0.874196165856055 0.0900285495406721 AT5G44000_at 9.12077654626416 9.10804861046575 10.0439502664561 9.91862002709852 10.1843423708664 9.9413421569796 9.61737199534675 9.33359678742392 9.11461805717761 9.13648126546932 9.86833793198496 9.81740216957623 9.7259806243787 10.0247943053371 9.78512423157279 10.1824760482569 10.0997864600772 10.0628614124006 8.90299917833048 0.108420691865104 0.106677204913657 0.116406020875386 0.109260892935897 0.104647085559920 0.109972141529889 0.104647085559920 0.109209660142020 0.109436098243172 0.113856706768400 0.108695635284713 0.107550154406186 0.108523596689172 0.107945374907194 0.107041020901585 0.107678814019742 0.108203025596717 0.107005653772535 0.115223360111698 5 5|0 -|/ 17719500 17720456 17719733.667 17719317 17721190 - gene protein_coding_gene TRUE TRUE AT5G44000.1 glutathione S-transferase C-terminal domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Os02g0814800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048496.1); similar to Glutathione S-transferase-like [Anabaena variabilis ATCC 29413] (GB:YP_322177.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.810797225715296 9.03404169957174 2.67632048653595e-06 9.58737371362824e-05 13.1963437920033 19.1571118775829 0.810797225715296 0.0682298911733713 AT5G40970_at 1.92243936180755 2.82093488678968 3.62962198381176 3.17421423836476 4.73919416744493 4.12477409017555 2.97365000531559 3.25978485460635 3.38021229196812 2.99276893873542 5.036957547321 4.76287794200903 4.61969411856124 4.86456725635969 4.24028126939298 4.72733997688525 4.43426106433626 4.65095314862152 2.92951499393211 0.219661089124382 0.219943058109255 0.217711038989341 0.224303918855249 0.218204649170918 0.226777602517296 0.239408533538479 0.221408694115455 0.220405730266311 0.217711038989341 0.223841543727308 0.221224188072611 0.219959910735011 0.218151358501362 0.222687697970333 0.217711038989341 0.220617813456253 0.221514175980153 0.221539901648340 5 5 + 16431323 16431410 16431365.636 16431266 16431732 + gene protein_coding_gene TRUE TRUE AT5G40970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27030.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92576.1); similar to Os04g0387900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052629.1); similar to Os02g0509500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046927.1) 1.36951665418839 9.03350408156372 2.67782786946122e-06 9.58737371362824e-05 13.1958167253259 7.21455100619673 1.36951665418839 0.2101082897449 AT5G08450_at 7.05708130590831 7.0785125571804 7.73609306885498 7.82727539404516 8.28674819045623 8.00333390723408 7.1989771612133 6.67297332697799 6.98852054093777 6.40665306142127 7.34573074379825 7.60419518563113 7.44236510082432 7.6458430046566 7.21071029128248 7.65155154905765 7.87339662272515 7.4866421517472 6.55317066487002 0.167962404586678 0.166887507279384 0.171303474608571 0.166323204982047 0.161887075727201 0.172102205791934 0.161087065430083 0.180363911605427 0.179145572315493 0.169747022972039 0.160923524448733 0.160923524448733 0.161728404611398 0.167671472561120 0.178850848814411 0.165524504599805 0.161327986185543 0.173799462116535 0.163095446227114 5 5|0 -|/ 2727989 2729023 2728497.667 2727822 2732894 - gene protein_coding_gene TRUE TRUE AT5G08450.1|AT5G08450.2|AT5G08450.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to Os07g0477500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059629.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80313.1); contains domain LCCL domain (SSF69848) 0.922291397233305 9.0281277155971 2.69295292049735e-06 9.63357057804237e-05 13.1905441309113 14.5736255741297 0.922291397233305 0.104662625801254 AT5G11060_at 10.0621871677582 10.0806241746009 11.0942563951488 11.0710831019791 11.3824665573973 10.9346268149247 10.3558709711604 10.1567757675618 9.8286328634504 9.84626246611902 10.6988502960108 10.3447817226448 10.5501396551730 10.6000921949198 10.0464197681170 10.7237096572483 10.6552764593647 10.4274310582658 9.56819512358178 0.0882582110234995 0.088515487360519 0.094242118525314 0.0887073955425244 0.088042420098806 0.0925618575447812 0.0892606738236589 0.0900692867073832 0.0947507837104596 0.0948517401613412 0.0945149868207526 0.0894802357021787 0.0896324063800643 0.0878585566980351 0.089690391838662 0.0878585566980351 0.097143145569508 0.099410037216569 0.0979235156587828 5 5 + 3511569 3512958 3512221.545 3510119 3513306 + gene protein_coding_gene TRUE TRUE AT5G11060.1 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription factor A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root. Identical to Homeobox protein knotted-1-like 4 (KNAT4) (KNAT4) [Arabidopsis Thaliana] (GB:P48001;GB:Q9FY59); similar to KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G25220.1); similar to Homeobox protein knotted-1-like 3 (KNAP3) (GB:O04136); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain KNOX2; (InterPro:IPR005541); contains InterPro domain KNOX1; (InterPro:IPR005540) 0.857442240421542 9.02602921612693 2.69888161415636e-06 9.64646883645022e-05 13.1884852741081 20.7690035784090 0.857442240421542 0.0849690045719481 AT5G57020_at 9.12115297095187 9.4230538942959 9.71256637115568 9.7101830955879 9.95991556956559 9.88837297126525 8.8473716470974 8.79741617030512 8.93949682613843 8.79650941537359 9.68403422704857 9.85855743894584 9.29050627609607 9.6446778907208 9.85221829247373 9.5258150953412 9.51844716342416 9.5280742679334 8.75145768205316 0.122605566708077 0.115492920668267 0.11666453195623 0.117534725902554 0.12261425198372 0.123542431804735 0.120027263641293 0.115492920668267 0.125850796879916 0.129801689684167 0.115492920668267 0.115492920668267 0.116407494581084 0.117976485088115 0.116872397135257 0.117645173284447 0.117224875963605 0.116605323232819 0.124782535891409 5 5 + 23093502 23093957 23093733.909 23092093 23094127 + gene protein_coding_gene TRUE TRUE AT5G57020.1 NMT1 (N-MYRISTOYLTRANSFERASE 1) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase. Identical to Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97) (Peptide N- myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase 1) (NMT1) [Arabidopsis Thaliana] (GB:Q9LTR9;GB:Q9M6E3); similar to N-myristoyltransferase-related [Arabidopsis thaliana] (TAIR:AT2G44175.1); similar to Os01g0708100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044024.1); similar to N-myristoyl transferase [Triticum aestivum] (GB:AAS67031.1); contains InterPro domain Myristoyl-CoA:protein N-myristoyltransferase; (InterPro:IPR000903) 0.777073760770306 9.0252776980914 2.70100824550237e-06 9.64646883645022e-05 13.1877478353103 18.6534770726213 0.777073760770306 0.05438536817679 AT5G07030_at 0.85138363794017 0.890468908659645 0.0835576157425176 0.166557902087142 -0.153284870587483 -0.0431482066966494 0.0521478358907214 0.539489938133455 0.80058312051375 0.0760053630992385 2.09678039307490 6.71560806766936 0.973244369241952 2.09348811883053 6.90002205502164 1.83785134407914 0.5288308339437 2.22889120673395 0.982808706149551 0.254690323400762 0.252907094389295 0.260921054834099 0.257053711405115 0.257239689262423 0.252907094389295 0.253485855578750 0.262078564399250 0.26126496282091 0.268724135573354 0.266640023096071 0.302466190629815 0.258054593013794 0.262590275856529 0.303008308827384 0.256684246529034 0.256677195703127 0.271522251831140 0.257114607285638 5 5|0 -|/ 2183627 2184405 2184002.7 2183361 2185973 - gene protein_coding_gene TRUE TRUE AT5G07030.1 pepsin A similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G54400.1); similar to Peptidase A1, pepsin [Medicago truncatula] (GB:ABE83791.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.8660442576503 9.02104170879239 2.71302917670444e-06 9.6814259662828e-05 13.1835900437789 2.06921590106048 0.8660442576503 0.0879092338726094 AT5G66760_at 8.76745540422221 8.8090619683302 9.66911241082433 9.67134083306023 9.29058823398626 9.05868428278825 8.87229524121709 8.90503561138405 8.33848424172115 8.66156998487155 9.4916456777651 9.61038741779353 9.40357884019359 9.45723565948932 9.45546363226031 9.44741160080385 9.13556112229518 9.32650235940087 8.49369759653066 0.129043979466979 0.124070666579359 0.130047224554635 0.130878713013643 0.125430705233198 0.129101730511996 0.126034573138056 0.131591729185079 0.144028021206857 0.128587728633628 0.127127331327740 0.128214828192622 0.127930969904277 0.127228292876922 0.127038851679206 0.127571432552026 0.132421466618258 0.129399197590769 0.132538368940042 5 5 + 26673489 26674406 26673959 26670884 26674762 + gene protein_coding_gene TRUE TRUE AT5G66760.1 SDH1-1 (Succinate dehydrogenase 1-1) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. Identical to Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit 1 of complex II) (SDH1-1) [Arabidopsis Thaliana] (GB:O82663); similar to SDH1-2 (Succinate dehydrogenase 1-2) [Arabidopsis thaliana] (TAIR:AT2G18450.1); similar to Succinate dehydrogenase, flavoprotein subunit (ISS) [Ostreococcus tauri] (GB:CAL56758.1); similar to succinate dehydrogenase flavoprotein subunit precursor [Cryptococcus neoformans var. neoformans JEC21] (GB:XP_572631.1); similar to hypothetical protein UM01172.1 [Ustilago maydis 521] (GB:XP_757319.1); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; (InterPro:IPR004112); contains InterPro domain Succinate dehydrogenase, flavoprotein subunit; (InterPro:IPR011281); contains InterPro domain Fumarate reductase/succinate dehydrogenase, FAD-binding site; (InterPro:IPR003952); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.751012699126073 9.0178587266464 2.72210001475115e-06 9.70580687108235e-05 13.1804645224478 18.0873920297889 0.751012699126073 0.0411664442360145 AT5G66510_at 9.22278848714347 9.09810209359387 9.75019789390109 9.7777107467294 9.51796983071163 9.49089499295615 9.33426608192213 9.18958669955 8.26494849738363 8.59863738785549 9.51992160384674 9.7094635131785 9.48359205475083 9.44484659130797 9.7082488366731 9.34505257385227 9.35580020567845 9.50735478516754 8.49782718019111 0.115466513289690 0.111606380880754 0.111406036722971 0.108617986655783 0.112280327127547 0.112493570711723 0.113667577335264 0.114948997965079 0.146615881858060 0.113958306205591 0.118418007764958 0.110813033526916 0.115760110301104 0.114940413662468 0.113539004700440 0.109807464554025 0.116008182174211 0.116525619285303 0.110515024224142 5 5 - 26567269 26568087 26567607.909 26566930 26568856 - gene protein_coding_gene TRUE TRUE AT5G66510.1|AT5G66510.2 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase|GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. similar to GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1), carbonate dehydratase [Arabidopsis thaliana] (TAIR:AT1G19580.1); similar to hypothetical protein [Thellun (GB:ABB45859.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) 0.739244095467854 9.01459074234155 2.73144728962621e-06 9.73113255044242e-05 13.1772543740531 18.4042342911636 0.739244095467854 0.0337207234052431 AT5G56240_at 7.80627775606059 8.08464989868599 8.56842441685685 8.57880758338292 8.9454275436973 8.6940714409276 7.90595909604856 8.02173885520527 6.51341016176067 7.52121837593628 8.15525504567943 8.12433521070853 8.49407886874775 7.926172644148 7.75623847357818 8.44289407885664 8.32654454209383 8.06372270639765 7.83262255804635 0.148405489812991 0.145202443170825 0.146438103000539 0.145572676693501 0.146490382530237 0.152536252908561 0.147443227048220 0.143561581398255 0.189180963966609 0.153085663271434 0.146124271499696 0.140685350352088 0.144637326133439 0.151662585267080 0.153616236404757 0.146063538874442 0.146267636797726 0.150841089537098 0.145853006605729 5 5 - 22777393 22777883 22777659.727 22777029 22781742 - gene protein_coding_gene TRUE TRUE AT5G56240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56250.1); similar to Os04g0471400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053056.1) 0.80704892120561 9.00027244406466 2.77281325193403e-06 9.87039368531957e-05 13.1631756162412 16.0507890212868 0.80704892120561 0.0679520469729318 AT5G01160_at 5.89839544519629 5.80251859929886 6.18524781442684 6.66582314966146 7.21993558954584 7.12108582921474 5.2266499516274 5.07102448719426 5.84182996025363 5.17789676276184 5.99658756639554 5.86004904497363 6.10591985573355 6.02353084616343 5.91684072550654 5.99760751907228 5.96303970017991 6.22791375503912 5.67665641102043 0.215316300025965 0.218083172070615 0.230544584574684 0.219465538705318 0.215120696758442 0.226787056773117 0.216896676358118 0.221224218504130 0.222253074286237 0.218132375234180 0.213635011740655 0.213458270545862 0.225008103415083 0.213458270545862 0.213458270545862 0.214404301961384 0.218443811720892 0.225340696449833 0.221498873515697 5 5 + 55146 55699 55362.818 54009 55855 + gene protein_coding_gene TRUE TRUE AT5G01160.1 e-cadherin binding protein-related similar to Os10g0494500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064945.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG13991.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.87217552841869 8.99645458475885 2.78395742402176e-06 9.89286070672329e-05 13.1594178134255 11.9372836939265 0.87217552841869 0.090607889206441 AT5G61960_at 8.06869249593122 8.24631757993078 8.78308421489517 8.8251704983398 8.94383620648886 8.6118722590867 8.6428014416443 8.40455660408068 7.32109412667852 7.84432643973774 8.81849682001933 9.00350664051963 8.73796416448682 8.75572258532878 8.7260768956425 9.22426193330682 8.99040960452198 8.40940798922851 7.69094129801589 0.142820900911249 0.132180865333114 0.142390525625563 0.131453471197852 0.139572833509294 0.145959723990030 0.137995263446654 0.145088437174870 0.160669236433526 0.140435198411981 0.140955971736590 0.134881215357916 0.136766733237442 0.133944408610540 0.134620627504252 0.134273388235560 0.146342292085012 0.144060329040673 0.146396785254688 5 5|0 -|/ 24896275 24897262 24896593.667 24895746 24901941 - gene protein_coding_gene TRUE TRUE AT5G61960.1|AT5G61960.2 AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1); RNA binding A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices. similar to (ARABIDOPSIS MEI2-LIKE), RNA binding [Arabidopsis thaliana] (TAIR:AT5G07290.1); similar to AML1 [Lycopersicon esculentum] (GB:AAT39005.1); similar to putative AML1 [Oryza sativa (japonica cultivar-group)] (GB:BAD46727.1); similar to Mei2-like protein [Hordeum vulgare subsp. vulgare] (GB:AAL85701.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA recognition motif 2; (InterPro:IPR007201); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.832421152646817 8.99585747496406 2.78570474653296e-06 9.89286070672329e-05 13.1588299510425 16.7918004711876 0.832421152646817 0.0774470550549458 AT5G09230_at 6.37218641293478 6.12191558535499 7.30689889884572 7.23630735207047 7.41999346764424 7.25817452031117 7.47728367596898 7.08266703462665 5.6499968144751 6.5777807152656 7.77696795669221 7.329479209693 7.49697014815079 7.42748520562652 7.43821854457576 7.34143355428062 7.56264143028252 7.13493589540777 6.55875224760092 0.181483910330319 0.175351751379350 0.170522112331066 0.179152994743629 0.170522112331066 0.179804942419646 0.177880313792312 0.170522112331066 0.187225370961667 0.17877014263414 0.17521485714473 0.170522112331066 0.172107963022528 0.180133915384720 0.176916747031573 0.17230448609332 0.177816884258570 0.178223295020737 0.177601071474463 5 0|5 /|+ 2872714 2873575 2873159.8 2871378 2873790 + gene protein_coding_gene TRUE TRUE AT5G09230.1|AT5G09230.2|AT5G09230.3|AT5G09230.4|AT5G09230.5|AT5G09230.6|AT5G09230.7 SRT2; DNA binding|SRT2 similar to SRT1 (SIRTUIN 1), DNA binding [Arabidopsis thaliana] (TAIR:AT5G55760.1); similar to Silent information regulator protein Sir2 [Medicago truncatula] (GB:ABE79263.1); contains InterPro domain Silent information regulator protein Sir2; (InterPro:IPR003000) 0.859085141569 8.99576690914265 2.78596987307344e-06 9.89286070672329e-05 13.1587407843748 13.8847749112376 0.859085141569 0.0864453203254563 AT5G50375_at 4.91765848976442 5.60080199402288 5.10967361417784 4.65378276960131 5.82467785548819 5.67956658074095 4.60525000720154 4.76183064114135 4.48152637342309 3.87739190148081 6.33902444646087 6.61016233907496 5.69955132926352 5.96826176890006 6.91721103412816 5.499008286631 4.77737149342151 6.41018418107566 4.27787691934954 0.263216939612151 0.261698819902485 0.268740257161086 0.269961655728081 0.262359843194244 0.271488220692878 0.267646670828165 0.262514746438157 0.277416469398225 0.266480863351688 0.272940098645886 0.261779763314994 0.262646840744409 0.269350170460838 0.273758926865597 0.265821146571276 0.264305089172137 0.265616994758727 0.270599124053031 5 5|0 +|/ 20530018 20531119 20530492.7 20528893 20531474 + gene protein_coding_gene TRUE TRUE AT5G50375.1 CPI1 (CYCLOPROPYL ISOMERASE) Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. Identical to Cycloeucalenol cycloisomerase (EC 5.5.1.9) (Cycloeucalenol-- obtusifoliol isomerase) (Cyclopropyl sterol isomerase) (CPI1) [Arabidopsis Thaliana] (GB:Q9M643); similar to hypothetical protein MtrDRAFT_AC126782g10v2 [Medicago truncatula] (GB:ABE78923.1) 1.08043585854392 8.98878648721236 2.80648717031754e-06 9.95756150689391e-05 13.1518654799209 10.2640862063276 1.08043585854392 0.146851569899558 AT5G52540_at 8.69733569539094 8.67602225717145 9.15322623009854 9.37666407669128 7.73734491120683 7.52514776086015 7.196410419699 7.2288084404833 8.12920865323615 7.05888851769111 8.44938801279113 8.92881774529825 7.70060675984533 8.32478221288037 9.0313738791935 8.34933065285192 7.08424840139468 8.3061705833863 6.49024418602092 0.189381142907778 0.188488225379850 0.207646675920219 0.193729991774246 0.193194141283462 0.214226897762960 0.196550099908475 0.205316087771359 0.191545477412798 0.196243636475379 0.193672509117174 0.191746864711844 0.18553090402722 0.194104617728857 0.189811940455004 0.188623928185967 0.204587194206909 0.203905073121801 0.218965089693409 5 0|5 /|- 21338937 21339381 21339142.333 21338654 21341006 - gene protein_coding_gene TRUE TRUE AT5G52540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24000.1); similar to Protein of unknown function DUF819 [Medicago truncatula] (GB:ABE85318.1); contains InterPro domain Protein of unknown function DUF819; (InterPro:IPR008537) 0.772088768416908 8.98322418519513 2.82295343940099e-06 0.000100056660116563 13.1463830887176 15.9478467572525 0.772088768416908 0.0537462197678527 AT5G58220_at 8.54973727300571 8.40853220331303 8.95300914676416 8.92774186959678 8.88984260528408 8.75024043026806 7.64548635979898 7.24392794645156 7.74931225970789 7.033701058409 8.23257088388036 8.23739956309815 7.77681629519188 8.05933367842967 8.20849719825135 7.77047991271875 8.23061042699162 8.25029762917869 7.26850411055358 0.148127684738842 0.145344609660245 0.146946340743496 0.148095093397252 0.147388921031353 0.145344609660245 0.148412340248666 0.153127316204775 0.155776133599221 0.160294745607684 0.149811550407652 0.151859244922253 0.158135984608563 0.148596699112752 0.148761604808821 0.151427047995463 0.149042130401379 0.157917607337692 0.158289079134473 5 5 - 23571775 23572439 23572037.727 23571612 23573109 - gene protein_coding_gene TRUE TRUE AT5G58220.1|AT5G58220.2|AT5G58220.3 steroid binding Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to Transthyretin precursor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96361.1); similar to Os03g0390700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050277.1); contains InterPro domain Transthyretin; (InterPro:IPR000895)|Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to Transthyretin precursor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96361.1); contains InterPro domain Transthyretin; (InterPro:IPR000895)|Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to putative transthyretin, having alternative splicing products [Oryza sativa (japonica cultivar-group)] (GB:AAR06356.1); contains InterPro domain Transthyretin; (InterPro:IPR000895) 0.831766228123342 8.9826495071221 2.82466063454880e-06 0.000100056660116563 13.1458164719549 16.1441929833225 0.831766228123342 0.0776464541343219 AT5G65000_at 6.75361210716072 7.35495417908759 7.69266390822405 7.97122541489375 8.0645290924313 7.66915768146626 6.46704963398306 6.74764342523345 5.60098883901115 5.61340142799338 6.55401033286528 7.03247304624166 6.9205564312284 6.78938869341953 6.61174724508223 6.87802990731538 6.38075108028769 6.89381182205114 5.75716782515856 0.249603207532042 0.233361898455515 0.253736110454874 0.240985651916540 0.24121093776258 0.241638603191869 0.248427200408051 0.239111480238926 0.259541350401155 0.232891077448900 0.239520038318436 0.231124713661072 0.235455226007701 0.237519914656353 0.233870453188468 0.232853712375153 0.260873153048658 0.239175257857944 0.246874749893467 5 5|0 -|/ 25982405 25983144 25982724.3 25982186 25984619 - gene protein_coding_gene TRUE TRUE AT5G65000.1|AT5G65000.2 nucleotide-sugar transporter family protein similar to ATPUP12 (Arabidopsis thaliana purine permease 12), purine transporter [Arabidopsis thaliana] (TAIR:AT5G41160.1); similar to Os02g0573300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047201.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97568.1); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271)|similar to AT4G18200/ATPUP7 (Arabidopsis thaliana purine permease 7), purine transporter [Arabidopsis thaliana] (TAIR:AT4G18197.1); similar to Os02g0573300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047201.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97568.1); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271) 1.05949461348901 8.97726270630567 2.84071768630009e-06 0.000100543298489772 13.1405034599380 13.5474954805762 1.05949461348901 0.142100982201660 AT5G13720_at 9.36797510666507 9.62843175116326 10.2972612083569 10.3713313738464 10.1007457034799 10.0998567036473 9.275413408392 9.48235137532576 9.26475305339164 9.19541214904878 10.1327667440343 9.6908499994516 10.1253392867423 9.84931423325648 9.7369301358317 10.1384703669330 9.8531848113405 10.105102832863 9.04126719700928 0.122575973633341 0.116066068566189 0.121499793434571 0.122541267216227 0.119062290832659 0.122018167109353 0.116846251743231 0.121562863707637 0.146169738690563 0.126421370438767 0.120066456088452 0.124838968217860 0.118394920470990 0.129680550701269 0.124384691520693 0.117843162574601 0.128004006042924 0.119478500290671 0.126872254888893 5 5 + 4428153 4428995 4428645.909 4427786 4429136 + gene protein_coding_gene TRUE TRUE AT5G13720.1 structural constituent of ribosome similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19390.1); similar to Os07g0656700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060506.1); similar to Os07g0656600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060505.1); similar to putative integral membrane protein [Methanococcus maripaludis S2] (GB:NP_987845.1); contains InterPro domain Uncharacterized protein UPF0114; (InterPro:IPR005134); contains InterPro domain Ribosomal protein L14b/L23e; (InterPro:IPR000218) 0.782803252551398 8.97348042944978 2.85205103253922e-06 0.000100850530444253 13.1367710756531 19.3884902960878 0.782803252551398 0.058977924540672 AT5G55990_at 9.3657984800505 9.67026312256053 10.0477437747110 9.8806269473635 10.3799188198611 10.0534366578253 9.18589668171957 9.44294018403473 8.81613416822809 8.93053897831429 10.2253992204273 10.0618568064713 10.271817715508 10.0407588684903 9.79224932248119 9.88417385941916 9.42834199923977 9.85371911221782 8.83114812428643 0.132798799972239 0.137618145984652 0.132890209890680 0.133483440904013 0.135328189576974 0.134526775241523 0.138992333084115 0.135122859255536 0.165174135372158 0.140868814054786 0.132798799972239 0.133694575708543 0.132798799972239 0.145357486876386 0.137668586343736 0.132798799972239 0.149801707579805 0.141281068030201 0.143215693910852 5 5|0 +|/ 22689501 22690768 22690284.7 22688678 22691081 + gene protein_coding_gene TRUE TRUE AT5G55990.1 CBL2 (calcineurin B-like protein 2); calcium ion binding Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family. Identical to Calcineurin B-like protein 2 (SOS3-like calcium-binding protein 1) (CBL2) [Arabidopsis Thaliana] (GB:Q8LAS7;GB:O81446); similar to ATCBL3 (CALCINEURIN B-LIKE 3) [Arabidopsis thaliana] (TAIR:AT4G26570.1); similar to calcineurin B-like protein 3 [Gossypium hirsutum] (GB:AAX20387.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 0.879861394468905 8.97281493820857 2.85405019667424e-06 0.000100850530444253 13.1361141992886 19.1553597685032 0.879861394468905 0.0937197206992612 AT5G37710_at 4.26817606692444 4.11912131931427 5.02707661549577 5.06699669916228 4.49272200192429 4.94363964853118 3.38705866491959 4.04697904120091 3.89650944023415 3.38464030016196 5.45378243653014 4.79835872399956 4.76146570086284 5.18256228399569 4.9036947714863 4.48717673182413 4.99755922907044 4.61810836221034 3.88306960559355 0.266138591961709 0.27321635774088 0.265602807633053 0.267693948059577 0.265602807633053 0.269117165673998 0.269395723708191 0.270089237173377 0.272085345753822 0.265826639271697 0.269783826455439 0.267282109741377 0.270661457403217 0.276671173223649 0.266921818911016 0.269473752797406 0.265602807633053 0.269810536258292 0.270664141151275 5 5|0 +|/ 14997619 14998559 14998163.7 14996389 14998630 + gene protein_coding_gene TRUE TRUE AT5G37710.1 lipase class 3 family protein / calmodulin-binding heat-shock protein, putative similar to lipase class 3 family protein / calmodulin-binding heat-shock protein, putative [Arabidopsis thaliana] (TAIR:AT3G49050.1); similar to calmodulin-binding heat-shock protein; CaMBP [Nicotiana tabacum] (GB:AAB34987.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921); contains InterPro domain Lipase 3, N-terminal; (InterPro:IPR005592) 1.05310352476140 8.9655785223691 2.875886976208e-06 0.000101539399256133 13.1289682955029 8.72984374651441 1.05310352476140 0.140870382356064 AT5G54720_at 3.96583111218576 3.75727989561712 4.91743648443609 4.99050075141217 4.45071370372127 4.14817665816538 3.46047892460722 2.97296320248386 2.36207263471209 2.15660635040120 3.52007267099297 3.00189549471513 2.55419463529403 3.33290895780355 2.99794357287314 2.54881316194485 3.01425987738723 2.87226769632906 2.15867739095617 0.240312287179977 0.23931246438203 0.238844878075286 0.244984120496123 0.237196432989711 0.243379979328087 0.233937452018638 0.236312505143877 0.23731669440421 0.236717386867588 0.243715032660104 0.233937452018638 0.236748599744545 0.24096198343462 0.237788207428030 0.236159498794204 0.234459251905630 0.243338641857438 0.241620530640679 5 5 - 22249551 22250042 22249815.818 22249421 22250175 - gene protein_coding_gene TRUE TRUE AT5G54720.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54710.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.921038832718954 8.95652590733914 2.90345956082851e-06 0.000102247225117501 13.1200207430481 6.68596257513226 0.921038832718954 0.106401494489423 AT5G53750_at 4.82269457384275 4.19319963134879 4.95336048387521 4.66178422508308 4.22413072268161 4.70045868333577 4.10292292901532 4.21657781982302 4.49601057299274 4.10198973354364 5.76680146872656 5.84194715239814 6.08194529066326 5.74276604358655 5.82588619338899 6.18498997168909 6.1231130064766 6.06961302582382 3.70734784956851 0.252627653043279 0.248454876998167 0.249317714993125 0.248454876998167 0.250126773538014 0.253990367145228 0.248454876998167 0.253481705083021 0.248454876998167 0.248454876998167 0.270223819599615 0.255570891540633 0.26239405576515 0.249099514617373 0.262445043979799 0.264760633267502 0.264052454284914 0.249834936867225 0.248454876998167 5 5 + 21835410 21835735 21835576.125 21834592 21836069 + gene protein_coding_gene TRUE TRUE AT5G53750.1 similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G27460.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93687.1); contains InterPro domain CBS; (InterPro:IPR000644) 1.07696742031447 8.95645674533433 2.90367131461629e-06 0.000102247225117501 13.1199523487585 9.51259887752357 1.07696742031447 0.146952489422733 AT5G16980_at 3.75438085390316 4.24199096445023 5.07095496185865 5.25978778535247 4.70033076879940 4.45257945819841 2.47352870957483 3.04080323425801 2.22122473927914 1.87759696995238 1.82783476478553 2.60421100791617 2.75376600264049 2.9476470761484 2.30708114571839 3.36103407492056 3.12667511420789 2.90548027250018 2.27209706657161 0.345884467926695 0.337545683294572 0.344819322437469 0.348157326529214 0.366700769328780 0.34945041813257 0.326670165233669 0.328555710664761 0.340015263189499 0.330750142074415 0.342020400563692 0.330302673265902 0.328945912510332 0.329662079641405 0.335830868620783 0.326670165233669 0.340154114025384 0.327037462782127 0.340452005598744 5 5|0 -|/ 5579326 5580015 5579755 5579146 5580783 - gene protein_coding_gene TRUE TRUE AT5G16980.1 NADP-dependent oxidoreductase, putative similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 1.049406946713 8.95629353645722 2.90417107868931e-06 0.000102247225117501 13.1197909494372 6.55072247919393 1.049406946713 0.140227952107297 AT5G10650_at 5.5342523851403 6.33788488949298 8.47349537922706 8.2201148239268 8.31069226074573 7.35904934285595 5.62953200742798 5.94305292229341 4.67034444424512 6.0331793925866 6.88196171613377 5.47995938775202 6.38284022461637 6.27157885970268 4.75254716704401 6.7082118267915 6.32610346489605 5.34026329404181 5.42540970210987 0.256422546104436 0.258100916836877 0.260126928093319 0.26145699699611 0.256422546104436 0.260229987169386 0.259502854802338 0.265649946859442 0.276127589809835 0.272435975474966 0.256422546104436 0.256422546104436 0.258374239907917 0.26604017804814 0.262417214927538 0.256422546104436 0.261713734954266 0.264840230429246 0.270416179757382 5 5 - 3365256 3366231 3365750 3365009 3368128 - gene protein_coding_gene TRUE TRUE AT5G10650.1|AT5G10650.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G24870.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE80412.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.43563973178765 8.95535716620306 2.90704015204285e-06 0.000102247225117501 13.1188649039716 12.6731314625235 1.43563973178765 0.226559324250553 AT5G35460_at 9.5304459740275 9.83312349259644 10.5921774501127 10.7180627266550 10.8954409714438 10.6468958451018 10.2374166467756 10.2459690449045 9.59967439869958 9.40164300548514 10.2940027760329 10.1311786988789 10.3885964637156 10.3972889866507 9.8543191507956 10.3055019075512 10.4388848469059 10.2710226986998 9.16415597262178 0.108696320665392 0.101044096417871 0.103030496264809 0.103485085115371 0.101750167650562 0.101378577074681 0.101380208178498 0.102172040734516 0.103547565106368 0.107748112202542 0.101614894236715 0.100128985308658 0.102498854518181 0.102438653336842 0.107282147820945 0.10072588604414 0.106087855890184 0.101211393580437 0.111815549912320 5 5 + 13691080 13691727 13691340 13689769 13691969 + gene protein_coding_gene TRUE TRUE AT5G35460.1 similar to conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS] (GB:XP_652190.1); similar to Os01g0585100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043423.1) 0.811506887151968 8.95513350932394 2.90772589926554e-06 0.000102247225117501 13.1186436988356 20.1617368023302 0.811506887151968 0.0712070223825805 AT5G42320_at 6.75080652996017 7.26100185969796 8.0479118217542 7.80952918520992 8.30941064685709 8.24144264951953 7.22938830710442 7.04208986289442 7.06264551785434 6.4745315114135 7.77657887107962 7.7698246886629 7.56278441427362 7.88262571372944 7.42036477307375 7.19029956405548 6.64122474996173 7.89231649497462 6.64715313999422 0.196808866942496 0.178986878723967 0.193243012006439 0.181328723495638 0.184668584373521 0.180644906954063 0.191533666339251 0.179332613457969 0.186183662394435 0.183150562115665 0.176422420005242 0.172264168072723 0.177282308765694 0.175587258519872 0.17979834714737 0.176920476281752 0.192537603482039 0.182354612706449 0.175467636721205 5 5 - 16935885 16936760 16936241.636 16935717 16938685 - gene protein_coding_gene TRUE TRUE AT5G42320.1 zinc carboxypeptidase family protein similar to Zinc carboxypeptidase family protein [Tetrahymena thermophila SB210] (GB:XP_001020811.1); similar to Os02g0119300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045700.1); contains InterPro domain Peptidase M14, carboxypeptidase A; (InterPro:IPR000834) 0.910072144113327 8.95208742626 2.91708286402483e-06 0.000102493128267883 13.1156304547973 14.7090038404483 0.910072144113327 0.103374042534016 AT5G15770_at 3.90549338526578 4.11769192462942 4.04045168506007 4.60450377189397 4.41885566075672 4.50247439987504 3.87456817453442 3.97059628868972 2.74059899001252 3.25014780458887 4.73014089778165 4.80302598716432 4.57688059747243 4.53653934729141 4.69150426381589 4.50075470282551 4.13242389905853 4.37054698043876 3.38542271609988 0.223790508018462 0.221974384961773 0.219193515440326 0.228824145949166 0.23284549719334 0.241369508939624 0.228776639198835 0.230368580895924 0.235050682718473 0.223963461122416 0.219318122053054 0.22486093931571 0.220188392967162 0.21768910171774 0.229294699084074 0.219400148650445 0.226189881174259 0.223370830518470 0.229441687607828 5 5 - 5144099 5144521 5144329.364 5144096 5144545 - gene protein_coding_gene TRUE TRUE AT5G15770.1 GCN5-related N-acetyltransferase (GNAT) family protein Encodes a putative glucose-6-phosphate acetyltransferase involved in UDP-N-acetylglucosamine biosynthesis. similar to hypothetical protein [Cleome spinosa] (GB:ABD96849.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.92091059184863 8.94874618704594 2.92738401822831e-06 0.000102771780888888 13.1123240526948 8.01338787202888 0.92091059184863 0.106593310472704 AT5G45760_at 5.6640936619024 5.89744148664704 6.74970249103158 6.10430924692833 7.67270102228434 7.0725834892621 5.83510876190221 5.62955779447612 5.64737413255156 5.32891630949045 6.66170757807563 6.93593699101531 6.70789308399795 6.6560360141782 6.00478326493701 7.02529800594399 6.79403078276186 6.19447873223946 5.49166464142759 0.223113812575988 0.216827684771192 0.209864771700435 0.215047877436300 0.217341848512657 0.215406195048268 0.212876092835956 0.224197405823426 0.224815170652162 0.213316173647465 0.218173287550388 0.209289100689940 0.209699271674862 0.218020860517572 0.224197970740069 0.21021505365034 0.217133500225194 0.223958232762195 0.215408814269425 5 5 + 18579507 18580141 18579822.636 18578338 18580422 + gene protein_coding_gene TRUE TRUE AT5G45760.1|AT5G45760.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative G-protein beta [Gossypium hirsutum] (GB:AAT64014.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.13823791581589 8.9475467235625 2.93109161200688e-06 0.000102818689523579 13.1111367930651 12.3841067032044 1.13823791581589 0.161727513697514 AT5G23230_at 3.67273453281113 3.83777628565616 4.6758313830458 4.82291059488316 6.09288161864403 6.41797616637606 3.98069254324241 4.62642512609764 2.71720103726389 2.9486593914633 3.13357274588748 2.56844021249062 3.64217679367191 3.4735199234755 2.96986653483713 3.90578889945176 4.03227363029751 3.33907109223360 2.83891576495636 0.254884304004265 0.24906687580345 0.251984001899615 0.258718750434422 0.266129104545092 0.276228986935987 0.254014504672982 0.249827363059627 0.251169771622689 0.252074323396807 0.250274840352564 0.257365147608975 0.255974068006656 0.250828878089917 0.261080459176558 0.24906687580345 0.259838967518011 0.249734351884904 0.255345642824291 5 5 - 7826022 7826518 7826296.545 7825885 7826614 - gene protein_coding_gene TRUE TRUE AT5G23230.1 isochorismatase hydrolase family protein similar to isochorismatase hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G23220.1); similar to isochorismatase hydrolase family protein [Musa acuminata] (GB:ABF70079.1); contains InterPro domain Isochorismatase hydrolase; (InterPro:IPR000868) 1.01057807496705 8.94436559031845 2.94094929176634e-06 0.000103081084527057 13.1079872524574 7.8749105948134 1.01057807496705 0.130828422595829 AT5G18280_at 3.95870829123201 3.52668993757566 3.85889708715771 4.10005002489406 3.59857166644217 4.20230118318342 3.62096340875884 3.99266370123593 3.91425839166707 3.14764553284628 5.90537525686152 5.84356430130635 5.63764335449758 5.60164965116838 6.03239039390138 4.81526895867272 5.5325659018182 4.39366391272518 3.3266202011595 0.20715962610457 0.201199562224730 0.202230120464397 0.208102455916641 0.205428879486348 0.206217523592744 0.201199562224730 0.209428112718346 0.207265923213265 0.218180951743741 0.201199562224730 0.201199562224730 0.213186158825101 0.203282934099838 0.207409590871987 0.204937191936028 0.212819781307909 0.204451235870414 0.203383325196886 5 5|0 -|/ 6050826 6051869 6051354.4 6050516 6054343 - gene protein_coding_gene TRUE TRUE AT5G18280.1 ATAPY2 (APYRASE 2) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. similar to ATAPY1 (APYRASE 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G04080.1); similar to PsAPY2 [Pisum sativum] (GB:BAB85978.1); similar to apyrase [Vigna unguiculata subsp. unguiculata] (GB:BAD80837.1); similar to apyrase-like protein [Medicago truncatula] (GB:AAO23007.1); contains InterPro domain Nucleoside phosphatase GDA1/CD39; (InterPro:IPR000407) 1.08631124843168 8.94235245115519 2.94720614925978e-06 0.000103165126853689 13.1059935256484 8.32390895835657 1.08631124843168 0.14961424261664 AT5G06370_at 8.57843586475142 8.77875132126388 9.34267647160786 9.48169577475554 9.6950559239674 9.45681781546634 8.5112029071248 8.6793100618482 7.27333893990073 8.02259314795404 8.44209021287736 8.436733649039 8.7739055431366 8.32474160884988 8.25848191603129 8.40579568566762 8.96321360638676 8.26005250522518 7.94731014487772 0.150075126113195 0.157002617751087 0.156942889649801 0.156421179326173 0.156071933963260 0.166668364984668 0.148983897166038 0.150958596806362 0.188617995483286 0.151433719024087 0.159153792736996 0.146892793024457 0.149801785749996 0.159803415900801 0.156400942566784 0.156927582777531 0.165879463887395 0.157794042825219 0.153066456757603 5 5 - 1947306 1947838 1947618 1947140 1948613 - gene protein_coding_gene TRUE TRUE AT5G06370.1 NC domain-containing protein similar to NC domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G02700.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU90086.1); contains InterPro domain NC; (InterPro:IPR007053) 0.796257943846546 8.94128734899468 2.95052232961448e-06 0.000103165126853689 13.1049385119803 17.1809303935044 0.796257943846546 0.0657767233524358 AT5G44240_at 6.88286351829489 7.1507705717804 8.34820157656735 8.39006508729767 8.77579923026225 7.82503347726712 7.12065019952062 6.28065565538929 6.57849818342411 6.29364547934642 7.84816455531223 8.16809153182169 7.51961752118086 7.80523801266071 7.59360508837995 7.80461943804153 7.67431048747457 7.71772001623191 6.31406803508087 0.227405459316992 0.220508890128992 0.230326006454295 0.223458090949490 0.221825614485262 0.232679063542002 0.218335761343922 0.222136704821139 0.224987989713177 0.227953743570009 0.218335761343922 0.221170825696958 0.221361105420438 0.221621525759782 0.227136908804548 0.218335761343922 0.238436876615576 0.222939879023811 0.232541187381854 5 5 + 17840049 17840754 17840497.545 17834846 17840933 + gene protein_coding_gene TRUE TRUE AT5G44240.1 haloacid dehalogenase-like hydrolase family protein Identical to Putative phospholipid-transporting ATPase 2 (EC 3.6.3.1) (Aminophospholipid flippase 2) (ALA2) [Arabidopsis Thaliana] (GB:P98205;GB:Q8W567); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G27870.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92769.1); similar to hypothetical protein DDBDRAFT_0190219 [Dictyostelium discoideum AX4] (GB:XP_645920.1); similar to phospholipid-translocating P-type ATPase, flippase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93313.2); contains InterPro domain Phospholipid-translocating P-type ATPase, flippase; (InterPro:IPR006539); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 1.42352839435322 8.94081744312261 2.95198665969604e-06 0.000103165126853689 13.1044730169185 14.6776672798833 1.42352839435322 0.224509538250203 AT5G20890_at 8.9354820207216 9.07032273896302 9.47039662946196 9.47516383494696 9.5648416788279 9.56526959766952 8.95800268666344 8.92577604274058 8.35558738046751 8.41350280886632 9.28442584763899 9.6120460283909 9.37474184043713 9.1028630113985 9.64170725895866 9.24498248953082 9.2490184426532 9.20902784204911 8.56089799343773 0.102174144746231 0.101661999248857 0.105591443771944 0.101351639953446 0.100335259210843 0.104601591635955 0.103598870358806 0.0978388254903948 0.117468970507436 0.103321524806105 0.105287603143372 0.100208807919523 0.0995349101553232 0.105701733944094 0.106889604186226 0.100816724187945 0.100186023179068 0.101688082092537 0.101991026267389 5 5|0 -|/ 7087100 7087711 7087405.556 7086655 7090083 - gene protein_coding_gene TRUE TRUE AT5G20890.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G11830.1); similar to chaperonin containing TCP1, subunit 2 (beta) [Gallus gallus] (GB:NP_001012551.1); similar to Protein kinase; GroEL-like chaperone, ATPase [Medicago truncatula] (GB:ABE90681.1); similar to Cct2-prov protein [Xenopus laevis] (GB:AAH42347.1); contains InterPro domain T-complex protein 1, beta subunit; (InterPro:IPR012716); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) 0.7215221319147 8.94053578317589 2.95286475141419e-06 0.000103165126853689 13.1041939890358 18.1372473984440 0.7215221319147 0.0240062969292613 AT5G35680_at 9.73770714940473 10.1009981851121 10.9644518597806 10.9256121718894 10.627587247313 10.5175270645303 10.3522759366923 10.3334237284952 9.39450193901177 9.5396607977657 10.3706079162708 10.3484705212130 10.4098725556619 10.4066151708749 10.2576148462001 10.5192730875977 10.4735063204919 10.3806025988607 9.35521965513958 0.124755791728517 0.119012349832682 0.114999910712230 0.118006638200668 0.111821801856295 0.115830642169587 0.111084507487129 0.111714805639764 0.128015058921143 0.118332401110924 0.116379245183182 0.114793310449776 0.11782622121291 0.121746613182969 0.113967851659013 0.120234271602823 0.123959567975103 0.116785446100585 0.123111883530505 5 5 - 13875463 13875692 13875598.727 13875151 13876243 - gene protein_coding_gene TRUE TRUE AT5G35680.1|AT5G35680.2 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative similar to eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative [Arabidopsis thaliana] (TAIR:AT2G04520.1); similar to putative translation initiation factor eIF-1A-like [Solanum tuberosum] (GB:ABB55392.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain S1, IF1 type; (InterPro:IPR006196); contains InterPro domain Eukaryotic initiation factor 1A (eIF-1A); (InterPro:IPR001253) 0.796859791229807 8.93856010808016 2.95903199556591e-06 0.000103297356530583 13.1022365284911 20.3577551717949 0.796859791229807 0.0661144800438032 AT5G48990_at 4.79890939776092 5.07956929409895 5.43186123155394 5.51752643898056 5.79185929261034 5.50450575321539 4.79933078521871 4.63443203670915 4.12673156297624 4.30014523388452 5.22597445254095 5.55670570215217 5.07324603984357 5.00938193038521 5.20521539936871 5.33285742093035 5.33810898832879 4.80131373496137 4.40544487686 0.217919288200761 0.214986984545247 0.217618000435046 0.215990752301154 0.229303531557107 0.229838238281087 0.216870065754280 0.215924598048857 0.227582086436692 0.217201993314124 0.215882874218423 0.214986984545247 0.216892355013068 0.218852732418065 0.218655493928281 0.214986984545247 0.222120476885436 0.214986984545247 0.215213600044439 5 5 + 19880089 19880654 19880404.636 19879515 19880851 + gene protein_coding_gene TRUE TRUE AT5G48990.1 kelch repeat-containing F-box family protein encodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation. similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G48980.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.82439385065005 8.9351987882235 2.96955674079948e-06 0.000103522193652728 13.0989052010105 9.9298947870039 0.82439385065005 0.0765895756367184 AT5G03450_at 4.22594484501057 4.68370193161591 5.32790616235031 5.45591894864624 5.36018704602218 5.6165844440387 4.5320293441256 4.37398812736966 4.06985639459468 4.27080856961359 4.59738919044541 5.19007113742942 4.97442162633021 4.79824200926584 4.99894854814942 4.8915639815152 4.90351927826195 4.89551054889612 4.0079572968763 0.190234191256589 0.190986036144695 0.193280893867235 0.199262556350152 0.193413399412975 0.201587256437535 0.196202641340371 0.196576107869950 0.204764109642765 0.195767620076259 0.194022303167504 0.195292711516954 0.190794570717694 0.193598910538678 0.206490169537184 0.199525575822293 0.209275268124807 0.188605018773130 0.188056471330569 5 0|5 /|- 859005 859411 859194.3 858768 862296 - gene protein_coding_gene TRUE TRUE AT5G03450.1 zinc finger (C3HC4-type RING finger) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03750.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN62783.1); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.888116978954548 8.93497848782873 2.97024794559567e-06 0.000103522193652728 13.0986868224496 9.4582404613465 0.888116978954548 0.097380040660396 AT5G58670_at 8.93052082217225 9.0999694766373 9.69950546938509 9.62153807520393 10.1508714390874 9.86263226234728 8.98148481289012 9.07676584879193 9.86634596591326 9.57725800555692 11.0151300983391 10.2994930282651 10.5810166207018 10.7521735611242 10.5171757005374 10.1840839352838 9.39964345498351 10.7125216406055 9.57567476624817 0.104604765935324 0.102884560419734 0.108179497266578 0.103635042991331 0.100606187072452 0.105776862052962 0.105059734827285 0.107938260696433 0.112609845292362 0.101287365658738 0.101742073584746 0.100606187072452 0.101060201366114 0.100606187072452 0.102624164036366 0.100606187072452 0.113947473416954 0.10384040280771 0.104854522966257 5 5 - 23721695 23722355 23721971.909 23721457 23724026 - gene protein_coding_gene TRUE TRUE AT5G58670.1 ATPLC1 (PHOSPHOLIPASE C 1); phospholipase C phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one). similar to ATPLC1 (PHOSPHOLIPASE C 1), phospholipase C [Arabidopsis thaliana] (TAIR:AT4G38530.1); similar to phosphoinositide-specific phospholipase C (GB:AAC48991.1); similar to phospholipase C [Nicotiana tabacum] (GB:ABJ99758.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.78550670689514 8.93296629166136 2.97656939568369e-06 0.000103659188133218 13.0966919302901 19.4807848595908 0.78550670689514 0.0616599522341794 AT5G26740_at 6.47442357831589 6.86404142408042 7.66365333526734 8.03329313926831 8.48762003292811 7.89063008895347 7.41591071221589 7.13781405840813 6.92868521417829 6.66200644352101 8.12121482811256 7.78080438482086 8.08249547291152 8.10709517706705 7.47351879428098 8.15932501901367 7.41921500813365 7.81890184284971 6.71070218367649 0.220236084576924 0.198776931711641 0.208357100067120 0.203066710332053 0.199418223323481 0.201491891366041 0.209112612761555 0.209885620665038 0.220318262137358 0.202763173357652 0.197003287792789 0.199149017172635 0.200400408906388 0.196851175659566 0.204553279874036 0.195307480875713 0.228032478670636 0.203753296830937 0.208945223088248 5 5 + 9293768 9294370 9294127.818 9291931 9294690 + gene protein_coding_gene TRUE TRUE AT5G26740.1|AT5G26740.2|AT5G26740.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05940.1); similar to Protein of unknown function [Medicago truncatula] (GB:ABD32854.1); contains InterPro domain Protein of unknown function DUF300; (InterPro:IPR005178) 1.07447087064469 8.9319045290938 2.979910867229e-06 0.000103692268095869 13.0956391169122 14.8146495943584 1.07447087064469 0.147062907403273 AT5G57160_at 5.68684417168863 5.7241019878234 6.44148843048966 6.51847930565166 6.92103836119592 6.57358108999301 5.22968412307908 4.88050908699759 5.72809796892944 5.73826959130809 6.04595267660405 6.14134630874929 6.10083705148471 5.83349769941072 6.01561872877301 6.24147852906545 6.29145189203141 6.14253165409687 5.4203558418018 0.202771788423101 0.206307638703383 0.212197531436189 0.211557025996892 0.206888205043768 0.210271501252301 0.200274559370528 0.205151372431037 0.222414395154755 0.209426634494510 0.199908567135668 0.201508657037932 0.204305002512912 0.214816873376933 0.204623070130694 0.205269814071060 0.213648646415476 0.210681391506112 0.202782691594127 5 5 - 23172385 23172920 23172585 23172194 23178972 - gene protein_coding_gene TRUE TRUE AT5G57160.1 ATLIG4 (Arabidopsis thaliana DNA ligase IV) Identical to DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) (LIG4) [Arabidopsis Thaliana] (GB:Q9LL84;GB:Q9LU70); similar to ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1), ATP binding / DNA ligase (ATP) [Arabidopsis thaliana] (TAIR:AT1G08130.1); similar to DNA ligase IV [Populus nigra] (GB:BAF03051.1); similar to OSIGBa0113I13.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66777.1); similar to Putative DNA ligase 4 (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) (GB:Q7X7E9); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain ATP dependent DNA ligase, central; (InterPro:IPR012310); contains InterPro domain ATP-dependent DNA ligase; (InterPro:IPR000977); contains InterPro domain ATP dependent DNA ligase, C-terminal; (InterPro:IPR012309); contains InterPro domain DNA ligase, N-terminal; (InterPro:IPR012308) 0.853021735641274 8.92984103083725 2.98641652828860e-06 0.000103835311338960 13.0935926523760 11.8622143787182 0.853021735641274 0.0865213614615806 AT5G19530_at 7.37639618884676 7.32429287630516 7.20342004344417 7.37178859638308 7.957167372976 7.83482537611659 7.33230531166001 7.40201457723054 7.29875266742708 6.31315068183317 7.66527996065513 8.00111414487862 7.81558414564616 8.11481621553269 8.46256016846332 7.68369180526545 8.31396126094513 7.5853797146433 6.51344363225058 0.217551900613725 0.212265663917963 0.211553728785230 0.201825212665210 0.208955979868059 0.223003498652277 0.203322043753231 0.203732337590522 0.214194417586982 0.223706399133692 0.205411279606369 0.207175574039498 0.204393915162863 0.218003493807806 0.207385639797503 0.203122494103801 0.205218877701097 0.208276903210847 0.223567956249970 5 5|0 -|/ 6589180 6589881 6589568.556 6588960 6591365 - gene protein_coding_gene TRUE TRUE AT5G19530.1|AT5G19530.2 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. similar to SPDS1 (SPERMIDINE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT1G23820.1); similar to spermine synthase [Arabis gemmifera] (GB:BAB83654.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) 0.739948770943061 8.92661713572982 2.99661142864243e-06 0.000104106294460246 13.0903944213827 14.8071500032906 0.739948770943061 0.0390389500021734 AT5G37300_at 7.60672391080693 8.07798499648239 10.0622569359181 10.1456270427657 10.9232547863184 10.1403434920454 10.9488627873720 10.6524681295676 10.1226891890592 10.2228024070230 11.7988449994352 11.6171296266337 11.6100838802387 11.6333213084627 11.1558071484313 11.1617889118355 10.7891916610470 11.4723572628156 9.91855541639185 0.180129714769738 0.152681409911514 0.140235678964348 0.136732682434239 0.135651811586442 0.135866292115587 0.132502462514893 0.135524479814020 0.142069610482979 0.133959411306279 0.137087330315163 0.136681554045277 0.135086226472223 0.135637077262083 0.136510272332679 0.132689225458604 0.145202729330095 0.132758034729046 0.137160869856657 5 5|0 +|/ 14786414 14787237 14786883 14784729 14787479 + gene protein_coding_gene TRUE TRUE AT5G37300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38995.1); similar to Protein of unknown function DUF1298 [Medicago truncatula] (GB:ABE82755.1); contains InterPro domain Protein of unknown function UPF0089; (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298; (InterPro:IPR009721) 1.15658026862124 8.91732084065823 3.02622071863268e-06 0.000105050785541969 13.0811656502715 20.5661058955031 1.15658026862124 0.166873290759224 AT5G17880_at 8.1041579683382 8.30250529697074 8.85644120584625 8.75424668436727 8.87731541620028 8.66654701866487 6.90360408303356 6.87454484498388 8.22951443476271 7.44367439748545 8.01299031681226 8.5719176631011 8.03057084280799 7.97903165460664 7.99709316422853 8.24778513323976 8.1381657439545 8.26687435363329 7.9360587609124 0.144905328467572 0.135723101825974 0.144031488035092 0.139896860846689 0.139731389951757 0.142342447219316 0.139322884808166 0.138714917059850 0.154255576164462 0.147940205072489 0.142199963988637 0.139239529189948 0.139378248388299 0.144536741682496 0.141487652385738 0.139917355538322 0.140788777617478 0.148435529335383 0.14332121270452 5 5 - 5908893 5909504 5909205.364 5908876 5913101 - gene protein_coding_gene TRUE TRUE AT5G17880.1 CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1); ATP binding / protein binding / transmembrane receptor Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) 0.764119472132949 8.90007468007188 3.0819936150193e-06 0.000106901269831714 13.0640192391434 16.1800717181847 0.764119472132949 0.0533539455615957 AT5G55260_at 6.06659894847282 6.06337221460816 6.99881779572893 6.98956417727545 7.54294720070467 6.83676731905288 7.02103183427232 6.46796093916603 5.94059506811835 6.1715306584621 7.54989411698005 7.9410458858711 7.75616573552446 7.76459118914513 7.56725482455131 7.74995248379099 7.80810560081823 7.06399931539931 6.28224111279628 0.182549097382294 0.186654342668781 0.188519386131010 0.189016505863413 0.192661453417680 0.197451760512689 0.182549097382294 0.182549097382294 0.2000801017808 0.192952692752969 0.182604744607791 0.185832556103156 0.184168466697132 0.191842104464454 0.189036486465532 0.184424947203563 0.184153461689575 0.186408878013473 0.189410089637948 5 5|0 +|/ 22434839 22435822 22435449.5 22433825 22436090 + gene protein_coding_gene TRUE TRUE AT5G55260.1 PPX2 (protein phosphatase x-2); protein serine/threonine phosphatase Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase. Identical to Serine/threonine-protein phosphatase PP-X isozyme 2 (EC 3.1.3.16) (PPX2) [Arabidopsis Thaliana] (GB:P48528;GB:O22626); similar to PPX1 (protein phosphatase x-1), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G26720.1); similar to Os09g0284200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062774.1); similar to protein phosphatase 4 catalytic subunit [Dictyostelium discoideum AX4] (GB:XP_645186.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 1.10297683497257 8.88655504562978 3.12649369856227e-06 0.000108358102264146 13.0505545720936 13.6391734322280 1.10297683497257 0.155236253396933 AT5G47400_at 2.00466938677249 2.12813810132664 3.00503568661571 3.05967661857022 2.84627542864357 2.62933447166248 2.03328275621937 2.0465043977697 0.71391017995346 1.65736669762148 2.15900682965309 1.69863139721929 1.76917971021827 2.12438949226757 1.67101201061463 2.14180401799347 2.03587399751292 1.96130896843451 1.49010778702517 0.209758403157118 0.209922720246174 0.207085362287270 0.211435608572998 0.211806680506548 0.235512536821779 0.212572417222519 0.209367243504885 0.212328914696798 0.215205992565524 0.222256613476342 0.213574862631368 0.212284425666316 0.212712285105919 0.217733297411671 0.206710055338708 0.220661757646693 0.216475021517702 0.206710055338708 5 5 + 19247788 19248704 19248140.091 19246389 19248749 + gene protein_coding_gene TRUE TRUE AT5G47400.1 similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1) 0.744977236153396 8.88124372018467 3.14416600488729e-06 0.000108867941016919 13.0452592468454 4.08525411820881 0.744977236153396 0.0442791209999325 AT5G06930_at 1.43557922836741 1.39970902111999 2.28778332755776 2.49026059989425 2.12505523382075 2.44826969926219 1.62930982930001 1.46865409618987 2.20531386859200 1.15836741177710 2.58856866963416 2.63911811951804 2.03957545511079 2.19865298439846 2.80450869398097 2.30719341898785 3.53459617373191 2.15704070734247 1.96153031241821 0.227077051848865 0.217903496557165 0.2232777666617 0.215489301223428 0.215695506010649 0.217962917286832 0.219186890369853 0.215120406129540 0.224279920682965 0.218746377790123 0.216974172861390 0.213573292760382 0.224043284941833 0.218131307101461 0.213573292760382 0.215703083817785 0.219092098501286 0.224739177112977 0.225653205712788 5 5|0 +|/ 2147158 2147779 2147502.889 2145000 2148040 + gene protein_coding_gene TRUE TRUE AT5G06930.1 similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.2); similar to hypothetical protein [Nicotiana tabacum] (GB:BAC53933.1) 0.806557709149197 8.88062665558864 3.14622616122088e-06 0.000108867941016919 13.0446438363473 4.06494128382262 0.806557709149197 0.0718878265289623 AT5G56740_at 5.02050971858664 5.26769675143107 5.72367648366195 5.71882411278547 5.62197856827352 5.63960855029724 5.44594634621361 5.68474165971693 4.00057056873639 3.93657793567014 5.4766407692428 5.7212551720187 5.55328566810144 5.5945575843831 5.47812625795845 5.47896738579177 5.21038681740045 4.95713082882197 4.67585640231052 0.210228104093821 0.206246932194908 0.214748784282448 0.20870372558729 0.215535688608678 0.215306901743361 0.215423105917522 0.209988337890248 0.229382474073768 0.212873174673701 0.211966448438806 0.213789270128702 0.206246932194908 0.206246932194908 0.216352582181966 0.215077037135998 0.218035178583835 0.212125477431663 0.222441539936669 5 5 - 22970394 22970749 22970596.909 22970022 22972890 - gene protein_coding_gene TRUE TRUE AT5G56740.1 histone acetyltransferase family protein Identical to Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) (HAG2) [Arabidopsis Thaliana] (GB:Q9FJT8;GB:Q8LKJ6); similar to histone acetyl transferase [Zea mays] (GB:AAM28228.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.775378575663315 8.87313013715624 3.17137145184428e-06 0.000109650525737194 13.0371640060581 10.3344371635561 0.775378575663315 0.0595617330389347 AT5G61140_at 7.47309672786233 7.37203189125081 8.25697690271275 8.37330954639687 8.8264972991246 8.32127291188478 7.44927003920784 7.38849405594868 7.44867064307968 7.35660607887673 8.2563953452375 8.0400562288957 8.31383457575198 8.06693067150645 8.31099290283526 8.25859307575418 7.80591963044535 8.14031805288873 7.52693956564269 0.177869064782130 0.178597384036088 0.187532908706889 0.173634010685842 0.173158668653064 0.193633924984163 0.182440068653712 0.180383477475782 0.193672071389287 0.185880864000077 0.176557574258297 0.184397951283164 0.18061175861336 0.194812081262069 0.182280375687009 0.176121574854046 0.203508249250194 0.178862730003237 0.178174015702337 5 5|0 +|/ 24619572 24620520 24620021.111 24607225 24620740 + gene protein_coding_gene TRUE TRUE AT5G61140.1 DEAD box RNA helicase, putative Encodes a predicted protein with 30% identity with MER3/RCK. similar to U5 small nuclear ribonucleoprotein helicase, putative [Arabidopsis thaliana] (TAIR:AT2G42270.1); similar to EMB1507 (EMBRYO DEFECTIVE 1507), ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT1G20960.1); similar to PREDICTED: similar to activating signal cointegrator 1 complex subunit 3 isoform a [Rattus norve (GB:XP_001062104.1); similar to PREDICTED: similar to Activating signal cointegrator 1 complex subunit 3 (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) isoform 2 [Canis familiaris] (GB:XP_854167.1); similar to PREDICTED: similar to Activating signal cointegrator 1 complex subunit 3 (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) [Gallus gallus] (GB:XP_419816.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Sec63; (InterPro:IPR004179) 0.864424475505184 8.87089958262503 3.17889527320891e-06 0.000109823084492405 13.0349372011401 15.7292197499390 0.864424475505184 0.0920111950852696 AT5G65440_at 6.32478410031399 6.64282502703199 6.34873362306647 6.16982991744848 6.87678931324572 6.46472341015266 5.14694362835209 5.43424988901459 6.6437769544326 6.0510463947564 8.46237909924934 8.36329137029675 6.75080227892342 7.77332961297402 8.52415034427494 7.67528017439837 6.3682096058736 7.78317301573678 6.68216421813784 0.216640604629327 0.209474901954271 0.207696783399588 0.2050265803079 0.201865296732279 0.201865296732279 0.20521968363237 0.207085466893494 0.205273292765277 0.220014656477925 0.211195037712289 0.208011153556450 0.207758844946615 0.206216709832212 0.204013957536873 0.206537303215364 0.201865296732279 0.201956658881492 0.212043145336491 5 5|0 +|/ 26173257 26174056 26173622.3 26168668 26174325 + gene protein_coding_gene TRUE TRUE AT5G65440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48310.1); similar to Os02g0760200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048187.1); similar to Os02g0198400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046207.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19403.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.915699743370229 8.86922351661512 3.1845614860689e-06 0.000109931243721237 13.0332635855226 13.261896260324 0.915699743370229 0.107447265079800 AT5G22330_at 5.82022022332828 5.97443436866405 6.95743859615946 7.39386093925413 7.98776608422816 7.23428346782627 6.35221783154913 5.94484788248875 5.35056446154704 5.34465801759701 5.94594125042832 6.31827158889062 6.60894276249577 6.19479605062477 6.2009490418696 6.52353881328792 6.3131169744164 6.60342921548336 5.49701674520564 0.246416582118987 0.243167199335449 0.239289648422871 0.245132644058484 0.232761515733736 0.252719318951348 0.233496216786566 0.234161770623164 0.238164641454589 0.232936318277984 0.233174405226049 0.228686316907583 0.238506117780828 0.234236779381078 0.228686316907583 0.228686316907583 0.249000212880429 0.235116062991984 0.228686316907583 5 5|0 -|/ 7391237 7392103 7391696.889 7390799 7394197 - gene protein_coding_gene TRUE TRUE AT5G22330.1 ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); ATP binding / DNA helicase/ nucleoside-triphosphatase/ nucleotide binding similar to DNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G67630.1); similar to putative RuvB-like protein 1,49-kDa TATA box-binding protein-interacting protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83028.1); similar to putative Ruv DNA-helicase [Cicer arietinum] (GB:CAB76908.1); similar to Ruvbl1 protein [Xenopus laevis] (GB:AAH71105.1); contains InterPro domain Molybdopterin cofactor biosynthesis MoaC region; (InterPro:IPR002820); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.15580866638166 8.85759937969942 3.22416106776599e-06 0.000111168504666162 13.0216477689477 12.5761518176724 1.15580866638166 0.168489205245057 AT5G55190_at 9.4806584695214 9.74519602359949 10.2539752007448 10.2580584680460 10.2842016176611 10.4230433459863 9.4882741551674 9.70278926527115 8.9358751265458 9.42968623261129 10.3403714422489 10.3010743681184 10.1613438700715 10.1555294536090 10.1621697036366 10.2670173804523 9.53145126518326 10.1092312328357 9.42027361529083 0.0965395282910708 0.091589160876248 0.0948829417085674 0.0923178550032697 0.0929186056829334 0.0937438793467219 0.0966973384348048 0.0959527139973278 0.121905204347559 0.0992671538666228 0.0917280521059258 0.0905007082670276 0.0936716464434896 0.0940454734921787 0.0938901069524507 0.090683993485625 0.104938147264973 0.0980296317436709 0.0921004642991934 5 5 + 22410194 22411158 22410831.182 22409402 22411398 + gene protein_coding_gene TRUE TRUE AT5G55190.1 RAN3; GTP binding A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. Identical to GTP-binding nuclear protein Ran-3 (RAN3) [Arabidopsis Thaliana] (GB:Q8H156;GB:O04148;GB:O04664;GB:O22495); similar to RAN2 (Ras-related GTP-binding nuclear protein 2), GTP binding [Arabidopsis thaliana] (TAIR:AT5G20020.1); similar to GTP-binding protein [Helianthus annuus] (GB:AAM12880.1); contains InterPro domain GTP-binding nuclear protein Ran; (InterPro:IPR002041); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.78358438887823 8.8571999267857 3.22553131588830e-06 0.000111168504666162 13.0212483323288 19.6497588587507 0.78358438887823 0.0636527302993406 AT5G27650_at 5.62184930600577 5.9866902301418 6.91127481209733 6.79829801257318 7.21725902316615 6.97703652502111 6.05026304043888 5.96923650282137 5.66628741317048 6.36764367191827 6.76416093402657 6.9878157311404 6.95549193878046 6.69102207589821 6.37307881919814 6.99756699676259 6.6861596047793 6.73691445089165 6.54596203212462 0.225304591850800 0.224617944093207 0.222940925430926 0.219567148290697 0.223436009237574 0.227551685447475 0.228482071898311 0.225324798693607 0.244215724172526 0.218441121097616 0.219780700110923 0.220678178022880 0.224271996893870 0.225257233325239 0.233743809502518 0.223999343711027 0.241621136087948 0.231333293490364 0.228374109797206 5 5 + 9788539 9789065 9788816.364 9785410 9789235 + gene protein_coding_gene TRUE TRUE AT5G27650.1 PWWP domain-containing protein similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G05430.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAV24808.1); contains InterPro domain PWWP; (InterPro:IPR000313) 0.824842968279685 8.85640417932252 3.22826285808540e-06 0.000111174273922234 13.0204525639044 12.9251504438694 0.824842968279685 0.0793309468309658 AT5G02150_at 7.79382379889803 7.78411816551479 8.43191357072084 8.17704911745112 9.10312887279207 8.49687673062962 6.85888645188721 6.74201579560055 7.32896271871877 6.10977809213459 7.9644016588891 7.5805843305464 7.58906025581864 7.6202389881836 7.47082810994387 7.55458231793799 6.77027776299929 7.08699100294614 7.04056198888252 0.202555442296092 0.198953656675532 0.210803287489031 0.200232856440863 0.206046213252250 0.205048253824784 0.198698963864667 0.204459652449287 0.213917516968742 0.207144798521124 0.202591815770121 0.206845447929561 0.204954485650703 0.210076647424593 0.202758393771699 0.202381734346292 0.233035669440767 0.20221427679107 0.198590079679287 5 5|0 -|/ 424488 425221 424817.3 424288 426076 - gene protein_coding_gene TRUE TRUE AT5G02150.1|AT5G02150.2 binding similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G09350.1); similar to Os03g0271400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049691.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19270.1); similar to Os03g0822700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051736.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989)|similar to binding [Arabidopsis thaliana] (TAIR:AT3G09350.2); similar to Os03g0271400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049691.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19270.1); similar to Os03g0822700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051736.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.942858653376386 8.85118338748354 3.24624639766123e-06 0.000111704862410215 13.0152298696817 15.0640039729302 0.942858653376386 0.1156039478462 AT5G13160_at 7.62639506008373 7.57676072252665 8.4430193172661 8.41021315707484 8.23711011472652 8.4950894505645 7.5975196158998 7.72464839971047 7.56287008741599 7.68572995757723 7.98309793278543 8.13043226361272 8.27210784928512 8.35485415377787 7.93752814082742 8.55064026074356 8.36695570056691 8.52335074448445 7.31629357203065 0.160085354145520 0.151896598971277 0.153601815097038 0.159531365820666 0.150718997192648 0.164501253749215 0.160560606292581 0.150330798026384 0.171304382681704 0.16116560247045 0.162710950390539 0.149093623850682 0.153146172823144 0.152265594046983 0.157625276977922 0.155899470721990 0.157870868861212 0.149612945261918 0.168934551822973 5 5|0 +|/ 4179079 4179646 4179378.2 4176582 4179888 + gene protein_coding_gene TRUE TRUE AT5G13160.1 PBS1 (AVRPPHB SUSCEPTIBLE 1); kinase Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. Identical to Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) (PBS1) [Arabidopsis Thaliana] (GB:Q9FE20); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to Os02g0513000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046943.1); similar to Os04g0393900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052650.1); similar to putative protein serine/threonine kinase [Triticum aestivum] (GB:AAY26388.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.754133367719317 8.84371961505608 3.27214480949798e-06 0.000112474011851379 13.0077580550467 15.9070955229491 0.754133367719317 0.0508247367785006 AT5G28220_at 4.11530422325101 3.95737809681195 5.27454053793299 5.18532926991725 5.27067416153612 4.95569549537832 3.8362404290057 2.78096423546055 2.46524344621907 2.24075206959424 3.57795749926534 3.84774607576149 3.30981121368576 3.67520324068825 3.66167358627716 3.50906936760766 3.09369794391703 3.37574566135804 2.73223229862633 0.254054198534328 0.249251011254819 0.245810485060927 0.245810485060927 0.247654450489801 0.250858811404027 0.249557629374205 0.253317794848027 0.273963311969037 0.246317054144690 0.252111270636506 0.246056368718069 0.250556608913973 0.249980051223236 0.249406315026261 0.245810485060927 0.264331804620859 0.246394905503625 0.247648668153024 5 0|5 /|- 10190643 10191445 10191061.125 10190361 10193123 - gene protein_coding_gene TRUE TRUE AT5G28220.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G04830.1); similar to O-linked GlcNAc transferase like [Nicotiana tabacum] (GB:CAC12882.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.26302096107454 8.84324854954305 3.27378684202491e-06 0.000112474011851379 13.0072862717035 7.41490197868672 1.26302096107454 0.193149373059732 AT5G36880_at 8.5895275873008 8.69149071060363 9.23007460998572 9.1280537691574 9.37315619748696 8.96507053928135 8.47022199706327 8.41276556960482 7.95799762370125 8.07180052303842 8.97049327079307 9.13958514355182 8.71606414190317 9.0261821200412 9.01867337558223 8.78137801989987 8.7010863402486 9.06963359896634 7.77885066441434 0.129552744356883 0.130370628190361 0.128601728062449 0.130538402479340 0.134111552412677 0.131843344362581 0.126181426178109 0.135326627503771 0.144512382900310 0.137776615312957 0.125786432945109 0.123602494226402 0.125161761064318 0.123773442188216 0.128771799077252 0.124042696289117 0.132156567104154 0.136339193252654 0.130058886674144 5 5|0 -|/ 14552196 14553362 14552675.7 14551843 14557529 - gene protein_coding_gene TRUE TRUE AT5G36880.1|AT5G36880.2 acetyl-CoA synthetase, putative / acetate-CoA ligase, putative|AMP binding / acetate-CoA ligase/ catalytic similar to acyl-activating enzyme 17 (AAE17) [Arabidopsis thaliana] (TAIR:AT5G23050.1); similar to Acyl-CoA synthetase (ISS) [Ostreococcus tauri] (GB:CAL52318.1); similar to acetyl-CoA synthetase [Solanum tuberosum] (GB:CAA67130.1); similar to H0502B11.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66525.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873); contains InterPro domain Acetate--CoA ligase; (InterPro:IPR011904) 0.812379021911672 8.8357729501924 3.29996497582273e-06 0.000113283620994425 12.9997959367918 17.2895967584395 0.812379021911672 0.0755596924211902 AT5G10430_at 2.45537214225369 3.00820774693931 2.00399035614798 2.06146980255875 2.47740277346526 2.42029564811574 1.84570765997006 2.29523916293406 2.60382704132966 2.60453638144033 5.00086761744531 5.63526235500278 5.27706904945922 4.82822391895085 4.89337033440277 4.65647283985591 4.31624225103442 3.94826771580337 2.93393330665471 0.246419181403487 0.245892982724204 0.254417049559406 0.244274727735456 0.247784149760389 0.244274727735456 0.253029643424915 0.244274727735456 0.260958898041146 0.248811369247711 0.248101587024203 0.254735799489160 0.249742199819418 0.247901887173804 0.247461840946160 0.244274727735456 0.244474286610600 0.263587604320755 0.244274727735456 5 5 - 3277832 3278209 3278012.091 3277533 3278314 - gene protein_coding_gene TRUE TRUE AT5G10430.1 AGP4 (ARABINOGALACTAN-PROTEIN 4) Encodes arabinogalactan-protein (AGP4). Identical to Classical arabinogalactan protein 4 precursor (AGP4) [Arabidopsis Thaliana] (GB:Q9ZT16); similar to AGP7 (Arabinogalactan protein 7) [Arabidopsis thaliana] (TAIR:AT5G65390.1); similar to 4D11_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67543.1); contains InterPro domain Glutelin; (InterPro:IPR000480) 0.97251553374187 8.83472118434127 3.30366621649356e-06 0.000113320956262988 12.9987415927039 6.08774612157439 0.97251553374187 0.124102142256320 AT5G22580_at 9.8369345798939 9.89023772883276 8.24815365892488 8.2289101609208 8.609689288217 8.04898829540157 8.59111650876158 8.73439910064745 7.21731705717341 8.86533334309854 11.8899512050759 12.4667920579 11.5950397818981 11.6786281291952 11.7611660568736 11.7772371023248 10.0218300681869 11.9934364579714 10.5909192712132 0.128763372909405 0.133321300913186 0.134786977818621 0.132196070590619 0.135773333394408 0.151693367343113 0.134624589458714 0.133077376809927 0.158711586144634 0.138123310030021 0.134719407528613 0.134602168152095 0.135011680812507 0.142886212690609 0.134594622176432 0.134607119640917 0.146428436689296 0.137216874802838 0.132750367843584 5 5 + 7502724 7503116 7502979.364 7502677 7503452 + gene protein_coding_gene TRUE TRUE AT5G22580.1 Identical to Protein At5g22580 [Arabidopsis Thaliana] (GB:Q9FK81); similar to stable protein 1-related [Arabidopsis thaliana] (TAIR:AT3G17210.1); similar to hypothetical protein [Cucumis melo] (GB:BAD93607.1); contains InterPro domain Stress responsive alpha-beta barrel; (InterPro:IPR013097); contains InterPro domain Dimeric alpha-beta barrel; (InterPro:IPR011008) 0.888791794132664 8.83370307063287 3.30725331568902e-06 0.000113354320366065 12.9977208645335 19.0431536641616 0.888791794132664 0.100629024083818 AT5G41670_at 7.450721586513 7.78285704243362 7.93474667245535 7.93572002095363 8.15520564864366 7.97250367116957 8.29142539297803 8.24718931051478 6.2153240724201 7.0732400055199 8.39712644753473 8.75010367615862 8.13317231821442 8.17295489415551 8.31623456245048 8.0948307168487 7.72201837508299 8.19307314597538 6.82494155692204 0.159633696333615 0.157454121461013 0.166858038821316 0.159832732585703 0.156998577931659 0.156803300133745 0.160555759376569 0.158863626075323 0.194385668202142 0.166829505941857 0.158932835868132 0.164278896090213 0.162230680015403 0.156344484012695 0.156812241572739 0.1601382293807 0.158103237024091 0.155786612389116 0.169509423142128 5 5 - 16682903 16683373 16683127.364 16682511 16684399 - gene protein_coding_gene TRUE TRUE AT5G41670.1|AT5G41670.2 6-phosphogluconate dehydrogenase family protein similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G64190.1); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT3G02360.1); similar to cytosolic 6-phosphogluconate dehydrogenase [Spinacia oleracea] (GB:AAK51690.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96861.1); similar to plastidic 6-phosphogluconate dehydrogenase [Spinacia oleracea] (GB:AAK49897.1); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD-binding; (InterPro:IPR006115); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal; (InterPro:IPR006114); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal extension; (InterPro:IPR012284); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, decarboxylating; (InterPro:IPR006113); contains InterPro domain 6-phosphogluconate dehydrogenase; (InterPro:IPR006183); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal core; (InterPro:IPR012283) 0.787216529480476 8.83231339371903 3.31215634592329e-06 0.000113432698960304 12.9963274304757 15.4347667408777 0.787216529480476 0.0660451855383372 AT5G02770_at 8.33206334422811 7.5580941769091 9.34402494054907 8.9878628918211 9.7913864169072 9.03652145878 8.65302917392718 7.54990643458654 6.51711130232704 5.86188954825917 8.34128651719648 8.16938127313192 8.76224811958103 8.3779772318989 8.02433291359495 8.5829497130894 8.85363632397755 7.7181460626533 6.60886403441462 0.178803065248434 0.183116319391581 0.182956013183778 0.178893345703762 0.178901934658940 0.178794838458272 0.179122839275873 0.191032444136539 0.222616612363888 0.198524576652681 0.176833132335706 0.176611109403747 0.178857367206538 0.177977013163200 0.181772429915724 0.17929864648198 0.176611109403747 0.195636979132717 0.200324923556100 5 5|0 -|/ 628099 629097 628705 627032 629253 - gene protein_coding_gene TRUE TRUE AT5G02770.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95330.1); similar to Os03g0283300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049753.1); contains domain FAMILY NOT NAMED (PTHR21594); contains domain gb def: Hypothetical protein Y53G8AR.6 (PTHR21594:SF7) 1.64556605949589 8.82860930128646 3.32526354821337e-06 0.000113791703522598 12.9926122602674 15.9981276369089 1.64556605949589 0.274311051961762 AT5G17850_at 4.24402516417509 5.34590369175069 5.65492911594242 6.0293491722931 6.19918622218887 5.98713920713381 2.73359630455414 2.589777848376 2.96371812055618 2.78211939332738 2.81958786286664 3.01366763687560 2.70184730908558 3.28193582392376 2.9683800465331 3.94266907846404 3.29861710681966 3.1506337515779 2.49891365991517 0.293564303338972 0.289745563563142 0.299623472466758 0.293488829604356 0.290734276615837 0.295367761102055 0.287841857748556 0.279812471773369 0.278351068885735 0.28586065858958 0.274673894728173 0.278975920816139 0.279464276826081 0.281551588870385 0.291928402120337 0.276654117993544 0.278965278920552 0.278047473327512 0.273650836297173 5 5 + 5900367 5900878 5900648.182 5899255 5900934 + gene protein_coding_gene TRUE TRUE AT5G17850.1 cation exchanger, putative (CAX8) similar to cation exchanger, putative (CAX7) [Arabidopsis thaliana] (TAIR:AT5G17860.1); similar to Sodium/calcium exchanger membrane re (GB:ABE92415.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) 1.31912105646381 8.81939872272338 3.35810000399169e-06 0.000114824751469761 12.9833674276713 7.79569719994403 1.31912105646381 0.206216569640454 AT5G10020_at 3.42993457346955 3.33810368767241 3.08533557045438 3.57113595468288 3.55034434718160 3.45302390495201 3.34743830559327 3.30282619712087 3.31744023020506 3.09562190219827 5.81428472466554 5.91320503944403 4.57700194339441 4.74347393434291 5.56729733261419 4.69149748954703 3.69579465096055 3.99206979548046 3.3184094213815 0.255665895866409 0.251473881124502 0.251473881124502 0.252980774349081 0.251473881124502 0.262435871774656 0.2580716823918 0.253777131969949 0.258967036987764 0.258897706587473 0.259071718704333 0.27656743996544 0.253111136831943 0.259083429294822 0.268460902308567 0.251866604151300 0.258578793949206 0.259217028177132 0.259122486018766 5 0|5 /|+ 3136374 3136924 3136604 3133262 3137243 + gene protein_coding_gene TRUE TRUE AT5G10020.1|AT5G10020.2 leucine-rich repeat transmembrane protein kinase, putative similar to ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G27060.1); similar to 52O08_19 [Brassica rapa subsp. pekinensis] (GB:AAZ67565.1); similar to 117M18_5 [Brassica rapa] (GB:AAZ66924.1); similar to 80A08_1 [Brassica rapa subsp. pekinensis] (GB:AAZ67586.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.84544425794911 8.81813121406266 3.36264619456645e-06 0.000114889594104717 12.9820944557323 7.44384380017475 0.84544425794911 0.0875417904133731 AT5G67580_at 6.52829286099257 6.31236511240034 7.10365042099715 7.45871487033695 7.70955505583357 7.45089437711207 6.84135151111234 6.24831591165265 6.27108601926019 6.2227779603041 7.54795842034247 7.57240507334265 7.31921605096553 7.4112786545158 7.35389955973418 7.70117999762163 6.82745873867963 7.32185618215573 6.47306884805126 0.197789650667818 0.193065749105973 0.196895723034168 0.190177791511971 0.196737782212826 0.197552878340158 0.201960490228389 0.195298654272079 0.218616460735627 0.194025796225482 0.194023830734615 0.195166982217580 0.191526581907977 0.20403446871588 0.197204650752873 0.193220813400663 0.210089405848785 0.198562512695749 0.198113620933166 5 5 - 26973077 26973889 26973498 26972361 26974969 - gene protein_coding_gene TRUE TRUE AT5G67580.1|AT5G67580.2 ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor similar to ATTRB3/TRB3 (TELOMERE REPEAT BINDING FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G49850.1); similar to MYBR6 [Malus x domestica] (GB:AAZ20445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.00385898708082 8.80803697465487 3.39909015015357e-06 0.000116037278076627 12.9719502301617 13.8087512786588 1.00385898708082 0.133071286449698 AT5G40610_at 3.82774337901313 3.48820560666518 3.50781992522663 3.26811763585324 4.7555108168738 4.06182521393827 3.77799562246476 3.32974285780843 4.05017211803765 3.98181290824674 5.92901767045662 7.4705223204887 5.55269596010375 6.10859603656197 6.67049355577258 6.03495228614472 4.21752611281884 5.79969311227349 4.0855751561842 0.222210344443081 0.225543988323674 0.224147528120488 0.223665369482145 0.218894894287674 0.226352097552365 0.220557849513044 0.225552722285235 0.234674265113137 0.231376454848441 0.218894894287674 0.222058838065622 0.221472815589344 0.230468027731301 0.219131893973439 0.221967735149607 0.227739318477796 0.219148921649233 0.222133873975500 5 5|0 -|/ 16282306 16283306 16282716.9 16282090 16284582 - gene protein_coding_gene TRUE TRUE AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH similar to GLY1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1), glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G40690.1); similar to Glycerol-3-phosphate dehydrogenase [NAD+] (GB:P52425); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase; (InterPro:IPR006168); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; (InterPro:IPR011128); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; (InterPro:IPR006109) 1.11307346791158 8.80691758276006 3.40315784372906e-06 0.000116037278076627 12.9708245857591 8.75818206188899 1.11307346791158 0.160005236290660 AT5G16830_at 8.50721678662476 8.7165134687456 9.65874911273532 9.7099438567415 9.85212188620177 9.83995940071067 8.88782333608882 9.26616423722413 8.75347513004793 8.6955928693774 9.5738614993071 9.27988818105144 9.6377137498304 9.43290317988048 9.22711464956402 9.6050256358813 9.49174588130381 9.30753767720518 8.79146516617251 0.133687772200414 0.129285933008541 0.132172610665749 0.132804084005370 0.132571201563870 0.132918479992217 0.135731140130342 0.132633919469227 0.152465541915960 0.150358817541267 0.135789473334348 0.131922002799791 0.129384192200804 0.130972549402223 0.131169100948537 0.128632727890284 0.133498530206371 0.146905247645844 0.138881863539313 5 5|0 -|/ 5533090 5534504 5533603.7 5532849 5535255 - gene protein_coding_gene TRUE TRUE AT5G16830.1 SYP21 (syntaxin 21); t-SNARE member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane. Identical to Syntaxin-21 (AtSYP21) (PEP12 homolog) (AtPEP12) (aPEP12) (SYP21) [Arabidopsis Thaliana] (GB:Q39233); similar to VAM3 (syntaxin 22), t-SNARE [Arabidopsis thaliana] (TAIR:AT5G46860.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 0.809196762573423 8.80661284826294 3.40426611350523e-06 0.000116037278076627 12.9705181245918 18.4004706082769 0.809196762573423 0.0753763355773632 AT5G60210_at 4.19420717665005 4.48718101329061 3.9970934782358 4.54094153267511 5.59619854097264 5.4163940495376 4.24477015603527 3.70012502304216 4.26982655720883 4.42740379581153 5.2001866195972 6.44306989851275 5.9517794451996 5.4992226582076 5.7627962664082 5.86565390137377 5.25105625111725 5.87780886468442 4.36782770822098 0.209163721632771 0.209163721632771 0.224775479695726 0.216707445307353 0.210324468351024 0.244044720513249 0.220131371104361 0.216971947623236 0.235284297150961 0.212240337023695 0.221849674667584 0.209163721632771 0.212112388360159 0.211282470701617 0.210400074518642 0.209163721632771 0.217543672381313 0.216289377373794 0.221430883230828 5 5 - 24260587 24261138 24260915.222 24260309 24262858 - gene protein_coding_gene TRUE TRUE AT5G60210.1 cytoplasmic linker protein-related similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G37080.1); similar to Putative myosin heavy chain-like protein, related [Medicago truncatula] (GB:ABE85909.1) 1.05375672124563 8.79972557439706 3.42941853849275e-06 0.000116802793574000 12.9635890248871 9.56534691724726 1.05375672124563 0.145877213993713 AT5G24170_at 5.46326523863751 5.6422128029699 7.37100510139315 7.35033263446131 7.86986096927478 6.43472949679184 6.36636828158701 6.5567511940193 5.15150683740869 5.81354704538807 7.54104153451086 7.33878254678911 7.75518487346084 7.47010320571665 7.0613709637252 7.24225382767593 6.9440519305869 7.56728874267657 5.67702535557561 0.265992189714877 0.258017684221775 0.273469907881394 0.257488870752957 0.261829107446786 0.278373437831512 0.258726769446732 0.258196010147985 0.264587908310847 0.257488870752957 0.263599227096432 0.257488870752957 0.261332306259752 0.279008056144711 0.263399260989255 0.257488870752957 0.275082862506682 0.267566813996083 0.26683627254363 5 5|0 -|/ 8189961 8191265 8190556.556 8189486 8191394 - gene protein_coding_gene TRUE TRUE AT5G24170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23550.1); similar to Os01g0219100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042417.1); similar to Os02g0564500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047161.1); similar to hypothetical protein, conserved [Leishmania major] (GB:CAJ02001.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 1.53349131409774 8.79653295437068 3.44114623917558e-06 0.000117110232640316 12.9603751953933 13.0880004395253 1.53349131409774 0.252464014302236 AT5G66380_at 6.58928964250398 6.75486923979937 7.59533899974161 7.04995776117381 7.67655452889154 7.59405555883595 5.55221997757744 5.78055591135563 5.39339902832625 5.77597764458852 6.20591579887777 5.97330952520256 6.1989866306535 6.39326810788248 6.44053214544784 6.55964937717711 5.6890341360912 6.23847332112646 5.95414792291139 0.241511592554911 0.225288746712963 0.241590854341945 0.243860119904786 0.23775265601256 0.241663576192244 0.225071647059677 0.227276729879151 0.232050569708550 0.225342164080335 0.225288816431655 0.226080981074413 0.231788217443143 0.226584475527172 0.226512244773827 0.226827678879577 0.239613975038623 0.226642466631910 0.232028204464771 5 0|5 /|- 26530918 26531934 26531411 26530750 26532921 - gene protein_coding_gene TRUE TRUE AT5G66380.1 ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1); binding / folic acid transporter Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G47490.1); similar to hypothetical protein [Thellun (GB:ABB45839.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.907148808858468 8.7943402549596 3.4492260078754e-06 0.000117198332396687 12.9581672607410 12.7842240336096 0.907148808858468 0.107210217309285 AT5G10730_at 5.8667199970526 6.41930549469406 7.33562637265617 7.3034211621467 6.70588523089274 6.60433340209598 6.67215368200262 6.83153522016634 5.13927167324704 6.06361749148725 6.46520962616607 6.88758003721106 6.95782341459086 6.76313296972273 6.81883879764835 6.90259927956459 7.02530903853342 7.04091822531592 5.66910372503132 0.201002546997018 0.197669123472923 0.19859593218442 0.201708320996005 0.199286502169019 0.202170221629982 0.200061578381402 0.200436855614343 0.230695974508386 0.205804760363265 0.196819189370120 0.19788388389263 0.200293693198062 0.204043612553549 0.208139699369322 0.196015241812513 0.211397421959982 0.196015241812513 0.204042376240001 5 5|0 -|/ 3390862 3392134 3391246.7 3390615 3393179 - gene protein_coding_gene TRUE TRUE AT5G10730.1 catalytic/ coenzyme binding similar to dehydrogenase-related [Arabidopsis thaliana] (TAIR:AT5G15910.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96868.1); similar to Os02g0556100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047127.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.886783368570628 8.79420985589326 3.44970715567919e-06 0.000117198332396687 12.9580359384859 12.9582095969714 0.886783368570628 0.101218954845818 AT5G15860_at 7.24890276155032 7.31316437526413 8.62954600675039 8.89469450580027 8.3767251568202 7.81985080756659 5.13569199574534 4.69978617768409 5.96706815937204 4.61491964262573 4.03952676595984 3.69463782452592 4.83546244242009 4.45438355712893 3.7972212090801 5.75461002507032 6.13886130129633 5.07437058677786 4.61208487578658 0.275494132558157 0.276968598590679 0.291778853581623 0.281795200819071 0.280313494851984 0.29186534538152 0.270129783039518 0.273734709699353 0.273531499297392 0.270129783039518 0.283704655114211 0.274518653676091 0.270129783039518 0.280874237559103 0.270129783039518 0.270129783039518 0.280732481908516 0.271798981253551 0.276204399962659 5 5|0 -|/ 5178720 5179574 5179217.3 5178508 5181386 - gene protein_coding_gene TRUE TRUE AT5G15860.1|AT5G15860.2 ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase|ATPCME (PRENYLCYSTEINE METHYLESTERASE) Encodes a protein with prenylcysteine methylesterase activity. similar to serine esterase [Arabidopsis thaliana] (TAIR:AT3G02410.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96862.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Carboxylesterase, type B; (InterPro:IPR002018) 0.994880556555518 8.79363091577214 3.45184421270736e-06 0.000117198332396687 12.9574528763730 12.1589577767113 0.994880556555518 0.131174545306358 AT5G43900_at 8.2944900890062 8.13729053718402 9.03727043789942 8.83521863546656 9.2876473892262 8.40675672653266 7.84100877996043 7.65782511504277 7.60389793003605 6.99209473918422 8.84921101510538 8.64157838963926 8.92259275293837 8.74040817818558 8.37551723551832 8.65552678546964 8.5280332426357 8.52360890790007 7.38060168341533 0.180538620322836 0.170215287964689 0.175098069372855 0.166738633137847 0.175747290589357 0.176135024454152 0.173075005662437 0.174749836272704 0.186903196858228 0.168397016688087 0.166016189616104 0.166531611363426 0.164867151664084 0.175720261584150 0.175719760252281 0.166609046796285 0.177257168422349 0.177354911731006 0.175668224371621 5 5|0 -|/ 17674752 17675813 17675223.143 17674144 17684053 - gene protein_coding_gene TRUE TRUE AT5G43900.1 MYA2 (ARABIDOPSIS MYOSIN) Encodes a member of the type XI myosin gene family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. similar to XIG (Myosin-like protein XIG), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT2G20290.1); similar to XIC (Myosin-like protein XIC), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT1G08730.1); similar to XIB (Myosin-like protein XIB) [Arabidopsis thaliana] (TAIR:AT1G04160.1); similar to myosin subfamily XI heavy chain [Petroselinum crispum] (GB:AAK21311.1); similar to unconventional myosin [Helianthus annuus] (GB:AAB71528.1); similar to IQ calmodulin-binding re (GB:ABE82655.1); contains InterPro domain Dilute; (InterPro:IPR002710); contains InterPro domain Myosin, N-terminal, SH3-like; (InterPro:IPR004009); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 1.11904888976418 8.79152283258975 3.45963795906934e-06 0.000117371037107895 12.9553294630154 16.4272339709411 1.11904888976418 0.161883480422464 AT5G66250_at 8.55553035955303 8.4698997026665 9.20875484842632 9.2266217555231 9.76278186273334 9.0569876896279 7.72383222693285 7.26980710149215 8.37756823276733 7.80506181102218 8.7127313331122 8.55219020959093 8.7864233237763 9.2019188875307 8.47882403401572 9.0351265410704 8.7769993776204 8.89699078812724 7.84319400255121 0.113828116253042 0.113003109137228 0.120329305421842 0.113844371690324 0.114315670916779 0.120181742963443 0.122482165545742 0.116429727457864 0.118852657372230 0.123624911247626 0.112488984080931 0.114068786662723 0.112235179771084 0.116585659481037 0.118834980225551 0.116564776432637 0.111265325057156 0.114998662644539 0.124009152780618 5 5|0 +|/ 26486646 26487578 26486949.3 26485759 26487782 + gene protein_coding_gene TRUE TRUE AT5G66250.1|AT5G66250.2|AT5G66250.3 kinectin-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17990.1); similar to putative calcium-dependent protein kinase CPK1 adapter protein 2 [Mesembryanthemum crystallinum] (GB:AAR06858.1) 1.05278086891256 8.7868473763393 3.47699156804329e-06 0.000117867544308794 12.9506182093666 17.0661562320206 1.05278086891256 0.146017128958496 AT5G17570_at 3.38295493536096 3.56534512752272 5.34401856279366 4.70561256511103 5.81945067914371 5.12057912561021 4.72091033368072 4.06983584922265 2.8289522497634 3.54448095147086 4.5735722829666 4.68656563140253 4.53644040845964 4.42317740188461 4.51734070163876 4.64574753055803 5.16857158750951 4.14106982179956 3.57784419577794 0.215408151317249 0.219355826309261 0.220420154065631 0.215931969015091 0.215300523530658 0.22254635222611 0.213507291077947 0.218660128030235 0.232537076095318 0.214840185222684 0.215256087631507 0.217391135829610 0.215292088784633 0.215315434774067 0.213677085373783 0.213507291077947 0.217278545135685 0.221620880278329 0.220689825671561 5 5 + 5793693 5794534 5794081.364 5792928 5794794 + gene protein_coding_gene TRUE TRUE AT5G17570.1 tatD-related deoxyribonuclease family protein similar to tatD-related deoxyribonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G03500.1); similar to Os04g0577500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053632.1); similar to H0404F02.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66729.1); contains InterPro domain TatD-related deoxyribonuclease; (InterPro:IPR001130) 1.29106093841228 8.78156384622107 3.49671565361019e-06 0.000118413113982746 12.9452912432029 8.54291496552978 1.29106093841228 0.201305634625853 AT5G51510_at 7.31513221174451 8.04964871291469 8.58956813691616 8.53000909689563 8.82795894570006 8.61524705362558 6.9635524991481 7.31662135106936 6.55853515866944 6.1939565793568 7.52113479274402 7.30357727190504 7.57631373267582 6.79464657407038 7.23036088811541 7.32157052432614 7.14492220827321 7.3329250865665 6.4553257799068 0.224482772850892 0.222533774217293 0.236082010720783 0.230550998683605 0.228521025225988 0.230385831841524 0.231983012726162 0.222533774217293 0.246013975619244 0.228343221459447 0.225535461431767 0.224818920145196 0.231204555073059 0.239583236726675 0.230670629584696 0.226898798452324 0.244557926755399 0.229096507319101 0.224405433449217 5 5 + 20938766 20940019 20939316.364 20938659 20940204 + gene protein_coding_gene TRUE TRUE AT5G51510.1 similar to Os10g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065024.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM94931.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54551.2) 1.05251633004437 8.7810747527394 3.49854761928105e-06 0.000118413113982746 12.9447979687411 14.8663608630746 1.05251633004437 0.146122682554986 AT5G12050_at 7.42246093646543 7.83985644518086 7.21570077062227 7.46871079968478 8.66690286755469 8.44552070524309 6.99734860661039 7.52434364314214 9.4344637598831 8.13266475055833 11.1197864330642 11.0842976721729 10.9944666583389 10.2602876294948 10.9354261577289 10.3232225707670 9.81478452883023 10.0713329634793 9.73499793490653 0.189449172253089 0.188532978342167 0.198985174778322 0.206226750576687 0.184036269311022 0.17750362159589 0.193493368879170 0.193523412325167 0.193637059366769 0.194971805656616 0.187516829458508 0.190031140417876 0.184926967111511 0.188156501706816 0.188581580365795 0.182272464603034 0.191824437832327 0.184661821406474 0.183879743807308 5 5 + 3890722 3891258 3890959 3890105 3891514 + gene protein_coding_gene TRUE TRUE AT5G12050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54200.1); similar to Os03g0175800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049135.1); similar to ATP-dependent DNA helicase, putative [Plasmodium falciparum 3D7] (GB:NP_702167.1) 0.988974069772524 8.7787330791598 3.50733308606058e-06 0.000118610985347457 12.9424359014463 17.5356852927382 0.988974069772524 0.130075294020148 AT5G19820_at 7.54268461338213 7.5777320967506 8.48644713546398 8.3723341200727 8.70885768221086 8.00349663387443 7.95774214605663 7.89375309049768 6.88067437112529 6.80763430621607 8.58856194268581 8.50649761889164 8.42720616396344 8.13354258644518 8.41534168750981 8.28770687375403 8.12633851387092 8.04361812809211 7.40739086278126 0.16237808163853 0.152706371185013 0.156209150612667 0.154810005333305 0.156357805888230 0.158080836405272 0.161156615609290 0.156646917780249 0.181885497806056 0.169855597193723 0.157895266959395 0.162981567675559 0.156970015688949 0.168065493993756 0.158726397680230 0.157600758508184 0.164771366232191 0.152706371185013 0.167823462677208 5 5|0 -|/ 6695757 6696660 6696239.9 6695226 6701313 - gene protein_coding_gene TRUE TRUE AT5G19820.1 EMB2734 (EMBRYO DEFECTIVE 2734); lyase similar to importin beta-2 subunit family protein [Arabidopsis thaliana] (TAIR:AT4G27640.1); similar to HEAT repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98397.1); similar to HEAT repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98400.1); similar to Armadillo-like helical [Medicago truncatula] (GB:ABD28408.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.967003874463905 8.77805937030495 3.50986512330293e-06 0.000118610985347457 12.9417562099618 15.7418817078432 0.967003874463905 0.124296012526426 AT5G20050_at 7.86182738743487 7.92359761903169 8.39301288354922 8.44066770411087 8.74966697871869 8.92440293527118 7.6809599528717 7.82135076524068 8.18221428037953 7.84441472981525 8.7172415709628 8.76193206770884 8.62259173723607 8.96709316306104 8.33121942818491 8.64598400415236 8.11773824650156 8.68896569510032 7.82361976183093 0.133687211041684 0.129672800695149 0.152225295766164 0.136357883350342 0.135426757198588 0.142861606085678 0.147712651806425 0.127371214315329 0.132716418128149 0.138602850335264 0.1304164355823 0.131643056465020 0.135765052474844 0.133924188876362 0.127371214315329 0.131554405036769 0.140914630223083 0.131857627783150 0.147148892340131 5 5 + 6775145 6775704 6775445.545 6774304 6775847 + gene protein_coding_gene TRUE TRUE AT5G20050.1 protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to Protein kinase [Medicago truncatula] (GB:ABE92612.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.730758254686335 8.77650459568324 3.51571607721078e-06 0.000118651810795080 12.9401874320742 16.5027751098396 0.730758254686335 0.0410722479759549 AT5G43320_at 9.46652130983856 9.50922422639277 10.3999470456277 10.2680426644873 10.3808008908263 10.0878985256918 9.49803291922862 9.53412192872737 9.54304243007615 9.63632971365604 10.3446068997329 10.2513812194315 10.3585916797829 10.364230426376 10.0204750979833 10.5069782643322 10.3851147063946 10.3231966016000 9.56529877204203 0.0829902344122087 0.0764704226707004 0.0760160631393595 0.0786320720670736 0.0754388710788832 0.0776113293211902 0.079942874388608 0.0777364173951284 0.0779594593193407 0.0818559628758466 0.0773033020320027 0.0769098872558486 0.0759511498008873 0.0788411814440091 0.0785074070440397 0.0769718637681056 0.0792074525542252 0.0754388710788832 0.0785281690617246 5 5|0 -|/ 17403295 17404332 17403673.6 17403095 17406629 - gene protein_coding_gene TRUE TRUE AT5G43320.1 CKL8 (Casein Kinase I-like 8); casein kinase I/ kinase similar to CKI1 (CASEIN KINASE I), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G14340.1); similar to CKL10 (Casein Kinase I-like 10), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT3G23340.1); similar to CKL13 (CASEIN KINASE LIKE 13), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT1G04440.1); similar to Os02g0810400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048470.1); similar to Os02g0622100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047465.1); similar to putative casein kinase I [Oryza sativa (japonica cultivar-group)] (GB:CAD32377.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.759981037820452 8.77628417314697 3.5165464294724e-06 0.000118651810795080 12.9399650020651 19.8435131057920 0.759981037820452 0.0564265734387265 AT5G39710_at 4.20482517572525 4.44046767609419 5.61615499457692 6.17708138593375 5.12697068379306 4.65088923712738 5.30663139716766 5.76028392803064 2.91487437430122 3.76030798470828 4.73713186878744 5.66412728211322 5.50544311591602 5.28033822471153 4.79637360017369 6.12634319535442 5.38456615334828 5.39863620697569 4.27752059363419 0.269272739312054 0.257500071668603 0.260130789105356 0.260653187395237 0.258201362593108 0.263807115872200 0.259767718016711 0.263267150503697 0.27652273729241 0.260671100102765 0.267951018382865 0.261170816812108 0.256482202421529 0.260594836392297 0.257683757447333 0.256946158880717 0.274110758078322 0.264014996045295 0.261811907533708 5 5 + 15914616 15915174 15914875.091 15912957 15915200 + gene protein_coding_gene TRUE TRUE AT5G39710.1 EMB2745 (EMBRYO DEFECTIVE 2745); binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G55840.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os06g0152500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056837.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.08772050140566 8.77025694914022 3.53933404239460e-06 0.000119327825636386 12.9338807476522 9.66667352987466 1.08772050140566 0.155038046589424 AT5G44010_at 2.89999021504059 2.66770051475973 2.99302260646092 3.32275639673370 5.212363820398 4.07998500387506 1.73130514374084 1.33467224019360 1.62522217192567 1.89691451021174 2.5854779570932 2.29022237060734 2.70285482617621 2.58373200456876 2.89761939033096 2.30591816983083 3.15002915850536 2.86094834709529 1.50563654724972 0.273226289300602 0.282689967107403 0.278585648944166 0.287756943053386 0.294858883844749 0.297065669209831 0.28705634234701 0.281724715361653 0.302675641062222 0.28551235119827 0.271131396082615 0.271131396082615 0.276697090413319 0.271131396082615 0.280198598449339 0.281842216494870 0.274612226883755 0.284764480691250 0.273035149878898 5 5|0 -|/ 17724945 17725503 17725151.429 17724192 17726426 - gene protein_coding_gene TRUE TRUE AT5G44010.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD21667.1); similar to Os02g0814600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048494.1) 1.36989539833175 8.76351708953251 3.56500551257519e-06 0.000120099942980920 12.9270722258778 5.20423683656115 1.36989539833175 0.219054827482674 AT5G04410_at 9.65074144000376 9.82403671096449 10.7922392432568 10.6588376400299 10.5391972617984 10.4551733583359 9.67875068209394 9.66906737019221 9.33597315067888 9.54413369854694 10.0842560332560 9.89642893375153 10.0287940068930 9.9077868360346 9.73147548754449 10.1476319179359 10.1446501356562 10.067883129965 9.46805129324182 0.0955785176439995 0.0888497537151516 0.091573811666257 0.0902679957919079 0.093433422288076 0.0888497537151516 0.0926465260552384 0.0896953223739061 0.0972059051191164 0.0957817763652119 0.0888497537151516 0.0888497537151516 0.091776715566511 0.0945641666456004 0.0930692398458185 0.0888497537151516 0.0993125727475924 0.0891338402272562 0.0897844120314573 5 0|5 /|+ 1246054 1246393 1246236.222 1243759 1246685 + gene protein_coding_gene TRUE TRUE AT5G04410.1 NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor NAC family member, hypothetical transcriptional regulator Identical to NAC domain-containing protein 78 (ANAC078) (NAC2) [Arabidopsis Thaliana] (GB:Q84K00;GB:Q84UG1;GB:Q9LZ84;GB:Q9SNW1); similar to ANAC053 (Arabidopsis NAC domain containing protein 53), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10500.1); similar to nam-like protein 9 [Petunia x hybrida] (GB:AAM34772.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.728720043841022 8.76167278427259 3.57206537715570e-06 0.000120223199315206 12.9252082317668 19.8837551421438 0.728720043841022 0.0405779133522943 AT5G52590_at 7.36327204203882 7.75223472848527 8.12727881323307 8.50966399291425 8.37879076734228 8.22815069072509 7.3982496976383 7.61018265133044 7.27615106874545 7.32341605343968 8.47533520268224 8.42661587062442 8.26966565111608 8.57424861352492 8.11297107106813 8.56976169282537 8.00112636337132 8.1476367756161 7.33874652473899 0.126361926671849 0.124632609869901 0.132269311677853 0.132040326633495 0.129273054899789 0.129335964707813 0.131724478349928 0.127297284296236 0.139789349854216 0.137390911501506 0.127793848469614 0.127840653588718 0.126382643221523 0.121916735070825 0.133344045301166 0.124258536259518 0.131291364344777 0.131825480039498 0.140052709673594 5 5 + 21356847 21360033 21358842.267 21356846 21360210 + gene protein_coding_gene TRUE TRUE AT5G52590.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT4G27100.2); similar to TBC1 domain family, member 15 [Xenopus tropicalis] (GB:NP_989223.1); similar to TBC1 domain family, member 15 [Xenopus tropicalis] (GB:AAH76966.1); similar to Os02g0709800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047892.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.894692612821335 8.76109997420276 3.57426113189399e-06 0.000120223199315206 12.9246292279299 15.7384486083359 0.894692612821335 0.104568329886549 AT5G59800_at 4.08507472286328 3.89988087622537 4.0992610496713 4.32856297614871 4.50204503469912 4.32455723238315 3.53788813923554 3.70970190667057 3.87084465142664 4.12006865490513 5.12219183940557 5.10029538412014 5.08690908634738 4.89986167068589 4.9631403939573 5.11866421232833 4.40611161644021 5.09552730054549 3.75556419363313 0.186573690113762 0.182119258654498 0.188290451147771 0.190240486043422 0.183547776311178 0.188022574515024 0.199201570000531 0.195460319583689 0.183554498522704 0.18555652248694 0.186545310475401 0.182895628287930 0.184319544721503 0.198772251173729 0.193285303061784 0.182831969816419 0.182328100669592 0.192950637158088 0.199472256678084 5 5|0 -|/ 24111993 24112932 24112376.1 24111700 24113758 - gene protein_coding_gene TRUE TRUE AT5G59800.1 MBD7 (methyl-CpG-binding domain 7); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to Methyl-CpG binding [Medicago truncatula] (GB:ABD32284.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 0.782032674983684 8.76014143799632 3.57793876182704e-06 0.000120223199315206 12.9236602436263 8.50566158622067 0.782032674983684 0.06655251856215 AT5G49210_at 4.75931022945812 4.80821931204186 5.7268563316076 5.6048025063145 5.46768791368061 5.43862637733501 4.67822115212697 5.27282301760713 4.35495540193133 4.30204274204101 5.56199904788235 5.98938867785478 5.79082271850802 5.46174645507756 5.78541584031475 5.59537371481117 5.33159088216232 5.29007378473826 4.79857949806822 0.181514098085745 0.184130516934324 0.167272679741400 0.173079164298945 0.171603334001336 0.170240130318389 0.175578411530171 0.179973835109392 0.176776706873265 0.172841985676846 0.170556373823152 0.172680865053233 0.167272679741400 0.175699025857955 0.175014944400915 0.170596103035989 0.173723261239228 0.173043147945287 0.170848377798512 5 5 + 19967333 19968661 19967791.364 19966948 19968913 + gene protein_coding_gene TRUE TRUE AT5G49210.1|AT5G49210.2 similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to unknown [Brassica rapa] (GB:ABB97028.1) 0.897729348623855 8.7596682835428 3.57975563078481e-06 0.000120223199315206 12.9231818932284 10.2625653237792 0.897729348623855 0.105504487938751 AT5G19210_at 3.37032999201685 3.53199340897006 3.69516154196285 3.42920983125683 4.28907225714894 4.47136896058567 3.13048126072798 3.16435418865437 2.31051864135978 3.13607276925368 3.99169627310534 4.01641866669978 3.48189790292662 3.66889843717382 4.11294753147287 3.87519681420836 3.65232773287941 3.26544575500735 3.20803402099077 0.222235869592723 0.220884493538262 0.218828545861786 0.222564031920327 0.218828545861786 0.225910758409646 0.227161944714699 0.227982961292496 0.229182823062452 0.224310315651936 0.220941145166372 0.228649321720120 0.225618598233522 0.223212518942361 0.219230096081101 0.223709245695310 0.225515544203274 0.226719877587554 0.228374590455403 5 5 + 6462898 6463595 6463287.636 6461393 6463868 + gene protein_coding_gene TRUE TRUE AT5G19210.1|AT5G19210.2 DEAD/DEAH box helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 58, chloroplast precursor (EC 3.6.1.-) (RH58) [Arabidopsis Thaliana] (GB:Q3E9C3;GB:Q84W18); similar to ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT3G58510.3); similar to DEAD/DEAH box helicase, putative [Medicago truncatula] (GB:ABE77801.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650)|Identical to DEAD-box ATP-dependent RNA helicase 58, chloroplast precursor (EC 3.6.1.-) (RH58) [Arabidopsis Thaliana] (GB:Q3E9C3;GB:Q84W18); similar to EMB1586 (EMBRYO DEFECTIVE 1586) [Arabidopsis thaliana] (TAIR:AT1G12770.1); similar to putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] (GB:AAG34873.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.772570965231189 8.75837600545896 3.58472295039043e-06 0.000120233317098070 12.9218752942004 6.95673582169158 0.772570965231189 0.0626937749350814 AT5G65430_at 10.7452213817914 10.7739305658694 11.2681824303207 11.3666430984381 11.6773786746269 11.4459570478204 10.3482753015658 10.4464940909435 11.2588705134925 10.6601413151872 11.8913915479939 11.3995544529225 11.6340575518558 11.5905302330656 11.5621614521115 11.5501509680752 11.0956866589078 11.6411001388619 10.8638239088018 0.0756860730728018 0.0734106871235942 0.0754315525807171 0.0746932969628107 0.0744892299732994 0.0792168605798272 0.0735831917578494 0.0740010861755966 0.0788019280428719 0.0734337360461156 0.0746878425486793 0.0749294093037996 0.0730972802066284 0.0781408965478775 0.0775799048245286 0.0743204733726593 0.0814647210555912 0.0738322079082217 0.0731013372365389 5 5 - 26165951 26167290 26166829.727 26165427 26167568 - gene protein_coding_gene TRUE TRUE AT5G65430.1|AT5G65430.2 GRF8 (GENERAL REGULATORY FACTOR 8); protein phosphorylated amino acid binding member of 14-3-3 proteins Identical to 14-3-3-like protein GF14 kappa (General regulatory factor 8) (GRF8) [Arabidopsis Thaliana] (GB:P48348;GB:Q9SWP7); similar to GRF6 (GF14 LAMBDA), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G10450.1); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 kappa (General regulatory factor 8) (GRF8) [Arabidopsis Thaliana] (GB:P48348;GB:Q9SWP7); similar to GRF6 (GF14 LAMBDA), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G10450.2); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.739513595369731 8.75814723837274 3.5856030734639e-06 0.000120233317098070 12.9216439721334 22.2456058429061 0.739513595369731 0.0469873274722616 AT5G59210_at 7.55492946402047 7.51185688727992 8.23792655217262 8.11904281559965 8.51068323778194 8.0215068890189 7.31460141736563 7.27295166057894 7.49587737534746 7.10295235536703 8.17046674017423 8.20868370492519 7.94088687452115 8.43626229136147 8.19362007264779 8.0622342114296 7.85550079169959 8.29280202234925 7.22427802447468 0.147087996405232 0.145517205184724 0.150716050093740 0.149332492126681 0.148067943008151 0.152388400483008 0.148978530950526 0.156456726534552 0.157319304731452 0.150899164344703 0.141776600429176 0.150009142774321 0.155373317867008 0.149878727415184 0.145350177301479 0.145262457823614 0.157380441500044 0.150417369802904 0.152181035607051 5 0|5 /|- 23908030 23908638 23908347.714 23907862 23910891 - gene protein_coding_gene TRUE TRUE AT5G59210.1|AT5G59210.2 myosin heavy chain-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12150.1); similar to t-snare [Medicago truncatula] (GB:ABD33148.1); contains InterPro domain t-snare; (InterPro:IPR010989) 0.839696426620424 8.75214389331314 3.60878325540663e-06 0.000120790151322533 12.9155714494079 15.5276505356614 0.839696426620424 0.0877332176104839 AT5G45360_at 8.38290503735012 8.65113755213245 9.2497426080456 9.430463752631 9.72785563139674 9.6040227839255 8.47259625156084 8.53710269256394 8.3721801138593 8.13476441004743 8.79135345546469 8.56817649186536 8.89779666867616 8.7342996102867 8.44238440869926 8.93941833104945 8.8415853753526 8.70259217649272 8.08085681106199 0.139085326934668 0.137106169013632 0.139103623779211 0.135432553103261 0.138130746179961 0.136964184467590 0.136023012283552 0.133963603300968 0.141020132554052 0.137736814462416 0.137239232688242 0.137376772759396 0.134761478193626 0.132883549559299 0.140353062600071 0.139985689342815 0.133921407986940 0.137350698372701 0.138977374940323 5 5|0 -|/ 18402012 18403007 18402471.333 18401748 18404012 - gene protein_coding_gene TRUE TRUE AT5G45360.1 F-box family protein similar to F-box family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53635.1); contains InterPro domain UL92; (InterPro:IPR004289); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.767926423505415 8.75130214318817 3.61204638031291e-06 0.000120790151322533 12.9147196715966 17.4747955852302 0.767926423505415 0.0609645003217383 AT5G20990_at 8.3383669960514 8.29415082610647 9.31088081731649 9.10556757995474 9.01334089211714 8.867021723015 8.12556521000155 7.83533168940163 7.94577875302706 7.79598946474372 8.53190404131188 8.8780112031315 8.38666586131767 8.48216989276166 8.4985756077568 8.55080726713687 8.62063986313398 8.28029878733515 7.92819587846938 0.127490992580051 0.125757188164727 0.132522019174508 0.125850329590211 0.127413884251309 0.129056153517595 0.136677716735174 0.129263460785845 0.133788344197463 0.134598951626143 0.124924683219673 0.126790196676582 0.128035668982532 0.127409565934629 0.129421639608498 0.124525523235767 0.124151757218786 0.133051407130627 0.133234521402461 5 5|0 -|/ 7128740 7130546 7129380.143 7128477 7133478 - gene protein_coding_gene TRUE TRUE AT5G20990.1 B73 (CHLORATE RESISTANT 6); molybdenum ion binding Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling. Identical to Molybdopterin biosynthesis protein CNX1 (Molybdenum cofactor biosynthesis enzyme CNX1) (CNX1) [Arabidopsis Thaliana] (GB:Q39054); similar to OSJNBa0084K01.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE04830.1); similar to molybdenum cofactor biosynthesis protein [Zea mays] (GB:ABB30174.1); similar to molybdenum cofactor biosynthesis protein Cnx1 [Hordeum vulgare] (GB:AAF73075.1); contains InterPro domain MoeA, C-terminal, domain IV; (InterPro:IPR005111); contains InterPro domain Bifunctional molybdenum cofactor molybdenum incorporation/glycine receptor clustering protein; (InterPro:IPR012117); contains InterPro domain Molybdenum cofactor biosynthesis protein; (InterPro:IPR008284); contains InterPro domain Molybdopterin binding domain; (InterPro:IPR001453); contains InterPro domain MoeA, N-terminal, domain I and II; (InterPro:IPR005110) 0.782247553058105 8.75102319124644 3.61312846892747e-06 0.000120790151322533 12.9144373787237 16.8205892655284 0.782247553058105 0.0669686648339384 AT5G50960_at 8.86594281254215 8.77246654907304 9.56306859809592 9.5870295838755 9.6692900000295 9.41696691584963 8.81885053128083 8.9431117928967 7.74090894458365 8.06334810120454 8.67526718890992 8.6081855623692 8.71594748915984 8.53518526212765 8.65428640685349 8.7457697070614 8.60643423744368 8.7272628474341 7.8134747206858 0.123197472468531 0.126398174066499 0.123789297144505 0.124385855415687 0.12676335620499 0.125024755883327 0.129593097154616 0.124870958528164 0.142595857431195 0.128799275094824 0.123498400593040 0.128008933994299 0.123150319269291 0.130636835035986 0.123262348292619 0.124373379476382 0.135014461200171 0.130086308164647 0.126043069108257 5 5 + 20752456 20753017 20752719.727 20751393 20753281 + gene protein_coding_gene TRUE TRUE AT5G50960.1 nucleotide-binding family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to H0811E11.6 [Oryza sativa (indica cultivar-group)] (GB:CAC09490.2); similar to OSJNBa0081L15.19 [Oryza sativa (japonica cultivar-group)] (GB:CAE03157.2); contains InterPro domain Mrp; (InterPro:IPR000808) 0.74748046759652 8.75096538972585 3.61335273197736e-06 0.000120790151322533 12.9143788838215 17.4701506445360 0.74748046759652 0.0514585952371279 AT5G57610_at 7.65300678282627 7.46900694184732 8.83214461749233 8.69891402640991 8.52656352590936 8.44326489662598 8.29532066095434 8.16416767754054 7.77831407586294 8.19769081352335 8.78665555780991 8.80931586340646 8.87481469923488 8.79860889544908 8.29729194444142 9.15803626334405 9.05519641625708 8.39355381594918 8.0892240796244 0.140142899849439 0.148192965446736 0.137487859632070 0.140596727724521 0.138477546576858 0.137195431710524 0.140149385239608 0.141830376685326 0.138026504961725 0.138753466478651 0.132680440926288 0.141139806644013 0.137483139619245 0.143616764832040 0.136759544686559 0.137413951136920 0.144624232000377 0.141190792926535 0.141093341581514 5 5|0 +|/ 23345384 23346286 23345954.222 23342533 23346573 + gene protein_coding_gene TRUE TRUE AT5G57610.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G79570.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G16270.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G04700.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABG54351.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.739893721566776 8.74859800060672 3.62255088447476e-06 0.000121004339232948 12.9119827686921 16.6570122270291 0.739893721566776 0.0476281203500357 AT5G42400_at 5.29680492283757 4.69728287969716 6.45240487296604 6.29224025131639 6.81976731745079 6.04604452182758 5.28747376195308 4.46199887960792 4.995121849331 5.15938636342176 6.41400510606878 6.56937960817749 6.37548391794427 6.37161334100975 6.69169093816069 6.53521226425145 6.27785569761874 6.33608338867345 5.2630379698531 0.204497402373673 0.204992328910974 0.205994427914903 0.210674399742601 0.210854386981336 0.209508684099096 0.204947201974027 0.207960737046662 0.230200921155875 0.226551905717486 0.207952967943166 0.207429091311515 0.220202640600414 0.208038740720423 0.212720212454591 0.204497402373673 0.204798023456719 0.204980642091207 0.214167776742929 5 5|0 -|/ 16971736 16972842 16972400 16971697 16977899 - gene protein_coding_gene TRUE TRUE AT5G42400.1 SET domain-containing protein (TXR7) similar to ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX), histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding [Arabidopsis thaliana] (TAIR:AT2G31650.1); similar to PREDICTED: similar to CG40351-PA.3 [Tribolium castaneum] (GB:XP_969339.1); similar to Os12g0613200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067262.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain GYF; (InterPro:IPR003169) 1.38697880086786 8.74636396784076 3.63125415528533e-06 0.000121201679525293 12.9097210424089 11.4620509727604 1.38697880086786 0.223309937473784 AT5G49760_at 9.89100185222512 9.89084284871085 10.5036815226648 10.4049798880108 10.2289607375486 10.0107469051902 8.69407458935361 8.58008455112242 9.826178725046 9.51540996238752 10.3529043700053 10.5050988765866 10.2278806062188 10.2751536037036 9.7517987629026 10.0584611772817 9.84620236055867 10.0663319332477 9.72079257323234 0.0960268628849506 0.0965273196051275 0.0968651128204776 0.100177133496549 0.0986017489318707 0.0957065537453346 0.094857174402332 0.095556380520541 0.113479364127504 0.099522515656337 0.0975861871527608 0.0986288326364099 0.0998622701337818 0.100510110537146 0.0990517294146705 0.096446948732394 0.0988602647853775 0.0997176203511015 0.0987693895987313 5 5 + 20237684 20238440 20238067.727 20233598 20238525 + gene protein_coding_gene TRUE TRUE AT5G49760.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79620.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49770.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93732.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to putative receptor-like protein kinase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD82283.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.735554922045881 8.73465699930348 3.67723351086310e-06 0.000122641936482320 12.8978596470859 19.6870163026208 0.735554922045881 0.0459012753788889 AT5G65770_at 6.2689997156983 5.9737730398308 7.0599033200622 6.77677811784493 7.2590907036733 6.9377174747402 6.15214033903034 6.01076797736981 5.85287311144994 6.34660638966644 7.03182005269025 7.00451111969354 7.15016634468087 6.86339821576197 6.9405186308331 7.03644011741526 6.92570548688432 6.73988810223059 6.27728249633923 0.110464607837712 0.122103550960827 0.108820989126431 0.116121621834389 0.110776450035967 0.113975642845012 0.114483612897839 0.119034590734163 0.122361106741022 0.112099094043217 0.115844175206081 0.117669216651680 0.110085062927688 0.117689456183848 0.110537080272817 0.114127313111769 0.117273173404992 0.108485076131224 0.109458129189210 5 5|0 +|/ 26332101 26332746 26332421 26328813 26332770 + gene protein_coding_gene TRUE TRUE AT5G65770.1 nuclear matrix constituent protein-related Identical to Putative nuclear matrix constituent protein 1-like protein (NMCP1- like) [Arabidopsis Thaliana] (GB:Q9FLH0;GB:O49539); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67230.1); similar to Os01g0767000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044359.1); similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] (GB:BAA20407.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 0.854793739526522 8.73108088981048 3.69140415059203e-06 0.000123019920497355 12.8942332467395 13.1151346733274 0.854793739526522 0.0932868283883805 AT5G64410_at 8.80400678676827 9.13763562004988 9.58963834291583 9.56056524648662 9.7771120996963 9.5628121778227 6.95294086642552 7.46571504669149 9.3872443560395 8.80848663745355 9.76776179732658 9.51942958050354 9.52501694154675 9.65168125381328 8.8945084513575 9.92085585118113 8.80926736286757 9.21681739805114 9.13565231305352 0.166325340850921 0.162863193149976 0.165165074158454 0.165297615102290 0.162141551398016 0.175808833183648 0.168278213099386 0.170353618091102 0.178900104871428 0.171201808561689 0.162583045337174 0.161070389181119 0.159418832989827 0.162536951127799 0.159159623890045 0.163013924451859 0.170734454565497 0.168691466336374 0.161516072923485 5 5 - 25768253 25768627 25768425.091 25768071 25772278 - gene protein_coding_gene TRUE TRUE AT5G64410.1 ATOPT4 (oligopeptide transporter 4); oligopeptide transporter oligopeptide transporter Identical to Oligopeptide transporter 4 (AtOPT4) (OPT4) [Arabidopsis Thaliana] (GB:Q9FME8;GB:Q8LBQ6); similar to ATOPT2 (oligopeptide transporter 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G09930.1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to putative sexual differentiation process protein isp4 [Oryza sativa (japonica cultivar-group)] (GB:BAD08158.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE92893.1); similar to Peptidase aspartic, active site; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE84685.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) 0.917581807072662 8.72442672777942 3.71792945929737e-06 0.000123808739981196 12.8874816194430 18.1181174892386 0.917581807072662 0.112287710439497 AT5G18800_at 8.81952151629502 8.93890667460612 9.41743557614957 9.5114659994881 9.60526007849851 9.72180515669296 8.76880238177438 8.71926328061561 8.7509533675121 8.8390901054383 9.6229009736285 9.66204876202492 9.3770671993055 9.24547191077202 9.68848053504198 9.35209073990054 9.18081318269541 9.5408087749362 8.74774465082876 0.121018128534329 0.118070625978019 0.11763871140425 0.114072184746491 0.118985749049783 0.120944818061556 0.116271015447988 0.123253190620357 0.122899334932823 0.114072184746491 0.122367615893240 0.119623806281152 0.120711364116635 0.119227167442121 0.116408381636282 0.118430288802887 0.120065239164945 0.120328199315753 0.120784784213125 5 5|0 +|/ 6267308 6268363 6267663.4 6267055 6268640 + gene protein_coding_gene TRUE TRUE AT5G18800.1|AT5G18800.2 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein similar to NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein [Arabidopsis thaliana] (TAIR:AT3G06310.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96885.1); contains InterPro domain CHCH; (InterPro:IPR010625) 0.715907895623124 8.72149034296846 3.72970025794263e-06 0.000124105393880421 12.8845006153881 18.3067940668723 0.715907895623124 0.0342330883137682 AT5G02530_at 7.23635926166274 7.54661610511431 7.82388528446024 7.9662943409752 8.65234684272041 8.07803195590572 7.34712615426895 7.61257906020706 7.30745438542344 6.71404095636256 8.09285721517106 8.28540576412292 8.06717362290338 8.18420196891629 8.31380605156832 8.08747896667744 7.80783451847464 8.14545269649396 6.66584193967653 0.198523874928948 0.195408030131986 0.206847116323152 0.209389836639328 0.211432209023453 0.207602157633211 0.202796041468550 0.200873667334156 0.211581912572377 0.22022847645151 0.207264055936557 0.210410122031096 0.200002861592480 0.217650779955893 0.201857389057975 0.202944610615547 0.216865495486047 0.201914003275426 0.202225944683956 5 5|0 -|/ 564428 565345 564909.7 564084 565861 - gene protein_coding_gene TRUE TRUE AT5G02530.1 RNA and export factor-binding protein, putative similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G59950.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.960858358711141 8.71835518824243 3.74231240014223e-06 0.000124354846101032 12.8813167327145 15.2923075978453 0.960858358711141 0.124412039626028 AT5G01450_at 4.26874850626172 4.45590867380074 5.81064377953212 5.43924592681319 6.27139616166265 5.67935601368687 4.31097234746861 3.71794599620256 4.31041725802596 3.76311963278884 4.61719951798143 4.50827463675108 4.12751079592971 4.78229010555682 4.20503033139536 4.91647259753606 4.20970328516891 4.20839742120311 3.44382360038097 0.213843922092668 0.215962748806029 0.218361081581362 0.224997517177812 0.214327153017691 0.221800587387734 0.212167267821078 0.211175167416551 0.216256901894203 0.211377403618264 0.210318497882571 0.211404027412827 0.214076257330839 0.21163772887317 0.212210813743138 0.208541150390763 0.216186742357918 0.213112127133596 0.215347579674898 5 5|0 -|/ 183934 184588 184242.75 183327 186447 - gene protein_coding_gene TRUE TRUE AT5G01450.1 protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G38185.2); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABD33279.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.10975313109935 8.71820114830852 3.74293326303697e-06 0.000124354846101032 12.8811602696480 9.13726717576468 1.10975313109935 0.161892345108599 AT5G56730_at 5.32015990638656 5.28060348047105 5.9839975970667 5.83404457136792 6.49379797142209 6.29089177692963 5.35982193911264 5.05649223537645 5.22232652536435 4.49425029985564 5.36485869099904 6.05267489860023 5.61664054399061 5.61652717743678 5.56339507195463 5.40259159934984 4.96694418739352 5.06355567566428 4.64041128240466 0.184860059458723 0.186686226547795 0.183686410223414 0.195784226562425 0.190693599275068 0.183552743264724 0.188282808203969 0.186161438450315 0.211903667396150 0.187129554845545 0.184073579337945 0.181484037033005 0.189265948190018 0.192600779449286 0.191119721757277 0.181484037033005 0.217937169011198 0.18611923793753 0.182916199861759 5 5 - 22964134 22965142 22964528.909 22964132 22969802 - gene protein_coding_gene TRUE TRUE AT5G56730.1 peptidase M16 family protein / insulinase family protein similar to metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT5G42390.1); similar to chloroplast processing enzyme-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87946.1); contains InterPro domain Peptidase M16, C-terminal; (InterPro:IPR007863); contains InterPro domain Peptidase M16, zinc-binding site; (InterPro:IPR001431); contains InterPro domain Peptidase M16, N-terminal; (InterPro:IPR011765) 0.78332468349599 8.71702002986708 3.74769750641451e-06 0.000124417793548391 12.8799604813607 10.8232567763742 0.78332468349599 0.0686201466353469 AT5G09740_at 5.01949906625898 5.66008470129687 5.65596523192839 6.35856958477061 7.12621981852413 6.68230882466612 5.26099690180365 5.5573126633593 5.57561172960511 4.9129718089907 6.86955791147492 6.88690212765695 6.22773986564821 6.98241945546776 6.36057041112087 6.68460126040136 6.1697680656323 6.41283863441087 5.127765251983 0.241690797229587 0.226115061320908 0.235006593244085 0.231327261472324 0.227691981231262 0.236920178392707 0.242513261919665 0.227738172066506 0.241639455485056 0.234911635997330 0.226074224520675 0.230371645671769 0.227712691212071 0.232956123232715 0.236714372173820 0.227242320079973 0.234751242598401 0.228919195701991 0.231874572917681 5 5|0 -|/ 3022208 3022961 3022524 3021953 3024757 - gene protein_coding_gene TRUE TRUE AT5G09740.1|AT5G09740.2 histone acetyltransferase, putative Identical to Probable MYST-like histone acetyltransferase 2 (EC 2.3.1.48) (HAG5) [Arabidopsis Thaliana] (GB:Q9LXD7;GB:Q8GZ97;GB:Q8LCD4); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G64610.1); similar to MYST-type acetyltransferase [Solanum chacoense] (GB:AAQ24535.1); similar to 181 [Daucus carota] (GB:BAA32822.1); similar to histone aceytl-transferase HAC108 [Zea mays] (GB:AAL33649.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable MYST-like histone acetyltransferase 2 (EC 2.3.1.48) (HAG5) [Arabidopsis Thaliana] (GB:Q9LXD7;GB:Q8GZ97;GB:Q8LCD4); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G64610.1); similar to histone acetyltransferase protein HAC108 [Zea mays] (GB:AAM89290.1); similar to histone aceytl-transferase HAC108 [Zea mays] (GB:AAL33649.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.22507132570483 8.71616454613448 3.75115234645858e-06 0.000124437207754784 12.8790913753941 11.8049942557441 1.22507132570483 0.188690129748957 AT5G43560_at 9.2649198898427 9.3053210384092 10.1204777891640 10.0853052186582 10.1878649863327 10.1134757618729 9.20036771495749 9.24675760086256 9.4859116540385 9.19771185655467 9.92215398192142 9.79785331888162 9.84512172210086 9.86771589590254 9.6660283770555 10.1037582798304 9.73284875089177 9.95644424820772 9.33147284409906 0.0804853315498904 0.0852707077296084 0.082651708298993 0.0807247720187911 0.0810109916732574 0.0867194481269288 0.0828567691037267 0.083770852160292 0.087129206488952 0.08104484618167 0.0839898819632671 0.081675279250404 0.0810595708810865 0.0817975032340343 0.0836149745212338 0.0804853315498904 0.084958108637104 0.0821884953439244 0.0810718494898876 5 5 + 17522158 17522719 17522418.091 17517638 17522873 + gene protein_coding_gene TRUE TRUE AT5G43560.1|AT5G43560.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04300.1); similar to MATH domain, putative [Medicago truncatula] (GB:ABE87963.1); similar to Os12g0597100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067191.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) 0.697782249136941 8.71241300802034 3.76634356756855e-06 0.000124845626313379 12.8752791109522 19.290489261719 0.697782249136941 0.0177793271984812 AT5G26670_at 3.31511312888559 3.28051960443909 3.13186880796525 2.92650239352231 2.71573858231744 3.40692568278324 4.12731619461357 3.64638738649371 3.87108186581733 4.09678572338487 7.37691522575206 7.9369360292806 5.80553335685302 7.64218946652066 8.53699987906184 6.2534536308525 5.35831371950438 6.92385262883318 4.96821836966792 0.315320073652954 0.32622861347041 0.314336929483447 0.339726899026059 0.340318898508638 0.320740468089758 0.314336929483447 0.324776174519036 0.322625698430629 0.317441336348604 0.318880648771426 0.325243406165886 0.317249242959092 0.315931947421689 0.329166799840283 0.325188856103023 0.321897782052784 0.32579919219856 0.314336929483447 5 5|0 +|/ 9319998 9320792 9320394.833 9318283 9320994 + gene protein_coding_gene TRUE TRUE AT5G26670.1|AT5G26670.2 pectinacetylesterase, putative similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT3G05910.1); similar to Pectinacetylesterase [Medicago truncatula] (GB:ABD33181.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016)|similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT3G05910.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34280.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 1.06008518858232 8.70991027538789 3.77651499509028e-06 0.00012508715336022 12.8727349705188 8.96444792014702 1.06008518858232 0.150109754361479 AT5G13780_at 8.45604717934466 8.62569487978417 9.32585739072611 9.13794566219285 9.08431353185057 9.37874021588416 7.9963695929176 8.49554141992841 7.25716289619001 7.41303160295136 8.23438630174989 8.2018968998797 8.46152772357035 8.29216841331274 8.22956459418462 8.2380267302423 8.6056496231531 8.06334779341102 7.28096178564468 0.167034977823368 0.167283344904119 0.168706001731042 0.162796918588634 0.170696947461799 0.175062054804023 0.167075830182852 0.162952454046328 0.183353510699610 0.174685492624990 0.158214993119467 0.158214993119467 0.158214993119467 0.160887804226926 0.161416823423991 0.162358738931354 0.158875726665636 0.168900250358016 0.179087164543580 5 5 - 4447760 4448582 4448375.455 4447262 4448649 - gene protein_coding_gene TRUE TRUE AT5G13780.1 GCN5-related N-acetyltransferase, putative similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT1G03150.1); similar to H0410G08.10 [Oryza sativa (indica cultivar-group)] (GB:CAH67655.1); similar to Os04g0635800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054011.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.906034923589496 8.70903153524545 3.780093359369e-06 0.000125110100437959 12.8718415214548 16.6165002865119 0.906034923589496 0.109442640621182 AT5G05140_at 4.64082720142967 4.85269467951141 6.27155884884159 6.25280640951736 7.21337146385696 5.91179224736921 5.46174247620942 4.88410042295313 3.68945701532779 4.04795180692977 5.55112348711351 5.22215114737268 5.83453273381388 5.17398465953123 4.77311444501297 6.0918067302886 5.40385311227877 4.97253329869818 3.75921309398596 0.263747594005696 0.268702582192764 0.268097549383493 0.271686867545352 0.268959206811436 0.284995269116509 0.273339545178077 0.265786633692999 0.282121247090519 0.273365017264396 0.272544843732686 0.264553738634148 0.263747594005696 0.274707248351197 0.279175001554998 0.263747594005696 0.280244613708391 0.267666983044713 0.279355322738237 5 5|0 +|/ 1521443 1522225 1521701.7 1519914 1522668 + gene protein_coding_gene TRUE TRUE AT5G05140.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT3G10820.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT94036.1); contains InterPro domain Transcription factors TFIIS, elongin A, CRSP70, conserved; (InterPro:IPR010990) 1.49911059685980 8.68925177430534 3.8616186821889e-06 0.000127710862399123 12.8517072543007 10.2911590973002 1.49911059685980 0.249163758841146 AT5G43960_at 7.84531517799733 8.36515492923574 8.52251216181545 8.84958230147892 8.55467055721243 8.50964223883918 7.93520920099506 7.53989744083117 6.23770323187111 6.66208746506925 7.5844167425628 7.9968451361832 7.37998327695926 7.32349221458383 8.45280644868155 7.72035290684281 8.05323792382588 7.6287729141546 6.67102251717295 0.231291409817467 0.218602281106556 0.218891972368754 0.222626396127070 0.229102024162563 0.249755031574293 0.224579628262189 0.218100150220779 0.247206938800600 0.221132317728645 0.227506741326605 0.226534525480832 0.225987533999235 0.228414334841233 0.223028570347917 0.228450861772605 0.238048023116034 0.224414454876105 0.243347646554182 5 5|0 -|/ 17706384 17707423 17706981.4 17706015 17709166 - gene protein_coding_gene TRUE TRUE AT5G43960.1|AT5G43960.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to RNA-binding re (GB:ABE92036.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71299.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to RNA-binding re (GB:ABE92036.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.96579583417074 8.68790901425464 3.86722166268018e-06 0.000127755066734888 12.8503388012714 15.41079442614 0.96579583417074 0.126638558161468 AT5G11010_at 5.44497122564624 5.72297491259371 6.46624684392341 6.5887653552706 6.37877436826325 6.55318177224996 5.1959633676041 5.82013606527215 4.68785295594826 4.45639903367044 5.21534625564033 5.22399254414369 5.62044760764101 5.27999947238416 6.0223340354436 5.91123456300017 5.63676148781585 5.50692917334936 4.6319058268722 0.225422802123254 0.224114541323942 0.228723121697231 0.221412955948586 0.223023445174425 0.223729011800351 0.219761471186356 0.217218520001271 0.222641926528501 0.229722440866228 0.219050413856670 0.219462795947856 0.217218520001271 0.227444253751015 0.228988520871024 0.2197055858438 0.224666694895966 0.22278308555147 0.223344571352318 5 5|0 +|/ 3485008 3485775 3485389.3 3483705 3486268 + gene protein_coding_gene TRUE TRUE AT5G11010.1|AT5G11010.2|AT5G11010.3 pre-mRNA cleavage complex-related similar to pre-mRNA cleavage complex family protein [Arabidopsis thaliana] (TAIR:AT3G04680.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52595.1); similar to Os01g0354700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042993.1); similar to Os01g0184000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042230.1); contains InterPro domain NUC156; (InterPro:IPR012581); contains InterPro domain Pre-mRNA cleavage complex II Clp1; (InterPro:IPR010655) 0.955404364539028 8.68725299338951 3.86996226317052e-06 0.000127755066734888 12.8496701525103 11.0934683628150 0.955404364539028 0.123864875643438 AT5G58620_at 2.61480358753155 2.66535970025748 3.46466438103925 3.71234708296613 2.85084433323579 2.88186676490739 1.94597556734290 2.08495326826552 1.93142812855849 1.98254510634158 2.36367948161773 2.77068076706295 2.16464088060926 2.59638041408490 2.47724955677512 2.49697380724658 2.71959717056271 2.5799136773199 1.91108211466987 0.208183908223014 0.208301411327618 0.2123477573496 0.221078410018573 0.206894255236577 0.213898423417132 0.21114695032815 0.209146573430569 0.220441886969444 0.213513034190907 0.206894255236577 0.209008559300224 0.214928071383641 0.21944785785424 0.206964017371064 0.207177072011086 0.215236458800511 0.211939042953648 0.212396558394362 5 5 + 23712419 23712839 23712625.727 23710566 23713448 + gene protein_coding_gene TRUE TRUE AT5G58620.1 zinc finger (CCCH-type) family protein similar to CZF1/ZFAR1 [Arabidopsis thaliana] (TAIR:AT2G40140.2); similar to Cys-3-His zinc finger protein [Capsicum annuum] (GB:ABI30334.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.73955598128718 8.68681456664011 3.87179501209835e-06 0.000127755066734888 12.8492232588273 5.00901412865985 0.73955598128718 0.0502096669307412 AT5G08160_at 8.5224446989252 8.61053298843117 9.19258027534686 9.08091564703237 9.23643055590778 8.75060962186842 8.74054752249242 8.44018754379999 7.99100088439437 7.30742737953146 8.86952340898359 8.88629620941248 8.52427499394091 8.64142999724745 9.09110884790854 8.31116458916442 8.35081200676843 8.83888871697734 6.96289204803425 0.120387924842971 0.121374101781947 0.130393327087807 0.120408915664601 0.121300449457383 0.125312877732739 0.120134536465079 0.122361370000448 0.132736668423432 0.124760011356299 0.125348988106269 0.119988820704383 0.126079467128591 0.132503522638362 0.123183673180508 0.124773837769258 0.132139730225044 0.119856321873610 0.132542729792814 5 0|5 /|- 2625930 2626636 2626293.5 2625560 2628111 - gene protein_coding_gene TRUE TRUE AT5G08160.1|AT5G08160.2 ATPK3 (Arabidopsis thaliana serine/threonine protein kinase 3); kinase Encodes a serine/threonine protein kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.2); similar to putative serine-threonine protein kinase [Cucumis sativus] (GB:CAI30891.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.2); similar to putative serine-threonine protein kinase [Cucumis sativus] (GB:CAI30891.1); similar to serine/threonine protein kinase [Gossypium hirsutum] (GB:AAZ39949.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.877726539470181 8.68332534054846 3.88641451553296e-06 0.000128139937870205 12.8456658613185 16.8765948318691 0.877726539470181 0.101862426067468 AT5G44480_at 3.11372648579107 3.08561116878202 4.96261399804175 5.22136074651528 2.67552652689123 2.73232358191975 1.57528601897025 1.71978701136968 1.91738313395393 2.1820782817645 1.96390006486369 1.83336764073884 1.99993495104084 2.21779832085450 1.87571148957169 1.88501024794136 2.10211083418349 1.88406681273702 1.92270474567007 0.248666269400284 0.2636438218615 0.277386138695192 0.286143255655322 0.250024804341826 0.261213572324708 0.248883241336678 0.243981047885575 0.26643635400496 0.249384199741504 0.245992304604078 0.249602641969295 0.244816722180641 0.252186331192006 0.251133406467444 0.241941172783817 0.258062761643373 0.256089588470794 0.245252158125116 5 5|0 +|/ 17939953 17940782 17940360.5 17938742 17940870 + gene protein_coding_gene TRUE TRUE AT5G44480.1 DUR (DEFECTIVE UGE IN ROOT); catalytic mutant has Altered lateral root; UDP Glucose Epimerase Identical to Putative UDP-arabinose 4-epimerase 4 (EC 5.1.3.5) (UDP-D-xylose 4- epimerase 4) [Arabidopsis Thaliana] (GB:Q9FI17); similar to MUR4 (MURUS 4), catalytic [Arabidopsis thaliana] (TAIR:AT1G30620.2); similar to NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] (TAIR:AT4G20460.1); similar to Putative UDP-arabinose 4-epimerase 3 (UDP-D-xylose 4-epimerase 3) (GB:Q9SUN3); similar to Putative UDP-arabinose 4-epimerase 2 (UDP-D-xylose 4-epimerase 2) (GB:O64749); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886) 0.743601183446173 8.68249388173581 3.88990705399283e-06 0.000128157632946851 12.8448179513247 5.12459257513726 0.743601183446173 0.0524463545698893 AT5G13890_at 5.8473305081722 6.31967444990582 7.08840059131917 7.03595166959786 7.41853517244205 6.66813770675995 5.51443204110762 5.66880121268368 5.69939107622461 5.25244630095819 5.77489619017177 6.3761860250069 6.04050412899531 6.26027648818514 6.61059130939169 6.27750968525717 6.18145728213802 6.32391501749068 4.90316415846300 0.213322406630967 0.213887889134593 0.222716491745600 0.213330301264701 0.217414408831358 0.232075272934703 0.210748356371217 0.220581318351888 0.234588146328536 0.216340234383062 0.210748356371217 0.212379717893355 0.217773141171834 0.217241358846583 0.213441609123162 0.212403568648167 0.218750737552764 0.210967749590348 0.210982032749483 5 5 - 4479946 4480403 4480155.545 4478845 4480923 - gene protein_coding_gene TRUE TRUE AT5G13890.1|AT5G13890.2|AT5G13890.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49470.1); similar to Protein of unknown function DUF716 [Medicago truncatula] (GB:ABD33160.1); contains InterPro domain Protein of unknown function DUF716; (InterPro:IPR006904) 1.08043161800504 8.67907714474139 3.90429475294094e-06 0.000128533982669876 12.8413327768279 12.2029916828543 1.08043161800504 0.156016806759001 AT5G16440_at 4.39994421452038 5.22823552504905 4.63659418026255 5.29525828629107 5.51797851771694 5.39320189018002 4.14168187018179 4.16706447325043 3.9553241256187 3.78573388553157 5.84278739295187 5.82735034582679 4.93898481348237 5.36190074683132 6.17645939957239 5.77618287995603 4.81409128772413 5.18115665097738 3.70527156404714 0.242771079186494 0.230706311643262 0.237111005201132 0.234891890094519 0.230706311643262 0.233217239769281 0.245215312309957 0.246261681773778 0.240529755211482 0.237934646536082 0.232943191274236 0.233829030854379 0.235246551072453 0.246578457523019 0.232426138837987 0.230706311643262 0.246058366504183 0.234377908829507 0.243421134086920 5 5|0 +|/ 5372541 5373453 5373057.5 5371630 5373738 + gene protein_coding_gene TRUE TRUE AT5G16440.1 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. Identical to Isopentenyl-diphosphate Delta-isomerase I (EC 5.3.3.2) (IPP isomerase I) (Isopentenyl pyrophosphate isomerase I) (IPP1) [Arabidopsis Thaliana] (GB:Q38929;GB:Q42552;GB:Q9FFE1); similar to IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLLALLYL PYROPHOSPHATE ISOMERASE 2), isopentenyl-diphosphate delta-isomerase [Arabidopsis thaliana] (TAIR:AT3G02780.1); similar to isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Brassica oleracea var. botrytis] (GB:AAF36996.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Isopentenyl-diphosphate delta-isomerase, type 1; (InterPro:IPR011876); contains InterPro domain Isopentenyl-diphosphate delta-isomerase; (InterPro:IPR002667) 1.20047384789753 8.67325164995989 3.92895863416999e-06 0.000129196509581273 12.8353875012709 9.5001485603804 1.20047384789753 0.184456983215934 AT5G45510_at 10.5148780488252 10.7506854847591 10.8965243919803 10.8999430072014 10.7095069311805 10.5315962522493 9.79978889872187 9.72111023388658 10.0900375120569 9.4740500560879 10.7455981709553 10.5765760541321 10.1911978769244 10.4856673481327 10.4383020285667 10.4451467929474 10.4348988195435 10.7264091277268 9.17843781457466 0.112496574309398 0.0986865181999904 0.100267750324094 0.103418376600187 0.101691634053860 0.101888335930794 0.101436224148944 0.101043303770200 0.112865557150219 0.101771909962383 0.101549896672290 0.0995014627199365 0.0986865181999904 0.106108051585353 0.101236463053064 0.0999710444351126 0.0993133917804142 0.102142533212926 0.106501504759259 5 5 + 18465493 18466244 18465742.556 18461884 18466673 + gene protein_coding_gene TRUE TRUE AT5G45510.1|AT5G45510.2 leucine-rich repeat family protein|protein binding Identical to Probable disease resistance protein At5g45510 [Arabidopsis Thaliana] (GB:Q8VZC7;GB:Q9FHI5); similar to mob1/phocein family protein [Arabidopsis thaliana] (TAIR:AT4G19050.1); similar to Putative disease resistance protein At4g19050 (GB:O50052); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.74370485611547 8.67291736573488 3.93037902922844e-06 0.000129196509581273 12.8350462252264 20.5211623169035 0.74370485611547 0.0529047596788117 AT5G44200_at 7.46973656861123 7.11463288601933 7.68437280283206 7.63209356071744 8.30824410351773 7.99856697177384 7.03395753562631 7.02334787593415 7.29687635191573 7.33497112313111 8.27242520965082 8.2406038483514 8.21367102836983 8.29507936786494 8.14134041838006 8.20567639411165 7.98064740323992 8.1875232777236 7.29145051267715 0.16998432710633 0.163506009973167 0.171992482633393 0.176438454841024 0.165705050239609 0.168497111703812 0.172201592373561 0.172205280696225 0.162448939123156 0.165856799638683 0.164996946954368 0.167005504687438 0.159309042214411 0.170289577612037 0.167463268627494 0.167196818304217 0.164630560540208 0.165297603405945 0.179961229160477 5 0|5 /|- 17819326 17820505 17820009.167 17819041 17821357 - gene protein_coding_gene TRUE TRUE AT5G44200.1|AT5G44200.2 CBP20 (CAP-BINDING PROTEIN 20); RNA binding|CBP20 (CAP-BINDING PROTEIN 20) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed. similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G37720.1); similar to cap-binding protein [Mirabilis jalapa] (GB:AAT07459.1); similar to Os02g0612300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047412.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.814877757858022 8.6666637378972 3.95705383017423e-06 0.000129974803477159 12.8286594267653 15.2830624703138 0.814877757858022 0.082058615777087 AT5G39950_at 10.5898962500697 10.7347140639455 11.5659906968127 11.4131951244093 11.3800554797512 11.1401351430197 10.2910247233554 10.1833139261397 10.2293801855372 10.0811853209072 10.6664247727027 10.6702523151380 10.5757716756168 10.5983893387985 10.3976882262588 10.689424558328 10.5378394325557 10.9941534218671 9.8622361926596 0.088407060276735 0.0867145623660367 0.0867145623660367 0.08972775158076 0.0883395068756072 0.0888171062588893 0.0867145623660367 0.0901049871225427 0.0927258315327907 0.0890633713434925 0.0905391018016507 0.0898280025495611 0.0899069057821572 0.0896364789175458 0.093022353637752 0.0878792873438248 0.0907064323351985 0.0875515035904699 0.0934055231703915 5 5|0 -|/ 16008192 16009082 16008798.222 16007915 16009159 - gene protein_coding_gene TRUE TRUE AT5G39950.1 ATTRX2 (Arabidopsis thioredoxin h2, thioredoxin H-type 1); thiol-disulfide exchange intermediate encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. Identical to Thioredoxin H-type 2 (TRX-H-2) (TRX2) [Arabidopsis Thaliana] (GB:Q38879;GB:Q39240); similar to ATH8 (thioredoxin H-type 8), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G69880.1); similar to thioredoxin h (GB:AAC49353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Thioredoxin; (InterPro:IPR005746) 0.754374635705427 8.66479684647697 3.96505498005231e-06 0.000130139021935753 12.8267519071932 21.261712442951 0.754374635705427 0.0582970974818084 AT5G42220_at 7.88470667372092 8.03249830732813 8.65918073996823 8.63530347973225 8.99359443837093 9.00274268989612 7.7055921263989 7.91249540986987 7.92092438145395 7.66062700474547 8.4452373162015 8.36219027855867 8.37620013156194 8.38255315802957 8.13371599876709 8.67394343916766 7.84041138788665 8.47562271991764 7.88499077075254 0.162973801706785 0.150646872231045 0.149810225341158 0.151960931860846 0.154030537846634 0.151966339409381 0.153133604404445 0.152178883319014 0.165295173808761 0.160409213859928 0.149810225341158 0.156274751002505 0.151531106941361 0.163176785708278 0.154744486306809 0.149810225341158 0.172812600020066 0.162305771303658 0.158161546322598 5 5 + 16893793 16894518 16894116.545 16889571 16894894 + gene protein_coding_gene TRUE TRUE AT5G42220.1 ubiquitin family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25270.1); similar to putative calreticulin interacted protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30454.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.72646789621989 8.66172199434481 3.97827143071192e-06 0.000130474036428890 12.8236092634586 16.4324717445333 0.72646789621989 0.0442238983158296 AT5G17610_at 5.13513012811361 5.52868555741685 6.46387726283448 6.30585095357099 6.92580369983495 6.38609583975889 5.14129065910598 5.70365284034528 4.69012710745326 4.93441692307064 6.16508057114571 5.93506695203075 6.08869174557602 5.89950640742214 5.72525278717807 6.05183060257374 5.70235145216173 5.3809132388404 5.00380909638405 0.209580643932099 0.204701387458548 0.208259473714716 0.226222354396028 0.206656856722559 0.221363225714615 0.210644512077578 0.213984996700852 0.205993497609402 0.204701387458548 0.215115511073817 0.204701387458548 0.216681024482772 0.215080333864126 0.214653622691981 0.206532170800935 0.216727532350675 0.208754328412999 0.210993839780376 5 5|0 +|/ 5804013 5805023 5804447.571 5803938 5805297 + gene protein_coding_gene TRUE TRUE AT5G17610.1 similar to Putative DNAJ protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05335.1); contains domain alpha/beta-Hydrolases (SSF53474) 1.06784307670058 8.6586403400535 3.99156498191603e-06 0.000130811071204781 12.8204585744002 11.3211505819153 1.06784307670058 0.153560442564399 AT5G51340_at 6.97851905801431 7.07759157203611 7.72981139498788 7.62063255275928 8.29279656823622 7.54582088242516 6.66210042044116 6.42717772473842 5.55625200669701 5.6945190402265 6.52751720989061 6.81883346073081 6.693097482008 6.77812053779461 6.57655968286228 6.41535048343205 6.50986530659262 7.11709697029323 5.78977273012759 0.164281579990222 0.163463141855284 0.167029943246596 0.171644318337368 0.164627739091378 0.170055713983794 0.165916988983743 0.166302223069025 0.177419831102811 0.171862627291053 0.165373670655396 0.164217366547577 0.159784601264262 0.166958980748165 0.163695931139332 0.160831911452984 0.171477012734382 0.161340539803368 0.171072495809267 5 5 + 20883419 20884333 20883810.182 20880169 20884596 + gene protein_coding_gene TRUE TRUE AT5G51340.1 binding similar to Os04g0347600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052515.1); similar to PREDICTED: similar to CG4203-PA [Apis mellifera] (GB:XP_394668.2); similar to OSJNBa0020I02.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD40351.2); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.00514601923907 8.65636708430602 4.00140210597557e-06 0.000131034408818228 12.8181336918313 13.4716744720636 1.00514601923907 0.137890660978772 AT5G16970_at 8.505867579545 9.14741759562131 9.20462846969146 9.40507298276622 9.67347714176931 9.46044381815355 7.94081800666408 8.40361894310014 6.11371540109652 7.2625237043132 6.98036548928776 7.96802638881958 8.1295413732784 7.97063629720358 7.73901465784045 8.54035226648711 8.1856278650605 7.7683513967529 6.94452240223647 0.169593550724849 0.167147355559508 0.166695612322626 0.168598289364492 0.169966601867984 0.168090461429911 0.167127322971531 0.16993178412229 0.175714847528474 0.168429775679758 0.17064042461331 0.166695612322626 0.166695612322626 0.176099381349019 0.175050227496709 0.167459193891337 0.184319645038771 0.166695612322626 0.176383788924670 5 5|0 -|/ 5576352 5576811 5576462.778 5576171 5578078 - gene protein_coding_gene TRUE TRUE AT5G16970.1 AT-AER (ALKENAL REDUCTASE); 2-alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls Identical to Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74) (P1) [Arabidopsis Thaliana] (GB:Q39172); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 1.03656368474420 8.65355398138042 4.01361167577162e-06 0.000131335041457209 12.8152558768150 16.3095813851922 1.03656368474420 0.145955203167777 AT5G56160_at 1.7784161479296 1.54700729185699 2.79765298102499 2.87595431373975 3.64540655723239 2.78509761805302 2.04346558824116 2.00210726311771 1.72984723070204 1.78324355679344 2.65017406257266 2.27550074884858 2.70875627258568 2.85288597357994 2.67258752229750 2.76110385322353 2.73078874654956 3.04810012258526 1.73834434857797 0.203068305340951 0.203068305340951 0.21322448409353 0.206020456656185 0.208436039850057 0.215086887440831 0.206444978090504 0.215490565399508 0.212264315208176 0.212693527189284 0.206442277913472 0.208217442020761 0.203305212116460 0.204927194190046 0.210398840553410 0.203416863579317 0.223982719657681 0.203860568685216 0.203068305340951 5 5|0 +|/ 22751649 22752293 22752015.1 22749200 22752816 + gene protein_coding_gene TRUE TRUE AT5G56160.1 transporter similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.2); similar to Os02g0721800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047963.1); similar to Os08g0341700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061591.1); similar to Cellular retinaldehyde-binding/triple function, N-terminal [Medicago truncatula] (GB:ABE79642.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273) 1.07264378940768 8.6521870386077 4.01955910419544e-06 0.000131430462838427 12.8138571595798 4.6658712408852 1.07264378940768 0.154932076023797 AT5G15540_at 6.2414503659597 6.3753009760628 7.14064711781833 7.18615350589474 7.39566368580344 7.10709440551976 5.72560736414877 6.02108290950448 5.93821425317343 5.73565490202847 5.93357360424892 6.21137358931993 6.45105272581207 6.31971414761631 5.85860095641772 6.49454322601518 6.56164765389286 6.62546146631603 5.82885894034469 0.194535348994408 0.183585619223131 0.193687245795032 0.192152292814655 0.190001487405830 0.197248803332633 0.191125522219458 0.183835169669208 0.194330978197232 0.199367880774185 0.191558913894178 0.181354582824091 0.188194828392577 0.181354582824091 0.182939578961267 0.189444008568643 0.189408583031568 0.181354582824091 0.181354582824091 5 5|0 -|/ 5048039 5048744 5048413.111 5047676 5057414 - gene protein_coding_gene TRUE TRUE AT5G15540.1 binding similar to hypothetical protein MtrDRAFT_AC149305g25v2 [Medicago truncatula] (GB:ABE89482.1); similar to PHD-finger, putative [Medicago truncatula] (GB:ABE89485.1); similar to putative IDN3 protein isoform A [Oryza sativa (japonica cultivar-group)] (GB:BAD30168.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.794641248764741 8.64328382409415 4.0585302866083e-06 0.000132604728516667 12.8047417136828 12.7197443511992 0.794641248764741 0.0755448217014215 AT5G28030_at 8.16370903635849 8.05565928281388 9.6136462507557 9.51685024028811 9.85372526612708 9.3446588469419 9.87463753040983 9.61324367765417 8.16888714076167 8.71102416118027 9.47301238977569 8.97388722245428 9.27164750795014 9.21507938247034 8.25849314922007 9.54288801868247 9.7049879137210 9.50440819193483 7.56989705550207 0.132226385080851 0.132359240155455 0.13276327429122 0.133040288204250 0.133265715006713 0.132819000303763 0.132409573987476 0.132346940163671 0.140257678244722 0.133926694657114 0.127151261598405 0.123569611350950 0.123569611350950 0.127560523551495 0.135441191892870 0.127061308064926 0.129835530890132 0.129537819014842 0.140351528249148 5 5 - 10030523 10031540 10031134.455 10030410 10032455 - gene protein_coding_gene TRUE TRUE AT5G28030.1|AT5G28030.2 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to ATCYSD2 (Arabidopsis thaliana cysteine synthase D2) [Arabidopsis thaliana] (TAIR:AT5G28020.6); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926); contains InterPro domain Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; (InterPro:IPR001216); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859) 0.874261061048603 8.63922091093454 4.07645023343069e-06 0.000133089934719284 12.8005789082458 17.9510095620057 0.874261061048603 0.102163767583922 AT5G63370_at 8.11761824268783 8.14085740502649 8.95426372296066 8.84727038078752 9.38578008567275 8.66490622964282 8.02693833678365 7.31173542678848 7.6105525903049 7.5645939657575 9.0682650990487 9.04722430569668 8.838776172782 8.91607774100198 8.7976724927732 9.10226707239767 8.52261129491636 8.87828408443708 7.73218782743211 0.162693031513202 0.158063280494027 0.164706292854844 0.157523563890266 0.161719051090881 0.170555854752839 0.165669807966481 0.171638484151347 0.176568327908826 0.175954233236282 0.157795996108384 0.157523563890266 0.161268928759524 0.162958818101286 0.167722135227790 0.162122623177702 0.172642630939762 0.174847270431963 0.162163999865934 5 5 - 25402190 25402667 25402451.636 25401132 25404450 - gene protein_coding_gene TRUE TRUE AT5G63370.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67580.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82023.1); similar to Os02g0602100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047355.1); similar to Os04g0488000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053147.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.16219345349727 8.63727347226675 4.08506998705866e-06 0.000133271001968187 12.7985829127818 16.6972589341504 1.16219345349727 0.17674990022502 AT5G03030_at 7.98363729692425 8.30062847875269 9.20261230516655 9.07251611305672 9.05262362859945 8.81113992961346 8.56125160859136 8.56673118636587 7.81871700853803 7.85081575811541 8.77906288300219 8.69863225550554 8.62627527711228 8.89464174743079 8.59788298880597 8.97339482841515 8.83409292689102 8.789529875727 7.98140630084802 0.139531808331633 0.137685630094898 0.138176929849010 0.133460367992199 0.128887740702505 0.137169142027353 0.126479975746211 0.137195180805891 0.140526282956321 0.132980896726469 0.137799473607507 0.126479975746211 0.127188376751753 0.136763504790065 0.132314426618369 0.129702560017689 0.140837457398521 0.129316413168238 0.132996283958337 5 5|0 -|/ 708538 709090 708880.2 708316 709701 - gene protein_coding_gene TRUE TRUE AT5G03030.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G09700.1); similar to Os01g0157800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042072.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65026.1); similar to Os07g0192300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059099.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.786101796738961 8.63650254179098 4.08848772942328e-06 0.000133271758598645 12.7977926390462 17.0228102952313 0.786101796738961 0.0725495082196858 AT5G61420_at 9.71475122132673 9.5467883119926 10.6276635092909 10.5344274044085 10.9837414804583 10.6033101110394 10.7156998013091 10.2701818796848 8.88589902270594 10.3192765063819 11.0211342514255 10.9242892002417 10.9002761630983 11.1996426526181 10.3765719458824 11.0297588777415 10.9318180182473 11.0225896739947 10.1140539720856 0.105728075462783 0.103736701910887 0.0998516495725075 0.100397150294839 0.103147364613282 0.102858459830989 0.105781977899739 0.0989944609668542 0.127380975130778 0.098819960929608 0.101191738423051 0.100309136934198 0.100133614139465 0.102960518623295 0.106799950934848 0.098819960929608 0.104204617633794 0.104333484436252 0.103311968584411 5 5 - 24706714 24707228 24706968 24706377 24708321 - gene protein_coding_gene TRUE TRUE AT5G61420.1|AT5G61420.2 MYB28 (myb domain protein 28); DNA binding / transcription factor Encodes a putative transcription factor (MYB28). similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to PH4 [Petunia x hybrida] (GB:AAY51377.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to MYB1 [Dendrobium sp. XMW-2002-1] (GB:AAO49410.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.889056960117991 8.63588204679525 4.09124079909647e-06 0.000133271758598645 12.7971565254255 20.7239887640875 0.889056960117991 0.106694727202962 AT5G02490_at 7.72691759691906 8.17539831152688 9.31290366377617 9.69042789765672 7.62990676075841 7.29627225324439 5.25537400810734 5.37188700429776 5.84439357886075 6.23653180135416 6.03746124030164 6.00374028290462 5.56038042110733 6.021445351986 5.81029592182626 6.4645671793464 5.55409424013228 6.03775687555573 5.70429233818084 0.32098776795482 0.337769272844053 0.352693792210705 0.365337719949116 0.324441934555603 0.335756342732801 0.326424407261940 0.321956630386757 0.326456458891670 0.320507919608412 0.320507919608412 0.320507919608412 0.320507919608412 0.326824138978987 0.328296622993980 0.320507919608412 0.323878447190422 0.320507919608412 0.321281418383843 5 5 - 550302 550860 550522.909 550033 552643 - gene protein_coding_gene TRUE TRUE AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) Identical to Heat shock cognate 70 kDa protein 2 (Hsc70.2) (HSC70-2) [Arabidopsis Thaliana] (GB:P22954;GB:Q9LZ53); similar to HSP70 (heat shock protein 70), ATP binding [Arabidopsis thaliana] (TAIR:AT3G12580.1); similar to heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) [Arabidopsis thaliana] (TAIR:AT3G09440.1); similar to HSC70-1 (heat shock cognate 70 kDa protein 1), ATP binding [Arabidopsis thaliana] (TAIR:AT5G02500.1); similar to heat shock protein 70-3 [Nicotiana tabacum] (GB:AAR17080.1); similar to heat shock protein 70 [Oryza sativa (indica cultivar-group)] (GB:CAA47948.2); similar to heat shock cognate protein HSC70 [Brassica napus] (GB:AAB88009.1); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) 0.92889759832964 8.62471847826765 4.14111674261479e-06 0.000134795188834755 12.7857043469873 13.4896977346743 0.92889759832964 0.118456740482217 AT5G18520_at 8.96068534413098 9.26278069071235 9.71960981875003 9.84117668319673 9.84141027542595 9.70877637490036 9.33419161707293 9.66446318358978 9.02649602427973 8.5560233037468 9.9904132717811 10.0077138550495 9.88690671276176 9.75316933559403 9.8567105281566 9.92973731302889 9.5902473005368 9.87465393496127 8.52875099639539 0.150710357264457 0.140353310305200 0.145958644298762 0.148154194458385 0.140353310305200 0.151260735256957 0.146883437679482 0.143665436977969 0.172345351064057 0.146034749262799 0.146215214116089 0.143109139254587 0.140353310305200 0.153886712531643 0.152187884487736 0.141191723318870 0.156972227191192 0.148240952957517 0.146664445132903 5 5 + 6145772 6146312 6145982.818 6144965 6146572 + gene protein_coding_gene TRUE TRUE AT5G18520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09570.1); similar to Os01g0836800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044733.1); similar to Os05g0462500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055767.1); similar to unknown [Sorghum bicolor] (GB:AAQ06259.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 0.814825167934096 8.62277756025105 4.14985523431671e-06 0.000134978295563250 12.7837117786907 18.8241121516179 0.814825167934096 0.0834818209692596 AT5G05800_at 6.81009071075394 6.66941498528394 7.66443051607202 7.75838930150428 8.3232676745205 8.06163544572455 6.98919902844295 6.95375602077144 6.96414634130346 7.0726695927329 7.44728418895463 7.51004644193845 7.33516821754287 7.6850506523214 7.37476012609893 7.8533195176755 7.32812958490247 7.59698778612649 7.348816059197 0.206602020105894 0.190067753920007 0.206644890273448 0.200799958988196 0.194016750376598 0.213805210114607 0.189005936530475 0.198691742075759 0.233278251869909 0.193996643267375 0.200910210627579 0.189005936530475 0.198598293269345 0.193524930024841 0.199272704424606 0.194872018243864 0.207709716064414 0.198438729648360 0.191255749687771 5 5 - 1743237 1743757 1743525.364 1743087 1745246 - gene protein_coding_gene TRUE TRUE AT5G05800.1|AT5G05800.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11290.1); similar to PIF-like orf1 [Daucus carota] (GB:ABB83643.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) 0.742057432421457 8.62146793747439 4.15576275607669e-06 0.000135069116595127 12.7823670586697 14.7262166164790 0.742057432421457 0.0542645848503946 AT5G60750_at 8.17696321484751 8.0422132994027 8.88019114725949 8.79664935117514 9.04431117719124 8.68628091792739 7.90201768023554 7.86325900217988 8.07695313080627 7.68011147484432 8.53353884014741 8.44745462080188 8.7042128853347 8.52778046416544 8.51495240104507 8.69919484165188 8.18661940543458 8.4797412850415 7.70522628979364 0.154661506210712 0.153491584398747 0.161168678172031 0.153285549491592 0.160316604367170 0.164549474155102 0.157290614631114 0.163689545402783 0.166182425845717 0.166949509542376 0.158330386720484 0.154811419849205 0.159075964788025 0.171867345297370 0.156375699534668 0.153285549491592 0.175427577291099 0.166116808819671 0.165938346219869 5 5 + 24449854 24450355 24450079.909 24448117 24450586 + gene protein_coding_gene TRUE TRUE AT5G60750.1 CAAX amino terminal protease family protein similar to CAAX amino terminal protease family protein [Arabidopsis thaliana] (TAIR:AT1G14270.1); similar to Abortive infection protein [Medicago truncatula] (GB:ABE87113.1); contains InterPro domain Abortive infection protein; (InterPro:IPR003675) 0.773334030179989 8.62039220722229 4.16062203182334e-06 0.000135125757368445 12.7812623507493 16.5902109611611 0.773334030179989 0.0680931450830426 AT5G10750_at 6.8058950867666 7.34440005915751 7.96695221703308 7.82127196607984 8.03838393319176 8.04544925564214 6.76213783737158 7.33095535572808 6.36906593982913 6.04589009285264 7.07881857051392 6.96461790027057 7.87837396742159 7.60245678797496 7.22341360211319 7.47276244318572 7.41249109632022 7.28758725857704 6.39860946417931 0.188860618716158 0.184851942195237 0.183377719093069 0.184968392934948 0.185638753576771 0.188187768845314 0.183725305864636 0.180048652642649 0.202899686588004 0.182991465109269 0.178875814414887 0.180102334248945 0.17886216963372 0.177259989614449 0.177259989614449 0.177259989614449 0.191855127612717 0.187532669346461 0.187729573630168 5 5 + 3399407 3399913 3399631.182 3398952 3400157 + gene protein_coding_gene TRUE TRUE AT5G10750.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24990.1); similar to Os10g0455900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064750.1); similar to Os08g0152600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061005.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769) 1.00052198128711 8.61684528790048 4.17668775535612e-06 0.000135545996061573 12.7776189357325 14.3325575649967 1.00052198128711 0.137881636389735 AT5G56370_at 1.11413972930434 1.54115595969628 1.51285743772783 1.80715300343419 2.79190743010777 2.05729876726262 1.10973743748120 1.36693097171179 0.676879050655802 0.488701698421581 1.57330778345376 2.38146167013283 2.36395042573749 2.00679130150745 2.10431783381173 2.54833135945880 2.38383572761520 1.90700864611009 1.01215552545442 0.194742390664327 0.186355805050695 0.186355805050695 0.19562588186735 0.201004540762913 0.193718676558107 0.190701000763104 0.191710244663923 0.199635595633316 0.202898529855928 0.199274362975543 0.191222972738497 0.190012695867368 0.197522945163617 0.194742568729593 0.193845416723315 0.190894576747159 0.195640129559398 0.193489216654031 5 5|0 -|/ 22853533 22854084 22853861.556 22853208 22855167 - gene protein_coding_gene TRUE TRUE AT5G56370.1|AT5G56370.2 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56420.2); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE78248.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.09601331852626 8.61148279434892 4.20110474450541e-06 0.000136220700462545 12.7721077836521 3.10491643458526 1.09601331852626 0.161854793943055 AT5G51120_at 6.90831387347977 6.85215810107341 7.44144843136859 7.61657113916089 7.20974047730021 7.3853939847063 6.45905458644347 6.9697373788573 6.38198755959975 6.08762669966998 7.41630990552901 7.44046978815825 7.19413293924635 7.51146892995596 7.5993347900478 7.29941933509205 6.81691260364963 6.89463103226916 6.0317243445818 0.208597061487893 0.199751382210538 0.206617459940513 0.208817455128955 0.206096303700711 0.215993588590323 0.199751382210538 0.200446410546443 0.209490017403836 0.209986196342328 0.202564545706927 0.206525738911725 0.200201077710654 0.20715370510055 0.202563799301991 0.221509330475471 0.223674761904983 0.206662226212876 0.210794276074713 5 5|0 +|/ 20797098 20798292 20797864.111 20796906 20798756 + gene protein_coding_gene TRUE TRUE AT5G51120.1 ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding Encodes a homolog of the protein PABN1, a polyadenylation factor subunit. similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.860222285356762 8.6109013250234 4.20376161417175e-06 0.000136220700462545 12.7715099944773 13.8246511382708 0.860222285356762 0.0987280273674744 AT5G61590_at 11.7897962660980 11.8838573938780 12.0999029386675 12.0741569452802 12.5840672405201 12.5679557605652 10.6878471373837 10.797396335434 11.1158749840816 10.9967038465765 11.5715794497460 11.5405148523970 11.7140858099988 11.6595794777132 10.6810164006122 11.4114615772254 11.4466960344307 11.2646340512752 11.0701087495210 0.085500747495189 0.0827386628755883 0.0837925971457354 0.0863171641713366 0.0850182798979187 0.088877183669374 0.0837213063142498 0.0910850335325427 0.108529020913390 0.0831905679264374 0.0850060100539845 0.0833959966761822 0.0862061227397422 0.084056318941466 0.0900076152959702 0.0850545037591833 0.0849036406056673 0.0864788575396436 0.0841459952568245 5 5 - 24781882 24782403 24782156.727 24781664 24782550 - gene protein_coding_gene TRUE TRUE AT5G61590.1 AP2 domain-containing transcription factor family protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07580.1); similar to AP2 transcription factor [Sisymbrium irio] (GB:AAR15436.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.696048267337463 8.60599873373227 4.22623515360702e-06 0.000136846666744802 12.7664682445186 23.0466684105956 0.696048267337463 0.0255341898510007 AT5G26710_at 9.25103587193274 9.337873911453 9.85275843505212 9.85738274551995 9.82389371611704 9.81601143129319 9.25841106707608 9.10164352257762 8.71219258142488 9.02800185936317 9.7643386759591 9.95699461170638 9.351636579405 9.61553966227117 9.81376869953728 9.72014102642836 9.71633775939223 9.51083437564209 8.8915097066534 0.106952851166430 0.106285131455264 0.112317703122996 0.108897118450016 0.111160840981851 0.113192894741854 0.112630367771733 0.109000425484523 0.132138379694905 0.112021817369850 0.107109245027641 0.105780228835056 0.112393953785254 0.109375422221453 0.110060224078683 0.106474332350739 0.112918692546072 0.111650583323310 0.112605072422258 5 5 + 9307578 9308200 9307818.091 9305516 9308443 + gene protein_coding_gene TRUE TRUE AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative similar to OVA9 (OVULE ABORTION 9), glutamine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G25350.1); similar to putative tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:AAN08648.1); similar to Os10g0369000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064451.1); similar to Glutamyl-tRNA synthetase archae/euk cytosolic; Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABE81799.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain Ribosomal protein L25-like; (InterPro:IPR011035); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutamyl-tRNA synthetase archae/euk cytosolic; (InterPro:IPR004526); contains InterPro domain Glutamyl-tRNA synthetase, class Ic; (InterPro:IPR000924) 0.702117348357298 8.60373337663646 4.236663478602e-06 0.000137081962428997 12.7641376435717 18.8165931574310 0.702117348357298 0.0310537530414822 AT5G22650_at 8.96722214088935 8.96147004223132 9.77321554586565 9.70437273838595 9.39328598543937 9.31490056202644 9.41630140251656 9.21147056808342 7.4834755842995 8.25508905126302 8.70039237413244 9.28542714276443 9.15716742072422 8.64429128851456 9.24877208024 8.8879200105059 9.48132537287739 8.88110233922335 8.30690451026456 0.156910358580139 0.159530138353597 0.159317932356190 0.159289804664213 0.161888506350811 0.160741920341523 0.158004535857895 0.165427977814122 0.201959633319426 0.170034409743113 0.167327250629762 0.156910358580139 0.157067894910863 0.170983624372896 0.16229654206302 0.163878679629353 0.163236345717460 0.162097107117284 0.167020373842644 5 0|5 /|+ 7535105 7535851 7535637.875 7534020 7536276 + gene protein_coding_gene TRUE TRUE AT5G22650.1|AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B) Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Identical to Histone deacetylase 2b (HD-tuins protein 2) (HD2B) [Arabidopsis Thaliana] (GB:Q56WH4;GB:O49209;GB:Q9FNJ6); similar to HD2A (HISTONE DEACETYLASE 2A), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G44750.1); similar to histone deacetylase HDAC2 [Triticum aestivum] (GB:ABG43091.1) 0.713985520589808 8.59936581287487 4.25684778572688e-06 0.000137539312428002 12.7596426089291 17.8682579409623 0.713985520589808 0.0397921745397424 AT5G11710_at 8.1253466343206 8.30450982607794 8.77393911758791 9.06074784886103 9.29673510732393 8.86177925858721 8.6192967605583 8.45468068135828 8.46152550315425 8.08748828343714 9.58407553341778 9.48865725099907 9.41958731108825 9.20494119533634 9.44274267273658 9.2231264072993 8.88413257042208 9.11064515788156 8.03274923218992 0.120815056686888 0.117833215318018 0.120503747888923 0.11706924965242 0.120462831413806 0.130320635171175 0.119511659803816 0.121432933510342 0.123338710216448 0.128500816049218 0.119408446749625 0.119037380232151 0.118603229669829 0.117561456647035 0.127554802361034 0.118316128963930 0.127099975270836 0.120021419300373 0.119611668742929 5 5|0 +|/ 3775495 3776250 3775818.6 3772819 3776663 + gene protein_coding_gene TRUE TRUE AT5G11710.1 (EPSIN1); binding EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues. similar to binding [Arabidopsis thaliana] (TAIR:AT2G43160.4); similar to Os04g0599900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053755.1); similar to Af10-protein [Avena fatua] (GB:AAB68030.1); similar to Os01g0738600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044190.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) 0.861579681824213 8.5993021340095 4.25714284069454e-06 0.000137539312428002 12.7595770551562 17.4314591636634 0.861579681824213 0.0995092519150661 AT5G39730_at 9.29632302089334 9.40885698628643 10.2599073285977 10.3639249992733 10.2318000342332 9.80377015007331 9.80340766617804 9.70617259883973 8.48340857894353 8.93016538364004 9.51910763946227 9.4175354804341 9.69221936923632 9.70719861515534 9.48218000449087 9.84153595874492 9.59979856555348 9.79374703247872 8.49437093432272 0.148342027356052 0.138845099432421 0.140453504140165 0.135916080882951 0.136238516279822 0.141086770821568 0.134030648730122 0.141470924006742 0.147684266534422 0.140213703171148 0.142170150725162 0.140198168229271 0.134332109185713 0.138830219470371 0.133918721070158 0.135987216395622 0.135581202866229 0.135157277859048 0.149623534934680 5 5|0 +|/ 15919013 15919819 15919415.9 15918907 15920098 + gene protein_coding_gene TRUE TRUE AT5G39730.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related [Arabidopsis thaliana] (TAIR:AT5G39720.1); similar to Os06g0702700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058493.1); similar to Os02g0141000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045856.1); similar to hypothetical protein CHGG_02445 [Chaetomium globosum CBS 148.51] (GB:XP_001228961.1); contains InterPro domain AIG2-like; (InterPro:IPR009288) 0.803422130443697 8.59280970508741 4.2873419022085e-06 0.000138411841973783 12.7528909952873 18.9930938307952 0.803422130443697 0.0804560537102294 AT5G15920_at 4.17398050426193 4.40037373400108 4.87894693595480 5.11895575714536 4.95702145316749 5.04686566146592 3.81901324289695 4.17513353731852 3.08896089272825 3.32054894466947 4.02294646619528 4.40823721612378 4.62934181697494 3.59064702399786 3.97316551538366 4.67817440752566 3.74105985398561 4.03484415824464 3.66446890016629 0.262463628883387 0.252042152549724 0.265240081414721 0.261599942815641 0.25346248221787 0.273435535396776 0.25147772926589 0.259794170989727 0.257754734546858 0.255294475309335 0.25147772926589 0.253175331451354 0.254286492590754 0.253909289400049 0.259048722441240 0.255650867591015 0.274202490127345 0.268470520537229 0.25147772926589 5 5|0 +|/ 5198845 5199462 5199124.9 5195686 5199562 + gene protein_coding_gene TRUE TRUE AT5G15920.1 structural maintenance of chromosomes (SMC) family protein (MSS2) similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC), ATP binding [Arabidopsis thaliana] (TAIR:AT5G61460.1); similar to Os05g0596600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056521.1); similar to Structural maintenance of chromosome protein SMC, C-terminal [Medicago truncatula] (GB:ABE93633.1); similar to SMC5 protein [Oryza sativa] (GB:CAD59412.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395) 0.81756567104818 8.59185337012593 4.29180978361541e-06 0.000138432257202931 12.7519057244309 8.31768383818914 0.81756567104818 0.0854392054774292 AT5G54300_at 4.99671215401963 5.05671073826794 5.68579089357332 5.79832347481798 6.92087490115059 6.51977423538012 6.78198736585578 6.4619795643973 5.33958844401057 6.07810587812938 7.53972350740062 7.05449787248811 6.64277011621822 6.9865580557474 6.50227609772717 6.9013263513122 7.1721931760694 6.87008555716653 5.66521387492049 0.203798724946254 0.204628437663736 0.189583369481021 0.185367445314572 0.188847978214972 0.198366306229097 0.194219037426964 0.191504952095063 0.198435674596847 0.187695699607582 0.185367445314572 0.185367445314572 0.187709565342092 0.187226665868285 0.19443729643928 0.198166072662172 0.193113159778921 0.201739402325784 0.203546965274935 5 5 - 22071593 22072137 22071816.182 22071195 22072656 - gene protein_coding_gene TRUE TRUE AT5G54300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61260.1); similar to Protein of unknown function DUF761, plant [Medicago truncatula] (GB:ABE84235.1); contains InterPro domain Protein of unknown function DUF761, plant; (InterPro:IPR008480) 0.835609765004033 8.591308001876 4.29435993443809e-06 0.000138432257202931 12.7513438073158 12.3542599529927 0.835609765004033 0.0914983309535222 AT5G02240_at 10.6716396600358 10.5748604875628 11.3863111430933 11.2983931424058 11.4631083024253 11.1235496493441 10.9664846283152 10.9299423999975 10.2781716573930 10.9061316752425 11.5496966084284 11.423441861594 11.2721977536462 11.5081119135612 11.4697619829984 11.2668935641786 11.3919384302444 11.5321653049625 10.1384221961819 0.0829102155328078 0.0822543630865108 0.0866356409411582 0.083687964855288 0.0825531254147335 0.0855160509904769 0.0829724809973459 0.0833599044990124 0.094202059407305 0.0817586580352567 0.0839204734747303 0.0821189707776276 0.0834396066066816 0.0850549400924527 0.0859457156339573 0.0816659293477746 0.0844966121649419 0.0834928636709235 0.0832605421099013 5 5 + 451833 452937 452403.273 451421 453155 + gene protein_coding_gene TRUE TRUE AT5G02240.1 catalytic/ coenzyme binding Identical to Protein At5g02240 [Arabidopsis Thaliana] (GB:Q94EG6;GB:Q9LZK8); similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT2G37660.1); similar to Os05g0110300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054439.1); similar to Os03g0822200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051733.1); similar to similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera watsonii WH 8501] (GB:ZP_00516553.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.758988091592596 8.58886933209951 4.30578327534814e-06 0.000138598129546048 12.7488307144047 21.9856283951762 0.758988091592596 0.06328483803873 AT5G04830_at 9.70147022274796 9.85445560049738 10.7260398128814 10.7658496304502 10.8792952236498 10.5120813959024 10.0398303091257 10.0635024336645 9.54725622961847 9.6351730707629 10.3509831890181 9.95490004923034 10.3712654726475 10.5142338997686 9.76165842082955 10.3681956102089 10.3113737275204 10.4363745869369 9.37034177449524 0.105720498545735 0.099336153388008 0.102899757421057 0.102992360319690 0.106260804095989 0.102813062650010 0.111276661862033 0.101676756597522 0.113380966912550 0.103852962589775 0.0987006234234655 0.098769996381312 0.0993961652488446 0.099427357680761 0.0997803821163498 0.101372649450116 0.112694850377219 0.0990080116811012 0.111569727289989 5 5|0 -|/ 1402295 1403646 1402846.667 1402046 1403962 - gene protein_coding_gene TRUE TRUE AT5G04830.1|AT5G04830.2 similar to hypothetical protein AN2221.2 [Asper (GB:XP_659825.1); similar to Os01g0965900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045497.1); contains domain NTF2-like (SSF54427) 0.773517317719967 8.58884469688921 4.30589884052425e-06 0.000138598129546048 12.7488053238494 20.2059223175210 0.773517317719967 0.0693074124544414 AT5G20500_at 10.7269013976792 10.6325650971013 11.0981813818441 11.2258497212855 10.9515621793216 10.7985951587016 10.2252280722588 10.1331298446584 9.92023169215567 9.99819679053585 11.1192429272597 11.0975845833370 10.6608295813176 10.8170910470211 11.1278582856094 10.6497230480870 10.3116965137976 10.6842014477948 9.9819106285515 0.086484148897719 0.0813440495047461 0.0810343495119308 0.081909127922111 0.083753901473097 0.0830480021848528 0.0842634609635513 0.0829616803747068 0.0888338714778486 0.0830218367145604 0.0810343495119308 0.0810343495119308 0.0810343495119308 0.0822734021362161 0.0846296459253552 0.0810343495119308 0.0854151359485002 0.0883845441282621 0.0832674395124585 5 5|0 +|/ 6938667 6939609 6939002.5 6938600 6939850 + gene protein_coding_gene TRUE TRUE AT5G20500.1 glutaredoxin, putative Identical to Glutaredoxin-C4 precursor (AtGrxC4) (GRXC4) [Arabidopsis Thaliana] (GB:Q8LFQ6;GB:Q9M457); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT1G77370.1); similar to glutaredoxin [Populus tremula x Populus tremuloides] (GB:AAL90750.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.715419866447069 8.58702613450765 4.314439098699e-06 0.000138770001563391 12.7469308071819 21.1116556731192 0.715419866447069 0.0413450501310336 AT5G43130_at 7.85004344204895 8.05113114534922 9.08780275887682 8.86941401257463 9.67344845419724 9.1840874629966 8.15986172063097 8.06690567962963 7.86749491592954 7.99923312144534 8.95329196159553 8.6338298047655 8.71561996081882 8.7567869335754 8.37933807623702 9.09685095904214 8.47203210971973 8.23913313481265 8.43805828554105 0.180421566547869 0.190601686576421 0.18029716623105 0.184196490259442 0.191778316604727 0.180610361776051 0.178557420797416 0.177639600375771 0.190546585814967 0.184704118442539 0.179317947517981 0.180179264033455 0.177639600375771 0.177639600375771 0.182096674231366 0.177639600375771 0.182738462493613 0.186161026805293 0.186927812273134 5 0|5 /|- 17332848 17333859 17333255.222 17332677 17338391 - gene protein_coding_gene TRUE TRUE AT5G43130.1 transcription initiation factor similar to transcription initiation factor [Arabidopsis thaliana] (TAIR:AT1G27720.1); similar to Transcription initiation factor TFIID component TAF4 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96848.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription initiation factor TFIID component TAF4; (InterPro:IPR007900) 0.862983800922749 8.58623891956687 4.31814166965306e-06 0.000138786134310789 12.7461192515397 16.9965647388094 0.862983800922749 0.100348565859100 AT5G50130_at 4.76312725449944 5.10139829007998 5.8403492713775 5.99382269157489 7.09589312635914 6.18017612052058 4.46609693339246 4.35410860365402 3.6730174912252 3.60717138446242 3.87093860939053 3.97895903858779 4.78278765751368 4.72141519113457 4.35915293749512 4.08733053629608 4.71986286226533 3.88996142924856 3.63311368980753 0.253230673609205 0.246697312470475 0.264973655150895 0.254761992555840 0.254430272044642 0.270097384067724 0.258083117650075 0.260872441555638 0.253756501058306 0.266966002874514 0.246697312470475 0.255205288969217 0.250853237741230 0.269670066749162 0.254537392079011 0.252051323034333 0.298485364236459 0.250280801113497 0.255121482437749 5 5|0 +|/ 20409226 20410240 20409749.875 20407223 20410489 + gene protein_coding_gene TRUE TRUE AT5G50130.1|AT5G50130.2 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT4G24050.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE79697.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.13495552148065 8.58124867143647 4.34169285302605e-06 0.000139439709890525 12.7409730269191 9.44390581371884 1.13495552148065 0.172105486801613 AT5G59160_at 9.43705424532367 9.6207068029775 10.2318690981031 10.3682161618102 10.6768760418589 10.2668202401528 9.85125563626023 9.7497071077349 9.28943653596484 9.08186674285929 10.1693634142150 10.1047767659395 10.0367317974471 10.0552589320043 9.89653703730315 9.97110097634686 9.89099508778075 10.0005585238487 8.98636887750748 0.107724788653852 0.102949591006768 0.105482200205411 0.104077226819729 0.104558972152616 0.108322576364509 0.105409918712431 0.105190465024484 0.118717010019867 0.105877407335625 0.104166826762607 0.102709540135701 0.102709540135701 0.106769988391192 0.103540786768793 0.102750258592006 0.115851352353314 0.104246125725874 0.112205761145058 5 5 + 23897788 23898293 23897987.909 23896563 23898914 + gene protein_coding_gene TRUE TRUE AT5G59160.1|AT5G59160.2|AT5G59160.3 TOPP2 (Type one serine/threonine protein phosphatase 2); protein serine/threonine phosphatase Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) (TOPP2) [Arabidopsis Thaliana] (GB:P48482;GB:Q94B57); similar to TOPP5 (Type one serine/threonine protein phosphatase 5), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT3G46820.1); similar to serine/threonine protein phosphatase 1; PP1 [Malus x domestica] (GB:AAD56010.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.80885285107865 8.57009266630228 4.39484732088517e-06 0.000141042366241971 12.7294578359700 19.5927578512633 0.80885285107865 0.0831341074355658 AT5G58700_at 2.67271665548976 2.50208264964471 2.85310366060635 3.49259487575215 3.42914670232636 3.46470771316262 2.47244962223230 2.65150127314421 2.10504127117480 2.61350319966849 3.34214095202349 3.87060220066895 2.90477142264609 3.37118215195426 3.57366597663042 3.2250245075289 3.57263700276585 3.55334744988419 2.22492127581951 0.214420979679524 0.204457987263868 0.20590720992311 0.205243121291471 0.200887427197101 0.212428211087806 0.203072885042313 0.202112849796073 0.206628097664955 0.215396570518726 0.201838523293252 0.207870507605749 0.203727396143296 0.211186012142525 0.206987513058653 0.201119492757632 0.204706315519773 0.205250674066166 0.206489639246758 5 5|0 -|/ 23730373 23731171 23730671.9 23730226 23733324 - gene protein_coding_gene TRUE TRUE AT5G58700.1|AT5G58700.2 phosphoinositide-specific phospholipase C family protein|phosphoinositide phospholipase C similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT5G58690.1); similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to ATPLC2 (PHOSPHOLIPASE C 2), phospholipase C [Arabidopsis thaliana] (TAIR:AT3G08510.2); similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] (GB:CAA65127.1); similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] (GB:CAA72681.1); similar to phospholipase C [Petunia inflata] (GB:ABC50164.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973)|similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to ATPLC2 (PHOSPHOLIPASE C 2), phospholipase C [Arabidopsis thaliana] (TAIR:AT3G08510.2); similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] (GB:CAA65127.1); similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] (GB:CAA72681.1); similar to phospholipase C [Petunia inflata] (GB:ABC50164.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.923691781812978 8.56451163553886 4.42170294289445e-06 0.000141799275990034 12.7236916694089 5.81286791416166 0.923691781812978 0.118815488081963 AT5G12930_at 1.73793535975125 2.19667107744144 4.1528199014645 4.28606511732235 2.31680080076781 3.02379028286352 1.14181119641820 0.987551437146688 1.49441052319742 2.04931333389519 1.1836056700478 2.49516467493874 1.75222031535309 2.16479223274534 1.98321143907989 1.7941824077482 1.74620150975314 2.05483002050701 1.68267077496008 0.212660110259916 0.213589457517799 0.233056457703138 0.226770685875965 0.217640667179528 0.225284659711579 0.231024450707602 0.21261349165459 0.224973820008924 0.230493789255723 0.223849346995281 0.216242606550896 0.219454341328182 0.223196496208944 0.231334668839402 0.215497046179924 0.221247828592699 0.229853771519936 0.22671799066442 5 5 - 4083194 4083906 4083398.273 4082893 4085300 - gene protein_coding_gene TRUE TRUE AT5G12930.1 unknown protein 1.04176062383462 8.5612531634002 4.43746462026668e-06 0.000142199558907845 12.7203234256009 4.29988443554157 1.04176062383462 0.150051760987903 AT5G18400_at 6.74556015352804 6.90935333820013 8.14261762115922 7.65110084283319 8.63341154003383 7.6591568244026 7.05201420262506 6.46584992045024 5.73403898096314 5.8289483138492 7.43152649835907 7.71927674998778 6.99912382200001 7.4077562698206 6.91558603288762 7.10932166861359 7.06929407230323 6.89440904654965 5.75179413016356 0.217623321245042 0.223366727421524 0.217623321245042 0.217623321245042 0.219773011553289 0.221727576290872 0.217623321245042 0.225370332956239 0.232516823289270 0.224541174293438 0.217623321245042 0.217623321245042 0.221433591961517 0.219561706350622 0.226787623481563 0.217623321245042 0.225851148758084 0.224954094443604 0.217623321245042 5 5|0 -|/ 6093092 6094059 6093556.625 6092684 6095055 - gene protein_coding_gene TRUE TRUE AT5G18400.1|AT5G18400.2|AT5G18400.3 similar to Protein of unknown function DUF689 [Medicago truncatula] (GB:ABE78163.1); contains InterPro domain Protein of unknown function DUF689; (InterPro:IPR007785) 1.32503513257312 8.55842503065858 4.45119398512423e-06 0.000142534172749828 12.7173990136414 13.8898233445993 1.32503513257312 0.216226782981197 AT5G09810_at 11.2579368840036 11.5271429520119 11.8237120728754 12.2126441891491 12.0074727985711 11.8071301042757 11.4122162989497 11.7103621088822 11.4882828156382 11.3400513028924 12.7072346754022 12.610466928628 12.7224400949739 12.6950550172624 12.6821902195812 12.4891215775139 12.2620709423327 12.5110259855057 11.1758243217843 0.0682616110437223 0.064964675167461 0.0688357467874557 0.0676902327773503 0.0652611606259225 0.0728426082234057 0.0660517643403546 0.0663709612658879 0.0703371380080902 0.0653000798556006 0.0694964787135872 0.0641081246940138 0.0641081246940138 0.0703464648813046 0.067598855024775 0.0647721916214135 0.0695041435503548 0.06493005411946 0.06609340304351 5 5 + 3053529 3054017 3053783.091 3052098 3054615 + gene protein_coding_gene TRUE TRUE AT5G09810.1 ACT7 (actin 7) Member of Actin gene family.Mutants are defective in germination and root growth. Identical to Actin-7 (Actin-2) (ACT7) [Arabidopsis Thaliana] (GB:P53492;GB:P53495); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.2); similar to actin [Brassica napus] (GB:AAD03741.1); similar to actin [Isatis tinctoria] (GB:AAW63030.1); similar to actin [Malva pusilla] (GB:AAD41039.1); contains InterPro domain Actin; (InterPro:IPR004001); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 0.868028215150518 8.55755560108769 4.45542392464845e-06 0.000142564330775752 12.7164997980235 23.6796622562173 0.868028215150518 0.102784595991495 AT5G53440_at 7.84956948366221 8.06170207550062 8.68400276261248 8.66289175186476 8.93677317779975 8.72141605295162 7.70917472735888 7.79774789854948 8.25081480625663 8.37211008000775 9.09320481589314 9.23272975872903 8.98359571191576 8.99247009941637 8.7714139686174 9.39394229578144 8.98811775028373 8.63887725862671 8.67993730998308 0.146495498954048 0.149084299175500 0.147539155364488 0.147200018033386 0.149737561693385 0.155441237359222 0.151007510083773 0.14779740890767 0.163975068787304 0.144960417488019 0.147841349261820 0.150880634479397 0.145990381304904 0.148736563475893 0.145858907701773 0.148666435605364 0.154080865181995 0.149657954046546 0.149817319137044 5 5 - 21700907 21701428 21701187.909 21700905 21705196 - gene protein_coding_gene TRUE TRUE AT5G53440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to unnamed protein product; gene_id:MYN8.5 pir||T34137 similar to unknown protein-related [Medicago truncatula] (GB:ABE80840.1) 0.737114474349075 8.5552557043478 4.46663434786683e-06 0.000142723486476935 12.7141206826930 17.0259504193660 0.737114474349075 0.0546342670791887 AT5G27740_at 5.9914607799429 6.15103075137977 6.52049125250858 6.43706898901529 7.84025360633934 6.54194529834157 5.83449232356356 5.46290569765413 4.67720910777781 4.91934244548471 6.36667227396239 6.9760945847929 6.58926728093879 6.6590510019873 7.0465895521201 6.73544816576508 6.56567017693264 6.61435662592526 4.92809972857176 0.263332343947542 0.252133751580467 0.252133751580467 0.255916921497416 0.25749847935295 0.252133751580467 0.261452933626607 0.254678362927170 0.276692038320557 0.260476119804810 0.261855455986300 0.256098448868401 0.258709086241137 0.252133751580467 0.259010038481668 0.25332263435119 0.259799846253437 0.264509190629521 0.25322234534093 5 5|0 +|/ 9825258 9826849 9825832.444 9823683 9827068 + gene protein_coding_gene TRUE TRUE AT5G27740.1 nucleoside-triphosphatase/ nucleotide binding similar to EMB1968 (EMBRYO DEFECTIVE 1968), ATPase [Arabidopsis thaliana] (TAIR:AT1G21690.1); similar to Os03g0792600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051525.1); similar to replication factor C 38 kDa subunit [Oryza sativa (japonica cultivar-group)] (GB:BAC76086.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 1.41378033947054 8.55518458842401 4.4669814755648e-06 0.000142723486476935 12.7140471073731 12.1153031548837 1.41378033947054 0.235767716115426 AT5G51880_at 9.26342969763433 9.24760402053211 10.2511314489113 10.0269418505500 10.2361331889180 10.0386752417251 9.56161905649267 9.57477583431656 8.91552842400875 9.12168158279663 9.74363812772587 9.6050934768695 9.7132578030235 9.75301924703444 9.82344798778166 9.81096104793424 9.70224956108366 9.61996888541514 8.9184374032608 0.113599460906537 0.110158291965493 0.116653588669184 0.116691674906318 0.113447462035651 0.114404419461955 0.116432131111219 0.111894796343159 0.123302095768296 0.116899897104903 0.114381465690105 0.112793697253607 0.108882411329548 0.113183717612102 0.108882411329548 0.110860393477843 0.114110564297517 0.113200482613518 0.119113907309877 5 5 + 21107125 21107973 21107537.364 21106647 21108167 + gene protein_coding_gene TRUE TRUE AT5G51880.1 oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15289.1); similar to Os03g0119000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048776.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620) 0.73130099701764 8.55322718096454 4.47654735136889e-06 0.000142923800190029 12.7120217750610 19.1283739526170 0.73130099701764 0.0518223365332795 AT5G48485_at 9.03267374490436 9.23199493802668 8.91052966857402 9.35341525629252 9.62348106417201 9.57785857511105 7.81435368460889 8.36036517142252 8.83943922975511 7.99818570381864 9.85853361917456 10.0246623571376 9.36773432673938 9.18677191444496 9.87083953784747 9.7562643270891 9.29753802588926 9.73411274087123 8.63718485310523 0.131965611675505 0.124627767529427 0.127181467079106 0.125349024024713 0.123217260669295 0.136719788968681 0.150064736563211 0.132921044041841 0.145768809657543 0.147602566385464 0.122769165610251 0.123527170217080 0.126479738456666 0.128365766888476 0.125322320520082 0.122769165610251 0.136520956423290 0.131979733668498 0.128427626246165 5 5 - 19663554 19663812 19663687 19663458 19664028 - gene protein_coding_gene TRUE TRUE AT5G48485.1 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1); lipid binding encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G48490.1); similar to Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor [Medicago truncatula] (GB:ABE79318.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 0.950964050109826 8.55221892181055 4.48148337632649e-06 0.000142976109519698 12.7109783531361 18.0524141970768 0.950964050109826 0.126707043760418 AT5G09620_at 10.2230737905242 10.4627038670339 10.9637986581962 11.0398466858432 11.4123083976934 11.2185088728164 10.6484934472251 10.7171349802702 9.85962352735385 10.1403039203963 10.8184868457105 10.7334018094133 11.0102299859377 10.6537882520355 10.6724273283134 10.8216854028754 10.8208003348771 10.8473488858454 9.89213008845745 0.0648861403971684 0.0658015774171992 0.0657654590415027 0.0683475511248271 0.0638540017012654 0.0663326991824821 0.0682864821842132 0.0714484390308457 0.0744272157626024 0.0677227383919055 0.0682802879487899 0.0648490090216294 0.0652815503939631 0.07417610527026 0.0666593498392239 0.0644114727554309 0.0724262047394047 0.0672022495466044 0.067333253019533 5 5 - 2983764 2984328 2983990.455 2983450 2985436 - gene protein_coding_gene TRUE TRUE AT5G09620.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G64430.1); similar to cticosapeptide/Phox/Bem1p (PB1) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19136.1); similar to Os02g0809100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048461.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.739508029632068 8.54528637972736 4.51558217670677e-06 0.000143958059598830 12.7038008222908 21.2163787296313 0.739508029632068 0.056203026862602 AT5G47730_at 6.19152186798446 5.84636674723114 7.48224699807901 7.64359632733916 7.1464741471816 6.34622025442024 6.16534208700384 5.2132416414205 5.70090406578910 5.07159100496881 7.34224876263917 7.47009269100595 6.53295284387503 6.98683791466197 6.61848723251718 6.19702944893225 6.18870323008492 7.03805337841415 5.34644072697434 0.226032473040412 0.212153908275656 0.212101416386972 0.210986195488932 0.218375589774408 0.217354335655866 0.212002472988438 0.214624416435533 0.240652494845135 0.233615440462049 0.225792830181208 0.210386298454008 0.208857889524979 0.215382657525403 0.217996207819119 0.208857889524979 0.236151174383128 0.217141521697463 0.214085646662256 5 5|0 -|/ 19351858 19352676 19352170.8 19351476 19354327 - gene protein_coding_gene TRUE TRUE AT5G47730.1|AT5G47730.2 SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative similar to SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein [Arabidopsis thaliana] (TAIR:AT1G55840.1); similar to polyphosphoinositide binding protein Ssh1p [Glycine max] (GB:AAB94598.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273)|similar to SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein [Arabidopsis thaliana] (TAIR:AT1G55840.2); similar to polyphosphoinositide binding protein Ssh1p [Glycine max] (GB:AAB94598.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251) 1.36216921718363 8.53830475916808 4.55020634500928e-06 0.00014492208726433 12.6965667959788 12.5892659023377 1.36216921718363 0.225108613658092 AT5G40990_at 1.11365124024655 0.911206899796394 3.45539799422331 3.56321318428084 1.93516796461623 1.22476479512605 0.404360132839292 0.425808263721389 0.554754925982815 0.822883064605896 0.780581777613618 0.505493490700353 0.659584834413736 0.729485640715085 0.87581102717595 0.536231238258232 0.96765060007592 0.75783273417742 0.542614530813936 0.240930389445159 0.233077731041498 0.265424222186883 0.264163814224596 0.237165018713063 0.2365252815001 0.232198709008108 0.233721307510698 0.234498048575247 0.232198709008108 0.233249108650702 0.238231061045975 0.235869581249245 0.232815560997402 0.233833795318044 0.240577296952391 0.235970095673683 0.242485387237651 0.243676899908455 5 5 + 16436879 16437590 16437267.364 16436148 16437628 + gene protein_coding_gene TRUE TRUE AT5G40990.1 GLIP1 (GDSL LIPASE1); carboxylic ester hydrolase Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. similar to GLIP2 (GDSL-motif lipase 2), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT1G53940.1); similar to lipase SIL1 [Brassica rapa subsp. pekinensis] (GB:AAM47031.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087); contains InterPro domain Lipolytic enzyme, G-D-S-L, active site; (InterPro:IPR008265) 0.958689547250554 8.53747207260206 4.55435505334649e-06 0.00014492208726433 12.6957036245130 2.31253035520234 0.958689547250554 0.129240730293658 AT5G12190_at 8.29545862138727 8.26956785762609 8.76827730989011 8.84484188415215 8.94537981134024 8.63471425859229 6.89726693529959 7.67255463314158 6.69929244351791 6.48962873655778 7.4240446574519 7.66268467173116 7.79984310116108 7.65448422401233 7.33030889641442 7.62198686228712 7.92259711830919 7.32602831804472 6.51484875857086 0.227295450455962 0.216767243087918 0.230749632302504 0.219144589056233 0.213011982234984 0.227694683500923 0.218645473564832 0.221919382462115 0.23263266339937 0.22038837079446 0.215347372435137 0.210411617960487 0.210411617960487 0.210411617960487 0.216861848851964 0.215968174679959 0.215901049579409 0.225210133972043 0.215924039175106 5 5 - 3940812 3941064 3940925.182 3940533 3941206 - gene protein_coding_gene TRUE TRUE AT5G12190.1 RNA recognition motif (RRM)-containing protein Identical to Pre-mRNA branch site p14-like protein [Arabidopsis Thaliana] (GB:Q9FMP4); similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G14870.1); similar to RNA-binding re (GB:ABE77687.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.01970761121219 8.5371724815523 4.55584871214183e-06 0.00014492208726433 12.6953930454839 15.371342935958 1.01970761121219 0.145213030528534 AT5G08410_at 10.1682909680901 10.3015638515195 10.6284909994544 10.7007154845530 10.9105339114403 10.5859691451278 10.4751448606536 10.3555337445154 9.64862202692732 9.71741361557132 10.9613953031912 10.6473618772061 10.4405896002630 10.6849170938917 10.8671650956394 10.3802247734412 10.6436938801333 10.9118710262734 9.30086312440643 0.0994977757491777 0.100751243307808 0.103150459058354 0.099720946996568 0.0977320846018755 0.105370249133213 0.0985007051272081 0.101153140467931 0.101840965265434 0.102422494420554 0.0969576852828968 0.0992300627590933 0.0998229745498382 0.0986576627023861 0.100041301573141 0.100130328858283 0.105285229959573 0.100004990998985 0.103547166017577 5 5 - 2710015 2710503 2710322.364 2709849 2710584 - gene protein_coding_gene TRUE TRUE AT5G08410.1 FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2); ferredoxin:thioredoxin reductase similar to FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1), ferredoxin:thioredoxin reductase [Arabidopsis thaliana] (TAIR:AT5G23440.1); similar to Os04g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053378.1); similar to ferredoxin-thioredoxin reductase SU A [Spinacia oleracea] (GB:CAA54407.1); similar to OSJNBa0074L08.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD41197.2); contains InterPro domain Ferredoxin thioredoxin reductase, alpha chain; (InterPro:IPR004207); contains InterPro domain Electron transport accessory protein; (InterPro:IPR008990) 0.758906718951212 8.5330976746013 4.5762170383188e-06 0.000145463283254657 12.6911677445311 20.6396729974475 0.758906718951212 0.065355840084263 AT5G61930_at 5.26974091949256 5.63019555987222 6.6233553957478 6.33143807665712 7.42458170293912 7.19235509737106 5.61783247312937 6.23229141492857 5.17217938740042 5.13143472606346 5.82314469384816 5.74997426008422 6.07490760134096 6.03327248607979 5.52966118764432 6.36155341271681 6.17527399912057 5.66544282281381 5.12010962842314 0.221765294789098 0.216276863301873 0.220259501854952 0.223719934260640 0.216105073122813 0.222868499599473 0.222150951853599 0.216900382727767 0.214005278340760 0.219627420084440 0.218377484056838 0.220705791473591 0.216687434015306 0.227423710631727 0.227429433465606 0.215311572442087 0.218049050554643 0.217867956957215 0.220493451176359 5 5 - 24883461 24884016 24883681.364 24883301 24885047 - gene protein_coding_gene TRUE TRUE AT5G61930.1 APO3 (ACCUMULATION OF PHOTOSYSTEM ONE 3) ACCUMULATION OF PHOTOSYSTEM ONE 3 Identical to APO protein 3, mitochondrial precursor (APO3) [Arabidopsis Thaliana] (GB:Q9FH50;GB:Q94JX7); similar to APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1) [Arabidopsis thaliana] (TAIR:AT1G64810.2); similar to Os07g0600300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060196.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15509.1); contains InterPro domain Protein of unknown function DUF794, plant; (InterPro:IPR008512) 0.995415018491754 8.53063497927148 4.58857482900927e-06 0.000145686593906113 12.6886131517717 11.8241713576431 0.995415018491754 0.139159221505629 AT5G26760_at 7.48821918143406 8.08975975349296 8.6143736171816 8.72118841992621 8.92006022159003 8.80108671061747 7.9481229237707 7.85352690917145 6.855065079845 7.65404421864524 8.1354225537193 8.37507303390474 8.38418616127241 8.22950094446607 8.34289894600015 8.51462499535834 8.20754407096074 7.96576471864246 7.74214978217047 0.202646106458255 0.180008751892070 0.18611510056139 0.190989096573923 0.184129083297472 0.197918167375680 0.187259242066601 0.190383800396370 0.222130570206525 0.190403038686630 0.181908153727685 0.184656541376048 0.180249536587595 0.184680840140961 0.180008751892070 0.184519416166858 0.209450528437532 0.197973963711104 0.184911898120536 5 5 - 9403908 9404694 9404357.182 9403601 9407304 - gene protein_coding_gene TRUE TRUE AT5G26760.1|AT5G26760.2 similar to Os05g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054566.1)|similar to Os05g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054566.1); similar to PREDICTED: similar to Chromosome 1 open reading frame 82 isoform 3 [Pan troglodytes] (GB:XP_513561.2); similar to PREDICTED: similar to Chromosome 1 open reading frame 82 isoform 2 [Pan troglodytes] (GB:XP_001153375.1); contains InterPro domain Protein of unknown function DUF408; (InterPro:IPR007308) 0.885780309090912 8.53035886889522 4.58996259923106e-06 0.000145686593906113 12.6883266938019 16.1477738612784 0.885780309090912 0.108950736531011 AT5G54730_at 7.3180175782928 7.2740758545604 8.521974474023 8.35663945182513 8.39447190416417 8.61190265188796 7.14331794715629 6.54686972701672 7.250568671027 7.64827501734384 7.80814755879442 7.7302447218915 7.9783873939801 7.94886781918541 7.46965167282292 8.25542216917992 8.08022764577364 7.90985475078353 7.58528881590916 0.143862482918214 0.138828367785523 0.149319389383477 0.154156495306491 0.147183363604773 0.148712759844193 0.145544125217417 0.164124833877646 0.161829821202613 0.139720469456888 0.139432469853412 0.143965002398226 0.141352048227079 0.151590263032478 0.147478637416477 0.140968493234733 0.154058847067654 0.137223860727765 0.144751561674176 5 5 - 22251296 22251938 22251604.182 22251015 22254030 - gene protein_coding_gene TRUE TRUE AT5G54730.1 AtATG18f (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) f) similar to AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h) [Arabidopsis thaliana] (TAIR:AT1G54710.1); similar to Os05g0405900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055510.1); similar to Os01g0786900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044475.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85085.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.901783237754971 8.52515126067252 4.61622203607464e-06 0.000146412891519378 12.6829222496445 15.4670643492715 0.901783237754971 0.113781718004061 AT5G37630_at 2.79883031829713 2.6245735711291 3.53777226027817 3.58951904823623 3.21913789308204 3.28644763640732 2.93979928852113 2.86344547477159 2.72207141996702 3.37629260587381 3.83005237507894 4.10162607737583 3.67455628201809 3.62572351736781 4.30038169713287 3.70099379630282 3.71988130323748 3.93746756891546 3.07700552699543 0.235291947087037 0.246057283907293 0.238304623177165 0.240627413227869 0.239481150764193 0.233071704072963 0.237582290528501 0.241109083609514 0.243420992624339 0.239403538135181 0.233071704072963 0.239074637177944 0.233071704072963 0.246625343507306 0.246257090149258 0.236374750344366 0.254768252342056 0.236142322220516 0.23825398664906 5 5 + 14969114 14969654 14969422.9 14964560 14969995 + gene protein_coding_gene TRUE TRUE AT5G37630.1 EMB2656 (EMBRYO DEFECTIVE 2656); binding similar to Os06g0256000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057312.1); similar to chromosome condensation protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46299.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.702217927943888 8.52417312937306 4.62117238924513e-06 0.000146450655731843 12.6819067923804 6.56733660873571 0.702217927943888 0.0360534173935364 AT5G44930_at 4.40211841183126 4.50036779472817 5.78174011170648 5.15629799486814 6.42068354066496 5.56819600578068 4.72179117968787 4.30384533362288 3.27653669305092 4.05192504860369 4.88495863596652 5.09834247067994 4.90965079822383 4.98204983155723 4.5079637279352 5.14370102212851 5.52964911135053 4.52408622077943 3.84582477216711 0.206017758409092 0.191645566051025 0.191949663719298 0.199488937553878 0.198319734412817 0.196918244847214 0.206122124072716 0.201823351428588 0.219792775924627 0.193746887722730 0.192762018095225 0.194072980242259 0.196173139678111 0.19860798955282 0.194887198600353 0.197086234334812 0.220849264730480 0.199624382394196 0.203437106355507 5 5 - 18157863 18158465 18158217.273 18156002 18159374 - gene protein_coding_gene TRUE TRUE AT5G44930.1|AT5G44930.2 ARAD2 (ARABINAN DEFICIENT 2); catalytic Encodes a putative arabinosyltransferase. similar to ARAD1 (ARABINAN DEFICIENT 1), catalytic [Arabidopsis thaliana] (TAIR:AT2G35100.1); similar to Exostosin-like [Medicago truncatula] (GB:ABC75371.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 1.23624339467063 8.5230962923067 4.62662894020888e-06 0.000146450655731843 12.6807887328894 9.44303624591208 1.23624339467063 0.197482936146454 AT5G02810_at 11.0741396480404 10.9697691396577 11.6990591736996 11.5197455839614 12.0691165504267 11.7547496487856 11.1011707057420 10.8216701095271 10.6687257444751 10.6289125339265 11.5583208319805 11.4397796620682 11.5579329465499 11.6230780482397 11.1191478599635 11.5430291033042 11.5145241534211 11.3898640605383 10.6207168726272 0.0687750046959019 0.0640767726076245 0.065204746520576 0.0645735913427343 0.0656729066186912 0.0693305274613389 0.0655549281791031 0.064268759662548 0.07338085775276 0.0651775900160043 0.0640767726076245 0.0646108382676882 0.0640767726076245 0.0640767726076245 0.0673132679882978 0.0642722324205762 0.0708628120398908 0.0711308582566809 0.065239622816885 5 5 - 638318 638959 638720.818 637895 641975 - gene protein_coding_gene TRUE TRUE AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Identical to Two-component response regulator-like APRR7 (Pseudo-response regulator 7) (APRR7) [Arabidopsis Thaliana] (GB:Q93WK5;GB:Q9LZ04); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to Os03g0284100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049760.1); similar to pseudo-response regulator 73 [Oryza sativa (indica cultivar-group)] (GB:BAD38859.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.798869102362543 8.52291544599922 4.62754600861386e-06 0.000146450655731843 12.6806009502576 22.4300082201140 0.798869102362543 0.0811686697770037 AT5G47480_at 7.60268430914414 7.92945298717818 8.69101963640699 8.43842209938558 8.43448765417885 8.49490521879824 6.55474946268045 7.38865114859682 8.43051243152904 8.6426097004442 9.71003614026866 9.57832008227036 9.5252061980212 9.61031421992113 9.30654645098679 9.59192779957073 9.03529268933498 8.99908800110908 8.13185513418116 0.155317357180854 0.154276810903878 0.146024277876810 0.148436043536832 0.148967836605088 0.148846529727032 0.164920712843844 0.162796473247329 0.168036150718665 0.148022080528480 0.144063313515048 0.14807578699251 0.149148961778038 0.149932007812843 0.150657713563325 0.146648196518074 0.150072336936897 0.147709054003829 0.155097056775420 5 5 + 19279521 19280280 19280004.364 19274647 19280651 + gene protein_coding_gene TRUE TRUE AT5G47480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47490.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain RGPR-RELATED (PTHR13402); contains domain SIMILARITY TO UNKNOWN PROTEIN (PTHR13402:SF8) 1.08187826712987 8.51568919840653 4.6643516417783e-06 0.000147507795213039 12.6730944002796 16.8524218327479 1.08187826712987 0.161379907847476 AT5G58060_at 9.67977300496452 10.1138705221701 10.7426426232478 10.8084783654714 10.9926622324914 10.8045427100636 10.1813824782661 10.4450913763133 9.92675652401959 9.70945836675161 10.9521733955300 10.7442172121994 10.8147334590307 10.7368194177335 10.6012730020550 10.7237658340560 10.1957696289057 10.7793081712737 9.62096546427738 0.100426007214069 0.0970108778497436 0.104049662201567 0.101640782459271 0.0992111424100712 0.102826390746636 0.102993088938915 0.09741719199949 0.110975504403246 0.112147596174290 0.097740050167844 0.0970108778497436 0.100480567740085 0.105334843102218 0.097531537178696 0.0970108778497436 0.107242819853594 0.100190574978729 0.106545707655713 5 5|0 +|/ 23515583 23517329 23516198.7 23515365 23517610 + gene protein_coding_gene TRUE TRUE AT5G58060.1 YKT61 (similar to yeast SNARE YKT6 1) member of YKT6 Gene Family Identical to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1) (YKT61) [Arabidopsis Thaliana] (GB:Q9ZRD6); similar to ATYKT62 [Arabidopsis thaliana] (TAIR:AT5G58180.1); similar to NTGP1 [Nicotiana tabacum] (GB:AAD00116.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 0.836583100402586 8.50936172844544 4.69683972035311e-06 0.000148426952682569 12.6665164552940 20.6940058975140 0.836583100402586 0.0944229027958348 AT5G47630_at 4.79177733694013 5.1639630315044 5.64648520852004 5.41381034504681 5.98545050790836 5.6325307764603 5.10971431343788 5.38948627999108 4.20536273944718 4.28845841265898 5.58923011202259 6.09166914327915 5.47540536375525 5.88603118153029 5.56969544568527 5.79371659617145 5.49393857546852 4.89096686219027 4.67805041910538 0.245888830030008 0.239751732689347 0.250781431059923 0.24996022216095 0.240295626451785 0.253978758087398 0.246554605298243 0.248876957955637 0.279149668208863 0.245501606540408 0.252807168754359 0.244130605162947 0.244966800456385 0.245510421603064 0.252155751638981 0.243020515387294 0.252994723487626 0.248131112321119 0.247017662445493 5 5 + 19323627 19324085 19323881.364 19323370 19324320 + gene protein_coding_gene TRUE TRUE AT5G47630.1|AT5G47630.2 acyl carrier family protein / ACP family protein similar to mtACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1), acyl carrier [Arabidopsis thaliana] (TAIR:AT2G44620.1); similar to acyl carrier protein, putative [Brassica oleracea] (GB:ABD64990.1); contains InterPro domain Acyl carrier protein-like; (InterPro:IPR009081); contains InterPro domain Acyl carrier protein (ACP); (InterPro:IPR003231); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) 0.88202088597892 8.4980773261636 4.75538833053433e-06 0.000150167722055847 12.6547736739744 10.3863799835178 0.88202088597892 0.108829849093396 AT5G46840_at 5.94185136648036 6.2522571026064 6.53000796502631 6.61105875247264 7.18074929100462 7.26470621972507 4.95941202417418 5.27012173202437 6.37486276701913 5.76699177905536 6.59943997116253 6.64265060924686 6.6847601419101 6.59281076408838 6.65394087264885 6.48837094843995 6.29622291717763 6.35825315097697 6.61220074898328 0.209869224222750 0.202650334851402 0.219586077164459 0.215906105451337 0.205360880060951 0.221039628829241 0.201533736718548 0.209758281711674 0.205284630748254 0.205494649167758 0.203417174266167 0.199371959076291 0.200721177625393 0.207347135616314 0.204824497011535 0.205485574175546 0.205549123859555 0.209577842218496 0.202957744155095 5 5 + 19024185 19024783 19024502 19022828 19024994 + gene protein_coding_gene TRUE TRUE AT5G46840.1|AT5G46840.2 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G09880.1); similar to RNA-binding re (GB:ABE85138.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G55340.1); similar to Os03g0854300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051937.1); similar to RNA-binding re (GB:ABE85138.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.78946220383649 8.49669558062633 4.762611555439e-06 0.000150286361810723 12.6533347715270 12.6467245251771 0.78946220383649 0.0786419191417555 AT5G40550_at 2.64199411681653 2.52919866404753 3.54081699727236 3.45674543604995 4.06301908411365 3.18027969553189 2.68888154524726 2.56671122570379 2.50762555525316 2.79659140625111 3.96425595087032 4.16439394843728 3.70510335114293 3.95123651525238 4.03299455403701 3.76544150841311 3.22630529727064 3.53019822213631 2.58697675192268 0.227154319206364 0.225699839428942 0.227449267659986 0.22272033410707 0.225117176513162 0.232776943175589 0.233887898381603 0.230097716437424 0.237719495460745 0.235694715618934 0.230032966679664 0.229127548254424 0.226091430269114 0.225049301364556 0.228445731117495 0.225907210665815 0.229588514515280 0.225939117370812 0.229840478657785 5 5|0 +|/ 16259106 16260276 16259768.8 16258296 16260609 + gene protein_coding_gene TRUE TRUE AT5G40550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27460.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA97166.2); similar to Os12g0290600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066601.1); contains InterPro domain Protein of unknown function DUF1325; (InterPro:IPR010750) 1.05780608962877 8.49373059514828 4.77815144436766e-06 0.000150667074231059 12.6502463785640 6.29490038205819 1.05780608962877 0.156128039502724 AT5G35330_at 8.37374336913945 8.46092254947876 9.26876671409235 9.03807911167401 9.89064993017282 9.67476482887078 8.2643673370116 7.241375313508 7.54094688380887 8.27599963176876 9.47313682048976 9.13359652006466 8.99568401403026 8.90895110508098 8.9193588112547 9.1867491808246 9.34658583159522 8.61784377061601 8.46129031173889 0.148931127745912 0.137433127085904 0.145893278793706 0.137433127085904 0.145136111198113 0.144178152979939 0.145941761926345 0.148323736801635 0.162808660107413 0.144772711527524 0.140227460762029 0.137433127085904 0.142291664462908 0.141359318934558 0.146621655900445 0.137433127085904 0.142473433565057 0.145235022632185 0.143946406246824 5 5|0 -|/ 13540979 13542216 13541633 13540705 13543017 - gene protein_coding_gene TRUE TRUE AT5G35330.1|AT5G35330.2 MBD02 (methyl-CpG-binding domain 2); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to MBD12 (METHYL-CPG-BINDING DOMAIN 12) [Arabidopsis thaliana] (TAIR:AT5G35338.2); similar to putative methyl-binding domain protein MBD108 [Zea mays] (GB:AAK40309.1); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 1.18147782577853 8.49141925951031 4.79030352381421e-06 0.000150940484813288 12.6478381232712 17.3593255771685 1.18147782577853 0.185897768303107 AT5G25520_at 7.98479769625149 8.04035340940884 9.13341103782031 9.0692688280506 9.2503951960424 8.98913566187152 8.4005996726483 8.44018843372372 8.4566316547282 8.42922875053809 8.9720225872166 8.78376010144435 8.89620432359112 8.96142304406813 8.8817680045283 8.96216538523027 9.04108036727206 8.91492190741472 8.27212106327276 0.120214918202638 0.114083513857049 0.122562972423749 0.118181176264569 0.114850982995872 0.122206820548862 0.114801892346662 0.121330030590899 0.1253574915684 0.11350172640106 0.112487521155808 0.112487521155808 0.115201258605775 0.114048288424496 0.113407323573559 0.112487521155808 0.121100198237383 0.120540993289515 0.117969927417899 5 5 + 8888921 8889437 8889169 8885091 8889623 + gene protein_coding_gene TRUE TRUE AT5G25520.1|AT5G25520.2 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); similar to Os02g0208600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046260.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921)|similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921) 0.717371135093732 8.47371911705898 4.88448004065799e-06 0.000153684569213558 12.6293748945996 17.3198497609482 0.717371135093732 0.0480283514680118 AT5G02100_at 5.8869598736316 6.2224309165414 6.65164671184731 6.36417060543132 6.77696063440331 6.22522469798207 4.11587049821716 4.35635980224766 3.80422648762817 3.85961849613565 4.57371882199614 4.44392484521978 4.58839631630363 4.65013703324952 4.39416834570611 4.16563196829049 4.87263553407899 4.59204903887622 4.31417319669883 0.266043364150189 0.270586948932781 0.280458909082871 0.275177582313492 0.265526100308617 0.263887899443959 0.265234640435348 0.263887899443959 0.270828079950247 0.265907793209140 0.267204161471980 0.266844402901375 0.265104037624049 0.266127796604482 0.267086915669775 0.267110225973816 0.280564671584469 0.279015945073959 0.264020418276055 5 0|5 /|+ 415352 415989 415646.5 413517 416222 + gene protein_coding_gene TRUE TRUE AT5G02100.1 UNE18 (unfertilized embryo sac 18); oxysterol binding similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT3G09300.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT5G59420.1); similar to Os03g0274000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049701.1); similar to oxysterol-binding protein [Solanum tuberosum] (GB:AAR25799.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain C2; (InterPro:IPR000008) 0.95075270045039 8.4679683921228 4.91550740318732e-06 0.000154548655311397 12.623368287234 10.0888306999307 0.95075270045039 0.129204862814349 AT5G49610_at 4.33187814930408 4.89887331690713 5.56460066564013 5.62326800847144 6.25490339579229 5.60138387832334 4.67271239761038 4.9540829371297 4.41284733921746 4.45065490268902 5.51447299487033 5.98760884113232 5.8055688696828 5.771009127985 5.02064235316915 5.86977662248804 5.63205430122899 5.35316681245196 4.77870068379449 0.225423688502254 0.215632051042170 0.232994170485390 0.228157078621019 0.210937590666468 0.219417096933798 0.217787277674931 0.214460001349281 0.224713607719171 0.229379578203572 0.212925548158404 0.215945574608575 0.21486106945481 0.234192365854438 0.223633599731159 0.215015244040938 0.211223076959048 0.21302424376662 0.226748547127715 5 5 - 20148678 20149249 20148950.545 20148500 20149955 - gene protein_coding_gene TRUE TRUE AT5G49610.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G33530.1); similar to F-box protein interaction domain [Medicago truncatula] (GB:ABE93710.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 1.05926940098070 8.45247096692834 5.00018868869309e-06 0.000157017010333579 12.6071618298665 10.3210570764522 1.05926940098070 0.157772572922401 AT5G01670_at 4.66093839379885 4.42740040503525 6.10201305777637 5.95521796387144 6.20022435272105 5.65811382179838 4.47236957770977 4.43344495810835 4.69589057055251 4.73093408000938 5.30895837752 4.82295888553099 5.05569187060741 5.07996403698273 4.84401679774903 5.73404753524308 5.25177997231243 4.75330832465936 5.13645321290191 0.211342015436106 0.217043014507350 0.222014836675924 0.214420583377123 0.220914493982361 0.232436058578127 0.212320675918457 0.215659066401707 0.218810123479600 0.227943578060415 0.213632426151956 0.216098426159012 0.212478224792678 0.213277984697484 0.221814166436704 0.212252012539024 0.236703348337227 0.223663862032053 0.231143377784117 5 5|0 +|/ 252783 253801 253215 251811 253957 + gene protein_coding_gene TRUE TRUE AT5G01670.1|AT5G01670.2 aldose reductase, putative similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G37770.2); similar to Aldose reductase (AR) (Aldehyde reductase) (GB:P23901); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) 0.866134367983227 8.45227713311603 5.00125778207063e-06 0.000157017010333579 12.6069589479039 10.2190986561342 0.866134367983227 0.105476462047607 AT5G51170_at 4.99399310278441 5.87235379825657 7.1008212574897 6.84119771199661 6.93706537378773 7.27026118321171 5.39063900033155 5.5588473359991 5.03280984995059 5.22609112117542 5.66035541571853 5.49517810651284 6.0313396577621 6.01347593836953 5.39401880768287 6.3572462416462 6.48701019530358 6.37982394731214 5.74076168987098 0.185381164661954 0.184306587226698 0.190956315814944 0.181246028133544 0.193355052428036 0.189243926396359 0.184123532120138 0.199592201742175 0.196023350055081 0.194692055711443 0.187962061936895 0.186658665642210 0.185951495385344 0.181246028133544 0.188460167922317 0.181246028133544 0.193116660649167 0.183900193444566 0.185000369868249 5 5 - 20811195 20811956 20811615.636 20811020 20812625 - gene protein_coding_gene TRUE TRUE AT5G51170.1|AT5G51170.2 similar to Os02g0651000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047590.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26563.1); contains domain FAMILY NOT NAMED (PTHR13522); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 (Hypothetical pro (PTHR13522:SF1)|similar to unnamed protein product [Homo sapiens] (GB:BAB14469.1); similar to hypothetical protein LOC79650 [Homo sapiens] (GB:NP_078874.2); similar to Os02g0651000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047590.1); contains domain FAMILY NOT NAMED (PTHR13522); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 (Hypothetical pro (PTHR13522:SF1) 1.11373161203401 8.4504319023533 5.01144757384614e-06 0.000157121665985270 12.6050273591165 11.9009108083759 1.11373161203401 0.171161070019164 AT5G63800_at 11.3187261790252 11.3478325643025 12.4746663128833 12.379862301848 12.5074578152233 12.4495747818524 12.0367371043792 11.7736507014934 11.7256294123457 11.7911358146675 12.3939776151854 12.0673372859582 12.4573709038892 12.4264245662872 11.9873132322364 12.3176799901702 12.4959340220818 12.3407616807807 11.6061979192686 0.06971249379019 0.0647145847364936 0.0662665656211453 0.0687184496074511 0.0672169582851336 0.0685810653208625 0.0699944213488334 0.0652754982420323 0.071497147893081 0.0659686073883132 0.068039424156687 0.0665188637283845 0.0641465402724389 0.0692396853550942 0.0683349610057624 0.0655788254520915 0.070734485475514 0.069139087091761 0.0643497233270809 5 5|0 +|/ 25552032 25552869 25552508.667 25547281 25553075 + gene protein_coding_gene TRUE TRUE AT5G63800.1 BGAL6 (beta-galactosidase 6); beta-galactosidase member of Glycoside Hydrolase Family 35 similar to BGAL11 (beta-galactosidase 11), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G35010.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT1G77410.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79804.1); similar to beta-galactosidase [Gossypium hirsutum] (GB:AAS76480.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79284.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.71842459781568 8.45036109772778 5.01183902064613e-06 0.000157121665985270 12.6049532327546 24.0453156172097 0.71842459781568 0.049675998557236 AT5G19960_at 5.78298324735095 5.535008576983 6.52988408356276 6.40922735050842 6.53179134471872 6.52965851680127 4.86053473633438 5.16320771663488 4.82594257149413 4.63467987504227 5.32594002346718 5.25025475769235 5.17572301489345 5.19255335524149 4.91205982554688 5.03239977404843 5.54696036804026 4.98773137364188 4.9810512844299 0.183077072917602 0.183077072917602 0.193834463911616 0.186970319203896 0.187552890788814 0.194615471310949 0.189761226709018 0.186071360304312 0.185609324853327 0.186369062894526 0.185223242802582 0.184531234182791 0.183244471254871 0.18607870269478 0.186727117668711 0.186942408271968 0.188552040321255 0.192438812562876 0.18685285376484 5 5|0 +|/ 6744791 6746109 6745467.778 6743928 6746341 + gene protein_coding_gene TRUE TRUE AT5G19960.1 RNA recognition motif (RRM)-containing protein similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.2); similar to cold inducible RNA binding protein [Danio rerio] (GB:CAK04928.1); similar to cold inducible RNA binding protein [Danio rerio] (GB:CAK04927.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.764384161244024 8.44469876876001 5.04325085038173e-06 0.000157992191310723 12.5990233378188 10.9137089742253 0.764384161244024 0.0708605421916923 AT5G16790_at 2.58387723809112 2.29980936665206 2.85247415683104 3.12004679761900 3.45433563971499 3.39405997393777 2.72443418174817 2.56461861000557 2.4862891048988 2.22402039679763 3.11749294931167 3.32334291715885 3.52066433835264 3.138926052547 2.96229602265945 3.23011634094959 2.76473555500417 3.54620369070512 2.25001114520388 0.196156350897174 0.202479667538428 0.206198464415388 0.204956663364892 0.204763034264346 0.205486632138254 0.205470193003518 0.203711127924752 0.213746496155845 0.203921339702053 0.197767200079155 0.196156350897174 0.204250058881878 0.203354636118592 0.204349348526604 0.198945336399471 0.200143093780643 0.204202876353066 0.201707635969753 5 5 - 5522645 5523334 5523083.909 5522499 5523966 - gene protein_coding_gene TRUE TRUE AT5G16790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02950.1); similar to RIKEN cDNA 1500006O09, related [Solanum demissum] (GB:AAT40503.2); contains InterPro domain Protein of unknown function DUF783; (InterPro:IPR008501) 0.771204821968713 8.43996675805956 5.06966514058454e-06 0.000158705012427456 12.5940648074742 5.63449655339305 0.771204821968713 0.0737188181819716 AT5G17990_at 9.95388099445497 9.97341519037579 10.7888076524226 10.7845788196635 9.92949444868228 9.63701734366523 9.47572752456566 9.42682288926749 8.33302929864578 9.07752442865102 9.65348496776291 9.84431136704914 9.12582801560536 9.46986726687977 9.71372864911618 9.55427449709591 9.08877074771691 9.59027313230093 8.51449416107618 0.113683716921501 0.109284717490153 0.10988025685311 0.109315617765106 0.104992837173762 0.1048634769344 0.109355940816367 0.106344426363307 0.139594035468472 0.1048634769344 0.113933580300808 0.108536083369130 0.111625482339152 0.109646700838770 0.108990458764683 0.1048634769344 0.111006968532116 0.108729240351055 0.106700156419154 5 5|0 +|/ 5958782 5959579 5959139.111 5957215 5959907 + gene protein_coding_gene TRUE TRUE AT5G17990.1 TRP1 (TRYPTOPHAN BIOSYNTHESIS 1); anthranilate phosphoribosyltransferase Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. Identical to Anthranilate phosphoribosyltransferase, chloroplast precursor (EC 2.4.2.18) (PAT1) [Arabidopsis Thaliana] (GB:Q02166;GB:Q42557); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93573.1); contains InterPro domain Glycosyl transferase, family 3; (InterPro:IPR000312); contains InterPro domain Anthranilate phosphoribosyl transferase; (InterPro:IPR005940) 0.720448808712831 8.43505933381464 5.09721678853858e-06 0.000159452384046038 12.5889196615962 19.0695930878365 0.720448808712831 0.0514336360365276 AT5G06750_at 7.30421844392643 7.76710162820744 8.3246662639061 8.53807127306941 7.5950405853678 6.62345209866336 4.93226404097656 4.73856899745226 5.62482527058722 4.49176992962148 6.19991049473464 6.07218458837008 5.81346731309977 5.59344710906683 5.3343453586172 5.52705411403202 5.51413461313838 6.01171519516713 4.69550768170774 0.269314396136139 0.280234736795224 0.272513978377668 0.286875109218381 0.269690529291496 0.274092566849090 0.268289966521781 0.271842368069321 0.2779060153064 0.269204577855970 0.266310256945586 0.264564591978395 0.267858614760839 0.282483092865165 0.264647078146935 0.265618644736306 0.277243651956256 0.269231409222985 0.264564591978395 5 5|0 -|/ 2086411 2087236 2086835.4 2086267 2088529 - gene protein_coding_gene TRUE TRUE AT5G06750.1 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT5G66080.1); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G51370.1); similar to OSJNBa0088A01.23 [Oryza sativa (japonica cultivar-group)] (GB:CAD41383.2); similar to protein phosphatase 2c-like protein [Thellun (GB:AAM19705.1); similar to Os02g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047766.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.20284199929189 8.43223139659759 5.11316715990579e-06 0.000159836025662052 12.5859534378327 12.3257479042380 1.20284199929189 0.192806855822974 AT5G41770_at 6.17613848606343 6.48342273781172 7.27394062421168 7.47209068396076 7.58079266373776 6.81187191224391 6.68589716580359 6.55580334691485 4.82810093960659 5.45628421739706 6.22753188029153 6.88982368152995 6.32758275432877 6.71712733150798 6.4120454191306 7.02543795577934 6.58936530949318 6.19653542266495 5.65594091387374 0.224300481721593 0.220510259287889 0.227599134331101 0.219437066031774 0.222151455599093 0.232426847747182 0.214849134303170 0.214849134303170 0.23071307964806 0.219482606305865 0.219516155561174 0.215207685509316 0.225293627424216 0.228382878818456 0.221013648154274 0.217298055307856 0.220174677148578 0.217763219451966 0.223758144670071 5 5|0 +|/ 16737315 16737914 16737719.444 16735224 16738450 + gene protein_coding_gene TRUE TRUE AT5G41770.1 crooked neck protein, putative / cell cycle protein, putative similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT3G51110.1); similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT3G13210.1); similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT5G45990.1); similar to hypothetical protein LOC393920 [Danio rerio] (GB:NP_957240.1); similar to PREDICTED: similar to crooked neck protein isoform 1 [Canis familiaris] (GB:XP_534328.2); similar to PREDICTED: similar to Crooked neck-like protein 1 (Crooked neck homolog) (hCrn) [Bos taurus] (GB:XP_604909.2); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.02204886630256 8.43146741942709 5.11748546803322e-06 0.000159855761747546 12.5851519392022 12.8108063240768 1.02204886630256 0.149053277015797 AT5G62220_at 6.09703413056374 6.44196474022694 7.02676247777581 7.39606158130927 7.98026394986328 7.949812213909 8.446524133119 8.72225835432083 8.57752446757172 7.63272276805448 10.1664843398847 9.89436698563315 9.61082030422669 9.72865793159847 10.1875788881278 9.55538819985832 8.7929033083661 9.41529409872982 8.2076706305472 0.1402283805693 0.160906515669766 0.144092673011702 0.151125885581111 0.137286309912960 0.142952798892194 0.139847798346094 0.137488678649324 0.143268221109795 0.153644954530471 0.146485591925958 0.142277794216493 0.141164422100352 0.149217335121230 0.146575244504288 0.140051576722705 0.143521671226937 0.138944435368600 0.145024171861887 5 5 - 25005775 25006220 25006048.545 25005682 25007235 - gene protein_coding_gene TRUE TRUE AT5G62220.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G13990.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE79352.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.84545525890936 8.43042219789632 5.12339987642693e-06 0.000159925291175506 12.5840552711122 16.4117065538581 0.84545525890936 0.0997605160582114 AT5G12340_at 1.77833174949945 2.25464428535456 4.37554406852239 4.97883886931918 1.62948807166215 1.70565465492426 0.742409186146915 0.732180903074063 0.571070933955893 0.450194726626932 0.31124153152617 0.486768094323732 0.712953166761636 1.22239461444612 0.755358412251968 0.812081263499609 1.12734847164366 0.805641874760395 0.927392289604334 0.227633992422425 0.222869652837000 0.246130650207680 0.241812300119193 0.223073478027217 0.246051988241631 0.232060191376527 0.222869652837000 0.232479386009739 0.231118873972901 0.226804248032087 0.222869652837000 0.229619680932911 0.222869652837000 0.229958417802794 0.232070220075108 0.238016897290392 0.22606953078992 0.227649130060021 5 5 - 3993014 3993449 3993266 3992949 3993611 - gene protein_coding_gene TRUE TRUE AT5G12340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28190.1); similar to putative protein [Medicago truncatula] (GB:ABE89838.1) 0.962580331838761 8.42585438485905 5.14933386509102e-06 0.000160619175794953 12.5792611046152 2.98902451291990 0.962580331838761 0.133683379714911 AT5G14370_at 6.8356021869104 6.71995445898678 7.15526805879681 6.91985286653147 7.94144369977319 7.56507395667971 6.84888249390441 6.57688737382959 6.14847212397783 6.02722157128712 6.85830351118169 7.49594045984042 6.73386272532817 7.29823503216212 7.22836011392361 7.46590331710383 6.63218697005632 7.00188889556564 6.11802323840739 0.178614724040950 0.182480323710381 0.188490712297256 0.177105976954173 0.189806949146036 0.177998769371206 0.185663818421278 0.185474815581007 0.204029649860734 0.187276733578871 0.181072436751188 0.177304993028821 0.183221166093406 0.185314236074317 0.183888848203783 0.180168956703516 0.190820113465701 0.178051393864329 0.198190706142982 5 5|0 -|/ 4632395 4633189 4632909.4 4631894 4633716 - gene protein_coding_gene TRUE TRUE AT5G14370.1 similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to CCT [Medicago truncatula] (GB:ABE93500.1); contains InterPro domain CCT; (InterPro:IPR010402) 0.82075375031264 8.41403110791959 5.21712304057887e-06 0.000162616680529484 12.5668404211207 13.6639910232779 0.82075375031264 0.0922935159293082 AT5G44190_at 10.3222618208222 10.2634201990984 11.3246019893641 11.3116489528 11.7909153953824 11.641388838468 11.0937231875940 11.2767407734062 10.9909195902459 10.8865967903033 11.6114337072356 11.4252517894730 11.7828545784103 11.6827131545381 11.1201848877144 11.5723223214056 11.3941338506178 11.4790369089625 10.7699603423928 0.0739945498045139 0.0723505676399051 0.0698832433106309 0.0724405874290982 0.0695047181302999 0.0720689653079634 0.0727076136886443 0.0723541093047232 0.0761588530558887 0.0698120673119314 0.0689642883333561 0.0685727241646549 0.0690409896997684 0.0685727241646549 0.0713600867174685 0.0685727241646549 0.0734566263023088 0.0727837153399204 0.071511572636063 5 5 + 17816606 17817795 17817147.273 17815596 17818051 + gene protein_coding_gene TRUE TRUE AT5G44190.1 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1. Transactivates transcription in yeast, similar to the yeast Golden2 transcription factor that is required for photosynthetic differentiation. similar to GPRI1 (GOLDEN2-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G20570.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE89013.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.702050728793721 8.41008579356106 5.23995798766174e-06 0.000163211107607395 12.5626920579380 22.3235794650046 0.702050728793721 0.0422068034151922 AT5G13640_at 9.179490495529 9.01183208928717 10.0212818457376 10.030158698167 10.2821864653220 10.0279019214047 9.66255609820032 9.67099708739166 9.37088960731308 9.52975125896498 10.3448590833809 10.0821741629134 10.2457044057284 10.3644699187417 9.9217748846171 10.4353667135410 10.0452472905493 10.2409757046959 9.53326352784871 0.120051748952054 0.120295755218595 0.120544310240521 0.118814899363051 0.115907716431355 0.123499107986651 0.120486823246774 0.118518226244610 0.122014791119074 0.122631714592145 0.11876072650171 0.119978346314856 0.120497579389373 0.128999765888835 0.126846633946028 0.115907716431355 0.121925712107574 0.119294962504069 0.127510740606780 5 5 + 4396402 4397189 4396927.182 4393065 4397544 + gene protein_coding_gene TRUE TRUE AT5G13640.1 ATPDAT (Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase); phosphatidylcholine-sterol O-acyltransferase arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT) similar to lecithin:cholesterol acyltransferase family protein / LACT family protein [Arabidopsis thaliana] (TAIR:AT3G44830.1); similar to lecithine cholesterol acyltransferase-like protein [Medicago truncatula] (GB:AAP47635.1); similar to hypothetical protein [Ipomoea trifida] (GB:BAF36362.1); similar to putative phosphatidylcholine-sterol acyltransferase [Ipomoea trifida] (GB:AAS79590.1); contains InterPro domain Lecithin:cholesterol acyltransferase; (InterPro:IPR003386) 0.72063333960057 8.4073542199486 5.25583130605967e-06 0.000163537306765116 12.5598188160981 19.5798204135782 0.72063333960057 0.0527518814228836 AT5G17840_at 8.18053264138643 8.21014210724872 8.40454546100057 8.36257188503512 8.60564970925045 8.69936618719971 7.84974962160806 8.00281230644774 7.30789212782287 7.6484656263658 8.66904564252631 8.35829747860836 8.23606418378696 8.25771612091918 8.53609334660428 8.23768081947361 8.23990550178616 8.30991516062438 7.3564560242184 0.119567981590245 0.108945572024725 0.113521345062757 0.110519845694613 0.113832166599058 0.122816236653620 0.118533500955860 0.118070385219328 0.132348366414201 0.130025069711237 0.121214717823095 0.116400464400434 0.119220938197628 0.125533341545747 0.117106302139944 0.121353639065386 0.119102166044229 0.116237825796831 0.119597219271213 5 5|0 -|/ 5895882 5897033 5896409.3 5895678 5897152 - gene protein_coding_gene TRUE TRUE AT5G17840.1 chaperone protein dnaJ-related similar to hypothetical protein MtrDRAFT_AC137986g14v1 [Medicago truncatula] (GB:ABE92416.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.687604665218765 8.40698609666408 5.25797446461772e-06 0.000163537306765116 12.5594315328137 16.1860184271939 0.687604665218765 0.0323058645141881 AT5G03280_at 8.26843450570357 8.50391042981427 8.70279618755968 8.92743903541172 9.24414651315777 8.86517701536389 7.79878303995962 7.97021374345356 7.375855428868 7.60809662242236 8.6980025724462 8.62344451489858 8.46284749109336 8.40730465845488 8.26018195824192 8.64881794245848 7.91920309177466 8.10406468186194 7.68405457508331 0.154753804955326 0.139574650812036 0.1492601820682 0.138981346463807 0.14464041702927 0.161949173927671 0.144866724074456 0.141960559416867 0.144990059286242 0.138641173673096 0.141013344456848 0.143113925979257 0.142845659913462 0.145579831301389 0.140510158248795 0.138641173673096 0.153501277832385 0.156873124445612 0.158191289516641 5 5|0 +|/ 792440 792840 792645.1 787472 793355 + gene protein_coding_gene TRUE TRUE AT5G03280.1 EIN2 (ETHYLENE INSENSITIVE 2); transporter Involved in ethylene signal transduction. Acts downstream of CTR1. Identical to Ethylene-insensitive protein 2 (EIN-2) (AtEIN2) (Cytokinin-resistant protein AtCKR1) (EIN2) [Arabidopsis Thaliana] (GB:Q9S814); similar to NRAMP1 (NRAMP metal ion transporter 1), manganese ion transporter/ metal ion transporter [Arabidopsis thaliana] (TAIR:AT1G80830.1); similar to ethylene signaling protein [Lycopersicon esculentum] (GB:ABD65477.1); similar to ethylene signaling protein [Lycopersicon esculentum] (GB:AAS67011.2); similar to EIN2 [Petunia x hybrida] (GB:AAR08678.1); contains InterPro domain Natural resistance-associated macrophage protein; (InterPro:IPR001046) 0.817017706626517 8.40332494095112 5.27934069878564e-06 0.000164084147337978 12.5555789435172 16.5083553451505 0.817017706626517 0.0913950957194585 AT5G20900_at 10.7743557419798 10.7867529468593 11.3193038078325 11.3034420153663 11.6425634660154 11.2215866894632 10.6026098337197 10.5151020014822 9.79250272024406 9.67055914597884 10.3306289225662 10.2695905176448 10.5968289945688 10.5401498362035 10.4890793717147 10.4772155473073 10.7050957794993 10.7393822707541 9.58105243969317 0.0851888759279905 0.089691824903555 0.0908725885707281 0.0902018545476323 0.0903193804917014 0.0943805339514794 0.0864882669108343 0.0932598094222185 0.0933067167278867 0.0914240420144493 0.0851978453716676 0.0855751996811481 0.0886734678695582 0.0852587710454513 0.0871300618129871 0.086328118964976 0.092566196462267 0.0834241308979694 0.094410427342745 5 5|0 +|/ 7090905 7092152 7091556.1 7090744 7092541 + gene protein_coding_gene TRUE TRUE AT5G20900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G43440.1); similar to ZIM motif family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96481.1); similar to OSJNBa0060D06.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE03550.1); similar to Os04g0653000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054103.1); contains InterPro domain ZIM; (InterPro:IPR010399) 0.769571916693042 8.40036565510638 5.29667952051077e-06 0.000164505120451259 12.552463756132 21.1206484830086 0.769571916693042 0.0744908074910215 AT5G15570_at 3.78576940927128 4.1572958514824 5.3050969448555 5.19965650296829 5.49575107960524 5.04442945878941 4.16155605481112 4.48253268936710 3.73683075249558 3.77533622769611 4.15112473477489 4.52726719618065 4.0968122852743 4.60833998624754 4.32739896682935 4.57848409044394 4.81137608390792 4.39831857435025 3.74949207763729 0.203386596245615 0.193703486248483 0.193308006591644 0.196166050420255 0.197013236330775 0.201267787602914 0.192644548324470 0.198717761328265 0.206232183175916 0.192046346158057 0.196881075875331 0.191950459392225 0.199380238082373 0.191511868030100 0.191511868030100 0.195439100960976 0.203155155941398 0.191511868030100 0.199779363747990 5 5 + 5067501 5067855 5067684.909 5066854 5067999 + gene protein_coding_gene TRUE TRUE AT5G15570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02160.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96923.1); contains InterPro domain Bromodomain transcription factor; (InterPro:IPR006565); contains InterPro domain Histone-fold; (InterPro:IPR009072) 0.89897444123154 8.39901973956441 5.30458577889106e-06 0.000164632742525697 12.5510465895533 8.79964929507417 0.89897444123154 0.116842888614911 AT5G14790_at 3.49610773911339 4.00600793191077 3.68944622774478 3.41015502292836 4.43873404768992 3.99033550178081 4.18636821662623 4.06475631576023 3.6544231862627 4.09806062178784 5.95217736657439 6.56825807877369 5.27318141708674 5.90717336410989 6.22527832242276 4.96845556307187 4.87427764656937 5.56925430824383 3.43262038033172 0.218519495089379 0.214434358706897 0.221117934024598 0.220112100236982 0.215201936885939 0.218457826604589 0.22631394427259 0.215987130287887 0.230847317941762 0.214680978347090 0.218453551379112 0.219178922536449 0.219554755667923 0.218783894877744 0.223152787867535 0.214434358706897 0.217167892133644 0.218433595612762 0.221316383059392 5 5|0 +|/ 4784987 4785475 4785274.5 4782949 4785808 + gene protein_coding_gene TRUE TRUE AT5G14790.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G01450.1); similar to Os02g0305700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046637.1); similar to Os08g0534900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062351.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD13157.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.9413732973729 8.3979356601041 5.31096322739004e-06 0.000164712767928533 12.5499049632969 8.60805141101964 0.9413732973729 0.128789472936181 AT5G10840_at 8.78455588485295 9.00325374650848 9.3713872984745 9.30624893729651 8.8621551634984 8.72875750664667 8.0814467991897 8.37192372813845 8.27127806765069 7.69075497128401 8.90074714382018 9.52360930175922 8.7146650311752 8.88530462303914 9.18979454653441 8.61666517226822 8.37081711861297 8.892423629541 7.70141143235889 0.137521483269927 0.133997567397725 0.143249944805988 0.136496104915504 0.135218801547221 0.13567053479066 0.139268844069728 0.141006982975498 0.144365611352102 0.141296364035725 0.137873548694452 0.133985534894044 0.135964486680411 0.139818527224790 0.132284682869731 0.131404250721560 0.141977862072199 0.136383878158673 0.141348799391569 5 5 - 3424922 3425477 3425177.455 3424689 3427879 - gene protein_coding_gene TRUE TRUE AT5G10840.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT5G25100.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G24170.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT3G13772.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10383.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD54580.1); similar to Nonaspanin (TM9SF) [Medicago truncatula] (GB:ABE93901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) 0.752890341942947 8.39593805191808 5.32273653981227e-06 0.000164959905164452 12.5478009479456 17.2010002053799 0.752890341942947 0.0679652318397682 AT5G67210_at 1.50450295891901 1.27947430625573 2.74982334358274 2.10566732619859 1.66082377931645 1.86914804620944 1.69992907667162 1.62169113563940 1.42989265423021 1.43344730416922 2.51738822295447 2.50053369417429 2.36130904587881 2.80153025115519 3.16773145605455 2.78669631172987 3.29232140268662 2.74466796060851 1.61650089569859 0.215735380833338 0.218340369859766 0.215735380833338 0.217921528911751 0.220878815178620 0.215773782398537 0.219740198268206 0.217776917793077 0.242016866738258 0.219045820377925 0.216978542017293 0.220013798663290 0.220361338687882 0.216173203883041 0.221633741987992 0.216729096021774 0.231369072676152 0.22996517567852 0.223874119566947 5 5 + 26836599 26837138 26836857.818 26836175 26837383 + gene protein_coding_gene TRUE TRUE AT5G67210.1 nucleic acid binding / pancreatic ribonuclease similar to nucleic acid binding / pancreatic ribonuclease [Arabidopsis thaliana] (TAIR:AT3G50220.1); similar to Uncharacterized plant-specific domain 01627 [Medicago truncatula] (GB:ABE82263.1); contains InterPro domain Protein of unknown function DUF579, plant; (InterPro:IPR006514); contains InterPro domain Pancreatic ribonuclease; (InterPro:IPR001427) 0.924104131455658 8.39170227629275 5.34779446641855e-06 0.000165618106176351 12.5433379694327 3.94378378552644 0.924104131455658 0.124201543784426 AT5G14530_at 5.09494609411634 5.82910166363117 6.76494254793795 7.04724080226257 7.08373606915187 7.63275664418948 4.23558731902941 5.33754722059293 4.47489474080879 3.94608640091993 4.8767008760026 4.75413524705118 5.8358292731853 5.58017697121653 4.59977067599963 4.9411626576258 4.98226595002064 5.12771647298706 4.07756517618039 0.232728542263675 0.234141139396014 0.240952717840464 0.240062124913821 0.235176946654217 0.252777075817801 0.235842074340336 0.237817435268919 0.240374193091301 0.253004381746648 0.234666603614372 0.238922000617982 0.246335978962068 0.243312448912842 0.238883140885483 0.232728542263675 0.242980290572191 0.248864836775614 0.237865495702506 5 5|0 -|/ 4684785 4686003 4685352.625 4684623 4686912 - gene protein_coding_gene TRUE TRUE AT5G14530.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G66240.2); similar to hypothetical protein DDBDRAFT_0218126 [Dictyostelium discoideum AX4] (GB:XP_641992.1); similar to Os07g0589400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060150.1); similar to Os05g0543300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056203.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 1.4644555505422 8.39096731188663 5.35215533416962e-06 0.000165634849125603 12.5425633643111 10.7549332308544 1.4644555505422 0.252826640482159 AT5G56790_at 4.77872116374614 5.40835200617342 5.81093202477462 5.51490141295828 6.79598465028099 6.3300034981628 4.94583796045046 5.528528085325 5.08608038749725 5.23203617281458 6.16635705940862 6.9353314171907 6.49316094791787 6.60854257909752 6.22158417504601 6.60181317548805 5.98513322590622 6.52131638795892 5.08451326921081 0.27002845374111 0.258994567394758 0.273174089364172 0.2616351959418 0.259071599317085 0.257836119348737 0.265515687351595 0.255256060026979 0.283738953699466 0.256285650828568 0.259269184450273 0.259099392315185 0.259020920053731 0.261833214651950 0.266188299576461 0.261410211473235 0.266639497483268 0.267446696178250 0.260828593812981 5 5|0 +|/ 22987733 22988442 22988089.333 22985165 22988762 + gene protein_coding_gene TRUE TRUE AT5G56790.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G13690.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G55200.1); similar to Os01g0602800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043500.1); similar to dual-specific kinase DSK1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52649.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.12752026022397 8.3859516078053 5.38201862361036e-06 0.000166440236792661 12.5372754140263 11.4270900073219 1.12752026022397 0.176544201641581 AT5G04520_at 5.09051173053365 4.88857523239584 6.09376232757356 6.03671037750381 6.45917013808942 5.38543805619638 4.09939477790654 4.24841723558585 3.56968347321714 3.83938074559932 4.52319834362646 4.33156981075377 5.11048594749777 4.63119887816614 4.20038243988601 5.07006402508743 4.51061636201105 4.64032315262947 3.57841036458192 0.25468134931189 0.259353433882907 0.264999846380782 0.256610245882901 0.269320887637522 0.261900931561333 0.256790088077215 0.259736194750756 0.263933978496994 0.25468134931189 0.25468134931189 0.25468134931189 0.255624800441652 0.257182645537243 0.255430799836827 0.25468134931189 0.273356640708141 0.266274253933521 0.256748780640158 5 5|0 -|/ 1290028 1290571 1290376.3 1290013 1291064 - gene protein_coding_gene TRUE TRUE AT5G04520.1 oxidoreductase/ transition metal ion binding similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT1G06240.1); similar to Si:xx-184l24.3 protein [Danio rerio] (GB:AAH96959.1); similar to Os03g0363200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050162.1); contains InterPro domain Protein of unknown function UCP012318; (InterPro:IPR011197); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078); contains InterPro domain Protein of unknown function DUF455; (InterPro:IPR007402) 1.18839191144656 8.38277723833542 5.40101179620854e-06 0.000166908554956777 12.5339271915299 9.4326081833515 1.18839191144656 0.191077862585409 AT5G06050_at 4.51629037154453 4.43310877817579 4.94801276599866 4.63198477051239 5.59465505465444 5.18448311958752 4.86174541346669 4.54925433053024 4.93070586901256 5.16465759809431 5.97687691904421 7.21446301187886 5.53510910086242 6.34393036751695 7.11787648743269 5.67693474232801 5.45027246119916 6.65647776572206 4.99808681758127 0.211394567862365 0.209620206036173 0.214404783850374 0.210077308816466 0.209600370556251 0.211958951433772 0.217686786178829 0.214291093013309 0.219002529038862 0.209618961571708 0.211664983506735 0.209783985149681 0.211034607602299 0.212886872820056 0.215027637956202 0.211667360624887 0.217197302325464 0.215305701220049 0.213879983179801 5 5|0 +|/ 1822690 1823515 1823102.8 1820135 1823771 + gene protein_coding_gene TRUE TRUE AT5G06050.1 dehydration-responsive protein-related similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G39750.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G77260.1); similar to Os01g0846600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044791.1); similar to Os04g0692400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054368.1); similar to ankyrin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82580.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.85751335818047 8.36275421895285 5.52249915868543e-06 0.000170541348604704 12.5127797922671 10.4787631765058 0.85751335818047 0.105646231758284 AT5G34850_at 10.5130749310613 10.5694341235205 11.6479894699185 11.5480392236023 11.4924326639765 11.4116764533531 11.0579382543151 11.1470862402463 10.9201707308954 10.9800060632078 11.4509998083729 11.3832127734263 11.7737528309404 11.5393097264251 11.5186480923561 11.5725489808864 11.6364261150825 11.8363773841591 10.8981913966751 0.0704256452228651 0.0675166774242906 0.0661945495388638 0.0648768711632054 0.0672610623212908 0.0668788756742225 0.0696069614411975 0.0651545361242598 0.0648510284513226 0.0661572438806752 0.0652984665054229 0.0660990817963791 0.0637797022147073 0.0702997122490054 0.0665011703192345 0.0642010909277997 0.0729577592115876 0.0640239467898551 0.0684407251917188 5 0|5 /|- 13125917 13126784 13126363.625 13125384 13128861 - gene protein_coding_gene TRUE TRUE AT5G34850.1 ATPAP26/PAP26 (purple acid phosphatase 26); acid phosphatase/ protein serine/threonine phosphatase similar to PAP1 (PURPLE ACID PHOSPHATASE 1), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G27190.1); similar to purple acid phosphatase-like protein [Glycine max] (GB:AAN85416.1); similar to acid phosphatase [Lupinus luteus] (GB:CAD30328.1); similar to Metallophosphoesterase [Medicago truncatula] (GB:ABE78365.1); contains InterPro domain Fibronectin, type III-like fold; (InterPro:IPR008957); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.6796355662284 8.36074844666647 5.53483087380522e-06 0.000170800513860969 12.5106587431310 22.4343083504403 0.6796355662284 0.0287683999782383 AT5G40270_at 3.61193286293353 3.91662076378363 4.77172056573283 4.97131967678255 5.06489832647344 5.35328478414596 4.33811413486626 4.27732890646543 3.69691757138980 4.3646516294141 4.67524020617041 4.26705317411741 4.6708085229509 4.56383890720902 4.30289447691131 5.08768358508121 4.64167466904587 4.6433229585455 4.07203829950708 0.215514693785111 0.215514693785111 0.222595668532844 0.215514693785111 0.217278948666753 0.229989885088328 0.217147153712810 0.228782881614567 0.220413351784095 0.223177117626534 0.216019228770984 0.217215824256456 0.219397557445744 0.220496901750971 0.217025151550927 0.217180778117479 0.218796590137141 0.221044995065975 0.217314370032018 5 5|0 -|/ 16110649 16111756 16111334.4 16110400 16114460 - gene protein_coding_gene TRUE TRUE AT5G40270.1 metal-dependent phosphohydrolase HD domain-containing protein similar to metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40290.1); similar to Os01g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041793.1); similar to Metal-dependent phosphohydrolase (ISS) [Ostreococcus tauri] (GB:CAL49984.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain Metal-dependent phosphohydrolase, HD subdomain; (InterPro:IPR006674) 0.783167700169223 8.3578660014467 5.5526046641158e-06 0.000171227129163859 12.5076097923992 8.86370270061842 0.783167700169223 0.0810842110268745 AT5G05540_at 5.09303777437543 4.84519472267572 6.05267905080209 5.94056718153559 7.2676138302243 6.66818966257506 4.68364759795881 3.66236116758985 4.2033687180923 4.38778682499431 4.74926116120556 4.79510828818953 5.12859189497695 4.50457426025384 5.42616121278786 5.0763953758474 5.42252119831005 5.05316559583899 4.59600459352076 0.245057339922658 0.243048432942873 0.250764110651940 0.250356995103226 0.252852568564425 0.256427555632165 0.241264772332542 0.252354951136118 0.241264772332542 0.241264772332542 0.242442118371266 0.244866027954178 0.241615895641352 0.246666586871311 0.243340217127939 0.243070708549497 0.250236838815266 0.241326264738009 0.241264772332542 5 5|0 +|/ 1637959 1638703 1638302.667 1636299 1638940 + gene protein_coding_gene TRUE TRUE AT5G05540.1 exonuclease family protein similar to exonuclease [Arabidopsis thaliana] (TAIR:AT5G67240.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 1.26747722176239 8.35579979610556 5.56538332768964e-06 0.000171499211490935 12.5054236192600 10.2342575829481 1.26747722176239 0.210268933600064 AT5G45300_at 3.72245947277291 3.70697229276409 4.38454578534658 4.0749246629307 4.8114799261171 5.02325333073515 4.2343716209055 4.25537947683667 3.13296712233437 3.19770933476802 3.69280434969895 4.31481330496331 4.26793842349331 4.61442029939903 4.19530898161048 4.22174548120586 3.80662041777613 4.28336821843604 3.52472749213601 0.217525799569841 0.225497338715311 0.219030170582610 0.214512667045647 0.219415662450704 0.221145777271792 0.217046547679361 0.218275606373402 0.220394939332631 0.214512667045647 0.215366012127885 0.217544112565241 0.225235844753337 0.215990659628005 0.227864517816179 0.214512667045647 0.250960759100405 0.214512667045647 0.215476414298494 5 5 + 18373089 18373760 18373412.182 18370835 18374102 + gene protein_coding_gene TRUE TRUE AT5G45300.1|AT5G45300.2 BMY2; beta-amylase similar to BMY4 (beta-amylase 4), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G45880.1); similar to Os02g0129600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045777.1); similar to Os09g0569200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063976.1); similar to beta-amylase [Castanea crenata] (GB:AAK30294.1); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain BZR1, transcriptional repressor; (InterPro:IPR008540) 0.741623997644674 8.34613842566788 5.62555869315574e-06 0.000173104005125805 12.4951944978492 8.0065543632106 0.741623997644674 0.0650727871051747 AT5G51545_at 9.85414866156109 9.9245100784356 10.1495672180772 10.2082159740018 10.6117075787775 10.4729253737553 9.89939261302768 9.88207346488484 9.60644095784684 9.7237100607541 10.5946454110417 10.7288571936678 10.4089634459756 10.5662353932414 10.8371561490438 10.6438427180671 10.2132986963680 10.4092517856376 9.66067932442863 0.09888898159472 0.0910452704081521 0.0910452704081521 0.0910452704081521 0.0915044878887465 0.093023517648412 0.0961475455950823 0.0927249159803882 0.114727439792408 0.0956805562058524 0.0910452704081521 0.0910452704081521 0.0949181363184146 0.096669136526644 0.0948411166450267 0.0910452704081521 0.098624151494345 0.0961545897748296 0.0985516215748206 5 5|0 +|/ 20953777 20954376 20954018.5 20953652 20954639 + gene protein_coding_gene TRUE TRUE AT5G51545.1 similar to Os02g0125000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045742.1); contains domain Subunit VIII of photosystem I reaction centre, PsaI (SSF81540) 0.678622033231423 8.34602455959208 5.62627208500725e-06 0.000173104005125805 12.4950738736563 20.2322633520519 0.678622033231423 0.0289321619046834 AT5G01400_at 7.29178931026287 7.06286692857348 7.9276342613714 7.68442607771833 7.82507493792647 7.73912624760582 6.81083421308104 6.91581726821744 6.97444963287043 6.81374282331166 7.46176974806087 7.46823420045595 7.60598815209205 7.37740081406193 7.38761733328875 7.67997818209284 7.94928875768145 7.2100432385026 6.67284107703765 0.118609589945499 0.122795299144795 0.117535715370738 0.120638656615518 0.122832428418556 0.123121586571490 0.125666727516320 0.124084199978958 0.127337863947650 0.122494594241609 0.128806755460888 0.121303439954716 0.127327491451790 0.129667825790266 0.123475528324902 0.129031124868235 0.125158829985809 0.124686890258498 0.120305648157903 5 5 - 162921 163375 163162.455 162549 171071 - gene protein_coding_gene TRUE TRUE AT5G01400.1 ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27595.1); similar to Os07g0693900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060734.1); similar to MGC53503 protein [Xenopus laevis] (GB:AAH47265.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.735466996664052 8.34551933362838 5.62943859891892e-06 0.000173104005125805 12.4945386430258 14.576138437771 0.735466996664052 0.0623871775787982 AT5G18040_at 5.65756880487547 5.4876220394883 6.91222802427206 6.99542941464112 7.38058765175788 6.81142400908062 6.392666241449 5.51614990987336 5.32372330393207 5.58880142678589 6.14536956447459 6.08059877610469 6.37253905689398 6.58279842868372 6.37674881208535 6.73816468975193 7.14395316115671 6.43790643235667 5.41447577292485 0.207366555225540 0.207090789888720 0.197092654656872 0.208146553591986 0.219119994292752 0.229719873446060 0.199517126441667 0.206437329864168 0.21414135728305 0.208940925891375 0.200173587294417 0.195365270145561 0.198695131774201 0.201179171582827 0.195365270145561 0.199935278583359 0.195365270145561 0.200480183940634 0.205006886931054 5 5 + 5973291 5973898 5973693.375 5972421 5974158 + gene protein_coding_gene TRUE TRUE AT5G18040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18065.1); contains domain Cysteine proteinases (SSF54001) 1.15192094499529 8.34241986362824 5.64890682777607e-06 0.000173579542844518 12.4912544291917 12.3577561951311 1.15192094499529 0.18379941101553 AT5G57000_at 4.62987394115436 5.13922415402907 5.92835842727255 6.03367680687911 6.27317105110722 6.18175166776443 5.15566322383094 5.41475551911493 5.44048504256474 4.99190272143391 6.39261030586578 5.88251087564705 5.37043696899552 6.42268858962876 5.5938486460294 6.01588783549067 5.51054026167115 5.67755448198311 5.1456891567188 0.218227877505600 0.218017373690476 0.217998565605834 0.222363899416638 0.216674842722827 0.223476963568501 0.217957925323487 0.213589410321997 0.215134878818068 0.214524911810751 0.224182199958821 0.213589410321997 0.222219447087552 0.21830652498907 0.216667785636241 0.213589410321997 0.219001053288403 0.215065458244588 0.220118903805420 5 5 - 23081113 23082404 23081498.182 23080941 23082576 - gene protein_coding_gene TRUE TRUE AT5G57000.1|AT5G57000.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to Os09g0363700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062994.1) 0.84246385874081 8.33655451847977 5.68594752563435e-06 0.000174593991206095 12.4850363228601 11.1200353751790 0.84246385874081 0.101796149162733 AT5G40960_at 3.84097808654584 4.99128414665604 5.99627960823483 6.5841923722081 7.0974610062519 6.71783302732905 5.49214575208362 5.97471511308329 4.50727817045123 5.12443719903695 6.10318447259619 6.07119472763123 6.16345349601715 6.05690559997067 5.20563818683086 6.60109431513962 5.9820073956316 6.92434637291638 4.7746240206071 0.313072745837934 0.282518612760898 0.290264311625887 0.291512432742818 0.282653063688388 0.285023890391814 0.284312886849357 0.278335877922151 0.297872638273399 0.278335877922151 0.289482855242910 0.286457682273715 0.282552695132613 0.298294806020349 0.298763357475487 0.278335877922151 0.294547966519145 0.278335877922151 0.278335877922151 5 5 - 16429976 16430153 16430073.091 16429973 16430179 - gene protein_coding_gene TRUE TRUE AT5G40960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63500.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45503.1); similar to Os01g0849500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044809.1); similar to P0402A09.15 [Oryza sativa (japonica cultivar-group)] (GB:BAB62632.1) 1.43026283486186 8.33338380630676 5.70608046488461e-06 0.000175088197653945 12.4816731923025 11.3071567394858 1.43026283486186 0.247524801293375 AT5G57815_at 9.59261556385475 9.66918545466234 10.2414527085603 10.5864375031098 10.5986611515036 10.2362853558563 9.09298489891017 9.56361673320688 9.132888861895 9.07643947708519 9.9194959891369 9.84558539248749 10.0390185327750 10.2375143899255 9.4808667936704 10.2971588530766 10.0668757358320 9.7488719733106 9.05530738361226 0.108699864015894 0.110120890993577 0.115076643334452 0.113243049105233 0.113486308860073 0.107453642150403 0.112691391708983 0.111037871662706 0.121292348520656 0.107826915661040 0.107210926203810 0.108251298291558 0.106085089475863 0.106457941298219 0.114539075447884 0.107909609994658 0.112354605123341 0.113125645465562 0.111823629357643 5 5|0 +|/ 23444475 23444836 23444635.889 23443894 23445082 + gene protein_coding_gene TRUE TRUE AT5G57815.1 cytochrome c oxidase subunit 6b, putative similar to cytochrome c oxidase subunit 6b, putative [Arabidopsis thaliana] (TAIR:AT4G28060.1); similar to putative cytochrome c oxidase subunit [Triticum aestivum] (GB:AAM92706.1); similar to Os04g0498200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053212.1); similar to Os03g0390400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050275.1); contains InterPro domain Cytochrome oxidase c, subunit VIb; (InterPro:IPR003213) 0.90116003354748 8.33009976788097 5.72701430577815e-06 0.000175606262965306 12.4781885839552 19.4689726037368 0.90116003354748 0.119606690189125 AT5G08300_at 10.0542664250566 10.2151579942304 10.8796515696397 10.8985541874915 10.4090998169698 10.1467852030672 9.56763027862111 9.78561428982255 9.50526303795967 9.38951847617383 10.2243067011600 10.3007769721746 10.1064295551620 10.0360077767358 10.2425676297005 10.1867198197255 9.91727236917416 10.0896960554312 9.1084309585031 0.084636746079314 0.084636746079314 0.0855450938105598 0.0846437796336319 0.0850501858526092 0.0884454436627549 0.0866762065342498 0.0846511536977295 0.0875441399991325 0.0886697374053565 0.086688350152278 0.084965298219846 0.0847649728968443 0.0903623775071258 0.084636746079314 0.0865873477039627 0.0917603862922955 0.089223537259149 0.087853301269768 5 5|0 +|/ 2668430 2669623 2668890.2 2667413 2669918 + gene protein_coding_gene TRUE TRUE AT5G08300.1 succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative Identical to Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha-1) (SCS- alpha-1) [Arabidopsis Thaliana] (GB:P68209;GB:O82661;GB:P53586); similar to succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] (TAIR:AT5G23250.1); similar to succinyl-CoA ligase alpha 2 subunit [Lycopersicon esculentum] (GB:AAT67464.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain CoA-binding; (InterPro:IPR003781); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) 0.740711699860905 8.32885831925249 5.73494944511207e-06 0.00017572530119323 12.4768709770615 19.9807831043391 0.740711699860905 0.0653426068107013 AT5G20400_at 6.36132216244062 6.86696393266204 5.3521709383507 5.50534670193993 7.08689958667521 7.20288412472961 1.69046910937931 1.63553973004331 3.66195061984716 2.55691666362231 2.42404516381315 2.52998133452447 2.67399423465946 2.81150981730488 2.15279569382453 1.63510540959857 2.93495918762813 3.14150544592087 2.93445174503512 0.275171758362902 0.2782820264516 0.265412984531667 0.27767685675139 0.28550694471745 0.277479091259526 0.269506118411135 0.269014317695425 0.270124910624792 0.273192492904969 0.263136141528527 0.262227327092744 0.264586660314046 0.261810317327365 0.269901214915005 0.263166490264136 0.272907960152637 0.261279523548927 0.262251399634007 5 5 + 6895417 6896155 6895842.182 6894846 6896351 + gene protein_coding_gene TRUE TRUE AT5G20400.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G49390.1); similar to ethylene-forming-enzyme-like dioxygenase [Prunus armeniaca] (GB:AAB88878.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.817566148683468 8.32617754249865 5.75212513403479e-06 0.000176104082695272 12.4740251121661 8.00724622514965 0.817566148683468 0.094089243671095 AT5G40930_at 8.79710628409468 9.03122361342182 9.91193032350713 9.79881136481462 9.75301960255875 9.40960866789319 9.14346587281928 9.10235223969559 8.07771856655914 8.41064148495744 9.02849458091024 9.04765316808915 9.24568700359778 9.10818835880396 9.01922251529473 8.96080492385912 8.87078040201373 8.82511669909781 8.06842145384548 0.158125447765451 0.1525690243715 0.147508401898147 0.157203360317176 0.153761655604197 0.150981061290288 0.153780642075948 0.153440491704192 0.159193975675140 0.158722985823012 0.150082252446785 0.147508401898147 0.149148083385149 0.153187782262831 0.154503676032237 0.156165501440132 0.158996776691304 0.158385412697549 0.158174054378295 5 5|0 +|/ 16421776 16423028 16422547.9 16421685 16423230 + gene protein_coding_gene TRUE TRUE AT5G40930.1 TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4) Form of TOM20, which is a component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins Identical to Mitochondrial import receptor subunit TOM20-4 (Translocase of outer membrane 20 kDa subunit 4) (TOM20-4) [Arabidopsis Thaliana] (GB:P82805); similar to TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3), protein translocase [Arabidopsis thaliana] (TAIR:AT3G27080.1); similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit) (GB:P92792); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.763727554261608 8.3256619781904 5.75543472011662e-06 0.000176104082695272 12.4734776991327 17.9678583918901 0.763727554261608 0.0748805397785394 AT5G03910_at 8.54166510577514 8.33171278925127 9.36247410898744 9.31863366931976 9.4790043798483 9.0607772379609 8.96096541983471 8.84393389821486 8.4122912746295 8.50072599943898 9.56299898540785 9.53098033286641 9.44858167842458 9.51183709541356 9.39714819532992 9.8440146299207 9.44745691353297 9.5359440844353 8.8728800414812 0.134692804523010 0.136686918976326 0.145468251397698 0.129896140587382 0.137325103835906 0.131028386604584 0.135915437355101 0.134585984730007 0.158273745764399 0.143532820167499 0.134471079651191 0.135662991436557 0.133244020953316 0.138457682477242 0.132648270124618 0.132060906843933 0.135992527839732 0.144258253835902 0.140961598159395 5 5|0 -|/ 1054320 1055268 1054632.875 1054077 1057166 - gene protein_coding_gene TRUE TRUE AT5G03910.1 ATATH12 (Arabidopsis ABC transporter homolog 12); ATPase, coupled to transmembrane movement of substances member of ATH subfamily Identical to ABC2 homolog 12 (ATH12) [Arabidopsis Thaliana] (GB:Q9LZB8;GB:Q56WM5;GB:Q9FFM7); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28345.1); similar to ATPase [Synechococcus elongatus PCC 7942] (GB:YP_399101.1); similar to Os04g0413000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052745.1); similar to OSIGBa0134P10.6 [Oryza sativa (indica cultivar-group)] (GB:CAH67360.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.787612089996644 8.32477205332997 5.76115230340628e-06 0.000176154713351666 12.4725327243531 18.0524804984489 0.787612089996644 0.0838221269673284 AT5G16730_at 5.98269456652483 6.44515957132719 7.03972360452589 7.06631073878958 7.79032843579607 7.76908635665794 6.864676204545 7.34729609429864 7.97128600450356 8.09116083049209 9.50037398771157 9.21487481109878 8.94477238287182 9.32461680727273 8.7693809138068 9.13487187302483 8.5389230825686 9.00408235261328 8.04457527283192 0.213821609591511 0.20464066869004 0.211494762271997 0.202868583621626 0.209157506736704 0.208872274525610 0.203872467166905 0.210597273839716 0.211268784097692 0.205249832085834 0.204600952089685 0.202868583621626 0.202868583621626 0.205869121559112 0.204489653174825 0.202868583621626 0.204800712495888 0.206583645762945 0.202868583621626 5 5 + 5500193 5500671 5500428.636 5497646 5500848 + gene protein_coding_gene TRUE TRUE AT5G16730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02930.1); similar to Protein kinase PKN/PRK1, effector [Medicago truncatula] (GB:ABE94710.1); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) 0.88735933259849 8.32310785410842 5.7718609330271e-06 0.000176357772824216 12.4707653235332 15.5829899777149 0.88735933259849 0.115824381173498 AT5G10440_at 1.87417852488258 1.83815945800694 3.75623878929047 3.37867937321222 2.47082956566409 2.42506985796714 2.09117455352286 2.01718088542670 2.48202320658934 1.96768302304208 2.56082313178807 2.58696952535057 2.46873428083874 2.34691661255881 2.74059673716828 2.53000057259515 2.93739869236298 2.93565816395750 2.15724863768281 0.278148440402798 0.266699831281613 0.289856375602564 0.278939321398453 0.273974875107822 0.266140856167485 0.260629181379715 0.260796896949928 0.288098613230519 0.2609823235266 0.266038889296935 0.260629181379715 0.276910235034246 0.260629181379715 0.276056001727423 0.266233975891317 0.279579341543522 0.264811218944185 0.277489936712599 5 0|5 /|- 3280656 3281596 3281206.5 3280517 3282412 - gene protein_coding_gene TRUE TRUE AT5G10440.1 CYCD4;2 (CYCLIN D4;2); cyclin-dependent protein kinase core cell cycle genes similar to CYCD4,1 (CYCLIN D4,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G65420.1); similar to cyclin D2.1 protein [Nicotiana tabacum] (GB:CAA09852.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.74429998327324 8.31670375767237 5.81327067332715e-06 0.000177497950476522 12.4639609807615 4.90179162783775 0.74429998327324 0.0673397257221785 AT5G64960_at 7.50376826811051 7.32146432703245 8.05135818879381 8.32628709838874 8.3967841097535 8.07537535178935 7.17671067646584 7.28044259245934 6.97623359522016 6.99794178121797 7.73422132971864 7.83032918782433 7.9867685870971 7.51272573565903 7.82689803262318 7.98376245431534 7.42763581167024 7.50601981824897 7.19966948272195 0.176336102112535 0.170273517486889 0.16757791946319 0.176943035587287 0.164968988173353 0.171581247974789 0.169255494543554 0.170686176791297 0.177343893816324 0.182694474513668 0.173373359637659 0.167553037996751 0.170962381010845 0.168747332404839 0.181278846386454 0.166748150069530 0.177378056927076 0.176250464007107 0.167996387534929 5 5 + 25974969 25975533 25975353.818 25972610 25976221 + gene protein_coding_gene TRUE TRUE AT5G64960.1|AT5G64960.2 CDKC;2 (CYCLIN-DEPENDENT KINASE C;2); kinase|CDKC;2 (CYCLIN-DEPENDENT KINASE C;2) similar to CDKC,1 (CYCLIN-DEPENDENT KINASE C,1), kinase [Arabidopsis thaliana] (TAIR:AT5G10270.1); similar to cyclin dependent kinase C [Solanum lycopersicum] (GB:CAC51391.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to CDKC,1 (CYCLIN-DEPENDENT KINASE C,1), kinase [Arabidopsis thaliana] (TAIR:AT5G10270.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); similar to cdc2MsC [Medicago sativa] (GB:CAA65979.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.779975777211114 8.30589141135209 5.8839158128241e-06 0.000179413570913969 12.4524616637407 15.1585205296148 0.779975777211114 0.0817002288936112 AT5G16990_at 9.0169575350053 8.8917727685516 9.86022532462794 9.74082743155987 10.0384064515056 9.72838831844414 9.8841330576106 9.54577473925744 8.8650590978545 9.0105088283081 9.94988365201682 9.95276130067255 9.96867221271275 10.0877027558818 9.83682078788618 9.9484579376955 10.0842833263952 10.0432440492285 8.86576409683233 0.106390222897110 0.104882371604278 0.101037989359302 0.0998411084191672 0.0973813274924065 0.103927435167852 0.099047398824457 0.0986668666917837 0.108620683407875 0.100914363233011 0.105929007658319 0.0992008461102515 0.0980611057418614 0.0984237968912974 0.101520703961158 0.098852717413071 0.102269282093328 0.0973813274924065 0.103418499036223 5 0|5 /|- 5581870 5582189 5582049.8 5581661 5584032 - gene protein_coding_gene TRUE TRUE AT5G16990.1 NADP-dependent oxidoreductase, putative Identical to Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74) (P2) [Arabidopsis Thaliana] (GB:Q39173;GB:Q9LFK3); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 0.788751634120497 8.30581872406847 5.88439386375906e-06 0.000179413570913969 12.4523843105104 19.0371885002250 0.788751634120497 0.0848717443232724 AT5G11560_at 10.1940929902206 10.2545290254227 10.8506881973960 10.8191961062351 10.5237199699044 10.4829546339638 9.8348223580484 9.81413519285936 9.46056730670902 9.72154606816708 10.4161038387702 10.5154791650657 10.2941500597565 10.2170913135225 10.3891372395104 10.2666908535637 10.0651367180494 10.3299103002154 9.70978110709652 0.0748417179977241 0.0736958945061543 0.074980928770081 0.074175430539542 0.0729095474492068 0.0774776691706785 0.074559060335399 0.0793172662239545 0.0882954060033211 0.0799070756420076 0.0755491412638366 0.0745565581746625 0.078678592221268 0.0845146558187 0.0771163852418147 0.074109322580741 0.0817835338590089 0.0777318617275084 0.0752020578403794 5 5|0 -|/ 3709826 3710382 3710025.5 3709482 3714060 - gene protein_coding_gene TRUE TRUE AT5G11560.1 catalytic similar to hypothetical protein LOC419470 [Gallus gallus] (GB:NP_001012856.1); similar to Os05g0230600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054975.1); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047); contains InterPro domain Protein of unknown function DUF1620; (InterPro:IPR011678) 0.66291288865144 8.30509203186703 5.88917549514258e-06 0.000179413570913969 12.4516109353958 20.3179392742801 0.66291288865144 0.0142010702453236 AT5G10240_at 3.79839639436747 4.3590958396067 4.74871337712464 4.91076280759968 4.80494656524045 4.913498928999 4.64115236634495 4.67703735693246 4.22764090401934 4.44893603113261 5.45107929606399 6.09879193723507 5.3651739812713 5.46451173467161 6.24893714602911 5.6790217419707 5.84131849784943 5.61687497959473 4.85573388887465 0.197007048140431 0.192363632930878 0.195162042798723 0.199231381082448 0.192168732178015 0.196553423721144 0.198006528523979 0.192557119104783 0.198333364666175 0.196210223167155 0.201264294958921 0.200011025870942 0.193166561017529 0.203791469605465 0.194181685897553 0.19733554243237 0.196441955715119 0.192197023607652 0.195618988802333 5 5|0 -|/ 3212935 3213965 3213313.333 3212689 3216467 - gene protein_coding_gene TRUE TRUE AT5G10240.1|AT5G10240.2 ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) Encodes asparagine synthetase (ASN3). similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN2 (ASPARAGINE SYNTHETASE 2), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G65010.1); similar to aspara (GB:CAJ43590.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Asparagine synthase, glutamine-hydrolyzing; (InterPro:IPR006426); contains InterPro domain Asparagine synthase; (InterPro:IPR001962) 0.842751660044126 8.30403823579288 5.89611693574271e-06 0.000179413570913969 12.4504893299712 9.72244242403256 0.842751660044126 0.102922467676585 AT5G19980_at 7.71206341648755 7.8783980612103 8.61111189509822 8.81794054186271 8.06071747559507 7.00019286992814 5.99823750658131 6.72738438188695 6.6882465002666 4.80926683708236 7.38399715675383 7.8817812113538 7.18697090876649 7.57846796385251 7.48831747102849 7.1760110544519 6.69089083014065 7.64552749212437 5.76000549508292 0.213111636070083 0.216598117261848 0.229604131376586 0.221906393708496 0.212092737550653 0.260007106489227 0.224086805708748 0.218853895826919 0.233230372429234 0.226412409981325 0.225001098118477 0.215054123959472 0.217234704210351 0.222949745507306 0.21898335242483 0.214785613555816 0.230293665850167 0.223838558779954 0.224059096601082 5 5 - 6750074 6750475 6750306.636 6749707 6751072 - gene protein_coding_gene TRUE TRUE AT5G19980.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G76340.1); similar to integral membrane protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33996.1); similar to Os08g0203900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061227.1); contains InterPro domain UAA transporter; (InterPro:IPR013657) 1.33497954383061 8.30394982400045 5.8966997136484e-06 0.000179413570913969 12.4503952229908 14.1665066628494 1.33497954383061 0.227408111271815 AT5G23420_at 2.92793990714117 2.78465409048943 3.91228001860669 3.92796479399303 2.86567588000789 2.73344288422404 3.33167510476518 3.36409695280157 2.18517672185134 2.91975781190283 3.84780630132211 4.15939714953922 3.192912727677 3.63853746809507 4.29723643076275 3.55068341195395 3.44123162937605 3.29876150164295 2.61359205413673 0.185880383778782 0.177135575257212 0.174469379051378 0.18123398496318 0.180883671842929 0.189188204875365 0.173764414932717 0.174639884343987 0.181857613369791 0.178532066086650 0.181666934135590 0.184842733560082 0.180060546804194 0.180417463064880 0.185577382241491 0.178889821186573 0.173410893671220 0.175685335759856 0.177147319915601 5 5|0 -|/ 7889284 7889813 7889605.5 7888516 7890183 - gene protein_coding_gene TRUE TRUE AT5G23420.1 HMGB6 (High mobility group B 6); transcription factor Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins similar to high mobility group (HMG1/2) family protein [Arabidopsis thaliana] (TAIR:AT5G23405.1); similar to HMG-protein [Plantago major] (GB:CAJ38371.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.681614005995542 8.30243727892647 5.90667950862475e-06 0.000179591188242687 12.4487850987781 6.35654771575851 0.681614005995542 0.0343126767079635 AT5G27410_at 4.53598027894618 4.42956679248096 6.06577896021904 5.9160123948294 5.62917140022955 5.26610844110228 4.85195673199642 4.20021989229342 4.09792120746823 4.7927272165924 5.35714252470886 4.7952675599871 4.98274148739456 5.42395207829464 4.59856261687363 5.64847295510891 4.96338340262564 4.78222872232745 4.29232997760652 0.187695404003609 0.192679182978827 0.183226676793950 0.196532221704715 0.187527020724271 0.190171331748999 0.184835201790886 0.188673621013335 0.191965390429255 0.188901972632654 0.187685707970601 0.185679102407681 0.192896499555605 0.191478388326424 0.186412478810773 0.183911007481485 0.203159295315406 0.189830522835130 0.186866115766355 5 5|0 +|/ 9681183 9682420 9681832.222 9678669 9682943 + gene protein_coding_gene TRUE TRUE AT5G27410.1 aminotransferase class IV family protein Identical to Branched-chain-amino-acid aminotransferase-like protein 2 [Arabidopsis Thaliana] (GB:Q9ASR4); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT3G05190.1); similar to Aminotransferase, class IV [Medicago truncatula] (GB:ABE80609.1); similar to branched-chain amino acid aminotransferase-like protein [Cicer arietinum] (GB:CAD70620.1); similar to branched-chain amino acid aminotransferase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96064.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544) 0.944739829845933 8.29279475133996 5.97073206303119e-06 0.000181411473931257 12.4385140073778 9.84349688766423 0.944739829845933 0.132962919323356 AT5G20320_at 5.70587187328654 5.6323109431419 6.28864347105102 6.64601035851198 5.9787768266917 6.18500777605056 4.73560769799901 5.2262957456656 4.44322718741357 4.79011480980153 5.11032865644433 5.79929894152818 5.40449860418574 5.13486938531072 5.46058726618791 5.54524223866814 6.34412488306071 5.75030128668454 5.10104269201715 0.224065416995 0.217995796424894 0.228388050424030 0.231588690884269 0.223348859951587 0.242898181821882 0.222210499896670 0.229273392915377 0.241678078481769 0.226411946045621 0.215026036661784 0.2201152276628 0.223294301791538 0.239653743895479 0.217752178466460 0.223587768739205 0.224396550115165 0.221394906771325 0.230493329505939 5 5|0 -|/ 6859580 6860261 6859899.7 6859220 6869268 - gene protein_coding_gene TRUE TRUE AT5G20320.1 DCL4 (DICER-LIKE 4); RNA binding / ribonuclease III Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein. similar to DCL2 (DICER-LIKE 2), ATP-dependent helicase/ ribonuclease III [Arabidopsis thaliana] (TAIR:AT3G03300.1); similar to Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Type III restriction enzyme, res subunit; Ribonuclease III, bacterial [Medicago truncatula] (GB:ABE81761.1); similar to OSJNBb0065L13.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE03362.1); similar to Dicer-like protein 4 (GB:P84634); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain Protein of unknown function DUF283; (InterPro:IPR005034); contains InterPro domain Ribonuclease III; (InterPro:IPR000999); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) 0.870058110533875 8.29205608240607 5.97566971547165e-06 0.000181434352970728 12.4377267239567 10.9732079053012 0.870058110533875 0.111674343725641 AT5G64400_at 11.8607585990783 11.9725758924704 12.7037997997497 12.7544250914959 12.2577330779568 12.1887634864429 11.5569428221101 11.9138369203195 11.6421207001324 11.654748275427 12.4739107632183 12.4051643071526 12.5570402843728 12.5978745271852 12.3297208354603 12.5610726005531 12.2768578029363 12.2992406113962 11.5277037066388 0.06171698878993 0.0606901952462118 0.0606901952462118 0.0619902260782822 0.0628483429101402 0.0638154203937271 0.0620816764161574 0.0606901952462118 0.0703756781426421 0.0610719180602051 0.0607262503721321 0.0606901952462118 0.0606901952462118 0.0656678691227623 0.0621100736827088 0.0613833762668474 0.0692587945177118 0.0625135095550966 0.0633084855379712 5 0|5 /|+ 25766689 25767381 25766935.75 25766066 25767615 + gene protein_coding_gene TRUE TRUE AT5G64400.1|AT5G64400.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09570.1); similar to Os03g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050926.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1); contains InterPro domain CHCH; (InterPro:IPR010625)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09570.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1) 0.739785563942507 8.29103353989362 5.98251221800395e-06 0.000181514994915785 12.4366367753795 24.1740050165032 0.739785563942507 0.0663944305225806 AT5G14880_at 7.53154192642902 7.49492787729166 8.50256718163465 8.56702200955593 8.67952192865976 8.48433413426805 8.02814706342432 8.20693594285241 7.52235107754758 8.01081462343871 8.37365694927477 8.33414059316978 8.64688563494192 8.45779248598443 8.2766862813655 8.79845950618817 8.43892672181147 8.11660957476857 7.78144211803217 0.132659032277144 0.130194108967442 0.128996166001519 0.133537847186697 0.132570596459352 0.141359399550178 0.131935921429557 0.133454874867694 0.134364546546478 0.135770943076894 0.128697405188768 0.132501708406478 0.125538912725912 0.131279026470019 0.127447495161808 0.129586827855300 0.129980444345848 0.130610650021912 0.132527014788248 5 5 + 4817094 4817553 4817279.818 4814247 4817670 + gene protein_coding_gene TRUE TRUE AT5G14880.1 potassium transporter, putative Identical to Potassium transporter 8 (AtPOT8) (AtHAK8) (POT8) [Arabidopsis Thaliana] (GB:Q9M7J9;GB:Q9LEQ2); similar to KT2 (POTASSIUM TRANSPORTER 2) [Arabidopsis thaliana] (TAIR:AT2G40540.2); similar to KUP3 (K+ uptake permease 3), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT3G02050.1); similar to KUP6 (K+ uptake permease 6), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT1G70300.1); similar to putative potassium transporter HAK1p [Mesembryanthemum crystallinum] (GB:AAK53758.1); similar to putative high-affinity potassium transporter protein 1 [Nicotiana tabacum] (GB:ABI14646.1); similar to putative high-affinity potassium transporter protein [Phytolacca acinosa] (GB:AAX13997.1); contains InterPro domain K+ potassium transporter; (InterPro:IPR003855) 0.700915944897751 8.28894889618193 5.996488198109e-06 0.000181811809077004 12.4344143203490 16.2878400870699 0.700915944897751 0.0475691833652287 AT5G23010_at 12.7087944598272 12.6687978683354 12.8917615829667 12.9061535392758 13.0471015013864 13.0634157333704 12.7282168782121 12.7682827648994 11.3220086331754 12.7991838602417 13.257804030521 12.8648244544619 13.086213944003 13.3414797088318 12.6613564517042 12.8787867095053 13.3156286870877 13.3406709603444 11.9768523336277 0.0718423435110767 0.0700974584883434 0.0709702953341709 0.0706812565180016 0.0715179549775956 0.0725480395756975 0.0700974584883434 0.0700974584883434 0.0773843030164626 0.0728667364970242 0.0702442437395567 0.0709915448508719 0.0700974584883434 0.0727098262141634 0.0726959364702685 0.0734353580647002 0.0701750004802046 0.0722889273859915 0.0739054155561126 5 5|0 +|/ 7705455 7706744 7706093.556 7703095 7706894 + gene protein_coding_gene TRUE TRUE AT5G23010.1 MAM1 (2-isopropylmalate synthase 3); 2-isopropylmalate synthase Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates. similar to MAM-L (METHYLTHIOALKYMALATE SYNTHASE-LIKE), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT5G23020.1); similar to methylthioalkylmalate synthase a [Boechera divaricarpa] (GB:CAJ55512.1); similar to methylthioalkylmalate synthase b [Boechera divaricarpa] (GB:CAJ55513.1); similar to 2-isopropylmalate synthase [Brassica oleracea] (GB:AAV25874.1); contains InterPro domain Pyruvate carboxyltransferase; (InterPro:IPR000891); contains InterPro domain Alpha-isopropylmalate/homocitrate synthase; (InterPro:IPR002034) 0.659624552861899 8.28642343515565 6.01346684858407e-06 0.000182140938131191 12.4317212026947 25.4108291546953 0.659624552861899 0.0104955694464753 AT5G40670_at 10.5705066519836 10.8538639968450 11.5620742919705 11.4824586725063 11.5766458999048 11.1727079825397 10.9240491928136 10.7634165856873 9.56467888240915 10.2392883398855 10.9501652549664 10.5133923187676 11.0271271665666 11.0911483847255 10.4485419578430 10.9889378321395 10.9545184906475 10.7190308831309 9.8933025889599 0.105560130195297 0.105879720342401 0.110332021579799 0.108891988843316 0.108466748311835 0.108218159646992 0.105560130195297 0.110528952604526 0.140227412679571 0.110262721370454 0.107481283848300 0.105834353331392 0.105560130195297 0.113501078787325 0.115415665796008 0.105633472878938 0.119621019430553 0.125556293569869 0.111292613836279 5 5|0 +|/ 16303839 16304782 16304241.7 16302939 16305021 + gene protein_coding_gene TRUE TRUE AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein Identical to Cystinosin homolog [Arabidopsis Thaliana] (GB:P57758); similar to Lysosomal Cystine Transporter family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97107.2); contains InterPro domain Cystinosin/ERS1p repeat; (InterPro:IPR006603); contains InterPro domain Lysosomal cystine transporter; (InterPro:IPR005282) 0.804015226955746 8.2860851088775 6.01574535927083e-06 0.000182140938131191 12.4313603575203 21.481064270873 0.804015226955746 0.0908493649943176 AT5G53350_at 10.6881619268652 10.6746544036843 11.6595774347349 11.6586165209587 11.7310395905336 11.4263183201553 11.0502174884 10.8877353575285 10.6546180178774 10.8122406565692 11.3240880004555 11.137059552547 11.5766833502071 11.4607626263683 11.0315853101082 11.7317820033591 11.5840095553652 11.4918002402324 10.8210963911658 0.0827357098769351 0.082000120842252 0.0838244546985309 0.0820184597885283 0.0805208579899827 0.0878713324452755 0.08340579109771 0.0833411663958693 0.0875263488271372 0.0805208579899827 0.0818856421999755 0.081568721091573 0.0805511503094677 0.0884361846529633 0.086268830124511 0.0805208579899827 0.084846763704618 0.084444466287594 0.0818459532714575 5 5|0 +|/ 21663717 21664700 21664276.4 21661124 21664933 + gene protein_coding_gene TRUE TRUE AT5G53350.1 CLPX (Clp protease regulatory subunit X); ATPase CLP protease regulatory subunit CLPX mRNA, nuclear gene similar to ATP-dependent Clp protease ATP-binding subunit ClpX, putative [Arabidopsis thaliana] (TAIR:AT1G33360.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD21479.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD15818.1); similar to ClpX, ATPase regulatory subunit [Medicago truncatula] (GB:ABE81693.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ClpX, ATPase regulatory subunit; (InterPro:IPR004487) 0.724132656884521 8.2806789382184 6.05228099729949e-06 0.000183119264520249 12.4255924753152 22.3119766395414 0.724132656884521 0.0598075696359076 AT5G09320_at 5.37923184136506 5.75564692093971 6.06607844803746 6.10146385588575 6.83983329937706 6.6016123197181 5.29093512708215 5.79681939745590 4.72521234245062 4.36756797497653 5.36292635684705 5.07099770128261 5.93139330639885 5.82587472463562 5.24083697568469 5.45245056427271 5.67205125448196 5.34794959689508 4.59484168151577 0.235579890218777 0.228257364949549 0.228750004412419 0.239587196932818 0.241341281014942 0.243920418603013 0.226202494867767 0.231493591193658 0.232804065842101 0.231808470738297 0.223050286647465 0.226300291319422 0.228998983896069 0.227275867438275 0.225207035990812 0.223050286647465 0.229550423406185 0.228968561702277 0.231105155496437 5 5 - 2889152 2889600 2889416.091 2888656 2892017 - gene protein_coding_gene TRUE TRUE AT5G09320.1 vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein similar to vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19770.1); similar to Vacuolar sorting protein 9 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95105.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Vacuolar sorting protein 9; (InterPro:IPR003123) 0.886054026395949 8.27936217819945 6.06121613769726e-06 0.000183261721513665 12.4241870790059 11.0042530144210 0.886054026395949 0.116809791834599 AT5G18140_at 8.54797948429563 8.61972653800973 9.2633296556992 9.3184943717004 9.97111208317372 9.80322774358594 8.7547753571664 8.37056798249456 9.39338207565985 9.0896655609128 9.94011351514125 9.5059302374552 9.58114736625998 9.68498921179556 9.6370868217061 9.96806427199872 9.83004485259798 9.87250999544489 9.2790993677462 0.138434045244338 0.132816509293454 0.137669691311176 0.135504098744190 0.133923515517988 0.132759269723730 0.135417147567306 0.136821905590890 0.140193848840943 0.128962855164549 0.132703006291729 0.132523953158112 0.134505590619361 0.137201651989055 0.130350207832299 0.134657011140133 0.132376926016280 0.132679280381330 0.132552379845330 5 5 + 5999163 5999616 5999417.545 5998177 5999890 + gene protein_coding_gene TRUE TRUE AT5G18140.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT3G17830.1); similar to Putative DNAJ protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05335.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.757107702829289 8.27152831753563 6.11467015802383e-06 0.000184749076547023 12.4158215505089 18.5844190447605 0.757107702829289 0.0742304145070801 AT5G10560_at 9.12502875314482 9.4048751344777 9.21841451326242 9.41690796401684 9.80844667958844 9.65836074279514 8.75704286454457 8.53157892848045 8.7188865930615 8.48631152574537 9.89515404959548 9.90563187731 9.1668884420739 9.6388270133013 9.54736759340333 9.40940294824786 9.27751576007174 9.50143985355747 8.57269003394103 0.135203975740550 0.131613595021245 0.131613595021245 0.133793531891092 0.131613595021245 0.137342726821356 0.132642094486212 0.141160975023848 0.156567516025979 0.153964343193478 0.133730980896276 0.136025457585683 0.146014587032166 0.141250708272166 0.143814410937165 0.131613595021245 0.146059489937186 0.146805984584085 0.1473105019504 5 5 - 3336345 3336899 3336626.455 3336256 3339367 - gene protein_coding_gene TRUE TRUE AT5G10560.1 glycosyl hydrolase family 3 protein similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT1G78060.1); similar to Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX96800.1); similar to beta-D-xylosidase [Oryza sativa (japonica cultivar-group)] (GB:AAX92971.1); similar to beta-D-xylosidase [Hordeum vulgare] (GB:AAK38482.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.760525056349828 8.26938714931121 6.12936888912513e-06 0.000184996381467781 12.4135337719749 18.307785860761 0.760525056349828 0.0756455611391312 AT5G19630_at 7.50497506839663 7.14009791246724 8.18335420063097 8.18654189237286 8.50526806634867 8.20871568902645 7.70384942307789 7.67432066920813 6.77048886044802 6.77396413178816 7.84066496687619 7.44582397062488 7.4590991623454 7.7502268520998 7.55440218072243 7.67902099254396 7.96212787885054 7.89209951528021 7.18846658360837 0.258008578218622 0.248368530002033 0.252302278308043 0.257651771640359 0.254816862297983 0.261149969899384 0.238451270755006 0.238451270755006 0.298209339433141 0.264810042076669 0.282171037998657 0.238451270755006 0.239721945976311 0.263334085322873 0.257334008792274 0.238451270755006 0.238451270755006 0.238451270755006 0.240583428205097 5 5 - 6629615 6629796 6629694.6 6627977 6629997 - gene protein_coding_gene TRUE TRUE AT5G19630.1 similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABE92731.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.776059595888505 8.26909333579122 6.13138884527206e-06 0.000184996381467781 12.4132197970700 15.1928435561242 0.776059595888505 0.0815307447941866 AT5G01230_at 5.44821434067707 5.29959585169069 5.81254133927603 6.3464793929483 5.53871977333111 5.88106541295226 4.39910141886009 4.90353207475882 4.04847557720571 4.5467508241302 5.36681818320823 5.81477467145522 5.68075172799222 5.82932983338978 5.57869849110248 5.22970874126438 5.60805410151725 5.29144641696873 4.84024218587753 0.245420364516746 0.248002483949532 0.251707298305979 0.248866860183562 0.257457090884751 0.260546213486990 0.250903045396082 0.253360997837135 0.264316684413733 0.260148411590504 0.251069092299212 0.245420364516746 0.251622859271067 0.253318613097095 0.245420364516746 0.245420364516746 0.252492047757642 0.245420364516746 0.255684488891765 5 5|0 -|/ 92830 94102 93413.333 92600 95700 - gene protein_coding_gene TRUE TRUE AT5G01230.1|AT5G01230.2 FtsJ-like methyltransferase family protein similar to FtsJ-like methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G25730.1); similar to Ribosomal RNA methyltransferase RrmJ/FtsJ [Medicago truncatula] (GB:ABD28674.1); contains InterPro domain Ribosomal RNA methyltransferase RrmJ/FtsJ; (InterPro:IPR002877) 0.976774399960701 8.2610395044217 6.18703989693406e-06 0.000186545670008254 12.4046092387499 10.4678748505285 0.976774399960701 0.142581513839349 AT5G37680_at 6.9588691297697 7.10777190682388 7.99565026239154 8.29787690336154 8.37575256819994 8.11218436748463 7.7454644245977 8.08341119989183 6.33950626784483 7.04359510224577 7.76274411080438 7.77461465906508 7.83714346565863 7.74221825884277 7.6458465338275 7.82030469820155 7.73625666813036 7.54549381925276 7.11267448628358 0.200120075393579 0.195486741559852 0.203324111174572 0.196389676210546 0.201190135961083 0.201933089473307 0.201977659268201 0.199906107890646 0.210209802786046 0.209596900465252 0.194375504666456 0.192558490365647 0.200419637417906 0.195461718876137 0.194866991128957 0.200042008731149 0.204681796481317 0.204690609747721 0.207020361155014 5 5|0 -|/ 14987027 14988304 14987382.625 14986826 14988542 - gene protein_coding_gene TRUE TRUE AT5G37680.1 ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. similar to ATARLA1D (ADP-ribosylation factor-like A1D), GTP binding [Arabidopsis thaliana] (TAIR:AT5G67560.1); similar to Os02g0732500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048027.1); similar to PREDICTED: similar to ADP-ribosylation factor-like 10C [Danio rerio] (GB:XP_690918.1); similar to Os03g0200800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049292.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.811319675676725 8.25489363999623 6.22987454586141e-06 0.000187602758357399 12.3980332431525 15.1171241264056 0.811319675676725 0.0943408573338468 AT5G26600_at 6.90601892691255 7.2158499541305 7.9444920658178 7.8094281358254 7.54146101462718 7.41389121909866 6.65250553407043 6.83817290621427 6.51206905089352 6.51435331474506 6.9892891975404 7.35334993507295 7.35485761596752 7.3832723174382 6.81863240038752 7.41760623989168 7.35983015177379 7.56060337242219 6.66032011406801 0.166900008486364 0.158217271446901 0.161533690204178 0.157700506206180 0.159478553672821 0.163054126223631 0.159819340696257 0.157453022860353 0.172286222045316 0.155111371712683 0.151409139054360 0.154373983235896 0.157063938037894 0.156474766573593 0.157520492377803 0.152773189807485 0.164132426270502 0.158507065203894 0.159093081790025 5 5 + 9378302 9378853 9378563.818 9377405 9379800 + gene protein_coding_gene TRUE TRUE AT5G26600.1|AT5G26600.2 transaminase similar to epimerase-related [Arabidopsis thaliana] (TAIR:AT3G62130.1); similar to Putative isopenicillin N epimerase, identical [Solanum demissum] (GB:AAT39966.1); contains InterPro domain Aminotransferase, class V; (InterPro:IPR000192) 0.745806969543288 8.25476800926573 6.23075348857431e-06 0.000187602758357399 12.3978987720696 14.2111912931108 0.745806969543288 0.0702917191300683 AT5G62530_at 6.70305861719824 6.58167770299008 7.89036496682167 7.92804044247664 7.96218616436363 7.26015620549289 7.56929846079422 7.1465995268329 5.53307876916032 6.6806555348593 7.50676493870876 7.54976934351238 7.0471064436141 7.50784960963792 7.22815860461392 7.19050245177965 7.64124141399138 7.00301519168521 6.19798829303233 0.171416709609466 0.174056467400301 0.172090377720757 0.17318645139132 0.170249970842523 0.181463225070097 0.170385945773009 0.171090431123938 0.185417611535361 0.182823945034883 0.171560860984574 0.172746527863340 0.169182378153633 0.169747204496945 0.183532173893777 0.177078473824223 0.177758496616301 0.190197935369271 0.187743990802574 5 5|0 -|/ 25116999 25117878 25117440.889 25116229 25120524 - gene protein_coding_gene TRUE TRUE AT5G62530.1 ALDH12A1 (Aldehyde dehydrogenase 12A1); 1-pyrroline-5-carboxylate dehydrogenase/ 3-chloroallyl aldehyde dehydrogenase Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. Identical to Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase) (AtP5CDH) (Aldehyde dehydrogenase 12A1) (ALDH12A1) [Arabidopsis Thaliana] (GB:Q8VZC3;GB:Q93Y55;GB:Q9FJJ2); similar to ALDH7B4 (ALDEHYDE DEHYDROGENASE 7B4), 3-chloroallyl aldehyde dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G54100.2); similar to Aldehyde dehydrogenase; Carbamoyl-phosphate synthase L chain, ATP-binding [Medicago truncatula] (GB:ABE84468.1); similar to Probable aldehyde dehydrogenase (Flax-inducible sequence 1) (GB:Q40255); similar to putative aldehyde dehydrogenase WIS1 [Triticum aestivum] (GB:AAL70109.1); contains InterPro domain NAD-dependent aldehyde dehydrogenase; (InterPro:IPR012303); contains InterPro domain Aldehyde dehydrogenase; (InterPro:IPR002086) 0.978544250921887 8.2465261257284 6.2887096989871e-06 0.000189123769688151 12.3890727371845 14.1159436935597 0.978544250921887 0.143507422380135 AT5G28020_at 10.1742275268467 10.1444623140158 11.4548634899965 11.3559606609527 11.7894465859706 11.3018381236946 10.9809105262684 10.7321553906135 10.7037976938504 10.7647918977575 11.4671172430839 11.0265764179323 11.4851444876961 11.4648214787023 10.8828803446970 11.7395863749382 11.5844732247967 11.3254456200031 10.6501906305859 0.0863480282279233 0.0834662864902098 0.0853988722900483 0.0856048462064374 0.0812037203873544 0.0855272791192222 0.0836750013294945 0.0887169763697729 0.0894995382952611 0.0856035425647176 0.0825663249342698 0.0813944926381153 0.0835685351619917 0.083707228135769 0.0851154591433776 0.0810844907856433 0.0855683498408088 0.0864980147787744 0.084528642707187 5 5|0 -|/ 10026583 10027554 10027149.111 10026187 10028584 - gene protein_coding_gene TRUE TRUE AT5G28020.1|AT5G28020.2|AT5G28020.3|AT5G28020.4|AT5G28020.5|AT5G28020.6 ATCYSD2 (Arabidopsis thaliana cysteine synthase D2); cysteine synthase|ATCYSD2 (Arabidopsis thaliana cysteine synthase D2) Encodes cysteine synthase AtcysD2. similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.1); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926); contains InterPro domain Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; (InterPro:IPR001216); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859)|similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.1); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926) 0.816666925317058 8.246142028267 6.29142481820397e-06 0.000189123769688151 12.3886612151481 22.0308659388177 0.816666925317058 0.0964007474264992 AT5G49990_at 4.44760064479115 5.57530001828711 5.2328712169791 5.88568004390404 7.16108956555404 6.75866124230863 3.79491597014147 3.89900300033291 3.54484265852245 4.06656722280211 4.45914511347766 4.75013497518043 5.33079138452874 5.12280115487113 3.80316972927346 5.23849537122588 5.35649671813237 4.17917390601062 4.01931959324748 0.282846317310828 0.271427357842723 0.280784357853104 0.277085519880779 0.283887695509452 0.28148323923904 0.28719094803224 0.275253208821026 0.275659385797027 0.273258968650723 0.271427357842723 0.274060609845424 0.276649606191535 0.292570618763176 0.277233785137926 0.273017309316688 0.287787308201618 0.272529917712328 0.274320974687053 5 0|5 /|- 20355090 20355616 20355347 20354867 20359107 - gene protein_coding_gene TRUE TRUE AT5G49990.1 xanthine/uracil permease family protein Identical to Nucleobase-ascorbate transporter 5 (AtNAT5) (NAT5) [Arabidopsis Thaliana] (GB:Q8RWE9;GB:Q9FGR4); similar to permease [Arabidopsis thaliana] (TAIR:AT5G62890.3); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G60030.1); similar to Xanthine/uracil/vitamin C permease; Thioredoxin-related [Medicago truncatula] (GB:ABE83225.1); similar to root uracil permease 1 [Oryza sativa (japonica cultivar-group)] (GB:CAJ84113.1); similar to putative permease I [Lycopersicon esculentum] (GB:AAX73299.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) 1.36674341401424 8.24572756199673 6.29435603134898e-06 0.000189123769688151 12.3882171358516 9.67285814725974 1.36674341401424 0.236689686345816 AT5G05930_at 8.47315342374088 8.29195593875997 9.1322576607772 9.12016255747365 9.51004315130722 9.23555215011724 8.57058489160697 8.20378890177784 7.89960192130683 7.92099404235373 8.77809137074021 8.4600141695272 8.45568131246271 8.49438584860427 8.32229971609514 8.74053599100927 8.97072562835384 8.70401391076191 7.9158532505357 0.119166370698587 0.117618788130288 0.124056131622576 0.122368688143788 0.125839502969459 0.119335306765552 0.115828430476582 0.119397890402244 0.131586672837539 0.130546989002187 0.123936894826188 0.120042149539649 0.120803441973195 0.126818366664563 0.132602066674152 0.115828430476582 0.121569341390343 0.123973543707717 0.126272719576435 5 5|0 -|/ 1780423 1782304 1781458.556 1779975 1783413 - gene protein_coding_gene TRUE TRUE AT5G05930.1|AT5G05930.2 guanylyl cyclase-related (GC1) similar to guanylyl cyclase [Glycine max] (GB:ABK15530.1) 0.784100923163155 8.24475025681982 6.30127363589775e-06 0.000189136817646260 12.3871699209296 17.0811214502 0.784100923163155 0.085283372954032 AT5G13960_at 2.44781648000303 2.55701697133615 3.29360969161955 3.4973074422379 3.09290135369072 2.72799635867642 2.54284524352471 2.34656690541404 2.21993210648138 2.32550182706346 2.85119271089336 3.08150304858645 3.28020804665888 3.61165409993207 3.45853042457643 3.1563900085898 3.24579398613080 2.98809118767032 2.46843043523883 0.189268827019433 0.193354722309435 0.198211034461228 0.196503673777469 0.187466965562454 0.207721421992770 0.191053053614064 0.194830083735309 0.192563904183056 0.201047111268123 0.192726133509688 0.190318116797676 0.192084543963544 0.187466965562454 0.194225938593944 0.188638266292616 0.197895754006297 0.191779856061043 0.193976256053151 5 5|0 +|/ 4505020 4505932 4505626.875 4501449 4506190 + gene protein_coding_gene TRUE TRUE AT5G13960.1 SUVH4 (SU(VAR)3-9 HOMOLOG 4) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and this subfamily of the SET proteins have an additional conserved RING finger motif called YDG domain. In kyp mutants, there is a loss of CpNpG methylation. Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4) (Suppressor of variegation 3-9 homolog protein 4) (Su(var)3-9 homolog protein 4) (Protein KRYPTONITE) (Protein SET DOMAIN GROUP 33) (SUVH4) [Arabidopsis Thaliana] (GB:Q8GZB6;GB:Q9C5P3;GB:Q9FFX9); similar to SUVH6 (SU(VAR)3-9 homolog 6) [Arabidopsis thaliana] (TAIR:AT2G22740.1); similar to putative SUVH4 [Oryza sativa (japonica cultivar-group)] (GB:BAB89674.1); similar to Os01g0927000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045266.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain Pre-SET; (InterPro:IPR007728) 0.775303980510937 8.24443386758764 6.30351487732905e-06 0.000189136817646260 12.3868308744884 5.58682017017497 0.775303980510937 0.0821049754663511 AT5G04870_at 5.55066611985345 5.63342686029714 6.25587367161133 6.06184397997069 6.62674923214367 6.08598276147102 5.28395773443824 5.15431606168131 5.79905822876721 5.53104779126862 7.11000940938328 7.10632088438107 5.98606887616834 6.60573411350078 6.52280751608448 6.41575334508537 5.64492725949302 6.47177829367353 5.65621894401781 0.211134967863096 0.204894213466026 0.202941196626001 0.206913929434972 0.211858497979987 0.221857961784769 0.208772868828804 0.211418540794534 0.220409520617763 0.20605634533285 0.209720732714271 0.208743940125958 0.202452715793675 0.204489196798397 0.209064291243611 0.20123896499804 0.217741242195082 0.207203726755506 0.204958283601044 5 5 - 1417016 1418245 1417632.727 1416784 1420339 - gene protein_coding_gene TRUE TRUE AT5G04870.1 CPK1 (calcium-dependent protein kinase isoform AK1); calcium- and calmodulin-dependent protein kinase/ kinase A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. Identical to Calcium-dependent protein kinase, isoform AK1 (EC 2.7.11.1) (CDPK) (AK1) [Arabidopsis Thaliana] (GB:Q06850); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), anion channel/ calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to CPK20 (calcium-dependent protein kinase 20), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G38910.1); similar to calcium-dependent protein kinase 3 [Nicotiana tabacum] (GB:CAC82999.1); similar to calcium-dependent protein kinase 2 [Nicotiana tabacum] (GB:CAC82998.1); similar to putative calcium-dependent protein kinase 2 [Isatis tinctoria] (GB:ABE73345.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.836418679050833 8.24155947029789 6.3239160998356e-06 0.000189617732509942 12.3837500787434 11.9041186944696 0.836418679050833 0.102924936062003 AT5G49530_at 7.27153350989472 7.38693227996437 7.59382076198769 7.98746680402871 7.98249905864971 7.67880890348993 6.61673659736392 6.81630047298586 6.76027688276713 6.26459797484978 6.9663976447598 7.30055809680271 7.43897255726633 7.23856268727822 7.1950789105083 7.38880131402623 7.41989452252107 7.42650702876271 6.3604152277765 0.171717363784886 0.168159502163248 0.172501810717659 0.166941573387917 0.177868593193018 0.173806126648667 0.181805528409253 0.168620676650438 0.181082822839811 0.183032375574586 0.170759861754736 0.166947241826032 0.168469457302648 0.168924772456893 0.168558408410199 0.165660284736969 0.177792250527423 0.173668709456685 0.170879623125188 5 0|5 /|+ 20120928 20121268 20121075.5 20117805 20121673 + gene protein_coding_gene TRUE TRUE AT5G49530.1 SIN-like family protein similar to BAC19.10 [Lycopersicon esculentum] (GB:AAG01125.1); contains InterPro domain Sin-like protein conserved region; (InterPro:IPR006886) 0.811428200214831 8.24085569345942 6.32892207573593e-06 0.000189636687121634 12.3829956134980 14.2960672770649 0.811428200214831 0.0948376715300573 AT5G49650_at 9.13711499237865 9.10963788529588 9.63282709805578 9.65057297890847 9.62908660087056 9.63060343094423 8.7141802977601 8.78306349510783 8.79836345530716 9.13777027815018 9.68593228586322 9.46827504582762 9.49781364951047 9.58694540114908 9.5971357571627 9.42963188633115 9.41667836466278 9.71279319043058 8.86831468472343 0.111807905179826 0.111906432608293 0.108726743786801 0.110420433094091 0.117977734264831 0.110999275169634 0.114913343902633 0.117628969255452 0.129684643116418 0.119610201930995 0.108629379607291 0.112605880201058 0.110000297089614 0.113446789498979 0.109765084307012 0.112787180449430 0.115729445285562 0.107679652040006 0.121256972151726 5 5|0 +|/ 20171985 20172716 20172399.556 20170007 20172994 + gene protein_coding_gene TRUE TRUE AT5G49650.1|AT5G49650.2 xylulose kinase, putative similar to Carbohydrate kinase, FGGY [Medicago truncatula] (GB:ABE93144.1); similar to Os12g0633000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067349.1); similar to Os07g0640200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060421.1); contains InterPro domain Carbohydrate kinase, FGGY; (InterPro:IPR000577)|similar to Carbohydrate kinase, FGGY [Medicago truncatula] (GB:ABE93144.1); contains InterPro domain Carbohydrate kinase, FGGY; (InterPro:IPR000577) 0.65717895889138 8.23997204865483 6.33521352408872e-06 0.000189694106212630 12.3820482402672 18.5279942659206 0.65717895889138 0.0131988683758471 AT5G53180_at 8.3689657161032 8.24665176566392 8.81121748530058 8.60799428195573 9.17637936857298 9.00951886180624 8.15260614705326 8.02696160510283 7.95102345995031 8.16742294852802 8.95040033091673 8.95037387450083 8.7781353053537 8.92800784195418 8.7179118270058 9.0688444682016 8.6956057170785 8.60692236270249 8.24035455763873 0.120894599711545 0.119744318570459 0.125751104815152 0.121680760806275 0.121390908620543 0.119123230409308 0.119871308577808 0.124159591421512 0.130957179603519 0.123165503045179 0.124940202741984 0.117165868667745 0.122254545901237 0.120576289376957 0.12157847646249 0.117833154258315 0.124291189064699 0.123597763593652 0.12043864647218 5 5|0 -|/ 21585620 21586331 21585834.8 21585426 21589128 - gene protein_coding_gene TRUE TRUE AT5G53180.1|AT5G53180.2 polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative Identical to Polypyrimidine tract-binding protein homolog 2 [Arabidopsis Thaliana] (GB:Q9FGL9); similar to PTB (POLYPYRIMIDINE TRACT-BINDING), RNA binding [Arabidopsis thaliana] (TAIR:AT3G01150.1); similar to polypyrimidine tract-binding protein-like [Solanum tuberosum] (GB:ABB55397.1); similar to Os03g0376900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050223.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Polypyrimidine tract-binding protein homolog 2 [Arabidopsis Thaliana] (GB:Q9FGL9); similar to PTB (POLYPYRIMIDINE TRACT-BINDING), RNA binding [Arabidopsis thaliana] (TAIR:AT3G01150.1); similar to Os08g0436000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061885.1); similar to RNA-binding re (GB:ABE82469.1); similar to Os03g0376900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050223.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) 0.709953042426643 8.23862973495835 6.34478358519086e-06 0.000189849549183931 12.3806089372105 17.0283496729465 0.709953042426643 0.0546944056029825 AT5G48180_at 8.48256061892761 8.38974976320232 9.8266917322835 9.62726301914512 8.84355067513664 8.86497215961515 8.55916471968595 8.69073010528523 8.34303084787616 8.50246522140353 8.81127735658202 8.61414549812678 8.89305324568504 9.0554776994682 8.59350170392057 9.17289404714716 9.39542329234729 8.90932843464104 8.0791198291294 0.111675778453363 0.105850051791900 0.108278626344873 0.111615604001742 0.104675686912372 0.112210582759361 0.105798981622671 0.108490701106400 0.105377931927451 0.11034922483508 0.105701219735769 0.104398123189123 0.107530918581227 0.110564192150147 0.109828947432236 0.107266870796894 0.109384562277205 0.104398123189123 0.111098014998271 5 5 - 19558517 19559033 19558756.909 19558163 19559652 - gene protein_coding_gene TRUE TRUE AT5G48180.1 kelch repeat-containing protein similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07720.1); similar to putative D-protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19903.1); similar to Os09g0249000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062670.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.691250227519946 8.23619535294733 6.36217948454506e-06 0.000190238782142543 12.3779980986833 17.5300068287649 0.691250227519946 0.0445103852690488 AT5G61360_at 2.77025559588159 2.69906313654241 2.95012973567597 3.47532191565509 3.55372109677084 3.46351800859698 1.49234868199300 1.76256486914097 1.08417272561354 1.67184762173860 2.0939953581492 1.63216946170257 1.74318416865406 2.20407294708735 1.80333728785313 2.04057162923907 2.63178005130503 2.16479038760332 1.86328252319168 0.266742424466464 0.267725655539573 0.276192228802963 0.273589157554137 0.260875206699811 0.269750312890186 0.258043407592638 0.259561437126561 0.264061474395097 0.272893376585103 0.252858248675538 0.251721236851497 0.252833849160892 0.255583885491157 0.260709857890446 0.251734063765179 0.251721236851497 0.255536399491642 0.255863383277221 5 5 + 24688321 24688953 24688544.4 24688240 24689094 + gene protein_coding_gene TRUE TRUE AT5G61360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07730.1) 0.83954232810992 8.23478502441089 6.37228116946081e-06 0.000190283110597326 12.3764852123183 4.56036802251402 0.83954232810992 0.104127809042554 AT5G16800_at 8.13063896880031 8.32387252936797 9.0192070281239 8.87494149029786 9.64150618040749 8.96106933628455 7.66989445414888 7.11352347876642 8.17776607552597 7.1450675764734 8.62299023426035 8.2303050755005 8.43461343513806 8.51027137727869 7.89275118717647 8.92433555850109 8.27339052463656 8.75708464508918 7.79764813048181 0.188474220123743 0.188146354059197 0.197415855675360 0.184955866864322 0.187315492636355 0.183008438984223 0.184551594712342 0.185188585808609 0.198552313437663 0.19583998365327 0.181305067665905 0.188354066206813 0.184054185338147 0.204385696261489 0.191309936239788 0.185456237017079 0.185359094287956 0.184596474463001 0.186639237989484 5 5 - 5524556 5525913 5524900.727 5524317 5526592 - gene protein_coding_gene TRUE TRUE AT5G16800.1|AT5G16800.2 GCN5-related N-acetyltransferase (GNAT) family protein similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT3G02980.1); similar to GCN5-related N-acetyltransferase [Medicago truncatula] (GB:ABE94715.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 1.03179457243905 8.2346827419887 6.37301445654711e-06 0.000190283110597326 12.3763754825934 16.548104191037 1.03179457243905 0.157726269571355 AT5G27750_at 3.29089214802899 3.31348584318921 4.39719771951571 4.45977338323563 5.37492999494685 4.32942018089179 3.607800135177 3.18894635859919 3.21480696971428 3.30471411695698 4.19158395839976 4.26590200228147 4.47951618136978 4.3023410433304 3.99656522616964 4.35331016474294 3.97333227732277 4.24974802751493 2.92103539379948 0.234097876928934 0.232034079897288 0.238763420675888 0.243035770451273 0.235524682562099 0.241544657824788 0.229461461008144 0.229469604429049 0.237604953950844 0.233556604177437 0.231365425478129 0.229574405579992 0.233500565954228 0.229907060533459 0.232135450557318 0.228750366549259 0.230147118434598 0.233035520377783 0.240365329096390 5 5 + 9829261 9829943 9829661.364 9828241 9830165 + gene protein_coding_gene TRUE TRUE AT5G27750.1 F-box family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13780.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.18486719919173 8.23403895865164 6.37763198801067e-06 0.000190283110597326 12.3756847954030 7.68200048059723 1.18486719919173 0.195249490710924 AT5G44860_at 5.74327692889822 6.18814567683398 7.02291244385992 7.79270332657461 8.10109182808556 7.57063338836555 5.89746519304292 6.57630503623991 5.50469395650756 5.6457616253366 6.47031035364712 6.62073906013154 6.80131639318357 6.6391513838853 6.62013884826977 7.24155636987273 6.96582272447741 6.79566618484497 6.12237474059753 0.235030904481404 0.231737834178301 0.241198085063535 0.234457067764915 0.234149398873252 0.231918165061060 0.237354376030340 0.237266009189734 0.248484098031933 0.230485575894850 0.229505637321774 0.226557283392896 0.227279132834836 0.233657298080143 0.235508048709254 0.226557283392896 0.237113388286986 0.232164863159802 0.230584696260479 5 5 - 18127952 18128479 18128232.455 18127685 18129039 - gene protein_coding_gene TRUE TRUE AT5G44860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19950.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90086.1); contains domain gb def: Hypothetical protein AT4g16850 (PTHR22597:SF10); contains domain FAMILY NOT NAMED (PTHR22597) 1.26613229763807 8.2335394927023 6.38121689618895e-06 0.000190283110597326 12.3751489053126 13.1250406138724 1.26613229763807 0.214245300854600 AT5G55640_at 6.99764254554357 7.22365815246004 7.93883927469654 7.81775142314778 8.38565891413867 8.38713635027412 7.81540625734782 7.71085338857647 6.90472547479677 7.4511297398935 7.71546236929386 8.22879090971907 7.67306313072825 7.9396317675192 7.98853463325239 7.73311053560948 8.21198244365035 7.78376952106405 7.27784533370495 0.172337111492625 0.166927861433043 0.178124840931638 0.175471593288103 0.168791032777213 0.175600788396635 0.170738393277905 0.176110725898298 0.171324761055364 0.182801016774449 0.170404802678574 0.168521776831346 0.170511554204948 0.173533883216829 0.167592565236353 0.182809479182814 0.186519005680779 0.172533598264993 0.179682456777176 5 5|0 -|/ 22550470 22551111 22550674.9 22550385 22551343 - gene protein_coding_gene TRUE TRUE AT5G55640.1 similar to Os03g0412200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050353.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAO37502.2); similar to Os03g0595200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050595.1) 0.696758026152572 8.23248123882446 6.38881969655709e-06 0.000190378885828052 12.3740133766713 15.3448816282663 0.696758026152572 0.0479204605420077 AT5G47690_at 8.31114626654464 8.4553698199414 8.65205047235314 8.96228876189461 9.16189967317797 8.99216397534444 8.1929993755292 8.03029281701214 8.29173618579649 8.11788056578182 9.09364250691506 9.2963548549771 8.9110349135578 9.21768298080427 9.05999558467765 9.39650775022919 9.10428667496346 8.9931841439863 8.59733564219532 0.188894688678819 0.184370544349885 0.191085261485545 0.190604467277236 0.172226747755241 0.190978172469755 0.196976725522100 0.191361534425055 0.219431773398945 0.175911258634490 0.173942261744206 0.172226747755241 0.174743097962860 0.172226747755241 0.183517406593735 0.172251678105758 0.177469095793001 0.172226747755241 0.182317144400037 5 5|0 +|/ 19343405 19344070 19343803.2 19334951 19344556 + gene protein_coding_gene TRUE TRUE AT5G47690.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT1G77600.1); similar to putative Spo76 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69240.1); similar to hypothetical protein MtrDRAFT_AC149032g9v1 [Medicago truncatula] (GB:ABD28591.1); similar to hypothetical protein 26.t00005 [Brassica oleracea] (GB:ABD64989.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.746542014637503 8.22111824625379 6.47107478657837e-06 0.000192680769000039 12.3618120496885 17.3296448823189 0.746542014637503 0.0718399624923835 AT5G19500_at 5.9390742017943 5.83091868690236 6.97822384685986 6.953196282029 7.19021429222721 6.77650880439973 6.78516055256699 6.28079234114819 6.51472378499471 5.85352797584424 7.28287776308739 7.31997442716734 6.73480752704504 7.18975206120821 6.87927408765389 7.29316935641923 6.88021259423324 6.55165422857337 5.74570997689310 0.213001677071127 0.211208488828775 0.211312227494701 0.206860888944234 0.215330561739901 0.222048177731116 0.207468011494403 0.217451866712028 0.215428812429204 0.215016810264412 0.212416473410607 0.212075957981944 0.208360926177439 0.210108575845866 0.218726504451281 0.212984798418783 0.219008137288532 0.214852861998363 0.229910082187729 5 5|0 +|/ 6580893 6581611 6581267.111 6578954 6581947 + gene protein_coding_gene TRUE TRUE AT5G19500.1 tryptophan/tyrosine permease family protein similar to tryptophan/tyrosine permease family protein [Arabidopsis thaliana] (TAIR:AT2G33260.1); similar to Tryptophan/tyrosine permease family protein [Solanum demissum] (GB:AAT40501.1); similar to Os07g0662800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060546.1); contains InterPro domain Aromatic amino acid permease; (InterPro:IPR002091); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422) 0.872013685269382 8.22058603131562 6.47495538538361e-06 0.000192680769000039 12.3612401833733 13.1189873767830 0.872013685269382 0.114512445354158 AT5G58070_at 11.8105441846923 11.8529113010188 12.2931971719306 12.5040280106703 12.5071532574428 12.3010844211663 11.5041834053191 11.6909523400747 10.9603827709255 11.2154026781705 11.7000378655103 11.4692495302827 11.9505277086091 11.8136996247200 11.5768812895162 11.9621545543857 11.9035758199668 11.7525884937267 10.8577595104536 0.0707920950527825 0.0696780791980085 0.0725513207049966 0.0716683142587883 0.071853892480633 0.081187989924813 0.0726517263859373 0.0696780791980085 0.0777422927652205 0.0719971145448885 0.07344549419019 0.0709069939389712 0.0703417232042928 0.0735915901280458 0.0719887992305182 0.070620240060525 0.071326323747364 0.0726524487407704 0.0721168075070252 5 5 - 23517738 23518297 23518045.091 23517287 23518435 - gene protein_coding_gene TRUE TRUE AT5G58070.1 lipocalin, putative similar to temperature-induced lipocalin [Brassica napus] (GB:ABB02398.1); contains InterPro domain Calycin-like; (InterPro:IPR011038); contains InterPro domain Lipocalin-like; (InterPro:IPR013208); contains InterPro domain Lipocalin, bacterial and plant; (InterPro:IPR002446); contains InterPro domain Calycin; (InterPro:IPR012674) 0.720812807591375 8.21749342426381 6.4975547121001e-06 0.000193220661021055 12.3579164855339 23.4466422685508 0.720812807591375 0.0608384039748501 AT5G25610_at 12.1641599625092 12.6562956264138 13.5293321417854 13.5628711178102 13.6302381963494 13.7979179001158 13.3042396350093 13.4686993480659 13.2494990313542 13.2856655157977 14.4367489124680 14.0267057538726 14.208291623155 14.1061609278034 13.8031976468474 13.5474827443646 14.1087089499421 14.0828992082127 12.9324659673787 0.0701524536436967 0.0671998590366999 0.067011687835622 0.0674415594913843 0.0682552895079987 0.0688886178439778 0.0664133827982323 0.0676765938025196 0.0746997708393673 0.069893280742458 0.0664133827982323 0.0664133827982323 0.0664133827982323 0.0706877842207394 0.0668502817306876 0.0669691341708142 0.0748806541409204 0.067744185701448 0.0729388370953497 5 5 - 8914504 8915598 8914857.182 8914236 8916803 - gene protein_coding_gene TRUE TRUE AT5G25610.1 RD22 (RESPONSIVE TO DESSICATION 22) responsive to dehydration 22 (RD22) mediated by ABA Identical to Dehydration-responsive protein RD22 precursor (RD22) [Arabidopsis Thaliana] (GB:Q08298); similar to BURP domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G49320.1); similar to BURP domain-containing protein [Brassica napus] (GB:AAQ57584.1); contains InterPro domain BURP; (InterPro:IPR004873) 0.807944414335992 8.21431209549013 6.52089140006633e-06 0.000193714694640703 12.3544962188158 26.8621698955124 0.807944414335992 0.094546441011445 AT5G05920_at 4.34007537474733 4.35680735506865 5.01998534047744 5.40465318433234 5.31171262353447 4.53129249663307 3.94246742118808 3.75334413959507 3.60034978739381 3.08631251764635 4.38558678374745 4.23427801279139 4.18469369419034 4.49862019014143 4.28204680550247 4.39725783366011 4.67693971895787 4.38789840691391 3.27150415617865 0.237081255528753 0.229124465257046 0.249805627541753 0.236688585409745 0.241517018372957 0.252108980832402 0.231102309049338 0.241962060260431 0.241919664908169 0.236212963692602 0.241909629163113 0.239463578981446 0.237160737736003 0.233999080771461 0.235957534782538 0.229273742549568 0.236144559823004 0.235588365110977 0.237625442200891 5 5 - 1777829 1778953 1778403.455 1777548 1779827 - gene protein_coding_gene TRUE TRUE AT5G05920.1|AT5G05920.2 DHS (DHS) Encodes a deoxyhypusine synthase. Identical to Deoxyhypusine synthase (EC 2.5.1.46) (DHS) [Arabidopsis Thaliana] (GB:Q9FI94;GB:Q9ASU5;GB:Q9C5Y5); similar to Deoxyhypusine synthase (GB:Q6RJS2); similar to deoxyhypusine synthase [Crotalaria retusa] (GB:CAG28987.1); similar to deoxyhypusine synthase [Crotalaria scassellatii] (GB:CAI91280.1); contains InterPro domain Deoxyhypusine synthase; (InterPro:IPR002773)|Identical to Deoxyhypusine synthase (EC 2.5.1.46) (DHS) [Arabidopsis Thaliana] (GB:Q9FI94;GB:Q9ASU5;GB:Q9C5Y5); similar to Deoxyhypusine synthase (GB:Q6RJS2); contains InterPro domain Deoxyhypusine synthase; (InterPro:IPR002773) 1.0151318494632 8.21388818877173 6.52400781102273e-06 0.000193714694640703 12.3540403807641 8.43269424251925 1.0151318494632 0.154113169852224 AT5G07580_at 9.68651868065668 9.9131028535685 10.1375265934502 10.2776008187650 10.8314631254721 10.7557711885233 9.41591663409923 9.41314668619566 9.74440466056824 9.683264164851 10.8921462945375 10.4827162975738 10.0340287587429 10.5925672109807 9.73500533780943 10.3410966146098 9.1572956094586 10.1944525813262 9.6176555773998 0.124370576181698 0.123284337580440 0.126140527676146 0.124056158018818 0.126541122367772 0.129294363429373 0.125224989207878 0.130951990463561 0.135212967828071 0.135408556523380 0.118515544827656 0.122043149529646 0.120473908630183 0.132952290440377 0.121890074599023 0.118515544827656 0.138952178377677 0.134902012328944 0.136536306743906 5 5 + 2399757 2400322 2400037.273 2399505 2400602 + gene protein_coding_gene TRUE TRUE AT5G07580.1 DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G61590.1); similar to AP2 transcription factor [Capsella rubella] (GB:AAR15465.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.695154002556419 8.21340370512448 6.52757153415678e-06 0.000193714694640703 12.3535193758876 19.9841000171261 0.695154002556419 0.0479264941824615 AT5G11600_at 5.55528911470498 6.11783286470586 6.72323915688303 6.96854698288181 7.1447161562938 6.79164918048416 5.6383748207953 5.47204989244766 6.05546885501605 6.2591618290998 7.19531680487801 6.53014896478207 6.71423658332753 7.04820640727473 6.24615731292461 6.63812603510654 6.30362818906912 6.65094631385253 5.86629751349528 0.184989411360895 0.191498460853583 0.189771767784154 0.181679485410150 0.193787688802459 0.185949023973677 0.190922287689581 0.184815111742778 0.195152700516377 0.185503992322361 0.180993060793942 0.184293127106324 0.182627291539708 0.186751103839914 0.186616472249873 0.185780064493039 0.187929368117725 0.187420146099215 0.185958710393726 5 5|0 -|/ 3733830 3734851 3734285.778 3733655 3735100 - gene protein_coding_gene TRUE TRUE AT5G11600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19990.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV59389.1) 0.908343811585219 8.1957419613309 6.65893418843964e-06 0.000197271495359077 12.3345066841199 12.6645398839524 0.908343811585219 0.12586103676094 AT5G44400_at 6.54426612946395 7.06178456072236 5.93422264124469 6.14308742073065 4.73437522145968 4.85247526080041 4.72671665245275 5.19038803012083 4.41115131180800 5.67876650048468 7.89152779171891 9.52686850261757 7.48473233691594 7.82580936577908 9.44984235144852 6.90871088232001 5.28031848378911 7.97728089684452 6.41672257947036 0.258703967448884 0.250819968217305 0.248605722579078 0.250020450886125 0.261319111031263 0.264892653114048 0.257440278367635 0.255994247712794 0.263762975988582 0.250369588826435 0.256085687056079 0.261564582855486 0.248605722579078 0.256994111256694 0.253679421121775 0.248646371830437 0.255491588454725 0.254927624856332 0.253870393397689 5 5 - 17903593 17904147 17903915.364 17903421 17905707 - gene protein_coding_gene TRUE TRUE AT5G44400.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44390.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44380.1); similar to EDA28/MEE23 (embryo sac development arrest 28, maternal effect embryo arrest 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90048.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) 0.91308707768854 8.19545736456537 6.66107419285699e-06 0.000197271495359077 12.3342000063399 12.2960893847995 0.91308707768854 0.127214434785899 AT5G05670_at 5.74345612815689 5.28648221010057 5.77085265361100 5.82559691254331 6.18627601883779 6.36627213383034 5.19743047797199 5.32335445210904 5.24441932387778 5.25274973173975 6.0229506828023 6.35796236020665 5.89982182809216 5.9199867668235 6.27136835235977 5.88414529821214 5.56251402140801 5.92911144505857 4.66922399481165 0.185422574392855 0.176061837340474 0.181843720405989 0.175980526293235 0.180912052216043 0.187826790821803 0.191894932904136 0.181603625516482 0.179931070133608 0.191081735527355 0.179168612652135 0.181694400494227 0.179348802096628 0.187757337955136 0.175096062187614 0.175096062187614 0.187717737801275 0.186288502306648 0.188736634869281 5 0|5 /|- 1695973 1696765 1696366.3 1695731 1698154 - gene protein_coding_gene TRUE TRUE AT5G05670.1|AT5G05670.2 signal recognition particle binding| similar to signal recognition particle binding [Arabidopsis thaliana] (TAIR:AT2G18770.1); similar to AAA ATPase; Small GTP-binding protein domain [Medicago truncatula] (GB:ABE88783.1); contains domain SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT RELATED (PTHR19326:SF4); contains domain FAMILY NOT NAMED (PTHR19326); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 0.78754342842416 8.19314648571488 6.67847823383113e-06 0.000197651917776543 12.3317094663662 11.2306885956518 0.78754342842416 0.0882540686025617 AT5G59610_at 6.86424384514601 6.96297371871834 7.98487545401726 7.826394813345 8.37529803354131 7.67286153148884 7.77987868145842 7.51985929231466 6.34955487764271 6.52249079421533 7.75079418522739 7.6853394891821 7.58455301622621 7.6559835860534 7.76439761196468 7.7812031454336 7.43844762078147 7.25547309427663 6.40773840884144 0.205759019288198 0.198776114522541 0.205855737580749 0.200610567290678 0.194825454615298 0.216472807440698 0.194825454615298 0.205589410346822 0.212385943195321 0.197823261766951 0.194825454615298 0.204363324748013 0.200953942703720 0.205577462681894 0.200637687311884 0.194825454615298 0.213256306005626 0.215773962558737 0.207299260830580 5 5|0 +|/ 24030598 24032130 24031106.7 24030391 24032180 + gene protein_coding_gene TRUE TRUE AT5G59610.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT4G39960.1); similar to Heat shock protein DnaJ, N-terminal [Medicago truncatula] (GB:ABD33136.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.935523924382715 8.19205157322736 6.68674156578373e-06 0.000197761483225322 12.3305292008689 14.6438575023586 0.935523924382715 0.133587756647471 AT5G56600_at 9.42405165767543 9.59068709857727 10.3305017227754 10.5020805039943 10.2816873474007 10.2349406510347 10.2998845312006 10.442476337984 9.45549233112838 10.0413353267643 10.6181381869245 10.4539298048539 10.5674083657252 10.6749604342674 10.6397689498431 10.7625877622534 10.8932850084993 10.9563441547427 9.62083560527418 0.0838347504100322 0.0833626345250407 0.0842479065395146 0.0802188103537143 0.0808759027520576 0.0817652679695064 0.0803144833165063 0.078986422013911 0.0904656636026336 0.0809010291483304 0.0786029773537998 0.0786029773537998 0.0786029773537998 0.0808382077984522 0.0790445293267917 0.0797087006016586 0.081284656500582 0.0810292550636785 0.0864152845576307 5 5 - 22927108 22927907 22927471.091 22926911 22928047 - gene protein_coding_gene TRUE TRUE AT5G56600.1 PFN3/PRF3 (PROFILIN 3); actin binding Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs. Identical to Profilin-5 (PRO5) [Arabidopsis Thaliana] (GB:Q9FE63); similar to PFN1/PRF1 (PROFILIN 1), actin binding [Arabidopsis thaliana] (TAIR:AT2G19760.1); similar to profilin [Citrullus lanatus] (GB:AAU43733.1); contains InterPro domain Plant profilin; (InterPro:IPR005455); contains InterPro domain Profilin/allergen; (InterPro:IPR002097) 0.693971364470854 8.1798922129626 6.77925530301727e-06 0.000200360920400532 12.3174121002722 20.3391340252191 0.693971364470854 0.0488628432528271 AT5G24740_at 5.68692282458885 5.4868231100719 6.83218987749572 6.37119644389314 6.76804367236641 6.43508762122711 5.80696725421334 5.43924563881589 5.14194577060305 5.44052328661516 6.20001352712636 5.96807677323945 5.85329520540995 6.16476027381964 6.09024982692077 6.76835256025224 5.68851750524632 5.79846591461502 5.24505741290879 0.187306338515552 0.178179656599383 0.180632177251666 0.178320764076608 0.178605298976352 0.190701786652068 0.191904076051947 0.184563405895039 0.190538944256248 0.192797287844398 0.185464769724456 0.180020975475803 0.181350674707486 0.188102927531402 0.184183829667418 0.181033264603119 0.194420548901409 0.196480427619527 0.187088367028165 5 5 - 8470097 8470632 8470429 8469954 8489706 - gene protein_coding_gene TRUE TRUE AT5G24740.1 similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48090.2); similar to hypothetical protein MtrDRAFT_AC135799g29v1 [Medicago truncatula] (GB:ABE82166.1); contains InterPro domain Vacuolar protein sorting-associated protein; (InterPro:IPR009543) 0.89363199422141 8.17807281746222 6.79321668101734e-06 0.000200636782266197 12.3154478407118 11.7744638578529 0.89363199422141 0.122200827703925 AT5G61990_at 3.37156944504226 3.68826951528415 4.0984858833421 4.48155643443657 4.71723428019677 4.58302838871251 3.52743951125337 3.89099629792395 3.61733778126581 3.38968648799479 3.94213074515952 4.46401614452866 4.29769427774051 4.45019592566286 4.39353905371895 4.69714646365716 4.25556055996567 4.50256816128879 3.57715205884306 0.230234708520629 0.230234708520629 0.236716644826021 0.235231238306144 0.231444680461178 0.244340958393427 0.230234708520629 0.233398637765912 0.248682696674887 0.248636734846397 0.230234708520629 0.230477540624706 0.232405468861745 0.245758252284087 0.233295123937923 0.230234708520629 0.242591292432175 0.231674838376708 0.233141591949909 5 5 - 24917475 24917934 24917706.364 24916832 24920343 - gene protein_coding_gene TRUE TRUE AT5G61990.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Os07g0300200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059422.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.848902597363382 8.17151202927792 6.84382052214779e-06 0.000201993762284559 12.3083612976494 7.99653006577387 0.848902597363382 0.109069305071591 AT5G42990_at 7.57440972201739 7.8150517456236 8.19099678043075 8.23981455985196 8.26899344103281 8.01018835518362 7.85827825608549 8.0295823037854 6.86239648461023 7.23600505973698 8.26889684618578 8.4589319579169 8.22955325619929 8.14768747616236 7.49317144518306 8.5575465525309 7.9342303419364 7.79092149500426 6.90346495979418 0.17522926643602 0.167351976768085 0.168674464516872 0.167374523110964 0.169794815593989 0.171349331616559 0.168375560169910 0.163860801190949 0.198357287474369 0.173992833757789 0.162991522466781 0.162991522466781 0.166589113786252 0.172598339008543 0.169423574146815 0.168793151502747 0.184895918576851 0.178873865920153 0.173446716790443 5 5|0 -|/ 17261473 17262937 17262311.875 17261215 17263204 - gene protein_coding_gene TRUE TRUE AT5G42990.1 UBC18 (ubiquitin-conjugating enzyme 16); ubiquitin-protein ligase similar to ATUBC2-1 (Arabidopsis thaliana ubiquitin-conjugating enzyme), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G45050.1); similar to Ubiquitin-conjugating enzyme, E2 [Medicago truncatula] (GB:ABE89644.1); similar to Os12g0636800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067367.1); similar to Os03g0681400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050906.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.733831515294777 8.16976310971832 6.85737876442018e-06 0.000202256247688625 12.3064713352883 15.5537841902199 0.733831515294777 0.0684861308539067 AT5G42790_at 10.1831959487891 10.0078848340731 10.9160270622581 10.8861006998895 10.7338811552972 10.4712066813552 10.0004234020177 9.73388581426982 9.6315212696705 9.38985970304786 10.4171322749656 10.2889428017388 10.0131163101208 10.3872493743503 10.1407714005301 10.2122214287131 10.0648550505996 10.0612745976818 9.44013537596694 0.0943258085351113 0.0936886063649808 0.0952422773946174 0.0988622508327578 0.0951468941408687 0.0972324368619862 0.0988156913307625 0.0975254398051212 0.117211379263133 0.105423962231699 0.0973718376172265 0.0936886063649808 0.0974361350884614 0.0982114585522002 0.100719327410217 0.0936886063649808 0.0999111524215376 0.102135403521043 0.104716760981738 5 5 - 17176510 17177942 17176873.364 17176272 17178298 - gene protein_coding_gene TRUE TRUE AT5G42790.1 PAF1 (proteasome alpha subunit F1); peptidase encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome) Identical to Proteasome subunit alpha type 1-A (EC 3.4.25.1) (Proteasome subunit alpha type 6) (20S proteasome alpha subunit F-1) (Proteasome 30 kDa subunit) (Proteasome component 2A) (AtPSM30) (PAF1) [Arabidopsis Thaliana] (GB:P34066;GB:O81150;GB:Q8LF69); similar to PAF2 (20S proteasome alpha subunit F2), peptidase [Arabidopsis thaliana] (TAIR:AT1G47250.1); similar to 20S proteasome alpha 6 subunit [Nicotiana benthamiana] (GB:AAN07899.1); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353); contains InterPro domain Proteasome alpha-subunit; (InterPro:IPR000426) 0.740739844260832 8.1609334808614 6.92627401241757e-06 0.000204149414385714 12.2969239011722 20.2092594602767 0.740739844260832 0.0717018203344895 AT5G13020_at 8.11355462065004 8.06483511767412 8.73360542729497 8.63072241592376 9.2353571883579 8.79730875918424 7.78930118968913 8.00717972103319 7.84753506049508 7.43078275976436 8.44308296957206 8.47969344213344 8.36542487557387 8.57003393638172 8.17080457677175 8.56531367595419 8.08230404727498 8.27295956247246 7.71428983106327 0.154411283492848 0.150353536530298 0.153775151136866 0.158259802760094 0.154756269457069 0.154227027435054 0.15722033376495 0.148988003548515 0.166821638710704 0.148216578862062 0.162293779677318 0.151376283975872 0.147944113084573 0.153840543161824 0.159236537541881 0.148565711036318 0.167224095676906 0.154739837905439 0.147820895565275 5 5|0 -|/ 4129887 4131003 4130368.667 4129362 4132092 - gene protein_coding_gene TRUE TRUE AT5G13020.1 emsy N terminus domain-containing protein / ENT domain-containing protein similar to emsy N terminus domain-containing protein / ENT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G44440.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87186.1); similar to Os08g0328300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061559.1); similar to Os09g0279000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062755.1); contains InterPro domain ENT; (InterPro:IPR005491) 0.780015185377252 8.15369281582684 6.98332951002454e-06 0.00020569127357052 12.2890874574496 16.4379353980798 0.780015185377252 0.0869271999094522 AT5G11350_at 6.18053733943574 5.94714730007056 6.74964557739328 6.54535513256578 7.05160238240772 6.59870219620603 5.63678178070368 5.42858183424916 5.47255476653882 5.70419315662803 6.61240338918094 6.55173869195723 6.19879511350852 6.2011145586546 6.44735880654448 6.32207259267192 6.280966640339 6.30952649425551 5.79413404536745 0.178001879611073 0.16847447617943 0.169378521335821 0.169492243005317 0.175261899239662 0.168171302512768 0.173203669027667 0.177500963049356 0.188073750788708 0.170071617919473 0.167161347749868 0.172081699494473 0.171786290567021 0.183777364401015 0.167161347749868 0.172727537682835 0.172772293999236 0.176935839017154 0.180017312412754 5 5|0 +|/ 3624530 3625382 3625014.2 3621569 3625646 + gene protein_coding_gene TRUE TRUE AT5G11350.1 endonuclease/exonuclease/phosphatase family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18500.2); similar to putative protein-related [Medicago truncatula] (GB:ABE92649.1); similar to Os01g0610600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043546.1); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) 0.823300319119671 8.15300171812722 6.98880177468114e-06 0.000205712706532465 12.2883391576403 12.2785230389126 0.823300319119671 0.101598165095682 AT5G09860_at 7.59506366713058 7.42918277628656 8.28891479628094 8.19889838465595 8.76201768756528 8.42945956798006 8.18833189553414 8.05891557190747 7.70279438507914 7.37915126966911 8.48501412524064 8.64441248412614 8.296386857825 8.65955371902962 8.3691473266354 8.41942238188418 8.24155409020623 8.2751082144976 7.58440011985488 0.119362052158909 0.122814200543264 0.124533159555461 0.123244586932488 0.123099921334795 0.119362052158909 0.120221845666701 0.122515678357818 0.124965018349772 0.133914665506036 0.121295943865570 0.122665920892891 0.123592604709502 0.119970267126080 0.124229313370961 0.121134540526543 0.123697082816864 0.128969185365421 0.127878557825876 5 5|0 +|/ 3069921 3070696 3070367.4 3066633 3070934 + gene protein_coding_gene TRUE TRUE AT5G09860.1 nuclear matrix protein-related similar to Os03g0110400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048715.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN61477.1); contains domain NUCLEAR MATRIX PROTEIN (PTHR13265) 0.735162719901048 8.14838331343114 7.02549054564836e-06 0.000206652332964797 12.2833369796189 16.1084847891501 0.735162719901048 0.069859857638676 AT5G48540_at 8.74406593475681 9.45091804918368 10.1056676714544 10.4272340023999 9.20778234528303 8.66737319523387 7.42410326840928 7.75937699662965 7.99519787218766 7.43931140848338 8.39821778978424 9.25355585055016 7.90079205125628 8.87427184696822 8.0817646316211 8.97419208128723 7.48616646755981 8.13368120832476 6.99758820413118 0.192742587987834 0.179257688764833 0.187765038001948 0.186679630059337 0.179535079383900 0.214762029471366 0.187551576875768 0.183796980796051 0.197136896504088 0.192773731531926 0.182075693979244 0.179257688764833 0.187863548003957 0.182113206395145 0.180581826477292 0.179257688764833 0.195898113354884 0.191960810175201 0.190194501231503 5 5 - 19686331 19686835 19686625.727 19686190 19687146 - gene protein_coding_gene TRUE TRUE AT5G48540.1 33 kDa secretory protein-related similar to receptor protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G22060.1); similar to 33 kDa secretory protein-like protein [Brassica rapa subsp. pekinensis] (GB:AAN23095.1); similar to Os03g0277600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049721.1); similar to Os03g0277700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049722.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 1.08393132699976 8.14700310721668 7.03649532388739e-06 0.000206835711910072 12.2818415736879 16.905913217512 1.08393132699976 0.173702004764462 AT5G54870_at 8.72043998027516 8.96596882233188 9.8429964428982 9.88096381286782 9.69654429375072 9.56292072685295 8.84763228013142 9.03920859269359 8.46833442944563 8.70760226046988 9.34044212040212 8.82003689488544 9.47634223255431 9.12503264578944 8.74425809975563 9.35639707242902 9.24530800616787 9.19143538319173 8.60586988678596 0.130130689197862 0.131377677214875 0.131676341053839 0.131505130229610 0.137888193895448 0.135150543180705 0.133064518808755 0.144425946015673 0.143997009880185 0.129469310553050 0.129989351646492 0.132124042774818 0.130522681819504 0.134476357700003 0.136906438270879 0.136412830188894 0.151938359652972 0.145333218830212 0.137235550868686 5 0|5 /|+ 22308363 22308776 22308592.556 22306361 22309025 + gene protein_coding_gene TRUE TRUE AT5G54870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70160.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27020.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53001.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89049.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE93629.1) 0.7105074657821 8.14391992297078 7.06114580246362e-06 0.000207419681969461 12.2785002026624 18.1977554102073 0.7105074657821 0.0590120652882279 AT5G06300_at 3.42542140477977 3.63304247461876 4.26898646830112 4.54052461968959 6.80817176869497 6.02443223871075 4.52039460157644 3.8596375844722 2.43971485814133 2.96831747550416 3.19689048297871 3.27449633009045 5.33945202928201 3.76682394749508 2.96150364748041 2.73849463489309 4.56856669623383 2.97312827340031 3.23068032338993 0.253565265991486 0.255544425534852 0.246060753262341 0.248295521037995 0.252745211862362 0.255025593109952 0.251710835368471 0.260963608044829 0.251476792998511 0.249190886571315 0.246060753262341 0.246060753262341 0.260404004545878 0.258229022216848 0.255118627182051 0.248842665842652 0.262746165552436 0.246060753262341 0.249458839530422 5 5|0 -|/ 1922255 1924008 1922791 1921745 1925371 - gene protein_coding_gene TRUE TRUE AT5G06300.1 carboxy-lyase similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABD32794.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) 1.13687668852029 8.13820873405817 7.10705452342722e-06 0.000208626894916786 12.2723076643513 7.87607159056055 1.13687668852029 0.187002117247573 AT5G56220_at 1.80433876407431 1.51849570079853 1.93829229952456 1.99431365892715 2.14667116720763 2.47942794604368 1.34341584937468 1.32815896887667 2.05796801531526 1.57078070768056 3.05279644229088 2.94277033536624 2.59026279001275 2.52497174787795 3.15084303161658 2.79921448340985 2.36991193224377 2.81053536232097 2.13187327269038 0.187441403032402 0.187686395954945 0.198977175962576 0.194699924391455 0.188849064678189 0.189508363159248 0.199417820626023 0.184126574944326 0.198651443985879 0.184027522748620 0.188709934480899 0.189476167504817 0.194827717792422 0.186950826965627 0.190690076796953 0.187191020597154 0.186115372435159 0.194030537460953 0.194759249456999 5 5 + 22774421 22774950 22774672.182 22772044 22775146 + gene protein_coding_gene TRUE TRUE AT5G56220.1 nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT4G23440.1); similar to putative ATPase [Triticum aestivum] (GB:CAJ19360.1); similar to Os08g0499100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062146.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.750514940445842 8.13482771642943 7.13438441333751e-06 0.000209287463506029 12.2686397945484 4.16932459312229 0.750514940445842 0.0765763457149764 AT5G42950_at 7.62371216454457 7.64487369291537 8.38307603672366 8.52246930253852 8.89462928337455 8.32443208213122 7.3832359088309 7.3342703372515 7.86283534217518 7.19489178764364 8.15287949273199 8.38486749283467 7.91111760554625 8.35462783566254 7.821724490353 8.24871297719484 7.86350302949774 7.8898582891951 7.34788329377131 0.157689330144851 0.160724738928027 0.165261918240127 0.157518100231066 0.161712230522158 0.161437107757480 0.159387325937677 0.167239304858815 0.156996562531027 0.161902589321373 0.158085965118454 0.163204036937191 0.166493322844183 0.159609449186115 0.160727239457257 0.156608821823101 0.152330631886869 0.163740714475515 0.15908072697872 5 5|0 +|/ 17247472 17248195 17247898.1 17241664 17248583 + gene protein_coding_gene TRUE TRUE AT5G42950.1 GYF domain-containing protein similar to GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G27430.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83483.1); contains InterPro domain GYF; (InterPro:IPR003169) 0.822251622035022 8.13030682920596 7.17110591661256e-06 0.000210084734307180 12.2637331442997 15.7873114557840 0.822251622035022 0.101999653236088 AT5G60690_at 5.95047194208518 5.38739172834858 6.71087754877041 6.49846641557488 6.27024123679344 6.24659493411471 5.55907565513226 5.81099966545478 4.84280654363985 5.67583844582508 6.57232031916458 6.88443364799475 6.0538237718951 6.51956063690804 6.37506531858285 6.59864887064049 6.30376547138134 6.57776880778331 6.05788995969281 0.210429367249536 0.192244152501018 0.20452993016183 0.202972706082122 0.194282759514586 0.197307045354932 0.195844269478102 0.192592540101165 0.205730096581641 0.192030891787629 0.201593683730091 0.199613369493308 0.194187649307723 0.191508566715180 0.19836643938293 0.195569760984541 0.19437283876167 0.193006760826543 0.194513022619640 5 5|0 +|/ 24418387 24418884 24418568 24414249 24419421 + gene protein_coding_gene TRUE TRUE AT5G60690.1 REV (REVOLUTA); DNA binding / lipid binding / transcription factor REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA. similar to PHV (PHAVOLUTA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G30490.1); similar to PHB (PHABULOSA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G34710.1); similar to ATHB-15 (INCURVATA 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G52150.2); similar to class III HD-Zip protein 1 [Populus trichocarpa] (GB:AAX19050.1); similar to TPA: TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus] (GB:DAA05766.1); similar to HD-Zip protein [Zinnia elegans] (GB:CAC84906.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) 0.857360995941362 8.13028872261355 7.17125339996584e-06 0.000210084734307180 12.2637134876212 12.0598573934158 0.857360995941362 0.112977352069520 AT5G05200_at 11.2281905003209 11.0755281982459 12.0925264956477 11.8894562879768 12.1297381983413 11.8282785364524 11.5170526560560 11.3101712546802 11.0022867704628 11.3098275296641 11.8796998677053 11.6648513440286 12.0520647950011 11.9568152207742 11.6188352497518 12.1493946204039 12.2567890113206 12.1644988841808 11.1911762239770 0.0624277252473839 0.0605296958043833 0.0614013727112329 0.063792433309885 0.0609042162532925 0.06250917820979 0.0599677178351377 0.0597036969125282 0.0680146922393393 0.0657133465794737 0.0626602666750962 0.0605180463205761 0.0598999009633918 0.0603710954840624 0.0637034439406448 0.0593877701053372 0.0611703717490473 0.065016647585978 0.0631127702564047 5 5|0 -|/ 1544249 1545145 1544590.667 1544008 1547142 - gene protein_coding_gene TRUE TRUE AT5G05200.1 ABC1 family protein similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT4G31390.1); similar to Os07g0227800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059219.1); similar to ABC1 family protein kinase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20904.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.751184671694989 8.12903258943923 7.18149297107549e-06 0.000210164082054826 12.2623497194976 23.2016838320553 0.751184671694989 0.0770474520916811 AT5G40870_at 6.65517172416199 7.01151275181376 7.66215795088849 7.48924952873328 8.25636474224487 7.60468655895136 7.10957951015485 6.88819478781743 6.32646433818039 6.4881495270026 7.53524830056303 7.55530801389061 7.53349189684273 7.70986904800941 7.2799409172817 7.58597487065518 7.26747299079597 7.67699103793982 6.59749173291052 0.196989202854195 0.180091131827742 0.183023875010008 0.179096180556449 0.194625638051513 0.194058978873242 0.186312934274158 0.182305264226048 0.192183885566177 0.192104255696150 0.185060628024016 0.180606024266648 0.180449508701231 0.189646884340196 0.188426257472993 0.183215060558928 0.193386288428912 0.189807248231188 0.183238130175161 5 0|5 /|+ 16394480 16395569 16395153.667 16392136 16395880 + gene protein_coding_gene TRUE TRUE AT5G40870.1 ATUK/UPRT1; ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT3G27190.1); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.3); similar to uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) [Arabidopsis thaliana] (TAIR:AT4G26510.2); similar to Os09g0505800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063605.1); similar to Phosphoribosyltransferase; AAA ATPase; Phosphoribulokinase/uridine kinase [Medicago truncatula] (GB:ABE83101.1); similar to Os08g0530000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062322.1); contains InterPro domain Phosphoribulokinase/uridine kinase; (InterPro:IPR006083); contains InterPro domain Uridine kinase; (InterPro:IPR000764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836) 0.942167635091814 8.12876742973233 7.1836564826457e-06 0.000210164082054826 12.2620618140290 14.32898419461 0.942167635091814 0.13742021220579 AT5G54780_at 3.44778332382597 4.11006294855847 5.2955798174405 4.96540516043536 4.83718666831513 4.26491008292778 3.19684152646627 3.40618738739468 3.13610712619947 3.49481879657599 4.09294087121956 4.34381634017868 4.35931849619167 4.26634465587186 3.86272261659009 4.14884210873648 3.68053241611967 3.91885025359816 3.22152254252473 0.238963954316158 0.230421106555253 0.237658261679777 0.234222082987671 0.238952431891312 0.25335046327321 0.230421106555253 0.230421106555253 0.235294787161887 0.235222924391641 0.230421106555253 0.237358940335520 0.230421106555253 0.230421106555253 0.230421106555253 0.230421106555253 0.237916367015943 0.231389258510802 0.236591167226817 5 5|0 -|/ 22266264 22266807 22266573.4 22265673 22269089 - gene protein_coding_gene TRUE TRUE AT5G54780.1 RAB GTPase activator similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT4G27100.2); similar to TBC domain, putative [Medicago truncatula] (GB:ABE91156.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 1.05028655854911 8.12760432735578 7.19315488463345e-06 0.000210300063141562 12.2607988366648 7.87465484354385 1.05028655854911 0.165893976001440 AT5G63110_at 7.77271044525427 7.44038842280334 8.20749142014962 8.5512549832134 8.35818611695524 8.07040831477784 7.37173696615944 7.53133637605941 7.12891870452813 7.15132424660228 7.49233825941083 8.15231926757528 8.12209295163352 8.11421063300219 7.6886764318688 8.18272276080534 7.93286825838736 7.97308744864767 7.00074265755588 0.185127882764451 0.180547069819463 0.199290934597481 0.176151479684584 0.182186932499797 0.192508784266071 0.180104042059428 0.172718604797648 0.190047777626909 0.191960122936864 0.177971461289200 0.177329432603307 0.176820484264669 0.176606607800327 0.173295680013982 0.177299326440336 0.177905261342831 0.184890307672506 0.187144421583576 5 5|0 -|/ 25333072 25334193 25333829.6 25332850 25335573 - gene protein_coding_gene TRUE TRUE AT5G63110.1 HDA6 (HISTONE DEACETYLASE 6); histone deacetylase RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing. similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to histone deacetylase [Triticum aestivum] (GB:AAU82113.1); similar to Histone deacetylase superfamily [Medicago truncatula] (GB:ABE82485.1); similar to histone deacetylase [Zea mays] (GB:AAD10139.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286); contains InterPro domain Histone deacetylase; (InterPro:IPR003084) 0.815709894029595 8.1129135130344 7.31430229473068e-06 0.000213697847099167 12.2448321525602 15.4384148161608 0.815709894029595 0.100446172788156 AT5G01310_at 2.60878003701257 2.74184594394337 3.33130155829100 3.62055217715298 3.05253240850341 3.58647831844479 2.31929248061498 2.76506270591885 2.71770517234022 2.27492615904082 3.75620801241661 3.38361106842196 3.56649996449416 3.86183891219842 3.30067972624571 3.73854291136210 3.55589644434923 3.31231457664557 2.52299960836980 0.203699372070830 0.196260835532317 0.203198571532574 0.195514717379481 0.195580515126828 0.199533520616881 0.201436980966503 0.200369377057527 0.195654530196064 0.205134075422908 0.19277120844311 0.194150928343250 0.195274470955592 0.191623021950151 0.191923894179918 0.194022506434107 0.191055599709987 0.203690227659195 0.197645115001132 5 5|0 +|/ 128131 128927 128623.889 125303 128959 + gene protein_coding_gene TRUE TRUE AT5G01310.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G09750.1); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G21330.1); similar to basic helix-loop-helix, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95410.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Histidine triad (HIT) protein; (InterPro:IPR001310); contains InterPro domain Appr-1-p processing; (InterPro:IPR002589); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.921604731246024 8.10794295172515 7.35578980253731e-06 0.000214765243713763 12.2394238693002 6.03556033636874 0.921604731246024 0.132381929734953 AT5G61820_at 9.87955089599653 10.0970422817228 11.0342846866028 11.3967028804895 10.9051636813362 10.7652092323757 10.7453805708658 10.9405484988158 8.41391830250822 9.6682800730496 9.51192564104377 9.28634524131816 10.3932590063386 10.2457217782981 8.92924669290336 10.4433967557625 10.7427965259775 10.1540099032101 9.03054651292679 0.116586943633380 0.111161762861204 0.111071680419813 0.112178654900650 0.111723888475740 0.117671306843729 0.112746354871732 0.110747588161177 0.125923660144300 0.107435303312699 0.107435303312699 0.115187225516456 0.111419370344931 0.116501413270278 0.122233766611757 0.113972960374631 0.115652760493436 0.116275309868325 0.118778004558439 5 5|0 -|/ 24851781 24852363 24852049.4 24851544 24853920 - gene protein_coding_gene TRUE TRUE AT5G61820.1 similar to hypothetical protein [Trifolium pratense] (GB:BAE71234.1); contains InterPro domain Stress up-regulated Nod 19; (InterPro:IPR011692) 0.767732810981236 8.10586898161281 7.37317564317458e-06 0.000215127986632835 12.2371663559184 20.2209450023263 0.767732810981236 0.084127925393479 AT5G05320_at 5.22858655921556 5.84144896679308 5.47781376128944 5.28786152675404 6.18842135918433 6.1821303072695 2.56844682096629 2.81294367626333 3.66629602769676 2.91489068151411 3.40743675788321 3.43012910356669 2.7921861039912 3.70344496845165 2.85759598354425 2.60585509243692 3.55885284698853 3.36741546429395 2.83573128484541 0.261128692069945 0.264831782755534 0.268762461268395 0.257377206273342 0.273069111392771 0.265005730200971 0.251964781685843 0.254608065757661 0.256927267459672 0.251017672735588 0.251964951873062 0.255146218692304 0.25546506132786 0.252066364729842 0.263062128048074 0.255452464341605 0.258769480461635 0.259928910401104 0.252855506161140 5 5 - 1575135 1575700 1575384.727 1575007 1576732 - gene protein_coding_gene TRUE TRUE AT5G05320.1 monooxygenase, putative (MO3) similar to monooxygenase, putative (MO2) [Arabidopsis thaliana] (TAIR:AT4G38540.1); similar to monooxygenase [Solanum tuberosum] (GB:BAC23045.1); similar to Os03g0154100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049002.1); similar to Os03g0153900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049000.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.873796054136942 8.10143695429664 7.41047785880767e-06 0.000216070953222610 12.2323403167948 8.12562522463193 0.873796054136942 0.118829528451902 AT5G02560_at 7.4853042235185 7.78472096451326 8.55182819952234 8.3629817633131 8.93488847294442 8.47534015177554 7.873132467936 8.3366006759058 7.41679111135797 7.68182512260812 8.66375398214231 8.69281839686981 8.79118664011014 8.97191228999165 8.64415062240143 8.99232184149984 8.82121675173163 8.6153267473354 7.91552310402417 0.142926907057327 0.151588057400600 0.14867580195303 0.143023946899471 0.146217318848141 0.159769908940444 0.148735134783277 0.145441864593989 0.163671569534221 0.150724930984915 0.142467384719438 0.148816458803840 0.140580130987576 0.141566321919101 0.144494617961178 0.142577453079368 0.151198806870071 0.146435146022849 0.143993386582606 5 5|0 +|/ 575528 576428 576071.222 575380 576604 + gene protein_coding_gene TRUE TRUE AT5G02560.1 histone H2A, putative Identical to Probable histone H2A.4 (HTA12) [Arabidopsis Thaliana] (GB:Q9LZ46); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT5G59870.1); similar to Histone H2A (GB:Q9M531); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.90701309680032 8.1007278392734 7.41646504147212e-06 0.000216100198163438 12.2315679350913 16.4483324590988 0.90701309680032 0.128492452824982 AT5G01980_at 7.65358712109496 7.72423683924622 8.2543758797459 8.33993010897037 8.01958752367122 8.23728369241621 6.80668133249132 6.91318824606057 7.51220111841761 7.03885386472614 7.50937423850472 7.75953905031344 7.60799406292607 7.62231564325442 7.43473044213196 7.88956504835208 7.95256621855157 7.84752560694119 7.28178143504429 0.133450430968594 0.128811971512881 0.13550446678712 0.135889622810991 0.130116135802949 0.136780975796446 0.131699537960216 0.137479328130435 0.153254969582601 0.144996474017516 0.132081060118011 0.131378332822275 0.130277605899431 0.136032996981543 0.137988554284105 0.128811971512881 0.131627263843987 0.130153774457626 0.137684425294447 5 5 + 376496 376956 376692.909 375212 377205 + gene protein_coding_gene TRUE TRUE AT5G01980.1 zinc finger (C3HC4-type RING finger) family protein similar to CIP8 (COP1-INTERACTING PROTEIN 8), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G64920.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91189.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.681855032976789 8.09249826166542 7.48633256249197e-06 0.000217910705976863 12.2225995659846 15.2338905570961 0.681855032976789 0.0461268606608509 AT5G63320_at 7.1507394572969 7.06090547275615 7.54175888525509 7.52175318203888 7.94274281315332 7.69078192056512 6.77268277369692 6.9079060721981 7.26059729198095 7.44388347211449 8.46261580120294 8.7557248556413 7.9728461741739 7.91142078034751 7.96573655055272 8.3542338562692 7.44746492802048 7.67912977248006 7.45193017611814 0.203577968547824 0.199572114231653 0.204238044037763 0.209195517797518 0.202516194540487 0.212224292653357 0.204460319892580 0.201054234699687 0.21544407719772 0.201588797308643 0.199464671363350 0.195399567563305 0.20283226906227 0.203726972041578 0.195399567563305 0.19679210268284 0.215326373178173 0.206353912639107 0.201131273068894 5 5 - 25391666 25392070 25391847.545 25391639 25393813 - gene protein_coding_gene TRUE TRUE AT5G63320.1 similar to GTE8 (GLOBAL TRANSCRIPTION FACTOR GROUP E8), DNA binding [Arabidopsis thaliana] (TAIR:AT3G27260.1); similar to putative bromodomain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08859.1); contains domain FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS (PTHR22880); contains domain GCN5 GENERAL CONTROL OF AMINO-ACID SYNTHESIS 5-LIKE 2, GCNL2 (PTHR22880:SF2) 0.692188516348787 8.0922263946575 7.48865276701171e-06 0.000217910705976863 12.2223031495645 15.0507172737403 0.692188516348787 0.0519855763022911 AT5G55610_at 8.26975702438866 8.39697385574492 8.84158967966967 8.9805104504665 9.14619648438576 8.52750304860147 8.70433720846545 8.49959411323823 7.18685853993907 7.36750868863876 8.39857784135143 8.61171726491411 8.46302355023235 8.68100364651168 8.76850524746754 8.690179643305 8.47873961773832 8.51977909261763 7.18662654226333 0.153922155401605 0.146849697123209 0.150134374821854 0.152896821141782 0.149912565187393 0.161520554560647 0.148448653795702 0.144814535997984 0.169943526923413 0.173621489167829 0.154787196558327 0.15113817089242 0.149047065190824 0.150863458419555 0.145443385307983 0.146892087542132 0.152277511511769 0.148677352830365 0.162489160335531 5 5|0 +|/ 22544095 22545048 22544530.5 22543033 22545336 + gene protein_coding_gene TRUE TRUE AT5G55610.1|AT5G55610.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92111.1) 0.867863589862535 8.09111086483783 7.49818121486829e-06 0.000218041635575922 12.2210867922237 16.5825270639356 0.867863589862535 0.117394907130476 AT5G58450_at 6.76574943196036 7.07378988049426 7.59656364769884 7.87857438521444 7.85171314844667 7.48276412198022 6.68526327506516 6.57026333763243 5.93147899858889 6.13017456751417 6.41766007036967 7.25571322505921 6.72875269025568 6.79655501048759 7.13912741241837 6.91847450769808 6.61863430586869 6.60580300351068 6.31020854849592 0.232920862773511 0.235048417627929 0.232920862773511 0.238086167074368 0.239165313751625 0.237101843800313 0.242163491629715 0.239731616331629 0.239316666658564 0.237787777701508 0.232920862773511 0.233031505863733 0.232920862773511 0.232920862773511 0.240609998459701 0.232920862773511 0.251809529797642 0.233539561978354 0.235204364343051 5 5 + 23648698 23649266 23648983.091 23644052 23649449 + gene protein_coding_gene TRUE TRUE AT5G58450.1 binding similar to Unknown (protein for IMAGE:3404939) [Xenopus laevis] (GB:AAI08817.1); similar to Os05g0345400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055256.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.80738666727791 8.08984038923987 7.50904911699743e-06 0.000218183315616978 12.2197012964036 13.7051071867656 0.80738666727791 0.0984690683916893 AT5G64330_at 7.2855231104664 7.38321957128518 6.65156281398068 6.97949675812948 8.77689749478601 8.5361474619258 7.46527526094142 7.4464459414153 7.54043586172998 7.7074739683388 9.26738156242344 9.35687343060398 9.34636210432154 9.25383223649085 9.10923132184596 9.0885978417213 8.26668262773357 8.97586474646552 8.60765104233355 0.184248994246276 0.182535085461728 0.191602083766056 0.195903746575719 0.171110092742630 0.186038994769924 0.178264757865982 0.183350877583457 0.189366334070572 0.179838192740660 0.179824214054775 0.176155793729983 0.180698054727463 0.182345843785760 0.171835277462520 0.171110092742630 0.183014362565105 0.176384654407900 0.175394667435960 5 0|5 /|+ 25746870 25747389 25747110.8 25744563 25747584 + gene protein_coding_gene TRUE TRUE AT5G64330.1 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); signal transducer Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. Identical to Root phototropism protein 3 (Non-phototropic hypocotyl protein 3) (RPT3) [Arabidopsis Thaliana] (GB:Q9FMF5;GB:Q9SPB4); similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G30440.1); similar to BTB/POZ; NPH3 [Medicago truncatula] (GB:ABE93078.1); similar to putative non-phototropic hypocotyl 3 (NPH3) [Oryza sativa (japonica cultivar-group)] (GB:BAD17765.1); similar to Os02g0568200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047181.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.736079885497536 8.08888525924083 7.51723070116575e-06 0.000218183315616978 12.2186595636617 16.0830494806587 0.736079885497536 0.0724767294809429 AT5G65250_at 6.44553211729368 6.72326979146195 7.28550556113091 7.39869807972438 7.4736534398349 7.27366411999943 6.58569075236836 6.85640619469696 6.8100008619876 6.37693597562397 7.47880242219908 7.5435323521023 7.40130386787708 7.13009286048292 7.44289550397544 7.34271993300762 7.01297832045973 7.47682007360855 6.48979350668243 0.140523984340924 0.142200971897084 0.136046964634468 0.133219396874068 0.132593141337298 0.134725312232296 0.141991892776586 0.138751524572182 0.141033071126470 0.145674372583135 0.138911553040483 0.132655242372982 0.137308980329246 0.146873236338193 0.137346445612198 0.140632392907631 0.140735922183604 0.133299379514182 0.137552390411834 5 5|0 -|/ 26095932 26096950 26096579.9 26095759 26097424 - gene protein_coding_gene TRUE TRUE AT5G65250.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10714.1) 0.749944319083296 8.08877799722059 7.51815010258037e-06 0.000218183315616978 12.2185425690056 13.9615791478032 0.749944319083296 0.0780154801985701 AT5G01650_at 10.3567658632828 10.4194755841358 11.1479591185288 11.0852574304697 11.2927396036030 10.9455541535466 10.2411704877849 10.2745735973189 10.1390708368374 10.1659283510256 10.7387643290706 10.7330174944956 10.8894521136573 10.8148390221248 10.7693813621429 10.8354784056904 10.7600142456362 10.6631175176114 10.1310095309634 0.104537909802113 0.103577239293929 0.104403233279024 0.107687660987191 0.103320232341438 0.106113800726981 0.107683540456253 0.111931398675710 0.115491027635842 0.112972658431146 0.103314232087578 0.101775051386863 0.101775051386863 0.106348625061819 0.103834734441423 0.103856947375644 0.10801789015508 0.10930117899423 0.105297111561502 5 5|0 -|/ 242735 243991 243470 242547 244108 - gene protein_coding_gene TRUE TRUE AT5G01650.1 macrophage migration inhibitory factor family protein / MIF family protein similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G57170.1); similar to Macrophage migration inhibitory factor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22330.1); contains InterPro domain Macrophage migration inhibitory factor; (InterPro:IPR001398) 0.712526507550649 8.08784237079707 7.52617502417056e-06 0.000218200160704889 12.2175219861361 21.1808591302901 0.712526507550649 0.06227985029728 AT5G20360_at 4.35814905046476 4.49512482245938 5.7368792170695 6.00655315495579 5.11718692381155 4.8745444642266 5.68330408535125 6.0203304954943 4.27467441129874 4.74704725844175 5.24535215428601 5.51487543872488 5.40952141133284 5.39421242894128 5.58173062585748 6.29566639129196 6.09721765570177 5.56952157871882 4.1021051668457 0.211103640526415 0.213585028023749 0.217854293421057 0.210665631724855 0.214199913984679 0.21556551250008 0.208319300470479 0.211717503232365 0.217473987412318 0.220038110683655 0.211774298547039 0.210386804580514 0.211578414797573 0.20931148289451 0.217547579971991 0.208632604399235 0.217624632295100 0.220531458103537 0.217700614342917 5 5|0 -|/ 6882189 6882754 6882565.6 6882123 6884632 - gene protein_coding_gene TRUE TRUE AT5G20360.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT4G32070.1); similar to Os08g0296900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061478.1); similar to putative octicosapeptide/Phox/Bem1p (PB1) domain-/tetratricopeptide repeat (TPR)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31284.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.779233545825793 8.08753704961098 7.52879578480866e-06 0.000218200160704889 12.2171889177836 10.2930696047969 0.779233545825793 0.0889084329840903 AT5G26770_at 4.98799525917884 5.68326887048294 7.15085146740767 7.03171412261726 7.67139323714363 6.82452751308116 5.32559068408679 5.10361460553528 5.53506594522878 5.27655042498866 6.41958620875327 5.56402927463915 6.60020123374522 5.28657319804427 5.39121031011794 6.01265387773006 5.69793958231878 5.71738905856792 5.41601223041653 0.236883984456886 0.247548897973033 0.249381694104854 0.245357344401188 0.254874458531490 0.250721949163702 0.237141121568905 0.236883984456886 0.247023422425695 0.242552934817471 0.236883984456886 0.240875022134757 0.240464984927693 0.246249947754224 0.237325819639874 0.239228375388685 0.247920216918192 0.236883984456886 0.236883984456886 5 5|0 -|/ 9408021 9408704 9408408.3 9407723 9410120 - gene protein_coding_gene TRUE TRUE AT5G26770.1|AT5G26770.2|AT5G26770.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05830.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD86886.1); similar to Os05g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054577.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) 1.16074626984319 8.08611563956867 7.54100961889184e-06 0.000218408148268200 12.2156381797740 11.8450731582088 1.16074626984319 0.194565631390877 AT5G20920_at 9.9408383324838 10.1119231186156 10.6271939374646 10.5814196656158 10.7921114230342 10.5671288211213 10.0706840927275 10.1123939325081 9.74173063380249 9.73433793191977 10.6492808634633 10.6260021818187 10.7385652389991 10.3228893700884 10.4969326800857 10.5076749054315 10.3940284161349 10.4356815473350 9.70931650762005 0.100110275629478 0.097123081178416 0.103547134877552 0.0991919769094705 0.0981836972006987 0.10931118039562 0.100995430688073 0.0983700127534646 0.107005718750865 0.109335493787162 0.103445643656007 0.0990728451775781 0.0981974535040953 0.106946410422275 0.100867236212237 0.0994662228572262 0.105194612736718 0.102186668621014 0.106187093848299 5 5|0 -|/ 7095007 7095925 7095481.9 7094720 7097118 - gene protein_coding_gene TRUE TRUE AT5G20920.1|AT5G20920.2|AT5G20920.3 EIF2 BETA (EMBRYO DEFECTIVE 1401) protein synthesis initiation factor eIF2 beta Identical to Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) [Arabidopsis Thaliana] (GB:Q41969;GB:Q8L7Q3;GB:Q9C5N7); similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G07920.1); similar to Translation initiation factor IF5 [Medicago truncatula] (GB:ABE94142.1); contains InterPro domain MscS mechanosensitive ion channel, C-terminal; (InterPro:IPR011066); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735)|Identical to Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) [Arabidopsis Thaliana] (GB:Q41969;GB:Q8L7Q3;GB:Q9C5N7); similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G07920.1); similar to eukaryotic translation initiation factor 2 beta subunit-like [Solanum tuberosum] (GB:ABB86256.1); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735) 0.687961901015345 8.083681133762 7.56197852327565e-06 0.000218769790877980 12.2129815866026 20.4753834612132 0.687961901015345 0.0500729923963957 AT5G01020_at 9.51447245344784 9.74656693813187 9.93397488421466 10.0604896423942 10.4632659551404 10.4478967123350 9.5021343070923 9.75631562881208 9.4876020685208 9.347276994194 10.5697603367024 10.3973259876446 10.3398641085990 10.2743630270632 10.3956242465000 10.3717187126303 10.0927818796084 10.2556742403134 9.67710373811052 0.0925122906379051 0.0925122906379051 0.0999260098836376 0.0940490078262875 0.0957040355579505 0.092661648494459 0.0947487623753695 0.0955470051615466 0.111687211567887 0.100885726131357 0.0958119408355962 0.0925122906379051 0.0938129753263692 0.0933916412418578 0.0942719090438184 0.0925122906379051 0.103583619114233 0.097396798457602 0.0966799531550733 5 5|0 -|/ 6323 7253 6640.6 5916 8443 - gene protein_coding_gene TRUE TRUE AT5G01020.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G05940.1); similar to Protein kinase APK1B, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95681.1); similar to Os11g0121400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065612.1); similar to Os12g0121100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066022.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.714839633545457 8.08349461833262 7.56358761657351e-06 0.000218769790877980 12.2127780260123 19.8487062323582 0.714839633545457 0.0635179437743268 AT5G54390_at 9.81614462826139 9.6941796566893 10.2710624139257 10.2298480792237 10.4879355786339 10.2434072962983 10.0282054835646 9.76463876888287 8.74399509870128 9.97827655456736 10.4967960813182 10.0992849335962 10.2162506305992 10.3766285301756 10.0372644546947 10.3639656351505 10.6389125601482 10.6078484415686 9.4658170476457 0.113969852170146 0.111208703020162 0.107519922545813 0.110536552750253 0.109737496141686 0.108703675945583 0.108152340376305 0.106846162441763 0.123139191928363 0.11245773460462 0.109075422018589 0.107996744023658 0.112867639911417 0.110249911693398 0.111527893201351 0.107889916728416 0.115939662270759 0.106840238629979 0.111308667709209 5 5 + 22104213 22104788 22104489.636 22103224 22105243 + gene protein_coding_gene TRUE TRUE AT5G54390.1 AHL (HAL2-LIKE); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. Identical to PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')- phosphohydrolase) (DPNPase) (Halotolerance protein) (AHL) [Arabidopsis Thaliana] (GB:Q38945;GB:O48892); similar to SAL1 (FIERY1), 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G63980.1); similar to Putative PAP-specific phosphatase [Oryza sativa] (GB:AAK98703.1); similar to Os02g0805500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048441.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.720430274552908 8.08193479059678 7.57705895524614e-06 0.000219013330624226 12.2110754806727 19.9422519758739 0.720430274552908 0.0660868480575747 AT5G53880_at 7.32614267268294 7.803125237963 8.09566521326334 7.96487865136926 9.77753330024825 9.02758766071019 8.26653487695826 8.09155794885449 8.9500146843342 9.54684845818032 11.2068804586663 10.9850892431004 10.3459027905011 10.5761973370995 10.9693959341254 10.4705046289121 9.31707966501518 10.3700031650661 9.53898910091527 0.191890483620145 0.185923363673667 0.182044197000051 0.203716858174236 0.173659757226105 0.172956816336744 0.179289006772389 0.182929272063737 0.180677800275672 0.174851485239034 0.178165169372462 0.177828009806841 0.176024491435972 0.181030902835992 0.178488775819685 0.177168526817649 0.185748045741922 0.174809731241801 0.173881580315389 5 5 - 21890340 21890397 21890355.455 21890020 21890529 - gene protein_coding_gene TRUE TRUE AT5G53880.1 unknown protein 1.01471179697528 8.07810473165183 7.6102471254331e-06 0.000219804382352404 12.2068937066009 18.2318360622332 1.01471179697528 0.158385474855979 AT5G59380_at 5.56202048778618 5.23585542715943 5.8731448856198 5.96095990711013 6.64263369345388 6.46780541101969 5.00663306849785 5.5723769551616 4.53682554032006 4.57108119489279 5.37546713491802 5.46049381413823 5.8822942210067 6.21737272137334 5.41009451311039 5.39819418948343 5.32771288527308 5.64087876746236 5.12493196425198 0.204678979194170 0.204074922696519 0.207884695985581 0.198644882297411 0.200970082685513 0.197372307122838 0.202555547133013 0.199321997736354 0.225925373277234 0.211168309095041 0.203907050886771 0.199641960428051 0.207884703787136 0.201754082114754 0.199076272907926 0.199832275583126 0.208471452317091 0.207544085494682 0.205343923070162 5 5 + 23969701 23970669 23970233 23969487 23970933 + gene protein_coding_gene TRUE TRUE AT5G59380.1 MBD6 (methyl-CpG-binding domain 6); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to MBD5 (methyl-CpG-binding domain 5), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46580.1); similar to PREDICTED: similar to methyl-CpG binding protein MBD2 [Pan troglodytes] (GB:XP_512139.2); similar to methyl-CpG binding domain protein 2 isoform 1 [Homo sapiens] (GB:NP_003918.1); similar to methyl-CpG binding domain protein 2 testis-specific isoform [Homo sapiens] (GB:NP_056647.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 0.868349227003512 8.07760767919878 7.61456568254253e-06 0.000219804382352404 12.2063508762163 10.9568502781431 0.868349227003512 0.117972799673392 AT5G40850_at 8.10888677348002 8.0858145391926 8.30564848070466 8.19605176976912 8.64231786848628 8.45913469041042 8.51674769639316 8.47549608261819 6.77534123251207 7.9551215800284 8.86249473076943 9.01576545352334 8.51702813371814 8.5008149796498 8.87450494228262 8.80567010625673 8.5599510579456 9.25550123719334 7.97257850509578 0.123068888709572 0.125344915764698 0.119003817948235 0.128599004293445 0.121894403424095 0.120474963607424 0.118019495687045 0.120343669223339 0.145426819886093 0.127485771737929 0.127556784773395 0.122110213082991 0.119376424974693 0.127922513147636 0.123474969626032 0.123517058106130 0.130640980785192 0.122964899882817 0.122858855528642 5 5|0 +|/ 16385080 16385909 16385481.375 16383698 16386327 + gene protein_coding_gene TRUE TRUE AT5G40850.1 UPM1 (UROPHORPHYRIN METHYLASE 1); uroporphyrin-III C-methyltransferase Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. similar to uroporphyrinogen III methyltransferase [Zea mays] (GB:BAA11909.1); contains InterPro domain Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; (InterPro:IPR000878); contains InterPro domain Uroporphyrin-III C-methyltransferase, C-terminal; (InterPro:IPR006366); contains InterPro domain Uroporphiryn-III C-methyltransferase; (InterPro:IPR003043); contains InterPro domain Uroporphyrin-III C-methyltransferase, plant; (InterPro:IPR012383) 0.66766891018846 8.07521581825305 7.63538403983862e-06 0.000220258687822211 12.2037382987493 16.5320856223215 0.66766891018846 0.0378359157262820 AT5G08415_at 5.92933142648671 6.3722470721951 6.6858592661289 6.60943032642777 7.21846283615684 6.74847099503328 7.44084641806562 7.51052915820004 5.70971303438607 6.15368865655653 8.02786328264766 8.23206159799937 7.53491845327881 7.98659368864286 8.21334696310866 7.07278875942729 7.24605096800422 8.02816738553492 6.41033713727811 0.219818391060555 0.201898178268617 0.199885543555652 0.203216522217135 0.206668137959130 0.208870100325548 0.203944627977050 0.199885543555652 0.227315929042988 0.211507056451443 0.201937166250475 0.199885543555652 0.205278770092679 0.207730810597953 0.207498103199606 0.199885543555652 0.211962317460336 0.19992210068492 0.211047061659674 5 5|0 -|/ 2710984 2712097 2711683.125 2710818 2713133 - gene protein_coding_gene TRUE TRUE AT5G08415.1 lipoic acid synthase family protein similar to LIP1 (Lipoic acid synthase 1), lipoic acid synthase [Arabidopsis thaliana] (TAIR:AT2G20860.1); similar to lipoic acid synthetase [Rattus norve (GB:NP_001012037.1); similar to Os05g0511500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056016.1); similar to Os01g0769100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044370.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Lipoate synthase; (InterPro:IPR003698); contains InterPro domain Elongator protein 3/MiaB/NifB; (InterPro:IPR006638) 0.851897474228368 8.07206684810678 7.66288601164578e-06 0.000220905063865926 12.2002976638819 13.7563822690388 0.851897474228368 0.113184056533226 AT5G57040_at 10.8066304731860 10.8916502331379 11.773701770228 11.8258772509511 11.8230008969627 11.7900727958417 11.7049976540387 11.6151378812570 11.0690354590213 11.5018830478568 12.2402656935571 11.9110258551973 12.0949509069943 12.1740250424705 11.8185933424712 12.3080501496289 12.2580682139830 12.1033128107908 11.5099023593337 0.0751132540530899 0.0696062888239016 0.072352899433046 0.0703512837940458 0.0708431292824137 0.0715520623838924 0.0725142987324648 0.069811648663315 0.084264357083356 0.0697887476471601 0.0719462079923135 0.0707086610627615 0.0706579944684766 0.0752062300608207 0.0719090704440698 0.0697744011263057 0.0762050912161802 0.0718005066693678 0.0708691462775667 5 5 - 23101264 23102318 23101617 23101126 23102472 - gene protein_coding_gene TRUE TRUE AT5G57040.1 lactoylglutathione lyase family protein / glyoxalase I family protein similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT1G80160.1); similar to Os07g0160400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058939.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC79640.1); contains InterPro domain Glyoxalase/extradiol ring-cleavage dioxygenase; (InterPro:IPR011588); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase; (InterPro:IPR004360) 0.650910998953494 8.06651625207388 7.71162396295453e-06 0.000222162363283271 12.1942299589473 23.265788681429 0.650910998953494 0.0239226895139959 AT5G61770_at 4.68980984758086 4.20571683869868 5.55976807124681 5.51646025514552 5.50876865917576 5.83667406753061 4.3485164632357 4.98565567610096 4.32772329360449 4.04417290282516 4.88475668128858 5.60614365491761 5.26072294507081 5.10820541931283 5.2563616919535 5.44352451110628 4.67624447301511 4.76878760249025 4.2651976434316 0.244532984751766 0.243132935289676 0.25068367556996 0.240307919316136 0.247388908270118 0.245104250200149 0.242445313023928 0.250313128319889 0.261704123225678 0.245776538362019 0.246390889636479 0.24040292070942 0.246233925009179 0.245905163950138 0.250445582245697 0.240307919316136 0.254846405907492 0.246437104514368 0.247971518570068 5 5|0 +|/ 24833842 24834394 24834189.889 24832834 24834932 + gene protein_coding_gene TRUE TRUE AT5G61770.1|AT5G61770.2|AT5G61770.3 brix domain-containing protein Identical to Peter Pan-like protein (PPAN) [Arabidopsis Thaliana] (GB:Q9ASU7;GB:Q9FLT1); similar to Brix [Medicago truncatula] (GB:ABE89071.1); contains InterPro domain Brix; (InterPro:IPR007109) 0.980610907988957 8.0653006943366 7.72234203147568e-06 0.000222323414402676 12.1929006452671 9.7504002276801 0.980610907988957 0.149838752985887 AT5G53940_at 7.75925028407045 7.83282370658397 8.33841017192464 8.38681312065358 8.80597276966233 8.35269615677874 8.08831165499264 7.7356074137031 7.23776160290711 7.65506393614564 8.30943636474026 8.59446502140741 8.2438886583836 8.36021272505455 8.8808965965998 8.36484304551824 8.33682700433416 8.09964072624468 7.28966118656349 0.160860989047177 0.153187428037844 0.163734445154997 0.155594457847894 0.15545905940278 0.158569422295410 0.155824768790059 0.159458586367964 0.187119380300982 0.167278988114036 0.152017496028172 0.151943796527137 0.164148746954602 0.175815489835721 0.152640887069495 0.154977179824243 0.163482933742615 0.166309865662471 0.165880526163204 5 5|0 -|/ 21914402 21915788 21914913.889 21914221 21915836 - gene protein_coding_gene TRUE TRUE AT5G53940.1 yippee family protein Identical to Protein yippee-like At5g53940 [Arabidopsis Thaliana] (GB:Q9FN32); similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT2G40110.1); similar to Protein yippee-like (GB:P59234); contains InterPro domain Yippee-like protein; (InterPro:IPR004910) 0.810794407915274 8.06079140870941 7.76224310920413e-06 0.000223323862480121 12.1879677603440 16.0589549146249 0.810794407915274 0.100552930077375 AT5G65830_at 1.86879180878712 2.14855263141634 2.89940709680142 2.98231853611736 3.69385740861970 3.01624025552905 2.9439872810954 2.96026605850435 2.42692327977005 2.13775176428438 3.00944175317061 3.10685894763988 3.43337835119114 2.94846578297737 3.22586425782849 3.62305331204344 3.25566562769942 3.23425806596071 1.7286268083825 0.187888438717862 0.190889935111675 0.196340359130800 0.210808558503158 0.191957786743092 0.191715211838060 0.190813365709808 0.195902949459943 0.194823956042761 0.20171628696809 0.192875436297652 0.19237301164041 0.190844302075087 0.200929723283855 0.190014924621877 0.187888438717862 0.206726720090737 0.192936913685989 0.197540164179872 5 5 - 26359627 26360188 26359969.364 26359342 26360547 - gene protein_coding_gene TRUE TRUE AT5G65830.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49750.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to Os09g0131200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062623.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.899706178742159 8.06000015017222 7.76926762908369e-06 0.000223377734887916 12.1871019106214 5.4778729078386 0.899706178742159 0.127705715764521 AT5G47710_at 6.30815710992916 6.30289571570395 6.90661668303074 7.42740052479647 7.23666879156683 7.51599411639898 6.38449127879923 6.56669780911816 6.18543196669203 6.26218600761284 7.22356229305659 6.87219643299202 7.3856207610532 7.34135048756185 6.64694353193697 7.08356976269496 7.40227324218774 7.0344927454095 6.5839677594577 0.196791656535294 0.188924132983251 0.198190871539156 0.195369592826665 0.196783654313273 0.200526491134022 0.193928686269866 0.194056192658549 0.195575902567874 0.197629720811009 0.189236641525593 0.198665026906925 0.187151244064498 0.186655244311416 0.192495098709200 0.190171390630014 0.207204975653647 0.186655244311416 0.192610190030019 5 5|0 +|/ 19347696 19348329 19348097.8 19346901 19348555 + gene protein_coding_gene TRUE TRUE AT5G47710.1|AT5G47710.2 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70790.1); similar to C2 domain containing protein [Brassica oleracea] (GB:ABD64985.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.83049939820902 8.05698957123214 7.79605737569324e-06 0.000223999438293096 12.1838068150841 13.5649217878508 0.83049939820902 0.107023550663639 AT5G62050_at 7.18786682063622 7.52986026846611 8.19741190154307 8.14922902173848 8.07093043507631 7.97993755260246 7.30951691242889 7.6973230697971 5.8400429185631 5.66851172895396 6.12930563920161 6.38656096494209 6.59646420522562 6.20188310644919 6.517781229203 6.39098213620535 7.06917991759383 6.60584880807444 5.26264129893689 0.222751541279915 0.217571082937868 0.218615051737158 0.218536953084270 0.220293499472367 0.222887467849711 0.219400370621459 0.215538736271168 0.214148308058636 0.218783109116431 0.213686748971531 0.213209098422449 0.220951812853852 0.219403862210256 0.220891001739018 0.211837294312999 0.227776991537678 0.21782685739916 0.231608174988734 5 5 - 24941356 24942197 24941709.727 24941000 24944538 - gene protein_coding_gene TRUE TRUE AT5G62050.1 OXA1 (Oxidase assembly 1); protein translocase essential factor for protein sorting and assembly into membranes Identical to Inner membrane protein OXA1, mitochondrial precursor (Oxidase assembly 1 protein) (AtOXA1) (OXA1) [Arabidopsis Thaliana] (GB:Q42191;GB:Q42190); similar to OXA1 protein, putative [Arabidopsis thaliana] (TAIR:AT2G46470.1); similar to putative Oxa1 protein [Oryza sativa (japonica cultivar-group)] (GB:AAG13422.1); similar to Os10g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065089.1); contains InterPro domain 60 kDa inner membrane insertion protein; (InterPro:IPR001708) 0.782543780975953 8.05340459036961 7.82808875613637e-06 0.000224690995799424 12.1798815616833 13.8040841976260 0.782543780975953 0.0912368131041192 AT5G13450_at 10.4824501231634 10.7435502148938 11.2377965196513 11.4145521135339 10.9426731348266 10.9378175762946 10.7069492706277 10.8712038116802 9.88498211925539 10.4099775760072 11.1499872164287 11.3830818922953 11.0983329631736 10.9965531747597 11.3222402205965 11.1558653687570 10.9522370129618 11.1531865653907 10.2086787947005 0.0834682562692627 0.0812784421987495 0.08441725146562 0.081370811580381 0.0812784421987495 0.0832505338731143 0.0812784421987495 0.088115939160221 0.107582751721076 0.0826364028105351 0.0835512461161459 0.0812784421987495 0.0812784421987495 0.0881256829085627 0.0847247588728352 0.0812784421987495 0.0915741335228697 0.0848898324402349 0.0852217020380393 5 5|0 -|/ 4310570 4311342 4311002 4310317 4312051 - gene protein_coding_gene TRUE TRUE AT5G13450.1|AT5G13450.2 ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative Identical to ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) [Arabidopsis Thaliana] (GB:Q96251;GB:Q93W68;GB:Q9LYR1); similar to ATP synthase delta chain, chloroplast, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative [Arabidopsis thaliana] (TAIR:AT4G09650.1); similar to ATP synthase delta chain, mitochondrial precursor (Oligomycin sensitivity conferral protein) (OSCP) (GB:P22778); contains InterPro domain ATPase, F1 complex, OSCP/delta subunit; (InterPro:IPR000711)|Identical to ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) [Arabidopsis Thaliana] (GB:Q96251;GB:Q93W68;GB:Q9LYR1); similar to ATP synthase delta chain, mitochondrial precursor (Oligomycin sensitivity conferral protein) (OSCP) (GB:P22778); contains InterPro domain ATPase, F1 complex, OSCP/delta subunit; (InterPro:IPR000711) 0.707863768063193 8.05313637608903 7.83049093141664e-06 0.000224690995799424 12.1795878251935 21.5767816198088 0.707863768063193 0.0615303464809579 AT5G67130_at 6.49791118025158 6.32487455349034 6.27128801450887 6.36159744015127 7.63436867348983 7.15444535468484 6.10610304130851 6.02157432778266 5.71668244271843 6.05023799551222 7.17211177553917 7.54320919318891 7.15620811881049 6.91644270912406 7.12970269636897 7.03982709360989 6.89830823713205 6.58867853733036 6.56572135857826 0.232144483896618 0.225798443191634 0.241098918854913 0.234490846197148 0.242018561958283 0.238454208951071 0.231937925382820 0.229390714595046 0.248231977424421 0.242361760524316 0.229551465528432 0.225798443191634 0.236208392043065 0.233628966079698 0.243558293839543 0.227514355468829 0.234731059616082 0.237398645737365 0.237562271480901 5 5|0 +|/ 26810200 26810820 26810530.5 26808572 26811108 + gene protein_coding_gene TRUE TRUE AT5G67130.1 phospholipase C Identical to PI-PLC X-domain containing protein At5g67130 precursor [Arabidopsis Thaliana] (GB:Q93XX5;GB:Q8LAF6;GB:Q9FHA0); similar to phospholipase C [Arabidopsis thaliana] (TAIR:AT4G36945.1); similar to Os09g0115600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062585.1); similar to MAP3K-like protein kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96605.1); similar to Os03g0415200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050364.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909) 0.781244770601059 8.05155949517069 7.8446298805005e-06 0.000224947830539423 12.1778607133404 13.1297411452456 0.781244770601059 0.0908444621703377 AT5G62600_at 6.57813866132764 6.83639421923796 7.24217665288255 7.36485729923347 7.59125491149401 7.07670408709191 5.90812468535359 6.32139686170026 6.72120360777334 6.55385341858936 7.68258656220378 8.04808541795653 7.44121601146762 7.73325825373507 7.45125946364938 7.79194780227811 7.4046335554748 7.06424179033962 6.85507794444243 0.207451549462911 0.203701756099643 0.208724619431405 0.204926531460076 0.198237037247002 0.206309911776398 0.211089044939343 0.198237037247002 0.237051544615953 0.209335404798281 0.205497186268486 0.202181667719503 0.198237037247002 0.213744537906643 0.203641636890791 0.201882247139524 0.217262853161773 0.203775812739003 0.20510377180876 5 5|0 -|/ 25140567 25141297 25140976.2 25140277 25149902 - gene protein_coding_gene TRUE TRUE AT5G62600.1 transportin-SR-related similar to importin-related [Arabidopsis thaliana] (TAIR:AT1G12930.1); similar to Os10g0477800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064858.1); similar to Importin-beta N-terminal domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54280.2); similar to nuclear transportin [Triticum aestivum] (GB:AAY84877.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1-like; (InterPro:IPR013598); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 0.887421623820184 8.05029918407084 7.85595017607697e-06 0.000225123553204537 12.1764801085035 14.0084802209934 0.887421623820184 0.124467444113811 AT5G19010_at 9.75245711986047 9.67698947374016 10.3442236751669 10.4771282398994 10.5736323142661 10.3714858142746 9.90169018981935 9.89042835484111 9.6037407804962 9.67202541101911 10.3911601336984 9.95227036130785 10.3259044346558 10.4182382714304 10.1667244966764 10.4567726313161 10.4827442346560 10.3955262863899 9.55748552489948 0.0741758809494557 0.0742385187668162 0.0748599083661109 0.0726413733757687 0.073079115237327 0.0795532076308647 0.0756517624363739 0.0765001717635587 0.0874125509903629 0.0773063519865429 0.0783345607436569 0.0726413733757687 0.0770872197053761 0.0747678868213834 0.0757331358207224 0.0730930324049824 0.0761013906734362 0.0759585653973965 0.0785060099299915 5 5|0 -|/ 6345174 6345911 6345536.333 6344791 6348214 - gene protein_coding_gene TRUE TRUE AT5G19010.1 MPK16 (mitogen-activated protein kinase 16); MAP kinase member of MAP Kinase Identical to Mitogen-activated protein kinase 16 (EC 2.7.11.24) (MAP kinase 16) (AtMPK16) (MPK16) [Arabidopsis Thaliana] (GB:Q8W4J2); similar to ATMPK8 (Arabidopsis thaliana MAP kinase 21), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G18150.1); similar to ATMPK20 (Arabidopsis thaliana MAP kinase 20), MAP kinase [Arabidopsis thaliana] (TAIR:AT2G42880.1); similar to MPK9 (MAP KINASE 9), MAP kinase [Arabidopsis thaliana] (TAIR:AT3G18040.1); similar to double HA-tagged mitogen activated protein kinase 16 [synthetic construct] (GB:ABG54343.1); similar to Mitogen-activated protein kinase 14 (MAP kinase 14) (GB:Q75KK8); similar to mitogen activated protein kinase 6 [Zea mays] (GB:AAQ94319.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.674404963565614 8.04716647187631 7.8841652040357e-06 0.000225782866821750 12.1730475289258 20.0908801536025 0.674404963565614 0.0438989663656421 AT5G35750_at 6.66675943664057 6.62271261566815 7.16074850612473 6.97390414523698 8.53079158088016 8.3375507282849 6.56089511045739 7.20097156165177 7.28290233510297 6.96610441799877 8.30889771717442 7.71188947971508 8.25217121792747 8.19707772997308 7.80647120837935 7.96640027786675 7.72784016717674 7.71721206120616 7.36172712606406 0.189355834733674 0.184277122689771 0.195324441859265 0.182968557712268 0.187353402286936 0.188045462323779 0.183809933806993 0.189782691455082 0.19068254223029 0.191240187306425 0.188210561118711 0.187484918528245 0.184203872385894 0.182563646884988 0.189330860259701 0.181039306590576 0.189666938784363 0.191772042909966 0.184464331611103 5 5 - 13928994 13929608 13929328.727 13928601 13933567 - gene protein_coding_gene TRUE TRUE AT5G35750.1 AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) Encodes histidine kinase AHK2. similar to AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Arabidopsis thaliana] (TAIR:AT1G27320.1); similar to WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana] (TAIR:AT2G01830.1); similar to cytokinin receptor [Catharanthus roseus] (GB:AAM14700.1); similar to histidine kinase 3 [Zea mays] (GB:BAD01585.1); similar to cytokinin receptor histidine kinase [Oryza sativa (japonica cultivar-group)] (GB:BAE97709.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase A, N-terminal; (InterPro:IPR003661); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain CHASE; (InterPro:IPR006189); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase related protein, C-terminal; (InterPro:IPR004358); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.872665540866331 8.04260973096257 7.92540155184366e-06 0.000226813962109406 12.1680524270292 14.8390781816927 0.872665540866331 0.120380738476976 AT5G47010_at 7.38079916968106 7.259943455733 7.99632283036369 8.15869428787383 8.57075153752395 7.96069031337169 7.33507076727089 6.68163834797372 7.35561927040005 6.75116194340768 7.85438943718562 8.26820563495061 8.07410601451777 8.22107317660822 8.19239004713777 8.44308038354344 7.9566559103935 8.23243283923815 7.31569676916006 0.170562742918000 0.156837448074930 0.162150965937325 0.157650372632668 0.161705548006429 0.161779047210261 0.176914909606145 0.167535580842942 0.168377439757171 0.162859662860764 0.157241072423403 0.153175912009258 0.153175912009258 0.167845144377196 0.158354744555655 0.156746879646475 0.172911809325983 0.153175912009258 0.164614461698233 5 5|0 +|/ 19094859 19096029 19095509.875 19089236 19096561 + gene protein_coding_gene TRUE TRUE AT5G47010.1 LBA1/UPF1 (LOW-LEVEL BETA-AMYLASE 1); RNA helicase Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. Identical to Regulator of nonsense transcripts 1 homolog (EC 3.6.1.-) (ATP- dependent helicase UPF1) (UPF1) [Arabidopsis Thaliana] (GB:Q9FJR0;GB:Q8S3K7); similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G03270.1); similar to PREDICTED: similar to regulator of nonsense transcripts 1 [Bos taurus] (GB:XP_612154.2); similar to type 1 RNA helicase pNORF1 (GB:AAC51140.1); similar to putative type 1 RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD30435.1); contains InterPro domain Type III restriction enzyme, res subunit; (InterPro:IPR006935) 1.01085874662146 8.04031945447922 7.94621543717614e-06 0.000227259620189603 12.1655408469849 15.3160476761087 1.01085874662146 0.158618474078735 AT5G63190_at 10.2663617327510 10.2147697325824 10.6637183556460 10.7510512629559 11.2520585615874 11.2527497088137 9.3498975462365 9.52892125428426 10.310903121643 9.76782274071455 10.2892429606982 10.2446525561483 10.4176683268400 10.2455804072638 10.1828690243803 10.7125487524067 10.4487194836549 10.2099434516452 10.4043079789596 0.0765778732371039 0.0763162679290722 0.076911233803799 0.0784858006938522 0.0796241864871195 0.0804813238514296 0.0769277366953247 0.0763131339051085 0.0822690149023125 0.08036733779821 0.0745437222096348 0.076381224538551 0.0767469445077466 0.0762934698516803 0.0742021087191336 0.0735535112367851 0.0784971163609944 0.0763749327654608 0.0765918520684421 5 5 + 25365216 25365740 25365461.727 25362768 25366022 + gene protein_coding_gene TRUE TRUE AT5G63190.1|AT5G63190.2 MA3 domain-containing protein similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48390.1); similar to H0525D09.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66971.1); similar to Os08g0120500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060879.1); similar to OSJNBb0011N17.20 [Oryza sativa (japonica cultivar-group)] (GB:CAD41103.2); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) 0.661399372863915 8.03582085991681 7.9872705568327e-06 0.00022828320296071 12.1606056597254 20.6623982197665 0.661399372863915 0.0356083833485959 AT5G06120_at 6.41017341162644 6.55947713805212 7.6160422155361 7.50664430321449 7.97107180013879 7.30531359994195 6.92697712599692 6.78020565871833 6.91514841855625 6.15699013068012 7.5693378879681 7.30395576425524 7.36745677275864 7.41938071195073 7.06853883752388 7.45560916484554 7.41916699894921 7.18816373654922 6.49751882910992 0.190949957187400 0.179442911752688 0.179044873294313 0.175620667931896 0.181848340443044 0.196097036143341 0.175696742958733 0.173181125017799 0.179487644349794 0.182463207337003 0.174001681191087 0.176009402371457 0.176089615267204 0.180468609589971 0.17365593942124 0.175162693944227 0.183249149146226 0.177771178354382 0.179272402800237 5 5|0 +|/ 1851656 1852567 1852043.2 1844079 1852602 + gene protein_coding_gene TRUE TRUE AT5G06120.1 Ran-binding protein, putative similar to putative RAN binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77036.1); similar to exportin 7 [Gallus gallus] (GB:NP_001012960.1); similar to Importin-beta N-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97640.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 0.87814587717201 8.03482202043847 7.99641724039718e-06 0.000228394066799776 12.1595095393425 14.0705733368859 0.87814587717201 0.122250026977200 AT5G25100_at 8.39386658874607 8.84048009127854 9.1896502666114 9.43882125498936 9.55525912088458 9.35903229518489 9.17825493373901 9.48699849111509 8.43332145190384 8.4890190371388 9.93186426047347 9.87576378743164 9.8572184237375 9.41825110471452 9.72722099707778 9.49738787154744 9.32010767046235 9.6064247368464 8.27031785339263 0.157558462292652 0.146675169453936 0.153712719855960 0.152322941787395 0.149863157087724 0.156346346248881 0.146580916218044 0.149897917515954 0.163518735733442 0.170986360192142 0.152302571269137 0.147749815320287 0.151190546584844 0.156231952392465 0.151839618915146 0.146133229462552 0.150757245488132 0.160920621076577 0.154907561878924 5 5 - 8648388 8648942 8648607.727 8648106 8651140 - gene protein_coding_gene TRUE TRUE AT5G25100.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT5G10840.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G24170.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT3G13772.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10383.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD54580.1); similar to Nonaspanin (TM9SF) [Medicago truncatula] (GB:ABE93901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) 0.833758891961257 8.03353584320995 8.00821184145132e-06 0.000228580364831027 12.1580979128244 18.2062116989927 0.833758891961257 0.108815109395148 AT5G18500_at 7.23671696390744 7.26768507520662 7.13214802839289 7.21117479298032 7.85468605317301 7.46910805422235 7.49397717632321 7.38986653837901 8.11670878849626 7.4669042186127 10.1056564992101 9.65639431228382 8.94267354791314 9.5960939636037 9.27884995052531 8.9762540514799 7.98235287250314 8.96759883716743 7.83294173668949 0.191868075482588 0.192773226533975 0.198101345441698 0.199562118357528 0.195135223154960 0.211053616189796 0.197720700303657 0.192761806274392 0.208771504074477 0.198068377700375 0.194097543548077 0.192996605356154 0.195424828529609 0.194482997422388 0.189580009418269 0.189008386009980 0.205586426320235 0.190570120109862 0.193645139247657 5 5|0 +|/ 6140459 6141249 6140913.5 6138385 6141632 + gene protein_coding_gene TRUE TRUE AT5G18500.1|AT5G18500.2 protein kinase family protein|kinase similar to GPK1 (Glyoxysomal protein kinase 1), kinase [Arabidopsis thaliana] (TAIR:AT3G17420.1); similar to putative receptor-like protein kinase 3 [Glycine max] (GB:AAU10525.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.726216900070535 8.02831613389072 8.05627135417627e-06 0.000229800855048498 12.1523669708902 15.8787965864574 0.726216900070535 0.070659232557853 AT5G54610_at 9.49068210356384 10.1065768957394 11.5379270496441 11.2651434195296 10.4522838227825 9.7611207381941 9.01405916171113 8.816146208595 9.46934296767057 8.00530011722566 9.36607293237356 8.72609416175606 9.51470760844711 9.8425649935178 7.45234866924645 9.73105451769245 9.60220070285436 10.2589109284054 8.32536398418353 0.183737955094228 0.176416755160143 0.190269060125919 0.183529712024486 0.186954247011944 0.186550079528241 0.180290600090603 0.181067435534034 0.18521046386492 0.185012997136900 0.188792063354761 0.189938501990719 0.176416755160143 0.192333113590337 0.199048457236699 0.176416755160143 0.182599098711644 0.185141285874114 0.188448682321600 5 5 - 22202021 22202535 22202268.909 22202005 22203751 - gene protein_coding_gene TRUE TRUE AT5G54610.1 ANK (ANKYRIN); protein binding Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54620.1); similar to Ankyrin [Medicago truncatula] (GB:ABE88815.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 1.05449731153098 8.02094072139685 8.12471123426327e-06 0.000231600697343289 12.1442633872501 19.0113657602932 1.05449731153098 0.170492946301101 AT5G46150_at 4.78378535168348 5.43453345821387 5.69108620649919 6.1742919244525 7.50811689616627 6.43085402435448 5.18562837816033 5.23523547853142 5.25323265175891 4.54853191553684 6.35649405069373 6.13410072546554 6.08738623058397 6.65084921697474 5.96747767063531 6.50013437650948 5.95631295483776 6.07057610538363 4.82584516626978 0.251437291219097 0.250298209806356 0.258010742796577 0.251880191779582 0.246820045312268 0.258963897187492 0.264406240561243 0.246820045312268 0.272427400579772 0.249974632707932 0.246820045312268 0.248388904978378 0.252833318571536 0.246820045312268 0.247436340226683 0.246820045312268 0.257399517391131 0.263997507895807 0.252676621189111 5 5 - 18726093 18726660 18726350.636 18724873 18727820 - gene protein_coding_gene TRUE TRUE AT5G46150.1|AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Arabidopsis thaliana] (TAIR:AT3G12740.1); similar to LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Arabidopsis thaliana] (TAIR:AT1G54320.1); similar to Os03g0785500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051483.1); similar to Os02g0173800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046043.1); similar to hypothetical protein [Lotus japonicus] (GB:BAD32828.1); contains InterPro domain Protein of unknown function DUF284, transmembrane eukaryotic; (InterPro:IPR005045) 1.31541905070892 8.02035941547546 8.13013209215934e-06 0.000231602952584033 12.1436244001601 11.3510846285447 1.31541905070892 0.233458183316078 AT5G67310_at 1.37417891281956 1.46503017738725 3.08754276480572 3.49100941576196 1.43034597789027 1.59442142044116 0.824749319675802 0.867142729860922 0.756631087714953 1.00980489187955 1.53415781107649 1.1475718605753 0.770785073784161 1.11474989799940 1.2480174761577 1.34879379855171 0.68542184237502 0.80399476127252 0.8332718292681 0.207926580751305 0.208871966331003 0.209158787860162 0.230075559596427 0.203226034197141 0.203079601640891 0.203079601640891 0.203079601640891 0.206538815444046 0.205786967136105 0.203079601640891 0.218125274947601 0.205979868973836 0.204280311108709 0.210678150894583 0.203079601640891 0.208810342976363 0.209919267380298 0.211978277025246 5 5 - 26872581 26873093 26872806.909 26872442 26874167 - gene protein_coding_gene TRUE TRUE AT5G67310.1 CYP81G1 (cytochrome P450, family 81, subfamily G, polypeptide 1); oxygen binding member of CYP81G similar to CYP81D1 (CYTOCHROME P450 91A1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G36220.1); similar to cytochrome P450 [Cicer arietinum] (GB:CAB43505.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.74158595269603 8.01699923291495 8.16154352981111e-06 0.000232345111982703 12.1399299689996 2.74093050725278 0.74158595269603 0.0773454152514681 AT5G12420_at 5.68827416452631 5.49861464263576 3.25808258086232 3.01663833769588 6.9437280375041 6.86519402220969 1.16276245906159 1.44012710180938 1.92097126457753 2.64453873260727 2.01499123562694 1.84535876107285 0.986908754295796 2.07078484290826 1.93002140822335 1.88234110589508 1.55674515453034 1.58904382979313 0.97971797979564 0.26944884653102 0.265647904220626 0.248906832381589 0.261377157772456 0.257156296420431 0.26036253492128 0.250563354237624 0.246255278464450 0.261533398647145 0.242762111110652 0.252091098674838 0.245988033536568 0.247266803867153 0.252956414038687 0.245946952768759 0.244220127454138 0.250255641275954 0.257907821534017 0.251318820404340 5 0|5 /|- 4024634 4025163 4024955.625 4024315 4026742 - gene protein_coding_gene TRUE TRUE AT5G12420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16350.1); similar to Protein of unknown function DUF1298 [Medicago truncatula] (GB:ABE82755.1); contains InterPro domain Protein of unknown function UPF0089; (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298; (InterPro:IPR009721) 0.729790606721404 8.00902363733768 8.23662678501787e-06 0.000234316349026360 12.1311553578896 6.02564452438981 0.729790606721404 0.0728814520474755 AT5G38510_at 9.55666241332286 9.80895299655906 10.8550272610781 10.7446657281113 10.990901241446 10.7081668293198 10.5413210433703 10.4231858829613 9.75971522994292 9.76222726255939 10.3356055188014 10.0733389013642 10.6011637606967 10.7745581567556 9.94613778360048 10.5497880591265 10.2765451613269 10.5168107532258 9.50167615311527 0.128888216568117 0.12495433392646 0.132007275861088 0.129996423144822 0.127678818968392 0.13350507074684 0.131699372329685 0.125323906492745 0.139379787251438 0.131846419108917 0.127475250932326 0.133540974755622 0.129171916606504 0.125149901072073 0.129680569916364 0.128611607437467 0.133613467921586 0.12495433392646 0.135013696828404 5 0|5 /|- 15435087 15436052 15435293.5 15434963 15437836 - gene protein_coding_gene TRUE TRUE AT5G38510.1|AT5G38510.2 rhomboid family protein similar to rhomboid family protein [Arabidopsis thaliana] (TAIR:AT1G12750.2); similar to Predicted inosine-uridine preferring nucleoside hydrolase (ISS) [Ostreococcus tauri] (GB:CAL53978.1); similar to Os02g0326700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046708.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) 0.72593182212923 8.00849862268556 8.24159545655048e-06 0.000234316349026360 12.1305774665735 20.4830019547218 0.72593182212923 0.0712945037938811 AT5G04510_at 6.1826974221141 6.00729466113375 6.90642815082966 6.35433085211301 7.45576631337343 7.19745918146761 6.42159577630137 5.84613498086535 6.65033221111149 6.3051007696195 7.71053686728782 7.72097084900354 7.26710711765669 7.44982113829295 7.62583738582348 7.14464619362577 7.20147730589029 7.15188664945845 6.05911799429508 0.199801426525501 0.193328299521187 0.195806283849571 0.201475499742449 0.187442741229774 0.187804867055884 0.194806250084819 0.193907619038888 0.206160749213318 0.195894936714131 0.190176290725984 0.187442741229774 0.193652583916718 0.192908034683082 0.188957414546590 0.189621613806171 0.193702506210515 0.194916898338334 0.197956846505898 5 5 + 1288860 1289658 1289234 1286908 1289909 + gene protein_coding_gene TRUE TRUE AT5G04510.1|AT5G04510.2 PDK1 (3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); kinase Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation. similar to 3-phosphoinositide-dependent protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G10540.1); similar to 3-phosphoinositide dependent protein kinase 1 [Zea mays] (GB:ABB71956.1); similar to 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (GB:AAW38936.1); similar to Os01g0872800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044948.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to 3-phosphoinositide-dependent protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G10540.1); similar to 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (GB:AAW38936.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.967458597190067 8.00705997876123 8.25522720406186e-06 0.000234550109142977 12.1289937532359 13.4200729656357 0.967458597190067 0.148207479311809 AT5G10180_at 9.54191617749973 9.80135430167515 11.1151790296879 11.1450826901514 11.0919658572758 10.1865802594922 10.9005496161582 10.7478239847608 9.35665861202411 10.3368203714686 11.6433248143342 11.235647456461 11.2882782956282 11.6457820838094 10.8031795902555 11.1852528961129 11.2375630316988 11.6983845716603 10.052187212653 0.113528816776295 0.109295758209026 0.116969481239248 0.109756997515764 0.110219276250612 0.122681979781947 0.110402664533613 0.109977588716637 0.125810491016341 0.111023229094788 0.110639490757121 0.109295758209026 0.109295758209026 0.111435659644185 0.112664871396209 0.109295758209026 0.116146859600866 0.114128698921039 0.113421408716238 5 5|0 +|/ 3195629 3196774 3196056.111 3193145 3197121 + gene protein_coding_gene TRUE TRUE AT5G10180.1 AST68 (Sulfate transporter 2.1) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. Identical to Sulfate transporter 2.1 (AST68) (SULTR2;1) [Arabidopsis Thaliana] (GB:O04722); similar to SULTR1,2 (SULFATE TRANSPORTER 1,2) [Arabidopsis thaliana] (TAIR:AT1G78000.2); similar to SULTR1,1 (sulfate transporter 1,1), sulfate transporter [Arabidopsis thaliana] (TAIR:AT4G08620.1); similar to AST56 (sulphate transporter 2,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT1G77990.1); similar to plasma membrane sulphate transporter [Brassica oleracea var. acephala] (GB:CAG17931.1); similar to 80A08_15 [Brassica rapa subsp. pekinensis] (GB:AAZ67600.1); similar to 4D11_19 [Brassica rapa subsp. pekinensis] (GB:AAZ67533.1); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) 1.03187273312074 8.00604864252536 8.26482461756815e-06 0.000234669013390462 12.1278802810960 21.1950058185261 1.03187273312074 0.165197022016842 AT5G59030_at 9.78689148153663 10.1723518377340 10.5293405684390 10.5716012569619 11.2162456172679 11.0640942458901 9.85920526588016 10.0678512751554 10.0101889568378 9.42433728490458 10.4528481100492 10.3180996081953 10.5256463125745 10.3615237347889 9.9127855676241 10.3716256656067 10.4387076729370 10.3186469782969 9.70777451529579 0.108541936763439 0.100148445358908 0.101315509612478 0.0996858692360218 0.100936471502809 0.104758689959776 0.0994977970711635 0.0997374494902519 0.105553929356055 0.101869429174253 0.0982999329264684 0.0969937402179377 0.099772382368685 0.100338457221315 0.100954379801636 0.098398916616374 0.098967400651669 0.101385258577862 0.0972412401175052 5 5 - 23851186 23851644 23851389.636 23850954 23851737 - gene protein_coding_gene TRUE TRUE AT5G59030.1 COPT1 (COPPER TRANSPORTER 1); copper ion transporter encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains Identical to Copper transporter 1 (COPT1) [Arabidopsis Thaliana] (GB:Q39065); similar to COPT2 (Copper transporter 2), copper ion transporter [Arabidopsis thaliana] (TAIR:AT3G46900.1); similar to putative copper transporter protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56072.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) 0.74856533048809 8.00143482570162 8.30876221099882e-06 0.000235762168912656 12.1227988842066 20.4342405479107 0.74856533048809 0.0806235749780065 AT5G16840_at 8.968269311298 9.0689557337054 9.62256572342583 9.61727983034644 9.62197490991313 9.66437317383708 9.06184629704059 9.17451047349523 8.52592065177626 8.63503070821701 9.22952731999939 9.24907034796705 9.53810136539804 9.38536135487185 9.07370749029628 9.32549528424677 9.24026611966312 9.23119777979556 8.48859969077 0.114295096264396 0.110774184089336 0.116134385962052 0.113332802115492 0.114374008781930 0.116231477191253 0.112060463496796 0.109657975299488 0.116030387605377 0.111337620111336 0.113871412710284 0.112342005752769 0.111364163081468 0.118833818420953 0.110568034885335 0.113829295585115 0.114461489286255 0.111552757958806 0.114430477789438 5 0|5 /|+ 5537343 5537991 5537778.222 5535872 5538253 + gene protein_coding_gene TRUE TRUE AT5G16840.1|AT5G16840.2|AT5G16840.3 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G17720.1); similar to Os06g0112400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056594.1); similar to putative RNA recognition motif (RRM)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67779.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.648696744010572 8.00058740736996 8.31685961855603e-06 0.000235837589894338 12.1218652955862 18.2669425481498 0.648696744010572 0.0271737295716712 AT5G10210_at 1.31172550139252 1.22813681703907 2.58047593878721 2.98072726910584 2.12216522308504 2.72709138448916 1.75524860370334 1.76433706856826 1.22678048005925 1.57328803831193 2.17214987226165 1.06857376813493 2.22182921797153 2.10387626989647 1.31861069807765 2.11298198501919 2.65874871720676 2.74938037244394 1.28633139412156 0.196889530538209 0.200462416157821 0.209002652324848 0.205393993500504 0.196889530538209 0.196889530538209 0.201286322999184 0.201906750976787 0.209097866638417 0.201800137544821 0.196889530538209 0.204349848113314 0.201493633919504 0.197486849449873 0.203547002860719 0.196889530538209 0.209200096271104 0.204687071220466 0.209552216009783 5 5 + 3206241 3206801 3206411.091 3206141 3207137 + gene protein_coding_gene TRUE TRUE AT5G10210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65030.1); similar to 80A08_18 [Brassica rapa subsp. pekinensis] (GB:AAZ67603.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.88819425732664 7.99827042812248 8.33904280856784e-06 0.000236312075663595 12.1193122532032 3.76518955916669 0.88819425732664 0.126366223833525 AT5G23440_at 8.41337441131643 8.50885881612042 9.16871566349663 9.13938332031516 9.32703285504843 8.87009316017785 8.99021366710764 8.75431449902155 8.4044398322388 8.3757951172487 9.71695607327804 9.39208744631788 9.42183854531112 9.48533856398344 9.32463046763379 9.5988495848979 9.3057494715173 9.26100887979826 8.26067419019932 0.139281702078434 0.14008460493155 0.138135873307248 0.133020604411672 0.129856986770226 0.137097218509136 0.132514992321674 0.138310131667214 0.147152602370382 0.139956400247763 0.143282549340518 0.134839488746035 0.129856986770226 0.138208921619662 0.138819325923415 0.131757713882385 0.136505482393881 0.139636252385002 0.139703738051302 5 5 - 7903277 7903755 7903521.727 7903048 7903848 - gene protein_coding_gene TRUE TRUE AT5G23440.1 FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1); ferredoxin:thioredoxin reductase similar to FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2), ferredoxin:thioredoxin reductase [Arabidopsis thaliana] (TAIR:AT5G08410.1); similar to Os02g0638300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047533.1); similar to ferredoxin-thioredoxin reductase SU A [Spinacia oleracea] (GB:CAA54407.1); contains InterPro domain Ferredoxin thioredoxin reductase, alpha chain; (InterPro:IPR004207); contains InterPro domain Electron transport accessory protein; (InterPro:IPR008990) 0.775476783615642 7.99764130609067 8.34507717109349e-06 0.000236328614485142 12.1186189174981 17.7891368452361 0.775476783615642 0.0906548735525207 AT5G04710_at 7.6889152713228 7.72359643049954 8.64096633776863 8.44245624764687 8.69158189885401 8.37338336373426 8.08025206487391 7.88688604794455 7.24636532197482 7.61373829963622 8.06378353236558 8.29520781695838 8.12592600462999 8.06288025826196 8.51269908391413 8.48195462776874 7.93569548187266 8.08009647375644 7.42300414083536 0.179339160702972 0.173282219073227 0.179981155314230 0.173405907213105 0.177323596874563 0.180366445626935 0.178463865712098 0.175446535704354 0.198286002487758 0.186426704802038 0.183667815896705 0.173282219073227 0.173954466917116 0.185040462889919 0.176530443521785 0.176935651917740 0.182223289895131 0.179450728296887 0.179469073462095 5 5|0 -|/ 1357307 1358148 1357766.9 1356991 1360248 - gene protein_coding_gene TRUE TRUE AT5G04710.1 aspartyl aminopeptidase, putative similar to aspartyl aminopeptidase, putative [Arabidopsis thaliana] (TAIR:AT5G60160.1); similar to Peptidase M18, aminopeptidase I [Medicago truncatula] (GB:ABE80427.1); similar to Os01g0967900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045513.1); contains InterPro domain Peptidase M18, aminopeptidase I; (InterPro:IPR001948) 0.729631165399798 7.99700337182323 8.35120087654016e-06 0.000236347660213014 12.1179158194219 16.0022462065421 0.729631165399798 0.0732677075045422 AT5G49700_at 1.60980388603846 1.16802648824179 2.62435216027048 2.46932293380595 2.87096301923151 2.32053233491806 1.68820397691746 1.13810918939023 2.25701013854556 1.42455907438154 2.37730127835034 2.40931340330169 2.83471754409859 1.93855129497222 2.72446573311670 2.942948549836 3.24721299348272 2.56949654799788 1.72379984350425 0.247444765744814 0.242792826478565 0.250581961785593 0.256044462223665 0.242903124041129 0.260899734721991 0.250553303988966 0.254418386479623 0.249516608866054 0.242384504049667 0.246397463787304 0.242671519697957 0.250603277908931 0.245263840569808 0.24162926755592 0.242717775588593 0.253405930070966 0.248923124738756 0.253645982825172 5 5 + 20210142 20210610 20210339.636 20209825 20210655 + gene protein_coding_gene TRUE TRUE AT5G49700.1 DNA-binding protein-related similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT1G14490.1); similar to DNA-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33958.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175) 0.999483979788458 7.99388166651302 8.38123707925e-06 0.000237042988152900 12.1144745016375 4.20230955041256 0.999483979788458 0.157163701422795 AT5G43430_at 5.8475284436006 6.6528135454949 6.98651516816281 7.38319628376485 7.09844345516956 6.88609673012849 6.81806306369466 6.96131693229433 6.12907191575175 6.56480483116652 7.89484875696118 8.26582660222289 7.49142656069586 8.02435649024591 7.74289797312006 8.13959900104602 7.66132705939331 7.83481905246206 6.41704635051852 0.186190358557601 0.178729810951133 0.180043370033203 0.182887917319058 0.178398959511353 0.185206097780099 0.174914264251716 0.176979697100222 0.183961161048373 0.183730827840746 0.174921601271209 0.179447382172069 0.177756355478993 0.174914264251716 0.175745639755005 0.174941808111024 0.182290450537516 0.190853690964985 0.181293779375624 5 5|0 +|/ 17471169 17472275 17471709.2 17470826 17472524 + gene protein_coding_gene TRUE TRUE AT5G43430.1|AT5G43430.2|AT5G43430.3 ETFBETA; electron carrier Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation. similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein, beta subunit; (InterPro:IPR012255); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049)|similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049)|similar to electron transfer flavoprotein beta subunit [Oceanicaulis alexandrii HTCC2633] (GB:ZP_00952715.1); similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049) 1.01510620045406 7.9849968974556 8.46736466106923e-06 0.000239322784155521 12.104673381539 13.9553443958708 1.01510620045406 0.161549360854308 AT5G18940_at 6.84537890306538 7.55510213856736 8.12409860412242 8.11575134346393 8.9129176885977 8.32819181511849 7.8039777272092 7.80168576068456 7.26356909293343 6.71095826929469 8.11132489494014 8.3963922633691 8.24558676044531 8.34741960361141 7.61548999379608 8.24761658203842 8.28133844649347 8.0273630302228 7.0826476547705 0.223766262385220 0.196022874834314 0.214015435125750 0.207689467822344 0.208109173257007 0.207766799329339 0.196078779520328 0.198695142622072 0.210564581171575 0.204420803975614 0.196305357905631 0.205586747622504 0.197866192411502 0.208523409081217 0.202289444712723 0.198414507906879 0.210841882175649 0.198826898839569 0.212447610804559 5 5|0 +|/ 6326947 6328072 6327511.556 6325788 6328356 + gene protein_coding_gene TRUE TRUE AT5G18940.1|AT5G18940.2 Mo25 family protein similar to Mo25 family protein [Arabidopsis thaliana] (TAIR:AT5G47540.1); similar to PREDICTED: similar to Calcium binding protein 39 (Mo25 protein) isoform 1 [Canis familiaris] (GB:XP_534599.2); similar to calcium binding protein 39 [Danio rerio] (GB:NP_998666.1); similar to Os07g0647100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060466.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989)|similar to Mo25 family protein [Arabidopsis thaliana] (TAIR:AT5G47540.1); similar to calcium binding protein 39 [Danio rerio] (GB:NP_998666.1); similar to Os07g0647100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060466.1); similar to Os03g0359700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050152.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 1.00435591915453 7.97271642702565 8.58798781027614e-06 0.00024257396213094 12.0911100113813 15.5249503905357 1.00435591915453 0.159143156547796 AT5G50160_at 9.57475572312663 9.4968785474083 10.3516107672149 10.2830054968930 10.8090588818765 9.92736204086593 9.31087726420816 8.8513110398289 8.6468688346618 7.87294188334121 9.37629457876983 9.30555821976399 9.43530491712419 9.46774769043019 9.443341781915 9.28563757329683 9.34344367262535 8.82890452877508 8.16890025069637 0.124983550364646 0.122508870000577 0.124657291336345 0.118361427824185 0.121646792590576 0.139275270100379 0.124243889842693 0.120567467354966 0.132469172279384 0.134927887676120 0.123472515690306 0.122642682410585 0.118361427824185 0.127194571461581 0.123969779372005 0.121395010987087 0.121457950017264 0.125496396756563 0.124793768311248 5 5 + 20435092 20435781 20435303.5 20432997 20435968 + gene protein_coding_gene TRUE TRUE AT5G50160.1 ATFRO8/FRO8 (FERRIC REDUCTION OXIDASE 8); ferric-chelate reductase/ oxidoreductase Encodes a ferric chelate reductase that is expressed in shoots and flowers. similar to FRO1 (FERRIC REDUCTION OXIDASE 1), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01590.1); similar to ATFRO3/FRO3 (FERRIC REDUCTION OXIDASE 3), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G23020.1); similar to ferric reductase [Cucumis sativus] (GB:AAT01415.1); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916) 1.05775622525369 7.9710263886926 8.60473278922853e-06 0.000242888702558378 12.0892419360303 18.5957821917965 1.05775622525369 0.172999448111471 AT5G04460_at 5.34884938777186 5.25640293627319 6.61933804727502 6.09336908732713 6.59692211528153 6.34827865572826 5.2237389753849 5.23142770341058 5.66560206170603 5.21238328974143 5.76189942408646 5.79397777113933 6.09335626662892 6.19247400298621 5.67897945626174 6.29727210755131 5.60573790288565 6.1453610304636 5.57323577348003 0.176970190079843 0.18235401034353 0.171507969712791 0.168714747194704 0.181021918459894 0.175312522936214 0.174056197612123 0.184849393051552 0.18814242208794 0.172890073236265 0.168714747194704 0.172895422784616 0.173107618434019 0.176075039594649 0.179865086213909 0.169315868030818 0.188454643793898 0.170027453732983 0.174003138298703 5 5 + 1262794 1263469 1263049.455 1260010 1263863 + gene protein_coding_gene TRUE TRUE AT5G04460.1 protein binding / zinc ion binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27950.1); similar to Os09g0570500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063987.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31049.1); similar to Os02g0823300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048568.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.805882047983713 7.9698954539057 8.61595784442229e-06 0.000243047322054012 12.0879916622703 11.5547271736697 0.805882047983713 0.101951433073665 AT5G46630_at 10.1978048395135 10.2650921067327 10.7852809929934 10.7646412846034 11.0080307610829 10.6611042502662 10.0131152112984 9.891180500619 10.1234428731387 9.85680983089367 10.7329725531777 10.8128728734644 10.6634527640263 10.5169934733608 10.5234741371487 10.6896947143381 10.5163876318777 10.6447301060885 9.83065724386845 0.0897512801953865 0.0828088257717978 0.088221602312144 0.084594014134949 0.0828088257717978 0.0863010288654222 0.0828088257717978 0.0864403501023766 0.099865202829379 0.0898127619418175 0.0828088257717978 0.0831081066037239 0.0840695868481493 0.087651301008055 0.0926400200246562 0.08294048512573 0.0870340251427644 0.0837926950628728 0.0864910160405973 5 5 + 18939389 18940409 18939855.364 18937665 18940777 + gene protein_coding_gene TRUE TRUE AT5G46630.1|AT5G46630.2 clathrin adaptor complexes medium subunit family protein clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT1G60780.1); similar to Os02g0690700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047793.1); similar to similar to Dictyostelium discoideum (Slime mold). Clathrin coat assembly protein AP50 (Clathrin coat associated protein AP50) (Plasma membrane adaptor AP-2 50 kDa protein) (HA2 50 kDa subunit) (Clathrin assembly protein complex 2 medium chain) (GB:AAO51241.1); contains InterPro domain Clathrin adaptor complex, medium chain; (InterPro:IPR001392); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) 0.706784228373608 7.9609924611426 8.70487871415424e-06 0.000245396029370654 12.0781435818566 20.7355523755481 0.706784228373608 0.0647926579214927 AT5G27540_at 8.07848781162572 8.44906813776894 8.9070148111175 9.10672965356985 9.0387663010754 8.92654741253818 8.37817455607808 8.19362388111793 7.21892863729903 7.60511643551628 7.68740288011698 8.18450633842534 8.1847096610775 8.0362492396054 8.34354880962791 8.27190781026183 8.65130936876372 8.2358664879949 7.44719477153427 0.143025175514139 0.151809722574960 0.154703162779043 0.149709492304664 0.148979501421729 0.152406347140791 0.145632755630067 0.152870852067011 0.177221030393402 0.152512422370626 0.153543017915801 0.145655683018593 0.144854863385508 0.149852274911216 0.156884518927442 0.145397557864876 0.147860871044681 0.139710465992476 0.155569262379254 5 5|0 +|/ 9726330 9727089 9726667.2 9722428 9727457 + gene protein_coding_gene TRUE TRUE AT5G27540.1|AT5G27540.2 EMB2473 (EMBRYO DEFECTIVE 2473); GTP binding / calcium ion binding similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G63150.1); similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G05310.1); similar to Os03g0810600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051665.1); similar to Os01g0843300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044775.1); similar to putative mitochondrial Rho 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD81741.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain EF hand associated, type-1; (InterPro:IPR013566); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain EF hand associated, type-2; (InterPro:IPR013567) 0.747808453814284 7.95832275760878 8.73173591488566e-06 0.000245993207255781 12.0751885332959 16.4463936652451 0.747808453814284 0.0818802480891043 AT5G49460_at 7.57620333862051 7.52540298270202 7.21690146582617 7.33602590684007 8.34978884444534 8.21244727208105 8.22954910858098 8.33327425561227 7.57727812725657 7.65889823250937 9.45040709912948 9.6719789685543 9.08799980891031 9.0830219723605 9.3447489518297 8.7839046697138 8.27542656749148 9.05878125559405 7.69361924430457 0.19152081553201 0.180494528879049 0.190580108125855 0.190878683236904 0.175541506199989 0.179684123493495 0.176927891868943 0.178246719119478 0.194511625598748 0.185419044828256 0.181175685730726 0.179118199028504 0.179126123557286 0.185081222836808 0.173799093122901 0.173799093122901 0.200103617697577 0.179003435688862 0.181592188658056 5 5 + 20074623 20075378 20075073 20071749 20075690 + gene protein_coding_gene TRUE TRUE AT5G49460.1 ACLB-2 (ATP-citrate lyase B-2) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL) similar to ACLB-1 (ATP-citrate lyase B-1) [Arabidopsis thaliana] (TAIR:AT3G06650.1); similar to ATP citrate lyase a-subunit [Lupinus albus] (GB:CAC86995.1); similar to ATP:citrate lyase [Capsicum annuum] (GB:AAK13318.1); similar to ATP citrate lyase [Cyanophora paradoxa] (GB:CAB46077.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) 0.656975955630165 7.95517285617962 8.76353908936217e-06 0.000246728858631119 12.0717008069900 16.2163485783659 0.656975955630165 0.0372742722128986 AT5G01220_at 8.08491606543287 8.15149918366328 8.3809668963365 8.39785017141295 8.57886594388682 8.28717777679119 8.17385593171352 8.06109999819899 7.67969749271008 7.76107619245423 8.86703172422265 8.84801717015795 8.84941693528208 8.94459216999412 8.80248682933773 9.53223220319768 8.71520532925495 8.58836026244277 7.99906440267239 0.142729070807909 0.137566972701034 0.149436358417181 0.147993414993519 0.137947173158641 0.142487778556880 0.141424738014334 0.141313227889600 0.152003438735151 0.150117091567794 0.137566972701034 0.139282509961432 0.153061674617951 0.143666190831313 0.146444015161497 0.138305260682336 0.145919796131313 0.146548198275165 0.141756753476262 5 5 - 86987 87740 87414.636 86584 89985 - gene protein_coding_gene TRUE TRUE AT5G01220.1 SQD2 (SULFOQUINOVOSYLDIACYLGLYCEROL 2); UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups involved in sulfolipid biosynthesis similar to SETH2, transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G45100.2); similar to sulfoquinovosyldiacylglycerol synthase type 2 [Vigna unguiculata] (GB:ABA55726.1); similar to Os07g0100300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058670.1); similar to Os01g0142300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041991.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.686755433864356 7.95353495761092 8.78012567310036e-06 0.000247035425035021 12.0698867506073 16.6178775912287 0.686755433864356 0.0554083751410169 AT5G47420_at 6.22798769338717 6.9424034244851 7.523118502138 7.87076552553587 7.55842404977578 6.73072356433659 5.23954536304555 5.11074090633097 4.58245519412837 5.12963517780794 5.56042922287278 6.12382787105494 5.51398021805257 5.95006240223128 6.03830030312285 5.88102817641966 5.21212133965182 5.83298508271807 5.2245628130884 0.275900047308657 0.268080514031695 0.268080514031695 0.272464748150219 0.268080514031695 0.281672380106275 0.268080514031695 0.272848637711424 0.293764174336903 0.282326088964501 0.279026313950327 0.268080514031695 0.268080514031695 0.283444360333033 0.27606473918122 0.269425392128235 0.293583359103556 0.278970323970822 0.27245321957337 5 5|0 +|/ 19250934 19251848 19251419.625 19250063 19252286 + gene protein_coding_gene TRUE TRUE AT5G47420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17420.1); similar to hypothetical protein 31.t00054 [Brassica oleracea] (GB:ABD65092.1); contains InterPro domain Protein of unknown function DUF124; (InterPro:IPR002838) 1.16289799782081 7.95204659458579 8.79522736543613e-06 0.000247299842376887 12.0682380191378 12.0219517396412 1.16289799782081 0.199795860471989 AT5G16110_at 9.19106823132696 9.45708426421613 9.72635457397177 10.0338330991594 10.7885614489791 10.7219508399691 8.74554160215518 9.05043296041554 9.33614814405412 8.78769215457976 9.46707755226267 9.16011551242081 9.83112759244151 9.56599055830886 8.85668405107427 9.38663435785886 9.48539501437829 9.3404570642767 9.06344067617935 0.134118749438732 0.130467130899205 0.144877221621165 0.139302014335153 0.136884205117671 0.145648856771869 0.138189412374260 0.134926238961914 0.140272357614786 0.138344599859106 0.127629141435170 0.131862772119058 0.129276812571825 0.131306305066277 0.139157220306657 0.133290854187142 0.137427736979444 0.133210509488449 0.133131108750679 5 5 - 5261244 5261902 5261515 5260607 5262843 - gene protein_coding_gene TRUE TRUE AT5G16110.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02555.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96917.1) 0.76545072363237 7.9505268634537 8.81067629632132e-06 0.00024757367414104 12.0665542514439 18.9389094797652 0.76545072363237 0.0886984562467296 AT5G19660_at 6.02580584806514 5.75801054683588 6.93500127148713 7.1079693081578 7.73544094175544 6.97215160102672 5.55666593371574 5.77192974297303 5.62103124607425 5.9456120002878 6.33538265475006 6.55276335184463 6.61512955629015 6.51881087474503 5.71625873711928 6.57239318997029 6.2071497641024 6.63038385393633 6.08650381267748 0.250446145810095 0.233504256321661 0.247890972115739 0.243029380704157 0.254513459099053 0.242184246471838 0.244958852348365 0.236436171763138 0.251461248449266 0.248174101700359 0.243984859887457 0.242193565016043 0.238725096192127 0.25355077578295 0.252239988974083 0.2436583683891 0.253997410613947 0.233504256321661 0.233504256321661 5 5 - 6642331 6642867 6642608.273 6642006 6646532 - gene protein_coding_gene TRUE TRUE AT5G19660.1 subtilase family protein similar to subtilase [Arabidopsis thaliana] (TAIR:AT1G20160.2); similar to LOC511682 protein [Bos taurus] (GB:AAI23413.1); similar to PREDICTED: similar to Membrane-bound transcription factor site-1 protease precursor (Site-1 protease) (Subtilisin/kexin-isozyme-1) (SKI-1) isoform 2 [Canis familiaris] (GB:XP_850300.1); similar to PREDICTED: similar to Membrane-bound transcription factor site-1 protease precursor (Site-1 protease) (Subtilisin/kexin-isozyme-1) (SKI-1) isoform 5 [Canis familiaris] (GB:XP_861262.1); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209) 0.959344703770462 7.94876896775035 8.82858288525014e-06 0.000247893003202739 12.0646062488165 12.6218300746811 0.959344703770462 0.147916836754331 AT5G27730_at 7.20964466183915 6.99727333278556 7.90133186065289 7.51745181422475 8.32479941313686 8.14011060002722 7.40625074117265 7.03187588291723 6.88791758434451 6.85620267535483 7.73415583794955 7.8067626161365 7.62349686975899 8.0851815739557 7.34161008236483 8.0928891145438 7.86798265089837 7.68329942286788 7.14874444379077 0.172885777803042 0.171030151523955 0.169326258113823 0.172770031828716 0.174839627660562 0.172945171989829 0.168052038786934 0.165975771984136 0.184902097515925 0.166401738457114 0.169936741315558 0.169021302065265 0.171409881069353 0.172254072965202 0.186928878389115 0.174828532019193 0.185968243424968 0.168303596250466 0.167756326629554 5 5|0 +|/ 9821842 9822794 9822335.111 9820253 9823090 + gene protein_coding_gene TRUE TRUE AT5G27730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47900.1); similar to Os01g0931100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045294.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92860.1) 0.812398151947265 7.94828932520735 8.83347553019671e-06 0.000247893003202739 12.0640746678269 14.9379475411226 0.812398151947265 0.104799133039508 AT5G58470_at 5.95294755820379 5.8336046958462 6.80065922109001 6.36729306507056 6.70066932105169 6.01367451968842 5.57813399806934 5.71936323242205 5.61869714086632 5.54113113447221 6.42683296081124 6.53265341373538 6.81764293800536 6.58508688395471 6.7548918584508 6.93560524662394 6.3661445973934 6.49509934422663 5.11004386426734 0.210670724907576 0.210670724907576 0.231814330817841 0.224010980057622 0.210670724907576 0.214939408313036 0.210670724907576 0.221338165519387 0.216658007770747 0.231127195660623 0.210670724907576 0.214694297771062 0.218610689824919 0.217962911310902 0.224167683073439 0.211132612167502 0.212444106058266 0.223425216516098 0.228624910622018 5 5|0 -|/ 23656646 23657229 23657013.333 23654933 23658146 - gene protein_coding_gene TRUE TRUE AT5G58470.1|AT5G58470.2 zinc finger (Ran-binding) family protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G46730.1); similar to Os01g0164400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042101.1); similar to PREDICTED: similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted) isoform 1 [Danio rerio] (GB:XP_684222.1); similar to PREDICTED: similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted) isoform 3 [Danio rerio] (GB:XP_707398.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.945257801394026 7.94596319423703 8.85724506717668e-06 0.000248399269284821 12.0614962382864 12.1395608857313 0.945257801394026 0.144161546065011 AT5G03630_at 9.17342083326269 9.45660314807315 10.0952474053699 10.0581720543699 10.0899910045214 9.23957663740611 8.5286174774856 8.2960365257548 7.34893752711322 8.2333686211519 8.96138488610327 9.4370272477258 8.83326138997275 8.72342080496558 8.85798149843665 9.02510551747032 8.40487334293536 8.91831356086227 8.09190986981946 0.177667685647545 0.171441364309145 0.170934123235673 0.176172770384316 0.170721426954806 0.178934588010533 0.171899079219521 0.179281067684097 0.199315273807005 0.177940957584838 0.171583895698073 0.170721426954806 0.170721426954806 0.174377212814956 0.180065127819248 0.170721426954806 0.195067976582626 0.189326651714647 0.178209663591317 5 5 - 922388 923057 922726.818 922165 924677 - gene protein_coding_gene TRUE TRUE AT5G03630.1 monodehydroascorbate reductase, putative Identical to Probable monodehydroascorbate reductase, cytoplasmic isoform 4 (EC 1.6.5.4) (MDAR 4) [Arabidopsis Thaliana] (GB:Q93WJ8;GB:Q8LBB1;GB:Q9LZS5); similar to ATMDAR1 (MONODEHYDROASCORBATE REDUCTASE 1), monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] (TAIR:AT3G52880.1); similar to MDHAR (MONODEHYDROASCORBATE REDUCTASE), monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] (TAIR:AT3G09940.1); similar to Monodehydroascorbate reductase (MDAR) (Ascorbate free radical reductase) (AFR reductase) (GB:Q43497); similar to monodehydroascorbate reductase [Mesembryanthemum crystallinum] (GB:CAC82727.1); similar to Monodehydroascorbate reductase, seedling isozyme (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) (GB:Q42711); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 1.00542148548513 7.94391773172478 8.87820370198882e-06 0.000248826100747853 12.0592283550199 17.7604963209907 1.00542148548513 0.160378385175846 AT5G15470_at 3.94730785812580 4.75774648340896 5.19893925361176 5.4213221433274 5.40352594396296 5.32226391584279 5.3808805250918 5.41254926113533 4.68497133677347 4.822272041196 6.40271203738396 6.60925466076686 5.80115296901788 6.33969687521376 5.67245958227869 5.84314267891471 5.88101228735192 6.2596549818109 4.46988731328625 0.244267882198812 0.234619845084427 0.240818453038122 0.238249596604994 0.227633150908426 0.234931493005974 0.230721504534736 0.245842190756923 0.233233472808655 0.226271787086556 0.225932296176099 0.22534075376939 0.227725263745813 0.241235872377366 0.241089936748485 0.222835903010994 0.232612934107727 0.230281943317808 0.230744644386983 5 0|5 /|- 5021485 5022045 5021705.5 5021013 5024745 - gene protein_coding_gene TRUE TRUE AT5G15470.1 GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to Os12g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067123.1); similar to Os03g0211800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049351.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94604.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 0.951991988793091 7.93957423963001 8.92288678444431e-06 0.000249563037360649 12.0544108058813 10.4856565844855 0.951991988793091 0.146215455518098 AT5G65650_at 5.89757956697963 6.13872335792477 6.517334286117 6.43926580281652 7.15730231651331 6.56967724093448 5.89279980730122 6.02733106196522 5.65009148269248 4.81421243410955 6.08511213730196 6.46034802760245 6.05756991788697 6.18252785207298 6.51204140394703 6.02758255868056 5.95344920893342 6.25845051167117 5.13031922193647 0.170790909451973 0.180451832821532 0.198324790837751 0.179524787574334 0.179912121717609 0.184283513123424 0.182872338875605 0.175532990344728 0.183543671959354 0.174526800043213 0.170069054792412 0.171482896962246 0.172789474548211 0.180533190091388 0.177208433041426 0.173176478780983 0.171103989975663 0.172018325272235 0.177372970121399 5 5 + 26256832 26257326 26257094.636 26256728 26258741 + gene protein_coding_gene TRUE TRUE AT5G65650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36660.1); similar to BAC19.4 [Lycopersicon esculentum] (GB:AAG01119.1); contains InterPro domain Protein of unknown function DUF1195; (InterPro:IPR010608) 0.837856976200927 7.93949872891614 8.92366573603827e-06 0.000249563037360649 12.0543270327143 12.0251731376565 0.837856976200927 0.113168608021642 AT5G14960_at 2.10699988707237 2.37522235982846 2.76996074785826 2.62344766120653 3.9643736565917 3.41448421105328 1.97211651304229 1.49760246485416 1.18549254199235 1.122593121778 1.69905931289563 1.55094932592603 1.73138799643680 2.01950043225268 1.66486391633395 1.35023664947532 2.28388686898321 1.47133277403733 0.972614878106453 0.20550161459778 0.21369488493077 0.202721025539895 0.205241539574894 0.212719299884039 0.212232093569901 0.203552146389797 0.205715276507475 0.213391588155037 0.211501799100699 0.202674143559520 0.203753664434027 0.211928071222381 0.207530374666528 0.204124132945285 0.210505512700132 0.216378494697745 0.205594224719896 0.205793019077132 5 5|0 +|/ 4845659 4846304 4846009.889 4843951 4846397 + gene protein_coding_gene TRUE TRUE AT5G14960.1 DEL2/E2FD/E2L1 (DP-E2F-LIKE 2); DNA binding / transcription factor similar to DEL3 (DP-E2F-like 3), transcription factor [Arabidopsis thaliana] (TAIR:AT3G01330.1); similar to Transcription factor E2F/dimerisation partner (TDP) [Medicago truncatula] (GB:ABE82375.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.916458287614238 7.93920400959855 8.92670669746905e-06 0.000249563037360649 12.0540000580415 3.99801044110582 0.916458287614238 0.136367883660200 AT5G25360_at 9.08336375713706 8.94641917304996 9.78359080916572 9.66825174100792 10.3137923993042 9.63419229432866 9.62379330655799 9.04054297297226 8.2708330581523 8.56864984149555 9.7785405235284 9.74216912272564 9.77750440373915 9.67247894103926 9.69916264366505 9.83656764853146 9.8308764571804 9.50412610597284 8.40450496393413 0.132837343548153 0.12254977725519 0.123905133267097 0.121639166217503 0.121850837251719 0.122510879766344 0.121701827040088 0.125956842696963 0.161416770739201 0.126888012766899 0.122114694872154 0.121679211005956 0.120566879610062 0.125358739389971 0.124310759580265 0.122059847058113 0.127402567103835 0.141016746199216 0.123438791474092 5 5|0 -|/ 8800083 8802312 8801594.667 8799713 8802649 - gene protein_coding_gene TRUE TRUE AT5G25360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15350.1); similar to hypothetical protein [Glycine max] (GB:AAN03467.1) 0.995971309063046 7.93905456309928 8.92824913832536e-06 0.000249563037360649 12.0538342512796 18.5841637326864 0.995971309063046 0.158048672303974 AT5G46920_at 5.85726446194626 5.92938991421889 6.79812385813032 6.97209554131736 6.53127280002536 6.58648636796518 6.02199546728205 5.90439809587819 5.12195022383262 5.17007505822695 5.35118525673235 5.46329140349089 6.05738891063234 5.48022998421871 5.76305084378129 6.48825586229737 6.18965046319516 6.08612391892534 5.71584817925722 0.231514528269666 0.229712515527587 0.232081137654433 0.232738589365548 0.230586534798428 0.2388070574881 0.228140798478800 0.234780639717447 0.232038744348770 0.239819746402904 0.231405127973652 0.230342016508286 0.237846217848158 0.233943253968256 0.226071705768327 0.226071705768327 0.235171989022801 0.226071705768327 0.240176408114609 5 5 + 19072556 19073014 19072753.636 19070855 19073234 + gene protein_coding_gene TRUE TRUE AT5G46920.1 intron maturase, type II family protein similar to intron maturase, type II family protein [Arabidopsis thaliana] (TAIR:AT1G30010.1); similar to intron maturase, type II family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97559.1); similar to Os10g0567500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065434.1); contains InterPro domain RNA-directed DNA polymerase (Reverse transcriptase); (InterPro:IPR000477); contains InterPro domain Intron maturase, type II; (InterPro:IPR000442) 0.658835958499232 7.93856753630738 8.933277751889e-06 0.000249563037360649 12.0532938889323 11.9230557637695 0.658835958499232 0.0395935710504833 AT5G56170_at 8.1657302748517 8.29727115405183 8.97162848077448 8.94385968182 9.25935385948159 8.73385647315024 8.51137607993836 8.47689290117393 8.70975704041074 8.31878054089607 9.90522271025013 9.53158044233784 9.41553926805825 9.54957189633195 9.632133240526 9.26468294526334 8.96309929936118 9.34136648328035 8.49136835742445 0.107337449292797 0.108455847218547 0.113007731996135 0.106367370593809 0.107782693193618 0.118765669203053 0.109341439771022 0.107916414666640 0.115681789669806 0.111589517949362 0.106561885578816 0.110285160321174 0.108691276327995 0.111796828651364 0.106958281619397 0.110324170058389 0.116260111566521 0.110870775722666 0.110150621053675 5 5 + 22753298 22754227 22753983 22753141 22754531 + gene protein_coding_gene TRUE TRUE AT5G56170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20700.1); similar to GPI-anchored protein [Vigna radiata] (GB:BAA34247.1) 0.779060622034168 7.93494349601427 8.9707926672035e-06 0.000250449694365853 12.0492720295446 17.6485135374485 0.779060622034168 0.0940581473270508 AT5G59140_at 9.64221386227236 9.52683890751498 10.2857501099605 10.2785679203665 10.5234765876771 10.1512699146861 9.26315655926082 9.20164210562892 9.23539492732514 8.42367244027484 9.22960708661769 9.24604682949336 9.231951588139 9.40975489188988 9.08863112093551 9.4573952832367 8.96444695845354 9.35089771998723 8.51544906515845 0.0968431402050822 0.0946280461041738 0.0971232957247255 0.0957072420725278 0.0953387690768098 0.0971098708166999 0.0996530780617986 0.0954484204447458 0.0962360694870167 0.100101163179191 0.0978622711857412 0.094537944325677 0.100195402836783 0.0943760664966525 0.0996661515030938 0.0950768294200425 0.104714927485345 0.0963946505211208 0.107137725942739 5 5|0 -|/ 23891933 23892804 23892472.889 23891637 23892921 - gene protein_coding_gene TRUE TRUE AT5G59140.1 SKP1 family protein similar to Os11g0707700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068558.1); similar to elongation factor SIII p15 subunit, putative [Aedes aegypti] (GB:EAT43917.1); similar to Hypothetical protein CBG11707 [Caenorhabditis briggsae] (GB:CAE66436.1); contains InterPro domain SKP1 component; (InterPro:IPR001232) 0.711902949213949 7.93082022437792 9.01368257209425e-06 0.000251485174497324 12.0446941185003 18.8452046188027 0.711902949213949 0.0682820283853321 AT5G41210_at 9.91363849301659 9.96832819624028 10.5937836475081 10.6110216697935 10.7902713661089 10.3239217892132 10.184955346307 9.80956111056894 8.73736537600657 9.73223257824188 10.3003377029347 10.2368846555050 10.2055979611218 10.2385619131891 10.3729544398264 10.3135911432235 10.2377085072176 10.1607291565208 9.2896717149521 0.103973872342513 0.102722075005492 0.103616085549607 0.103154519747844 0.103714142857964 0.107450880103102 0.102913401961577 0.105087514018588 0.140497245270250 0.105749199246946 0.10817811798386 0.102923613579444 0.104270082943068 0.108796211005469 0.104446721175339 0.105249957107869 0.112219964881152 0.111179280942310 0.113032158267325 5 5|0 -|/ 16509780 16510652 16510134.25 16509548 16511222 - gene protein_coding_gene TRUE TRUE AT5G41210.1 ATGSTT1 (Arabidopsis thaliana Glutathione S-transferase (class theta) 1); glutathione transferase Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTT2 (Arabidopsis thaliana Glutathione S-transferase (class theta) 2), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41240.1); similar to ATGSTT3 (Arabidopsis thaliana Glutathione S-transferase (class theta) 3), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41220.1); similar to glutathione S-transferase GST 23 [Glycine max] (GB:AAG34813.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.807917313415795 7.92613028315747 9.06273639430714e-06 0.000252691187865648 12.0394844426619 20.0301279896825 0.807917313415795 0.104076357200397 AT5G44150_at 4.67297786065808 4.77819843471008 5.93677655797928 5.37044825701135 6.14307876607718 5.60104842284657 4.78198829180498 4.3489632590852 4.00824328492085 3.98549765379784 5.0006570620162 5.18101403569677 4.88179838221954 5.11853085985371 5.03588100510354 5.11273856155399 4.73735900199921 4.44936033998492 4.25789217642333 0.223561089338747 0.223874844891679 0.235876456239496 0.224479475900843 0.228411666092197 0.237263161900335 0.228185362442134 0.230905141676964 0.226111528359482 0.233804618894416 0.222917690701699 0.222917690701699 0.222917690701699 0.228169899137484 0.228942587651082 0.222917690701699 0.242403825553276 0.239922585124604 0.230518036580526 5 5 - 17781068 17781612 17781351.3 17780910 17782647 - gene protein_coding_gene TRUE TRUE AT5G44150.1 similar to Os05g0564000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056329.1) 0.986547870210078 7.92398311375752 9.0852906074244e-06 0.000253157252228641 12.0370983975394 9.715957536822 0.986547870210078 0.156047592939553 AT5G64360_at 5.19060317143425 5.48190237901329 6.62484251010042 5.95061833267151 6.35906095558217 5.81211001935879 4.61239801731056 4.71552702275688 4.81706487223958 4.60469021904954 5.5352405756604 5.51511938322385 5.53104814984642 5.93300083012214 5.51777723877396 5.58137005904915 5.83038584112429 5.62643480599528 5.04310332187113 0.204473204504612 0.201845112447329 0.208455328926086 0.212144361041649 0.215506297975187 0.213792976628153 0.207540275348831 0.218322651472413 0.21863021422646 0.205578390445921 0.205766279094317 0.201845112447329 0.204771484852410 0.210234835891687 0.204818662458917 0.217221492992134 0.208330201554346 0.209135508604787 0.201845112447329 5 5 - 25754459 25754994 25754716.636 25753566 25755893 - gene protein_coding_gene TRUE TRUE AT5G64360.1|AT5G64360.2|AT5G64360.3|AT5G64360.4 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09540.1); similar to Heat shock protein DnaJ, N-terminal [Medicago truncatula] (GB:ABE93084.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.999363973110246 7.92309664163552 9.09461993254239e-06 0.000253254449456155 12.0361131339531 10.8210910917924 0.999363973110246 0.159475707266316 AT5G08590_at 10.1072047670949 10.0340683334696 10.6937428347454 10.7060878989119 10.9343335348043 10.7101800856762 10.2752938195913 10.1552543576900 9.91817371775614 9.95235515140515 10.6020391115978 10.5768659817527 10.7450758813899 10.7649344569387 10.4891545162231 10.7236122376658 10.5890247479206 10.6168451227432 9.8980280003413 0.0890282393212344 0.0888134772753215 0.0901187442061904 0.0880764182669379 0.0869580180987232 0.0972442139066845 0.086621054984797 0.0888199903170378 0.0970250750960281 0.090251527364045 0.0859673410034216 0.0870232957394911 0.0871803985845565 0.0906221391641936 0.0864013249558425 0.0879076953355058 0.0872835757923023 0.087774200518778 0.0907366413290647 5 5|0 +|/ 2784779 2785723 2785407 2783334 2786095 + gene protein_coding_gene TRUE TRUE AT5G08590.1 ASK2 (ARABIDOPSIS SERINE/THREONINE KINASE 2); kinase Encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily. Identical to Serine/threonine-protein kinase ASK2 (EC 2.7.11.1) (ASK2) [Arabidopsis Thaliana] (GB:P43292;GB:Q9FNM9); similar to SNRK2-5/SNRK2.5/SRK2H (SNF1-RELATED PROTEIN KINASE 2-5, SNF1-RELATED PROTEIN KINASE 2.5), kinase [Arabidopsis thaliana] (TAIR:AT5G63650.1); similar to serine/threonine-protein kinase [Fagus sylvatica] (GB:CAE54075.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.666861243133882 7.92017346500586 9.12545715410365e-06 0.000253950059770865 12.0328634838197 20.7326688524295 0.666861243133882 0.0458368133122863 AT5G65180_at 5.19687907148991 5.32147715870633 5.87761825514917 5.83620699754055 6.37810921107648 6.25302802116822 5.39142543803185 5.35375334875032 5.10467498414245 5.10264924715499 5.68632049582833 5.51768108452658 5.78897421483823 5.48384090383654 6.07549897264674 5.57168053562891 5.96294111810126 5.58679750517082 5.34718959258103 0.189194455804974 0.190763486930885 0.201552636612616 0.190140643017674 0.195524468129152 0.1969377248571 0.188952437397961 0.19784404816319 0.192010227934184 0.195316357481421 0.193709906985811 0.19337095845232 0.196670696027313 0.196756001986472 0.188498298675990 0.191877121658284 0.192228131630116 0.193819032027184 0.193162583991284 5 5 + 26064246 26065002 26064749.364 26062587 26065257 + gene protein_coding_gene TRUE TRUE AT5G65180.1|AT5G65180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to 4D11_9 [Brassica rapa subsp. pekinensis] (GB:AAZ67523.1); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072); contains InterPro domain Protein of unknown function DUF618; (InterPro:IPR006903)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to 4D11_9 [Brassica rapa subsp. pekinensis] (GB:AAZ67523.1); contains InterPro domain t-snare; (InterPro:IPR010989) 0.64736788975918 7.9186873839694 9.14117743768016e-06 0.000254224362070601 12.0312110158016 11.1480895852966 0.64736788975918 0.0320520718383351 AT5G02940_at 8.95162680823661 9.05943316653792 9.8603925606099 9.66866260761141 10.2128325803751 9.58639759384005 9.6818993641094 9.21319997989542 8.22404218278155 9.31665042741392 10.1506452737106 10.1278170736251 10.0847730440290 10.2549211339747 10.1750953714726 10.4563451337543 10.0824232525704 10.0585066510892 9.22282059093604 0.112374342108586 0.102962144785275 0.107398074543866 0.104361879636208 0.106835231884987 0.107659294644247 0.112956340783255 0.111630502983650 0.139224149300711 0.107301033091611 0.105124987627588 0.107623030358238 0.106322207962571 0.102208730573169 0.110147161894930 0.104926760675845 0.111769387621437 0.107292611817335 0.112150201715306 5 5|0 -|/ 684730 685700 685334.5 684472 689696 - gene protein_coding_gene TRUE TRUE AT5G02940.1 similar to phosphotransferase-related [Arabidopsis thaliana] (TAIR:AT5G43745.1); similar to Os03g0163100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049055.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN06856.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) 0.929088152824347 7.91676266499426 9.16158128451629e-06 0.000254628483309076 12.0290703827024 19.076799049563 0.929088152824347 0.140641653135935 AT5G18850_at 7.2372936679363 7.58811783962497 7.91816991808384 8.19477183371513 8.74937338122822 8.38245791185886 7.70065225219498 8.05036018879623 7.22526433540527 7.27653864268148 8.3908773978311 8.09155598176384 8.70581908569782 8.64671324621804 7.9225960217558 8.7375326143595 8.1707217491064 8.24078562229647 7.50416573164705 0.171231446068629 0.162533409142576 0.173549636597373 0.170598249575537 0.169685729487347 0.173790504900776 0.167808500067083 0.170193272657244 0.176684866901089 0.162533409142576 0.168327195154336 0.168599775911741 0.164498504582336 0.175081386249318 0.171623246355729 0.164928859524733 0.176884045784022 0.167640108713498 0.165241581161853 5 5 + 6286906 6287222 6287058.364 6286849 6287592 + gene protein_coding_gene TRUE TRUE AT5G18850.1 unknown protein 0.847544792858706 7.91600725009827 9.16960283892592e-06 0.000254688165299565 12.0282300974846 15.8269736832414 0.847544792858706 0.116925139091466 AT5G02670_at 2.52270253457168 2.57672529650141 2.97904867205398 3.02188039139983 3.68141783272388 3.00755039044716 2.61615816199935 2.56782085903554 2.42681746345130 2.36739866194479 3.54364335276425 4.09929041580989 3.61961962207197 3.93914324955818 3.4754729749393 3.93644454085259 3.02984576597418 3.38954980526074 2.80180550193530 0.241554500364546 0.23431846568367 0.240519032620283 0.235811405075293 0.230883576984319 0.244210508945664 0.230735257431886 0.236412068858648 0.238305628354684 0.230416492198547 0.238016900418277 0.247111740774995 0.230416492198547 0.248063146785105 0.236895230055936 0.244433057673539 0.248539276213422 0.230416492198547 0.232823663277531 5 5|0 -|/ 603545 603930 603815.444 602720 604604 - gene protein_coding_gene TRUE TRUE AT5G02670.1 similar to polynucleotide adenylyltransferase [Arabidopsis thaliana] (TAIR:AT3G06560.1); contains domain POLY(A) POLYMERASE (PTHR10682); contains domain gb def: Hypothetical protein T22P11_260 (PTHR10682:SF1) 0.84937080771132 7.9147994456627 9.18244396824658e-06 0.000254881550150656 12.0268864469031 5.95222972984878 0.84937080771132 0.117522700106467 AT5G16260_at 6.77093372654418 6.95772068455099 7.6582809744294 7.68316251759118 8.33850917979067 7.94931195730223 6.84979153440777 6.96224449390938 5.79020312769473 5.74686828736714 5.90282738004408 6.21940845257224 6.73932922459985 6.51941754157404 6.09133637289519 6.71340512396791 6.5873342229603 6.10126261222216 6.21644099713062 0.218342993875729 0.224874411208476 0.227250110523527 0.226227910634378 0.221430947190905 0.234004008942870 0.221808624277906 0.223653897729945 0.234171815243401 0.225648263596673 0.226124274490196 0.218501715653901 0.219911995875263 0.218342993875729 0.219440710787375 0.221463878821173 0.228487671850196 0.224901181048284 0.226094575374521 5 5|0 +|/ 5313782 5315454 5314725.667 5311210 5315770 + gene protein_coding_gene TRUE TRUE AT5G16260.1 RNA recognition motif (RRM)-containing protein similar to H0306B06.5 [Oryza sativa (indica cultivar-group)] (GB:CAH67490.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.731798096524467 7.91185985328822 9.21377836264327e-06 0.000255498471923330 12.0236154555737 13.5348081771084 0.731798096524467 0.0773205071489637 AT5G63135_at 4.40517302755928 4.16373159226966 5.19799284460037 5.23539057650027 5.68340657212255 4.76087773023237 4.7231246446469 4.75171376994126 3.14801082977772 3.85655357388140 4.97718854241654 4.37757904222361 5.07208745894629 5.56629000768117 5.10281727162642 4.7840581504956 4.60277552371235 4.72926857797724 3.70693958003973 0.21983571438711 0.211751837696029 0.218336264118962 0.208298513264861 0.207981284905066 0.214095574848144 0.210449271589588 0.210090103460980 0.239516794960232 0.215490075704075 0.213854699832561 0.209920727447077 0.208809448644484 0.207572682334835 0.212504899604607 0.21148204923565 0.215968377238298 0.21844389812296 0.210019828754529 5 5 - 25342567 25343640 25343315.182 25342205 25343705 - gene protein_coding_gene TRUE TRUE AT5G63135.1 similar to Os02g0593400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047300.1) 1.01974395812245 7.9110850718593 9.22205631643172e-06 0.000255498471923330 12.0227531457575 9.10118104462634 1.01974395812245 0.165225915661303 AT5G51390_at 3.56100207508498 3.35158661728751 3.45118610062178 3.39000106511793 4.64536681547335 5.06896816778678 2.62965573292928 2.37517551339136 2.95001221344083 2.82323234200142 3.1197113241195 3.13650828740724 3.48036675508153 3.67421862771772 2.97327997704370 3.35524776024953 3.89484846156497 3.00163200546666 3.04337008835641 0.225973878419062 0.228142781067087 0.231319013268254 0.223776965826774 0.23278163166322 0.247883445024163 0.228639019977028 0.223293103419971 0.234156395712682 0.229384216264523 0.227350928278644 0.225324055231451 0.225970183927517 0.229639486256780 0.22323721876851 0.22323721876851 0.226092680271221 0.228527235924684 0.229461922918157 5 5 - 20895305 20895605 20895477.909 20895193 20895690 - gene protein_coding_gene TRUE TRUE AT5G51390.1 unknown protein 0.775065327237571 7.91105778418247 9.22234801105577e-06 0.000255498471923330 12.0227227739580 6.69329185984374 0.775065327237571 0.0934810363880627 AT5G57370_at 5.25452050967094 5.07766305854925 6.19768084879933 6.02298902418497 5.43235998287664 5.66602364284085 4.22332971974761 4.94319428139663 4.29116507863228 4.02118917593032 5.04328745126784 5.03752299452862 5.11158032097645 4.83803814456172 5.19245727511312 4.91452942549874 4.85411988923967 4.80033431543573 3.96433859702254 0.199129760223924 0.201965783403628 0.199659599681511 0.203163274451305 0.204847485095248 0.200241431130684 0.203188534200534 0.198818115705950 0.210436735726373 0.202089625581268 0.200886873031668 0.199446919258502 0.204034816347137 0.207405446807504 0.198905890475457 0.208957429358568 0.199679178652099 0.202081531816934 0.213393135781595 5 5 + 23262105 23262672 23262348.909 23261960 23263646 + gene protein_coding_gene TRUE TRUE AT5G57370.1 similar to U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] (TAIR:AT1G60900.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84015.1) 0.918419629441848 7.91046240390417 9.22871487585943e-06 0.000255511595106255 12.0220600787909 9.88532747231134 0.918419629441848 0.137858378362781 AT5G49970_at 9.53214226488313 9.67013030542762 10.5108602353271 10.4377801294683 10.5673970795291 10.2885240848561 10.1118807016937 10.2664652873233 9.45016738411804 9.9993028200084 10.8046472950256 10.6550806807273 10.6763235796123 10.61567371615 10.4973271976906 10.8218923349377 10.5271206157871 10.5429606051435 9.97784676983788 0.0988537639839398 0.0912459318313768 0.0912175612875942 0.0898823924565037 0.0916215650025758 0.0934265396561954 0.0932609805221257 0.0926406313458625 0.103559055168694 0.0959060348772667 0.0916205813426987 0.0905799121096987 0.0933153575953127 0.0936431951429042 0.0913247174568765 0.0910477377942444 0.0953480750671623 0.0991566302225356 0.0948518524733112 5 0|5 /|+ 20348516 20350079 20349512.571 20346413 20350381 + gene protein_coding_gene TRUE TRUE AT5G49970.1|AT5G49970.2 pyridoxamine 5'-phosphate oxidase-related encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group) similar to Putative pyridoxamine 5-phosphate oxidase [Oryza sativa] (GB:AAM08545.1); similar to Os10g0377800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064477.1); contains InterPro domain YjeF-related protein, N-terminal; (InterPro:IPR004443); contains InterPro domain Pyridoxamine 5' (InterPro:IPR000659); contains InterPro domain Pyridoxamine 5' (InterPro:IPR011576); contains InterPro domain FMN-binding split barrel; (InterPro:IPR009002); contains InterPro domain Pyridoxamine 5-phosphate oxidase, FMN-binding; (InterPro:IPR012349)|similar to Putative pyridoxamine 5-phosphate oxidase [Oryza sativa] (GB:AAM08545.1); similar to Os10g0377800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064477.1); contains InterPro domain YjeF-related protein, N-terminal; (InterPro:IPR004443); contains InterPro domain Pyridoxamine 5' (InterPro:IPR000659); contains InterPro domain Pyridoxamine 5' (InterPro:IPR011576); contains InterPro domain FMN-binding split barrel; (InterPro:IPR009002) 0.69475416880471 7.9061419737428 9.27505909419387e-06 0.000256630831579106 12.0172498258539 20.3990144666247 0.69475416880471 0.0614399973741031 AT5G03455_at 9.40959617436568 9.3474953320965 10.2004254505254 10.0555872798236 10.4109844695717 9.95162040193497 8.80454359900858 8.8491511140789 9.13750624212242 9.14501381261202 9.78669327228332 9.4736049342747 9.46791257319537 9.73848571423907 9.34652212948337 9.45467793676026 9.34411606203607 9.57078963624024 8.94539043306778 0.113289650656604 0.112303621110033 0.115834103343342 0.115326804648112 0.116843109068301 0.116351640315886 0.113622993146038 0.113785018758624 0.115400171664798 0.115972623479045 0.111274631206578 0.107799574897805 0.112929813726177 0.112609275843547 0.110700426930494 0.111913213040191 0.119548046179191 0.115084247447902 0.117275708250538 5 5|0 +|/ 862596 863921 863407.5 862558 864107 + gene protein_coding_gene TRUE TRUE AT5G03455.1 CDC25 Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance. Identical to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25) (CDC25) [Arabidopsis Thaliana] (GB:Q8GY31;GB:Q8LC90;GB:Q9LZE1); similar to Os03g0108000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048698.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN62781.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) 0.749418982644917 7.90496651017028 9.28771147206177e-06 0.000256817018274417 12.0159406861235 18.9280857001331 0.749418982644917 0.0843967187232731 AT5G23430_at 4.02164423307539 4.66698301150203 4.50986016151659 4.64585229966418 5.72655266116325 5.44600640243608 4.35205135585139 4.00403151312004 4.71163543760325 4.52526083250963 6.067997387120 6.16846686261915 5.76749208070027 6.18327209745955 5.54346542751972 5.69895487963697 5.16552408113336 6.43245447683049 5.3557153747658 0.224451010925219 0.216936369741405 0.220949467304517 0.220171067405989 0.226002155180486 0.220531420937901 0.23003576943904 0.222585246340334 0.215984245422344 0.228214966619385 0.222062548605500 0.218742705988984 0.216001839002589 0.225561574155926 0.218799007924557 0.22446359206987 0.232436306085990 0.218515318791901 0.223222537335824 5 0|5 /|- 7893994 7894730 7894280.143 7893674 7900390 - gene protein_coding_gene TRUE TRUE AT5G23430.1|AT5G23430.2 transducin family protein / WD-40 repeat family protein Identical to Katanin p80 WD40-containing subunit B1 homolog 1 [Arabidopsis Thaliana] (GB:Q8H0T9;GB:Q9FHL5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08390.1); similar to H0801D08.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86243.1); similar to H0402C08.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86235.1); similar to OSJNBa0064G10.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE05767.2); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.917569941404515 7.90254483805234 9.31383652084089e-06 0.000257375266664425 12.0132430639254 10.0429513514180 0.917569941404515 0.137877985860278 AT5G62000_at 9.86049495124806 9.79609570090762 10.4807124921231 10.5415246815860 11.1354395275935 10.6858968779938 10.4386940477583 10.1215343414762 8.76959558888666 9.02656475359043 9.66424449535117 9.78703549370169 10.3235479518017 9.7477493176706 9.6337917587419 9.9740290767834 10.1374405740011 9.8373431061344 9.14500528156164 0.104487930817092 0.103589718688495 0.105744656471666 0.106248350425703 0.109113941023747 0.106350555445328 0.107527800586150 0.105852058605971 0.116033509464549 0.120404892180317 0.105714803288178 0.105312155719983 0.105496458549334 0.106034765787435 0.105996884167824 0.103741447865659 0.105291750622185 0.104409604611579 0.112800586357018 5 5|0 +|/ 24929010 24931882 24930766.667 24927584 24932440 + gene protein_coding_gene TRUE TRUE AT5G62000.1|AT5G62000.2|AT5G62000.3 ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor|ARF2 (AUXIN RESPONSE FACTOR 2) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. Identical to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP) (ARF2) [Arabidopsis Thaliana] (GB:Q94JM3;GB:O23671;GB:Q9C5W5;GB:Q9FIT6); similar to ARF1 (AUXIN RESPONSE FACTOR 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G59750.3); similar to auxin response factor-like protein [Man (GB:AAP06759.1); similar to putative auxin response factor [Brassica napus] (GB:CAG30068.1); similar to auxin response factor 2 [Lycopersicon esculentum] (GB:ABC69711.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.782223907451774 7.89737839224143 9.36983796911147e-06 0.000258757871918472 12.0074854130855 19.8168172091456 0.782223907451774 0.0964341984433329 AT5G44720_at 10.1228167715993 10.3206239175110 10.3347250685313 10.4844069203017 10.9038075425525 10.0987334136022 10.2466956141825 10.0228161075952 8.28889722527862 9.6163232672587 10.7596901515993 10.8649832614920 10.7060392645359 10.7800264901043 10.4214516044049 10.5921103644864 10.4869599630633 10.9280865908140 9.22413778105017 0.120555971201173 0.116269563050251 0.122821461686262 0.116269563050251 0.118509312814053 0.119736696155657 0.119177500827894 0.117246586007838 0.138306611593464 0.120710381572348 0.124731104415892 0.117590712772209 0.116269563050251 0.125443848992998 0.120918580123308 0.118604838739584 0.123140488728642 0.118505706419318 0.122706758557435 5 5|0 +|/ 18061645 18062472 18061980.889 18060198 18062723 + gene protein_coding_gene TRUE TRUE AT5G44720.1|AT5G44720.2 molybdenum cofactor sulfurase family protein similar to molybdenum cofactor sulfurase family protein [Arabidopsis thaliana] (TAIR:AT1G30910.1); similar to molybdenum cofactor sulfurase-like protein 1 [Oryza sativa (japonica cultivar-group)] (GB:ABH88162.1); similar to Os09g0560700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063929.1); contains InterPro domain MOSC, N-terminal beta barrel; (InterPro:IPR005303); contains InterPro domain MOSC; (InterPro:IPR005302) 0.963239585154142 7.89193485687654 9.42923668078175e-06 0.000260232476274493 12.0014152984581 20.1845971124053 0.963239585154142 0.150845578189893 AT5G40530_at 5.22280380399738 5.66223585143317 6.89906082011663 6.94039695858243 6.98437452537124 6.03825183700606 5.50607998729378 5.00765619602811 3.8369165925424 4.0827090462554 5.23703278445668 4.95337404185886 4.70022218615847 4.68050131103151 5.26539155190304 5.07255423425595 4.649822948597 4.9354681859924 4.0564440686957 0.285609548858583 0.283393344138069 0.288262582873373 0.290141648297392 0.294682646052688 0.285836459509333 0.290867581764029 0.287590314442016 0.299749917290458 0.283659571582777 0.279916347028627 0.282230202016392 0.2820785894752 0.30286556756778 0.281467868364682 0.279916347028627 0.294570521858137 0.289448138612459 0.279984934094070 5 5|0 +|/ 16252367 16253125 16252658.5 16251725 16253484 + gene protein_coding_gene TRUE TRUE AT5G40530.1|AT5G40530.2 similar to Protein of unknown function DUF691, methyltransferases-related [Medicago truncatula] (GB:ABE86909.1); contains InterPro domain Methyltransferases-related; (InterPro:IPR007823) 1.15529987264078 7.88870370430212 9.46468662165193e-06 0.000261044675636958 11.9978104430625 10.4970170681600 1.15529987264078 0.200204398187909 AT5G14220_at 6.70189172655222 7.00914526141 7.53821898292747 7.28310345497537 7.73069085145844 7.40153029630141 6.53944659554427 6.42614434474808 6.44195048225663 7.0553467024957 7.59346198014049 8.05616373946157 7.54598500395926 7.21688274821956 7.9464371315974 7.81479249111668 7.29776786616989 7.39251890626226 7.18115557300195 0.169027361824520 0.161661886812594 0.166802402370138 0.167046338109095 0.165580080004072 0.170595467960872 0.165377332842819 0.166275019584396 0.178647774587779 0.164751701832077 0.161954659341093 0.161661886812594 0.161661886812594 0.172380423055765 0.175105082093925 0.161661886812594 0.178483622501667 0.165089875202125 0.170193768847116 5 5|0 -|/ 4583538 4584679 4583971 4583271 4587429 - gene protein_coding_gene TRUE TRUE AT5G14220.1 HEMG2/MEE61 (maternal effect embryo arrest 61); oxidoreductase/ protoporphyrinogen oxidase similar to PPOX (PROTOPORPHYRINOGEN OXIDASE), protoporphyrinogen oxidase [Arabidopsis thaliana] (TAIR:AT4G01690.1); similar to protoporphyrinogen IX oxidase [Glycine max] (GB:BAA76348.1); similar to Amine oxidase [Medicago truncatula] (GB:ABE79724.1); similar to Protoporphyrinogen oxidase, mitochondrial (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) (GB:O24164); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Amine oxidase; (InterPro:IPR002937); contains InterPro domain Protoporphyrinogen oxidase; (InterPro:IPR004572) 0.76720628089991 7.88272525924383 9.53065813100497e-06 0.000262697119811939 11.9911370544968 14.3291808488816 0.76720628089991 0.0916818617827882 AT5G40630_at 2.82097958769257 3.04034456554384 2.72901619521372 2.95018712210479 3.24584829413605 3.10016026243893 2.50596843600104 2.84223308283704 2.17126012567249 2.38888428738584 3.45690219258302 4.01328004943153 3.97876794232512 3.83549961027901 3.52236498993024 3.9393546471049 3.69817567687968 3.67789972293757 2.88345087376368 0.223416229122438 0.219294599802835 0.229303627502076 0.222617494045098 0.221831072690667 0.224941257855841 0.219294599802835 0.225124819268128 0.229017532621909 0.221150266441364 0.229686942372448 0.230587245825975 0.226898251280902 0.225754610210959 0.223927982334746 0.223063239697858 0.235922464727902 0.229572581635952 0.232109002200833 5 5|0 -|/ 16288630 16289613 16289240.4 16288368 16289698 - gene protein_coding_gene TRUE TRUE AT5G40630.1 ubiquitin family protein similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT5G14360.1); similar to Os04g0483000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053121.1); similar to H0525D09.13 [Oryza sativa (indica cultivar-group)] (GB:CAH66973.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.74400186272398 7.88016961187216 9.55901083231284e-06 0.000263311221704959 11.9882829479955 6.02758170968327 0.74400186272398 0.0832348836464058 AT5G23750_at 6.64967644869595 6.64625168612134 8.30796416483778 8.57388814308788 8.48560987509579 8.47128379907014 9.22675781881172 9.0929603002206 7.46409245003968 7.93566728350558 8.94123820082208 7.94095643440045 8.93845777130105 8.46670770318442 7.56605683323959 8.90153378791782 9.19987997854948 8.56487695707592 7.92650201880146 0.181648001580582 0.169710383862278 0.169633418522309 0.166978993351759 0.162836149673659 0.164166665523914 0.165010871921041 0.169932702299143 0.176464971941306 0.162330562671708 0.158425890555599 0.164711387447301 0.15993322187916 0.164481633614798 0.168440626697490 0.158425890555599 0.170152308454279 0.163471461843808 0.161343988857699 5 5|0 -|/ 8010022 8011403 8010891.5 8009809 8011622 - gene protein_coding_gene TRUE TRUE AT5G23750.1|AT5G23750.2 remorin family protein similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT3G48940.1); similar to Remorin (pp34) (GB:P93788); contains InterPro domain Remorin, N-terminal region; (InterPro:IPR005518); contains InterPro domain Remorin, C-terminal region; (InterPro:IPR005516) 0.67265890312814 7.87247641237286 9.64491157820267e-06 0.000265508747968861 11.9796862878550 16.3519910507061 0.67265890312814 0.0515790880360125 AT5G15930_at 7.13382552350036 7.07091794893067 7.46959072218831 7.20658418587197 8.1449185499761 7.63890716811567 6.93083954676433 7.0730076368756 7.29093967962669 7.16240063604588 8.35558572470214 8.3868647818916 8.10072970564268 8.3022076926388 8.43120440237764 8.35959913155808 7.963194343927 8.1403532643943 7.21830975319069 0.164968875539384 0.160158153768455 0.157307088890228 0.159510132778753 0.159263481148484 0.159259233440262 0.167729609329922 0.164793908623621 0.171174749938424 0.169381640662152 0.159366752336368 0.161913531086257 0.157026605557040 0.165914588661080 0.161678568337458 0.159856231459254 0.166014124670315 0.161599552643886 0.174266937828767 5 5|0 +|/ 5201124 5202223 5201774.667 5199714 5202452 + gene protein_coding_gene TRUE TRUE AT5G15930.1 PAM1 (PLANT ADHESION MOLECULE 1); RAB GTPase activator Encodes a putative plant adhesion molecule. similar to plant adhesion molecule, putative [Arabidopsis thaliana] (TAIR:AT3G02460.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96952.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.796968258562027 7.8716510276913 9.65417707086302e-06 0.00026559518007001 11.9787635255026 15.0729992788675 0.796968258562027 0.102291129707532 AT5G52230_at 2.55244518768729 2.80044565488041 3.79089015604335 3.63060588355310 3.67861584738595 4.04982635988460 3.30243193529185 2.93037414204363 2.07110691195925 2.53959658990618 3.45824737826002 3.51114838865799 3.3448032370898 3.32184988188809 3.28194744128412 3.47992167904038 3.82892159182684 2.97292153621858 3.44567670023592 0.241388254375718 0.236676572072461 0.248727282547838 0.236676572072461 0.238229166413713 0.243810503542417 0.240068271277177 0.23821221592586 0.258108314917221 0.242981881675118 0.236676572072461 0.236676572072461 0.243280501016787 0.236819523921757 0.242843282314786 0.236676572072461 0.243523064609371 0.242976927659976 0.243748639516974 5 5 - 21225426 21225885 21225640.727 21225114 21229035 - gene protein_coding_gene TRUE TRUE AT5G52230.1 MBD13 (methyl-CpG-binding domain 13) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to futsch CG3064-PB [Apis mellifera] (GB:XP_001121015.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 0.80278520307853 7.86837417265995 9.69105691708106e-06 0.000266440716768778 11.9750992158274 6.38466950042144 0.80278520307853 0.104324770188844 AT5G46190_at 5.56959587891967 5.98953455737335 6.21689733451842 5.7484307859302 7.20144769242244 6.89612356350363 6.02387637903976 5.7212343126117 5.39072594125282 5.86380287136989 6.39097265917289 6.98419033178414 6.78830077296948 6.50390432541209 6.52025773973853 7.07725066045331 6.49718833306558 6.75252908770581 5.52957952935254 0.219103590480455 0.214268108528724 0.220476106469856 0.210103311936785 0.214667206428359 0.218516925834995 0.212179361540457 0.221452222239220 0.217895573147780 0.217805412108265 0.213713596769962 0.213300440733822 0.221318906909288 0.216852887765426 0.219821297063712 0.210103311936785 0.240785053197909 0.220571984372185 0.210103311936785 5 5 - 18740665 18741411 18741023.636 18740345 18743427 - gene protein_coding_gene TRUE TRUE AT5G46190.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G18375.2); similar to Os08g0200400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061211.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE79454.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.892143010118431 7.86446837495931 9.73521419731278e-06 0.000267485136881092 11.9707298101851 12.3129060727630 0.892143010118431 0.131865433263913 AT5G46160_at 7.1258844750382 7.42737387433014 7.64573154690482 7.73918660926954 7.79043332032769 7.77762922758648 7.27279056199585 7.29973578028992 6.3593781577427 6.94149843236534 7.29897188740645 7.92504519082936 7.79921599308841 7.69501897355791 7.72896474034142 8.11542913150183 7.94006894599318 7.27810887144884 7.17168206358395 0.185525634913915 0.176501897807738 0.176257829254252 0.179339289940353 0.176374857030708 0.176901144924429 0.178814558315642 0.173192943694411 0.200430055360645 0.188017444688965 0.181087059089022 0.173192943694411 0.173192943694411 0.184904457543701 0.175565667904346 0.173192943694411 0.182198750673274 0.18991844191142 0.195123489903548 5 5 - 18728726 18729031 18728876.818 18728387 18729750 - gene protein_coding_gene TRUE TRUE AT5G46160.1|AT5G46160.2 ribosomal protein L14 family protein / huellenlos paralog (HLP) similar to HLL (HUELLENLOS), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G17560.1); similar to Ribosomal protein L14b/L23e [Medicago truncatula] (GB:ABE94699.1); contains InterPro domain Ribosomal protein L14, bacterial and organelle form; (InterPro:IPR005745); contains InterPro domain Ribosomal protein L14b/L23e; (InterPro:IPR000218) 0.6776078759911 7.85950550148906 9.79163609727294e-06 0.000268865003874789 11.9651750512390 14.7832402668020 0.6776078759911 0.0548667065128259 AT5G16270_at 8.72317537093028 8.7064329685018 9.63256631497574 9.498216489985 9.74412732833861 9.50348429568628 8.91106223375059 8.78640575685298 8.90240905878542 8.65439810187754 9.35131152885286 9.45504718491614 9.4000634833165 9.38846654886416 9.01348181704351 9.39432668014517 9.32651381163733 9.31937939071427 8.83758420127234 0.109592653056534 0.108313136072220 0.104207547019627 0.111017082032085 0.104207547019627 0.107525427631065 0.109412355703305 0.10803265877188 0.110236380181105 0.106740440869490 0.109224821161345 0.107320681269257 0.108920926748612 0.111080483328087 0.109128874216649 0.108736052197405 0.107593217268053 0.112119425703071 0.113811483654439 5 5|0 +|/ 5321257 5322294 5321704.7 5316302 5322699 + gene protein_coding_gene TRUE TRUE AT5G16270.1 ATRAD21.3 (Arabidopsis homolog of RAD21 3) similar to SYN3 (Sister chromatid cohesion 1 protein 3) [Arabidopsis thaliana] (TAIR:AT3G59550.1); similar to cohesin-like protein [Oryza sativa (indica cultivar-group)] (GB:AAP79440.1); contains InterPro domain Rad21/Rec8 like protein, C-terminal; (InterPro:IPR006909); contains InterPro domain Rad21/Rec8 like protein, N-terminal; (InterPro:IPR006910) 0.672886438222652 7.85722307882769 9.81770297823777e-06 0.000269266032920197 11.9626193662690 18.25278597471 0.672886438222652 0.0524268496825798 AT5G03190_at 5.72372361138854 5.27618343308083 7.33515642015679 7.1262080016477 7.06018726772613 6.68245083519299 8.04351733389661 7.46420873039823 6.7672834435673 6.31015146065215 7.48679988205674 8.11764859395024 7.88532388573713 8.15974042938131 7.37505159068573 8.62702841319306 8.37732069249096 8.26528364973443 6.63393639407541 0.179465538628333 0.201562147797672 0.196259888929231 0.176138661384915 0.175372897153888 0.181104967812033 0.189972893014562 0.180570648947516 0.194259215546588 0.181252017362795 0.170269620747125 0.178858049121784 0.174949379513855 0.174664703275627 0.184640187886894 0.176130146354353 0.181788125332007 0.175578225663195 0.179647181789365 5 5 + 759563 760105 759794 757845 760381 + gene protein_coding_gene TRUE TRUE AT5G03190.1|AT5G03190.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53400.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD32814.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain "Winged helix" DNA-binding domain (SSF46785) 0.945204948355965 7.85713925231002 9.81866176219009e-06 0.000269266032920197 11.9625254909964 14.1425703249786 0.945204948355965 0.147069477792505 AT5G45060_at 6.13484285852629 6.22159937258078 6.81030851747102 6.90178537595364 7.63253319636366 7.03009555310844 6.09467456046789 6.0444324285174 6.0918854533235 6.06948940960633 6.63089838416132 7.02054804916745 6.47013160209459 6.7314048626126 6.25879083081288 6.8298964735956 7.10608137185936 6.3773941392762 5.92648577154208 0.176256912604819 0.176937286672692 0.177785688056988 0.175273848797738 0.203384291455228 0.181992455135324 0.181613370159846 0.174922098202325 0.175372146001569 0.177514919251433 0.178678090132334 0.174193799468924 0.180274575093022 0.185157042867047 0.17803688725401 0.173513685307849 0.187533887724264 0.18261121329385 0.172756464586117 5 5 + 18202695 18203225 18202867.818 18199265 18203722 + gene protein_coding_gene TRUE TRUE AT5G45060.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) 0.809324845870651 7.85623660280872 9.82899242157211e-06 0.000269377896170046 11.9615145790301 12.9624990290510 0.809324845870651 0.106867398405707 AT5G16610_at 4.16798596076011 4.95585903978512 5.8441530242045 5.71295898585672 7.03054600886245 6.47547762368357 5.5653917518001 5.17879930736947 4.1771267158924 4.99510079983401 5.22794970265977 5.6253284601069 6.54627944855142 5.85461250820073 4.64870253316143 6.19347974462722 5.90919429998562 5.52008767201368 5.35107351610258 0.271235755869527 0.261104853233407 0.271408530206837 0.263315473544253 0.267437756152466 0.275401702449757 0.261104853233407 0.261104853233407 0.272306878065228 0.262997680629635 0.26463003588931 0.262741253493406 0.261416297279081 0.265329214252407 0.266142700916362 0.265232807050454 0.267359538512586 0.268467240670732 0.261104853233407 5 5|0 -|/ 5445095 5445850 5445418.9 5444925 5448316 - gene protein_coding_gene TRUE TRUE AT5G16610.1|AT5G16610.2 similar to No apical meristem protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94699.1); similar to Os03g0221300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049412.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05323.1) 1.07418942397173 7.8556976017335 9.83516678860012e-06 0.000269377896170046 11.9609108813765 10.8822987828434 1.07418942397173 0.181130497160816 AT5G07250_at 8.0716043136475 8.2548026514374 8.91797231965278 8.9512704151861 9.50191145308128 9.26140418514367 8.98679399972899 9.03490925377848 8.72561312603357 8.64772236238924 9.4578090049743 9.24935354773611 9.46795911369894 9.41310644905548 9.04798237036914 9.4715080276383 9.14331046018399 9.63008271998273 8.37529551188482 0.121923671176854 0.116172822807316 0.123473887162976 0.117363666816368 0.114326124488704 0.116534242695612 0.120135537344537 0.115494570147894 0.115778499374315 0.117956240649740 0.117706996130994 0.112202943125487 0.111725231430809 0.117619818149122 0.121762113326896 0.115133616421213 0.125015313152024 0.116415025321212 0.115918894172292 5 5|0 -|/ 2274484 2275238 2274821.7 2274261 2275991 - gene protein_coding_gene TRUE TRUE AT5G07250.1 rhomboid family protein similar to ATRBL2 (ARABIDOPSIS THALIANA RHOMBOID-LIKE 2), serine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G63120.1); similar to membrane protein [Saccharum hybrid cultivar H65-7052] (GB:AAA02747.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) 0.674187000110102 7.85393773068064 9.85535565638216e-06 0.000269760443335393 11.958939513942 17.8440915548607 0.674187000110102 0.0532910640763406 AT5G13970_at 5.95486978499368 6.9413652471886 7.64862865856723 7.61226726276542 8.167374342182 7.98203549373297 6.7961582603832 6.58267751854144 6.11398935296289 5.8129352548067 6.62743933475906 6.94013193051507 6.55616129429002 7.00170862616363 6.43711611861203 6.92073131139964 6.97088397653543 6.30428741511596 5.72154964995787 0.222126338507823 0.212465318495815 0.216795715005507 0.216276664724900 0.228542526314736 0.229601451703124 0.222180391252671 0.213882243341456 0.219951878760622 0.228840597860740 0.215980173805021 0.212465318495815 0.215206042729853 0.215688405233947 0.214118896940904 0.212768307741229 0.219527259138527 0.222528795391299 0.223849517537554 5 5 - 4506404 4506950 4506651.364 4506234 4507844 - gene protein_coding_gene TRUE TRUE AT5G13970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13310.1); similar to OSJNBa0039C07.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE05150.2); similar to hypothetical protein MA4_111B14.56 [Musa acuminata] (GB:ABF72009.1) 1.06039574244160 7.85313188266114 9.86461511087699e-06 0.000269843537025075 11.9580366894173 13.5119881977942 1.06039574244160 0.177701100759317 AT5G51620_at 5.75807829997127 6.5130965536247 7.4791218630236 7.3151645617725 7.34635960599364 7.12310800536998 4.97268468687926 5.78460836342373 6.5648719169043 6.36618262080678 7.59647776919809 7.63000210960276 6.78385322023607 7.57828241006519 7.06459554442276 7.53319208157696 6.39538994138508 7.20451603602173 6.5774831434363 0.25331981834704 0.238433005150735 0.232355361671274 0.237921766447654 0.241898836629774 0.235626972363585 0.249577727614770 0.249579454209171 0.232774530162064 0.241388528556936 0.237468234554777 0.232355361671274 0.236961778023650 0.241301888818999 0.250978500210414 0.234968482992371 0.269934911018490 0.233543561709594 0.244857903167828 5 5 + 20985177 20985317 20985242.25 20984272 20985478 + gene protein_coding_gene TRUE TRUE AT5G51620.1|AT5G51620.2|AT5G51620.3 Identical to UPF0172 protein At5g55940 [Arabidopsis Thaliana] (GB:Q9FG71); similar to EMB2731 (EMBRYO DEFECTIVE 2731) [Arabidopsis thaliana] (TAIR:AT5G55940.1); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366)|similar to EMB2731 (EMBRYO DEFECTIVE 2731) [Arabidopsis thaliana] (TAIR:AT5G55940.1); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366) 1.13963213920649 7.84910563076848 9.91101901545717e-06 0.000270849454749912 11.9535246727217 13.3995950088970 1.13963213920649 0.19776717672929 AT5G19330_at 7.255150977511 7.78750227766763 8.30606325582205 8.25745517437435 8.69561984237445 8.44325729446181 7.36978309494683 7.2520147580627 7.44918755409569 7.30381829810472 8.06458525127288 7.9719078621158 7.87109104144818 7.91865251807136 7.89960041503372 8.18905805360154 7.66292430375473 8.11425232156856 7.35548348193674 0.128948215831291 0.132559449562483 0.135004868904246 0.131618373369351 0.132976863850153 0.129105905246779 0.132060163168304 0.133229941629470 0.139359655704125 0.141851586256460 0.134099183808382 0.128147860546979 0.130817753354015 0.141390117435851 0.127485151743173 0.126914532611388 0.134217540622509 0.133134898645557 0.127038683779635 5 0|5 /|- 6508317 6509354 6508724.111 6507796 6512761 - gene protein_coding_gene TRUE TRUE AT5G19330.1|AT5G19330.2 armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G13060.1); similar to Neural adherens junction protein Plakophilin and related Armadillo repeat proteins (ISS) [Ostreococcus tauri] (GB:CAL58178.1); similar to Os05g0398100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055472.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069)|similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G13060.1); similar to Neural adherens junction protein Plakophilin and related Armadillo repeat proteins (ISS) [Ostreococcus tauri] (GB:CAL58178.1); similar to Os05g0398100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055472.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.800749320428544 7.84885788095634 9.9138821051338e-06 0.000270849454749912 11.9532469644426 15.5863585421880 0.800749320428544 0.104310037479692 AT5G19620_at 5.46899710704187 5.44388726502866 5.97566968257472 6.01985360655041 6.01202095775142 6.09992023298539 5.64377227415752 5.14150989554458 5.69871114191335 5.97626820704989 6.48166474465792 7.02256760888975 6.74756570347624 6.25933265870219 6.81302357799972 6.88444935256603 6.9147210611991 6.29051568627278 5.63141046515182 0.205342386424315 0.207569703717758 0.210297453852277 0.207401081482330 0.209544665739593 0.216279550803117 0.214748565761621 0.214171562362727 0.210680577001535 0.213179462241201 0.20857414414828 0.208449378901142 0.207829961864293 0.211297371929893 0.216417362083776 0.205342386424315 0.213731249671760 0.211753467621108 0.208038982445450 5 0|5 /|+ 6626859 6627615 6627312.25 6623206 6627848 + gene protein_coding_gene TRUE TRUE AT5G19620.1 OEP80 (ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA) AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75 similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G44160.1); similar to Os02g0196300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046192.1); similar to Surface antigen variable number [Anabaena variabilis ATCC 29413] (GB:YP_320615.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184); contains InterPro domain Surface antigen variable number; (InterPro:IPR010827) 0.755128964518885 7.84392494249725 9.97107535634477e-06 0.000272240442967201 11.9477158916672 11.9484672046671 0.755128964518885 0.0886770501668169 AT5G11250_at 5.73251186933078 6.32127282766345 5.78150233910046 6.66085084285371 6.40057073984302 6.25973718583337 4.49295100041904 4.600551271465 5.06315037906877 4.58929072038457 5.66785203338898 5.91423281406073 5.76889398148742 6.34768587213988 5.61425066747822 6.03487663922761 5.86440779836681 6.26638910601628 4.57632778122832 0.213100199266136 0.223875557528202 0.214363148827809 0.209386541107108 0.211644657609574 0.219760775290919 0.204163873027998 0.207809128315683 0.215618401955015 0.203665625986833 0.205482689330675 0.211806432984886 0.208182819652009 0.206829240690477 0.212264560626831 0.205063558012325 0.221223914670138 0.207833475565598 0.210666074527209 5 5 - 3588050 3588551 3588303.909 3587979 3591961 - gene protein_coding_gene TRUE TRUE AT5G11250.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G25510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) 1.09037209424080 7.84266724957525 9.98571418554959e-06 0.000272378653678038 11.9463052021061 11.1201167966876 1.09037209424080 0.185685732221204 AT5G38290_at 7.04493638440398 6.68379930926521 7.52847552601576 8.27413544792217 8.76873465514448 8.033329347058 7.5489651126742 7.17536500568118 7.00947735726777 6.96532415810392 8.13285678064804 8.17381599503307 8.01177506410565 8.02620483962456 8.34259204989563 8.56595553422726 8.20976055061912 8.13362350956981 6.79496291349805 0.203362974740977 0.196646462640972 0.20425547062888 0.193043521826796 0.194767144308239 0.190367500163096 0.188936759038545 0.208608357732002 0.213453502867457 0.194520787194590 0.189650827650144 0.192167678297836 0.188936759038545 0.199513168593075 0.197329825504161 0.188936759038545 0.200451111207771 0.198392389041142 0.194268632763011 5 5|0 +|/ 15320974 15322310 15321631.857 15320566 15322778 + gene protein_coding_gene TRUE TRUE AT5G38290.1|AT5G38290.2 peptidyl-tRNA hydrolase family protein similar to peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G16140.2); similar to Peptidyl-tRNA hydrolase [Medicago truncatula] (GB:ABE85649.1); contains InterPro domain Peptidyl-tRNA hydrolase; (InterPro:IPR001328) 1.15711026093555 7.84241080819788 9.98870186512392e-06 0.000272378653678038 11.9460175401701 15.1936315235649 1.15711026093555 0.202320568670637 AT5G39850_at 3.73162409586733 4.70130057036116 4.64028475802166 5.32180346548951 6.44674319965255 5.55327328946401 3.99455299749401 4.37778399553386 2.82306447106774 3.31190262288768 4.85166622921493 5.08270214719993 4.87151256828769 4.6953579464815 4.95622980931483 4.43602589898681 5.06647904640947 3.80992227424803 3.36304356610188 0.265457574926617 0.254995732730864 0.257768642247671 0.261307284110442 0.255479068119569 0.269966466088975 0.254824529904601 0.265218071358115 0.259329411178894 0.259541394263878 0.256876572455436 0.257285479067304 0.258356324646343 0.265561327374595 0.254824529904601 0.254824529904601 0.269545269293378 0.264152868077939 0.257338491881741 5 5 + 15967650 15968299 15968019.818 15967250 15968653 + gene protein_coding_gene TRUE TRUE AT5G39850.1 40S ribosomal protein S9 (RPS9C) Identical to 40S ribosomal protein S9-2 (RPS9C) [Arabidopsis Thaliana] (GB:Q9FLF0); similar to 40S ribosomal protein S9 (RPS9B) [Arabidopsis thaliana] (TAIR:AT5G15200.1); similar to 40S ribosomal protein S9 [Catharanthus roseus] (GB:CAG47084.1); contains InterPro domain Ribosomal protein S4; (InterPro:IPR001912); contains InterPro domain Ribosomal protein S4/9, eukaryotic and archaeal form; (InterPro:IPR005710); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) 1.42222210000416 7.84103064295666 1.00047981197699e-05 0.000272646101661087 11.9444692017963 8.78954106817067 1.42222210000416 0.265281832046684 AT5G27150_at 8.35424889551978 8.63280473676272 9.57789017066756 9.7771853364368 10.1615857511594 9.67471654717544 9.5361251884802 9.56180084158428 8.77221614142284 8.71988398771064 9.62409573237753 9.60069659912151 9.60170739899741 9.45410236326857 9.25683250062501 9.66377719609384 9.56311777348818 9.52900728321566 8.67181395790791 0.137646776547636 0.131999602907958 0.137290776687979 0.138152436154387 0.133905461889316 0.144869967187055 0.133256393915574 0.129022410589723 0.146244760312261 0.132746372722881 0.130881760666530 0.130493757870895 0.129022410589723 0.137108217557456 0.136315906663602 0.129483663153208 0.149547684685374 0.136591032563688 0.138661470755155 5 5 + 9556413 9557239 9556968.091 9553441 9557516 + gene protein_coding_gene TRUE TRUE AT5G27150.1 NHX1 (NA+/H+ EXCHANGER); sodium:hydrogen antiporter Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. Identical to Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1) (NHE-1) (NHX1) [Arabidopsis Thaliana] (GB:Q68KI4;GB:O04655;GB:Q8LRL1;GB:Q9ZPK3); similar to NHX2 (sodium proton exchanger 2), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G05030.1); similar to NHX4 (sodium proton exchanger 4), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G06370.1); similar to sodium proton exchanger [Thellun (GB:ABF48496.1); similar to Na+/H+ vacuolar antiporter [Brassica napus] (GB:AAO38856.1); similar to Na+/H+ antiporter [Thellun (GB:ABJ97691.1); contains InterPro domain Sodium/hydrogen exchanger subfamily; (InterPro:IPR004709); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.79598097299552 7.8375967611449 1.00449676458523e-05 0.000273568835161171 11.9406158447775 18.5385305842627 0.79598097299552 0.103111072020404 AT5G27430_at 6.88930213484646 7.51107118673141 7.67783164593143 8.14589562369286 8.21594647055577 7.80838445273561 6.62936407701011 5.8843196631324 5.8633064083176 5.48449217250057 6.93727922024198 7.12695291026806 6.78446274351562 6.48848375786676 7.07141392365728 6.55917362586255 6.30639021581836 6.6097143401725 5.6954262119688 0.235192198240512 0.238395539296772 0.240468998318621 0.242787446811405 0.232770533788351 0.237089674838776 0.233861659459841 0.238349525851145 0.244118644907504 0.238524720754807 0.233177367603797 0.235508341372391 0.233346599654780 0.248351839922470 0.23912655003357 0.232404628170255 0.247681107664013 0.246195632190171 0.249606943215252 5 5|0 +|/ 9687495 9689155 9688154.1 9687381 9689423 + gene protein_coding_gene TRUE TRUE AT5G27430.1 signal peptidase subunit family protein similar to signal peptidase subunit family protein [Arabidopsis thaliana] (TAIR:AT3G05230.1); similar to Signal peptidase 22 kDa subunit [Medicago truncatula] (GB:ABD32389.1); contains InterPro domain Signal peptidase 22 kDa subunit; (InterPro:IPR007653) 1.14395459702261 7.835063057245 1.00747185672645e-05 0.000274206843674073 11.9377716625418 13.5535437933817 1.14395459702261 0.199342043442997 AT5G10780_at 9.8475513310038 10.1318465892999 10.5613789837999 10.7585611568085 11.2261141935750 10.6651668249634 9.90919395794834 9.64820568549502 9.7093170229739 9.2588285904484 10.1871437509038 10.1521982320551 10.3152559081694 10.302935799554 10.0491584515680 10.1149015386911 9.88293979566386 10.2993239188801 9.13678509139746 0.106816766899037 0.103441472236614 0.103182870745664 0.104118023672179 0.106147513189558 0.105591538807866 0.103895872895072 0.103378121054927 0.111705954364440 0.108717469882954 0.101560686213037 0.100825062641254 0.103184960216874 0.104228582234848 0.102756257925594 0.101270911977152 0.115072930393012 0.100825062641254 0.105824322342605 5 5|0 +|/ 3408457 3409736 3409118.3 3408280 3410071 + gene protein_coding_gene TRUE TRUE AT5G10780.1|AT5G10780.2 similar to Os03g0360500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050154.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96076.1); contains InterPro domain Protein of unknown function DUF1077; (InterPro:IPR009445) 0.856638919172846 7.82526931056202 1.01906154277374e-05 0.000277187242373661 11.9267700720186 20.1091485450495 0.856638919172846 0.122671398665958 AT5G11910_at 8.14676996644237 8.44792971622369 9.24587228019412 9.33830444425364 9.04033762777316 8.82986369166971 8.19545068409536 8.18620997218577 7.27954296206279 7.8454117429947 7.83093216198696 8.19688988949904 8.18733900661191 8.52974990952876 7.14862715988764 8.25233384739066 8.36592621853687 8.35967691544112 7.63405791457895 0.198304291114888 0.188403928201385 0.194444610053689 0.189016724901180 0.189731793277918 0.187683348507214 0.187246157211623 0.195647152623515 0.223674266354174 0.197630528346830 0.198076408887457 0.193765240947154 0.189963326136044 0.189404785553786 0.209125455096752 0.186116134452552 0.209236802306472 0.202132881789371 0.200120294656767 5 5|0 -|/ 3836568 3837400 3836929.7 3836332 3838214 - gene protein_coding_gene TRUE TRUE AT5G11910.1|AT5G11910.2 esterase/lipase/thioesterase family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT3G47590.1); similar to esterase/lipase/thioesterase family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD44964.1); similar to Os01g0579900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043402.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.696050637483709 7.82076172895455 1.02444402233098e-05 0.000278476587029045 11.9217024516215 16.5264782620993 0.696050637483709 0.0655841943835825 AT5G08020_at 1.32897884283729 1.26691281623668 2.51309396899428 2.26124011407234 0.89162970937597 0.979876188783517 1.79353173272060 1.78788860025441 0.90382058943025 1.11712338023449 1.98386728543901 3.06184142533039 1.51288770287218 2.39251030024023 2.65592072096466 1.47964280145171 1.80755593916963 1.57810871563540 0.543373331335724 0.210688282237906 0.206849294552793 0.212954140445636 0.211663471397765 0.205149691915124 0.202352459684096 0.206984750537187 0.201366365893253 0.203019948319212 0.212316344532684 0.207030544769924 0.208509558058511 0.206084508657073 0.210704853818840 0.201040476882936 0.216175216886253 0.21106784061342 0.224418053629909 0.203074444283379 5 5|0 +|/ 2574009 2574806 2574374 2572108 2574880 + gene protein_coding_gene TRUE TRUE AT5G08020.1 replication protein, putative similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT5G61000.1); similar to Os03g0214100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049369.1); similar to replication protein A1 [Oryza sativa] (GB:AAB71836.1); similar to replication protein A 70b [Oryza sativa (japonica cultivar-group)] (GB:BAC77529.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.66070071250768 7.81619611581367 1.02992710919121e-05 0.000279791647105282 11.9165669353112 3.05980114418675 0.66070071250768 0.0474251378996144 AT5G16660_at 10.2002669045663 10.2736402227429 10.8034760944025 10.7586402494057 11.1798543028765 10.8257110507931 10.1270761170649 10.2369567198322 10.4917702930050 10.0301169433414 11.0531667170447 10.8856503150306 10.9019437091178 10.9317867887376 10.7349993464336 10.9594350263718 10.6935086169274 10.8963900352457 9.9962010831668 0.095285496819485 0.0975481996068156 0.0966726140034653 0.10235299796383 0.0943345445271828 0.098745959511429 0.0966548324026393 0.100222610247400 0.0971942257635718 0.0930856940117532 0.095106435204449 0.0930856940117532 0.0930856940117532 0.0944602572943124 0.103229107949258 0.0930856940117532 0.101848235178745 0.0932372454573545 0.0930856940117532 5 5 - 5465704 5466427 5466002 5465487 5467066 - gene protein_coding_gene TRUE TRUE AT5G16660.1|AT5G16660.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02900.1); similar to hypothetical protein [Plantago major] (GB:CAH59416.1) 0.695924698088569 7.81231788422992 1.03460958105919e-05 0.000280887700108685 11.9122025036339 21.0781057956445 0.695924698088569 0.0658711355759233 AT5G54650_at 3.16263394132809 3.39833772985013 3.51592619503773 3.68765835472925 4.16084356375657 3.65077418498961 2.96370838640815 3.29690234064415 3.23265205170931 3.34264028342916 4.45562921040792 5.08009711775853 4.06836629120281 4.28824340896882 4.30238205467266 4.31106769927005 3.49734019211376 4.08548542284752 2.8388444170408 0.206450634619102 0.197706447625476 0.200305638796457 0.203684571567476 0.202189580122180 0.198664878231198 0.197448215588659 0.198512663910477 0.201501535123174 0.19821030508572 0.196047175335208 0.199461018697753 0.200096283321711 0.197398404684141 0.199687034905598 0.198268102503741 0.203640809116143 0.198623456185402 0.197748487389894 5 5 - 22215092 22215476 22215267.636 22214855 22219336 - gene protein_coding_gene TRUE TRUE AT5G54650.1|AT5G54650.2 Fh5 (FORMIN HOMOLOGY5); actin binding Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G15200.1); similar to Pyridoxal-dependent decarboxylase; Actin-binding FH2 [Medicago truncatula] (GB:ABE93173.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104); contains InterPro domain Plant inhibitor of proteinase and amylase; (InterPro:IPR011052) 0.835717907833082 7.80659219607574 1.04156469877012e-05 0.000282598999234529 11.9057554789953 7.17915909145047 0.835717907833082 0.116890347903222 AT5G47640_at 8.45724912079023 8.68401798795719 9.66448976304562 9.70857159933108 9.84709148858284 9.89377577104768 9.83422500116103 9.7020810917059 8.24623326237923 8.54059027066925 9.01572349543464 8.81342458087463 9.5843593940831 9.38126843700178 8.64095702858687 9.2502327829126 10.0099322750291 9.38425585797829 8.86828932115296 0.120053252836251 0.117938958369696 0.119418018475692 0.116372098321533 0.117618257097447 0.114728582173731 0.116621323404772 0.121495740770009 0.12042379784613 0.130258092984208 0.116046356807578 0.126962032168461 0.116607106361555 0.113279896496880 0.121310528803437 0.113279896496880 0.116699287553943 0.117549063864577 0.120773168186128 5 5 + 19326643 19327185 19326848.364 19326453 19327498 + gene protein_coding_gene TRUE TRUE AT5G47640.1 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) Identical to Nuclear transcription factor Y subunit B-2 (AtNF-YB-2) (Transcriptional activator HAP3B) (NFYB2) [Arabidopsis Thaliana] (GB:Q9FGJ3;GB:O23634;GB:Q9FV58); similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family [Arabidopsis thaliana] (TAIR:AT4G14540.1); similar to transcription factor Hap3b, putative [Brassica oleracea] (GB:ABD64993.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-like transcription factor CBF/NF-Y/archaeal histone, subunit A; (InterPro:IPR003956); contains InterPro domain Histone-like transcription factor/archaeal histone/DNA topoisomerase; (InterPro:IPR003957); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.658701900926013 7.8055038641455 1.04289242117614e-05 0.000282641404935680 11.9045295603847 18.3797994860634 0.658701900926013 0.0467596015118204 AT5G57140_at 3.58362505776576 2.80283554794936 4.10532532940678 3.90978103089012 4.58265753019782 4.27319267554638 3.24038618526336 2.82943518941467 2.10446737716265 2.70544714991827 3.22853488282300 3.36769652169963 3.71890340475582 3.47981730094405 2.96461637602534 3.37767881267234 3.72952069113540 3.14596932509793 2.5922364320156 0.225582363366507 0.221864332042982 0.218820804348974 0.225384620356202 0.231331007455876 0.228192746353699 0.220466286012312 0.223420642505574 0.224095624687644 0.235431628353992 0.217907583894313 0.219243078499793 0.219458396473043 0.222316234834235 0.228596958266114 0.218997791465838 0.220231837947330 0.227678377932082 0.218221663435726 5 5 + 23167915 23168567 23168198.636 23167106 23168596 + gene protein_coding_gene TRUE TRUE AT5G57140.1 ATPAP28/PAP28 (purple acid phosphatase 28); acid phosphatase/ protein serine/threonine phosphatase similar to ATPAP29/PAP29 (purple acid phosphatase 29), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G63140.1); similar to Os06g0699200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058469.1); similar to calcineurin-like phosphoesterase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53995.1); contains InterPro domain Phosphoesterase At2g46880; (InterPro:IPR011230); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 1.00643857888700 7.80533805310755 1.04309486455426e-05 0.000282641404935680 11.9043427742034 6.58789272701746 1.00643857888700 0.165311960920786 AT5G09420_at 2.35550172990851 2.55863582800775 3.60045201500464 3.84146879744762 2.30299153946057 2.50763010343257 1.81546097227360 1.65487437667526 0.683656651783694 1.79580640608963 1.44326056537662 1.97217471450377 1.73954388875506 1.89637071148214 1.5878236134337 2.10041814835933 1.16516366330051 1.64866485345248 1.26720784015690 0.184194712704211 0.184194712704211 0.187402506924803 0.200613098643761 0.192833966486882 0.193409749845870 0.188659086470852 0.187339727155762 0.184713018473630 0.184194712704211 0.184194712704211 0.184194712704211 0.185429105680860 0.196941864856478 0.186588616906167 0.188494895716788 0.188252418460944 0.188502782507146 0.188878745308993 5 5|0 +|/ 2930678 2931675 2930995.375 2928317 2931950 + gene protein_coding_gene TRUE TRUE AT5G09420.1 chloroplast outer membrane translocon subunit, putative similar to chloroplast outer membrane translocon subunit, putative [Arabidopsis thaliana] (TAIR:AT3G17970.1); similar to chloroplast Toc64-1 [Physcomitrella patens] (GB:AAS47584.1); similar to Os02g0754500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048155.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Amidase; (InterPro:IPR000120); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.706152303804809 7.80486172479363 1.04367666334648e-05 0.000282641404935680 11.9038061705872 4.05116082986449 0.706152303804809 0.0707236000412221 AT5G45930_at 9.00210021111228 9.07281142609741 8.51291316280288 8.68151617553372 9.50327917709503 9.35071860288611 8.95107689186531 8.9077572255291 8.89072506256498 8.8474763996753 10.1190771272639 10.4340362210497 9.78770231984006 10.0472262084671 10.6692695569763 10.0707145524736 9.4122969115051 9.94791022895875 8.62524761226143 0.123740705143859 0.115319226462879 0.123165434163423 0.120826419857007 0.120198468467155 0.110395273676826 0.125486189436441 0.111845997949922 0.122403708629820 0.11737539159243 0.116248012181725 0.111893365443467 0.112211736073327 0.113766049237478 0.118737240081318 0.111798144369415 0.111475657166762 0.110608625148794 0.120229012972664 5 5 + 18646226 18646742 18646433 18645234 18646924 + gene protein_coding_gene TRUE TRUE AT5G45930.1 CHLI2; magnesium chelatase encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. similar to CHLI1 (CHLORINA 42), magnesium chelatase [Arabidopsis thaliana] (TAIR:AT4G18480.1); similar to Magnesium-chelatase subunit chlI, chloroplast precursor (Mg-protoporphyrin IX chelatase) (GB:P93162); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Magnesium chelatase, ChlI subunit; (InterPro:IPR000523); contains InterPro domain Magnesium chelatase ATPase subunit I; (InterPro:IPR011775) 0.650941561788988 7.80357448380829 1.04525068413956e-05 0.000282890974101826 11.9023558944427 18.4221943586072 0.650941561788988 0.0418843678076354 AT5G45250_at 7.84742962170855 7.81369868831028 8.43900075877435 8.4200154321041 8.91006444118816 8.30301278064084 6.53504662456319 6.75487466054136 7.8309321391994 7.78909265265248 8.39326357829776 8.31039039116304 8.21914005479043 8.2292401463285 7.85921165441749 8.44858048961142 8.12332161653446 8.0176508557648 7.90477858173958 0.152452614099125 0.154660259790715 0.158394058687684 0.157727188612785 0.152698509718509 0.157304918007181 0.164971910585735 0.163682551148142 0.160115358280614 0.155605534087757 0.157785723964837 0.153553209790118 0.152452614099125 0.157237379097295 0.162189297434839 0.159167408117281 0.169727597305632 0.164247483120123 0.161850625492994 5 5 - 18339152 18339689 18339506.364 18339141 18343249 - gene protein_coding_gene TRUE TRUE AT5G45250.1 RPS4 (RESISTANT TO P. SYRINGAE 4) RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to TIR-NBS-LRR type disease resistance protein [Populus trichocarpa] (GB:ABF81419.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.819379839114506 7.80142691780817 1.04788240770051e-05 0.000283426314369636 11.8999358553968 15.8987433624258 0.819379839114506 0.111929624448752 AT5G01970_at 5.10702057929916 5.09644111937281 6.40463519514245 5.66747958870476 6.52984212671099 6.15552567805445 4.77810520928151 4.55691401774998 5.06447064095974 4.75659556907169 5.73596049019508 5.91252622342432 6.06294539725025 5.9476448503954 5.23631177453471 5.27763188335419 5.64298069586493 5.47900119032409 5.42644094828905 0.226285675272180 0.215313285830104 0.219972725489608 0.226646872390636 0.220683683143408 0.215796324330728 0.227013079633619 0.220471863689974 0.226872639368444 0.218901167803741 0.217439995993031 0.22295801125167 0.217854048771707 0.216286952203883 0.216619396237000 0.219956640027545 0.232335552760389 0.215543776465153 0.224480856437131 5 5|0 -|/ 373025 373704 373328.667 372902 374951 - gene protein_coding_gene TRUE TRUE AT5G01970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G30050.1); similar to Os05g0315200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055171.1); similar to Os11g0118800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065600.1); similar to expressed protein-like protein [Sorghum bicolor] (GB:AAO16693.1) 0.94206167139417 7.799607574867 1.05011751102340e-05 0.000283853778031100 11.8978852192805 10.9091842889269 0.94206167139417 0.148115854062224 AT5G01390_at 5.8750651073381 5.80997525093284 6.2852285177425 6.55009133134656 6.64437630281715 6.57776534415783 5.71643879099746 5.7231828722433 5.69755174991261 5.4256055258333 6.2264550512847 6.23076790641006 6.18159994835205 6.10376518684128 6.37441533153672 6.46191085336938 6.31128852393953 6.69476471783274 6.07888407969227 0.163536984281961 0.172194863264649 0.166764538201840 0.164362757150059 0.169015416961790 0.179887879113201 0.163624007022033 0.165804109533769 0.169655880827754 0.163346126404984 0.161366817674380 0.165215379127588 0.162735936971480 0.16409138284651 0.164551093777067 0.167625860675262 0.172988096316146 0.171523037133558 0.160357215175723 5 5|0 -|/ 160539 161665 160890 160263 162298 - gene protein_coding_gene TRUE TRUE AT5G01390.1 DNAJ heat shock protein, putative similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT3G08910.1); similar to DnaJ-like protein [Nicotiana tabacum] (GB:AAF05720.1); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.661153511718915 7.79829803399108 1.05172949745675e-05 0.00028411238131236 11.8964089331842 12.1763328022429 0.661153511718915 0.0486007938798481 AT5G25560_at 9.46604326179929 9.08387728217492 10.2001993767864 9.87735126977871 10.2751767809175 9.861995857828 9.0382723463116 8.8158730552249 9.07594161396477 9.6006432161008 10.3158747298663 10.0758996878302 10.1754481416318 10.2882232655993 10.0422023500768 10.6384586718570 10.2752549511501 10.081042881512 9.84796379206267 0.0898933031966135 0.0871607000242278 0.0884304066705315 0.0882202642295152 0.0888358719898612 0.093539683882508 0.0924319686419924 0.093532391697774 0.110187230183808 0.0888666347202575 0.0868337141584665 0.0876692556349228 0.086104448802758 0.087509001518947 0.0896667567493733 0.0872363979986714 0.0903509600797552 0.0923055386041601 0.0869163623749244 5 5|0 +|/ 8899798 8901369 8900656.667 8897904 8901707 + gene protein_coding_gene TRUE TRUE AT5G25560.1|AT5G25560.2 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G22920.1); similar to Zinc finger, RING-type; Zinc finger, CHY-type [Medicago truncatula] (GB:ABE83637.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.840516022923846 7.79682200471138 1.05354962767969e-05 0.000284426855138346 11.8947446953682 19.4497153833443 0.840516022923846 0.118698552942300 AT5G08740_at 8.36436972669337 8.08081993165595 9.0895198673663 8.9333373275329 9.3668716344136 8.93880270395803 9.1510802839783 8.83691116186886 8.04030849162623 8.21855498305955 9.42290826244157 9.09688859027085 9.19724519023656 9.2409696616518 9.11698430572455 9.34841069765891 9.29500563271286 9.1012418553231 8.01240426576161 0.140859268300330 0.142941003587289 0.141590395823706 0.141698752706925 0.135931035330836 0.141485386544960 0.139844170241562 0.145771385063133 0.157275339649125 0.149621966917555 0.146802585850430 0.139359060225886 0.135931035330836 0.143316872874833 0.161430101059841 0.140619912301881 0.144064843642308 0.149874034445245 0.146492343987795 5 5|0 -|/ 2849270 2849781 2849523.4 2848507 2851429 - gene protein_coding_gene TRUE TRUE AT5G08740.1 NDC1 (NAD(P)H DEHYDROGENASE C1); NADH dehydrogenase similar to NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G07180.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I [Medicago truncatula] (GB:ABE86168.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.805435900810993 7.79610953570318 1.05442940877692e-05 0.00028448722945057 11.8939412792200 17.5041537570092 0.805435900810993 0.107619788673363 AT5G40380_at 3.37324870346612 3.98296268926375 5.72147325447441 5.63080414326289 6.79211325168891 6.86918766674181 7.69691709301399 7.63746168755327 6.9034354083681 7.39783967628061 9.08741205342574 8.69353135784951 8.56799478170471 8.3249563838025 7.81011180705827 7.69038490191733 6.87377095829187 7.82904621239915 6.93186302672956 0.277271441601200 0.265537578686804 0.258397207592207 0.25877769639143 0.248367682470712 0.269659517501831 0.246614405130423 0.24480312490113 0.256542710560296 0.246825317289575 0.247633348847745 0.246899868118943 0.251225340374954 0.261547282286404 0.247463456049554 0.24467816226662 0.249294128815696 0.245985134674055 0.250591880057340 5 5|0 +|/ 16171516 16172240 16172006.9 16169375 16172405 + gene protein_coding_gene TRUE TRUE AT5G40380.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G70530.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93633.2); similar to Os05g0130100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054549.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.806342694490554 7.79369836406542 1.05741269657886e-05 0.000285114706176363 11.8912218358580 13.5567029416076 0.806342694490554 0.107996016435776 AT5G62040_at 0.717725354430726 0.710352498813835 1.76671442752208 1.68217655281731 2.40928008602147 2.22223126689129 1.33968944643046 0.954644375974696 0.0607514523102578 0.831737575036332 0.500733446489788 0.600395811289326 0.727241804244162 0.488625203419128 0.139127081985806 1.53232348859549 1.90462755518850 0.923630017073182 0.63390588115307 0.221796321027685 0.222871726770465 0.221572158832079 0.219770677510243 0.236463727461896 0.228692968048255 0.214667450692091 0.218716970654641 0.218827121212106 0.229333636005541 0.221627507565803 0.224190192683628 0.217089245457248 0.214667450692091 0.216893896878337 0.215738460503480 0.243070475800390 0.217931451881217 0.218506175414035 5 5|0 +|/ 24940116 24940911 24940593.556 24940036 24940935 + gene protein_coding_gene TRUE TRUE AT5G62040.1 brother of FT and TFL1 protein (BFT) Identical to Protein BROTHER of FT and TFL1 (BFT) [Arabidopsis Thaliana] (GB:Q9FIT4); similar to TFL1 (TERMINAL FLOWER 1), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT5G03840.1); similar to flowering locus T like protein [Populus nigra] (GB:BAD08339.1); contains InterPro domain Phosphatidylethanolamine-binding protein; (InterPro:IPR001858); contains InterPro domain PEBP; (InterPro:IPR008914) 0.71639370630153 7.79279810946641 1.05852889693635e-05 0.000285238285057691 11.8902062907948 2.15579492804718 0.71639370630153 0.075521653734935 AT5G62890_at 8.14748163536203 8.50966476395636 8.05513814310219 8.0049292632044 8.52136829782746 8.45299675969882 8.08921026764327 7.74485195050548 8.68444007483264 7.62711066470719 9.48513428669667 9.89662551205808 8.87174094818417 9.25997306806344 9.97922546075577 9.50490838189102 8.3066379950233 9.62118221784489 7.70799706124222 0.218570541159989 0.215273533911572 0.219286428546431 0.236262337763718 0.212699077515608 0.224510578577313 0.216067841109635 0.213412691208469 0.218224585710458 0.233368099084097 0.211026794256183 0.216838947612368 0.213784676895323 0.210326490587063 0.209185441641332 0.208352339945063 0.225611094425801 0.208712020206436 0.218217498122538 5 5|0 +|/ 25263504 25264276 25263904.9 25260477 25264603 + gene protein_coding_gene TRUE TRUE AT5G62890.1|AT5G62890.2|AT5G62890.3|AT5G62890.4 permease, putative|permease Identical to Nucleobase-ascorbate transporter 6 (AtNAT6) (NAT6) [Arabidopsis Thaliana] (GB:Q27GI3;GB:Q3E869;GB:Q94CA7;GB:Q9FM07); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT5G49990.1); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G60030.1); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G10540.1); similar to Xanthine/uracil/vitamin C permease; Thioredoxin-related [Medicago truncatula] (GB:ABE83225.1); similar to root uracil permease 1 [Oryza sativa (japonica cultivar-group)] (GB:CAJ84113.1); similar to putative permease I [Lycopersicon esculentum] (GB:AAX73299.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) 0.747484255906044 7.79131446575667 1.06037120231756e-05 0.000285557250018326 11.8885324179098 16.8768023438668 0.747484255906044 0.0877226480218505 AT5G64800_at 3.48464128546747 3.68738683556151 4.31759027236509 4.55150131967627 4.47389989104423 4.18681632693743 3.22233816087605 3.12606331429949 2.88771775111434 3.16745111368139 3.50416466101982 3.52767851005041 3.65277906545456 3.47999914285915 3.03514978721256 3.76287078395084 3.72016957220299 3.66187291080180 3.29306344253347 0.232184511526588 0.232184511526588 0.249415257470250 0.251114856890710 0.238957906873913 0.241285955426446 0.235670522446282 0.232184511526588 0.236269590446897 0.233064535469421 0.236695646220185 0.233654525354808 0.233502521584540 0.232960822530664 0.232184511526588 0.232184511526588 0.236346437617901 0.232881909846807 0.232184511526588 5 5 + 25923314 25923599 25923467.091 25923309 25923629 + gene protein_coding_gene TRUE TRUE AT5G64800.1 CLE21 (CLAVATA3/ESR-RELATED 21); receptor binding Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. 0.714676335936121 7.78948221791175 1.06265116456458e-05 0.000285993606534134 11.8864648530288 7.21086117076365 0.714676335936121 0.0749360575081598 AT5G63610_at 7.5689096722256 7.85045137146236 8.47102709311022 8.46600126098285 8.64004451964212 8.34339348929225 7.54519651413498 7.76349632548498 7.75329026334046 7.98814007480846 8.62236790001037 8.5733128031451 8.47769244556379 8.53355999038392 8.54250676052195 8.74690205142924 8.25206706388536 8.2515581720843 7.78947001505295 0.175437081455482 0.171907792800917 0.183599057426699 0.182833700191354 0.177577826534154 0.181921718179623 0.177568655342991 0.177682482108524 0.203203478493377 0.183176739323842 0.175747429868656 0.171689257681809 0.171689257681809 0.181607658397381 0.174260842275976 0.171689257681809 0.190503160971759 0.191059952594057 0.177856871351984 5 5 - 25480871 25481387 25481164.909 25480663 25483123 - gene protein_coding_gene TRUE TRUE AT5G63610.1 HEN3 (HUA ENHANCER 3); kinase significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. similar to CDC2/CDC2A/CDC2AAT/CDK2/CDKA,1 (CELL DIVISION CONTROL 2), cyclin-dependent protein kinase/ kinase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G48750.1); similar to cdc2MsE [Medicago sativa] (GB:CAA65981.1); similar to Os10g0580300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065512.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.727232783620297 7.78399641296701 1.06950914965894e-05 0.000287660750530488 11.8802719193484 16.2528797055146 0.727232783620297 0.0802323729938315 AT5G65660_at 8.06489194867408 8.25931786000573 8.97682508385514 9.27291004163538 9.52148086309835 9.53257363848856 7.9658572105089 8.49226710622533 9.09024017503415 9.0306020748382 9.93869268385634 9.57175852136912 9.10855067904775 9.31101403980003 9.52063117372179 9.42284412634182 9.46141836402564 9.6684990296555 8.91100545841753 0.130618785115405 0.119576298640171 0.123022269328777 0.119327056491347 0.12192382239284 0.116919911989431 0.127322368166114 0.123381999035966 0.132454345398361 0.121424132607476 0.123210975266865 0.122277825896147 0.119349472541811 0.123657434691349 0.119677327527386 0.119485893897007 0.127529600520717 0.120023192742874 0.126070234054728 5 5 - 26262723 26263423 26263037.636 26262475 26263605 - gene protein_coding_gene TRUE TRUE AT5G65660.1 hydroxyproline-rich glycoprotein family protein similar to putative AFG1-like ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAO20064.1) 0.810087024939905 7.77559127675452 1.08010956726927e-05 0.000290331787486395 11.8707758326902 18.0162864590567 0.810087024939905 0.109817899693433 AT5G55230_at 9.06223970852876 9.0767172249321 9.10519315472357 9.19551170852211 9.84261900114173 9.74043613284263 8.82145812504364 8.97031956901085 9.34207142703738 9.34851892116122 10.4861022100794 10.4825956229040 10.0574546027758 10.1687246599712 10.4454798823845 9.67873802977173 9.58881506636236 10.1397658401704 9.33244125949935 0.0879641613936967 0.0882865623900634 0.0883409998003012 0.095873864571808 0.0892824038058798 0.0886022086657551 0.0952688840666305 0.088061355623659 0.095981249163443 0.094795186810688 0.0879271568158595 0.0881603553820493 0.089798440509738 0.0897379997131815 0.0880548024526024 0.0882239810338745 0.0882258774414922 0.089664610298776 0.092036845628784 5 5|0 +|/ 22421697 22422373 22422092.8 22419254 22422718 + gene protein_coding_gene TRUE TRUE AT5G55230.1 ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT4G26760.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to microtubule-associated protein MAP65-1c [Nicotiana tabacum] (GB:CAC17796.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1; (InterPro:IPR007145) 0.63910264791589 7.77383043652302 1.08234465099425e-05 0.000290752318925533 11.8687852900182 18.9627968406940 0.63910264791589 0.0350272676046656 AT5G63460_at 4.58948853354705 4.71626277677162 5.46158910805768 5.87106434091494 5.95056273025057 6.31786211193878 3.84583346043626 4.53084046735974 4.43173737347954 4.72343557901912 4.61756538537234 4.89093668809084 5.30688003428234 5.06811263254817 4.82217024660502 5.16448194546614 4.96415670024014 4.80224115891879 4.3969420977997 0.288778191946587 0.297361087714258 0.297235259776132 0.301887311829758 0.288894458465602 0.303924311542231 0.299438663456799 0.288778191946587 0.307305313041814 0.302216938805442 0.301522765906284 0.288778191946587 0.288778191946587 0.288778191946587 0.30823966542095 0.288778191946587 0.322681330377869 0.288778191946587 0.292301452484564 5 5|0 -|/ 25431088 25432573 25431969.2 25430594 25432735 - gene protein_coding_gene TRUE TRUE AT5G63460.1|AT5G63460.2 SAP domain-containing protein similar to hypothetical protein Haso02002276 [Haemophilus somnus 2336] (GB:ZP_00204600.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034) 0.958429839384755 7.77003939510612 1.08717369509674e-05 0.000291868718664838 11.8644983490467 9.8964078323462 0.958429839384755 0.153608325389321 AT5G64270_at 9.73975506561079 9.93814889060347 10.5822997826179 10.4882739362951 10.5749648593986 10.501151432808 9.5611678849415 9.73830903745889 9.338021844914 9.48344242088505 10.1318379155107 10.0066666270430 10.0934878239390 9.8135764905193 9.9647567594334 10.2464407551240 10.0054965318382 9.96077616005991 9.66844767489897 0.0918401452915661 0.0892923159614512 0.0941920645896028 0.103008555493244 0.0903284415878251 0.100720891768822 0.090013051780132 0.0924761842302796 0.104863815999318 0.0955721435471937 0.0922246140455435 0.0892923159614512 0.0896743397205774 0.0937003345763297 0.0947010856896505 0.0912795209382596 0.107454456900593 0.101943361280385 0.096017958668987 5 5 + 25727349 25727778 25727534.727 25723885 25728151 + gene protein_coding_gene TRUE TRUE AT5G64270.1 splicing factor, putative similar to PDF2 (PROTEIN PHOSPHATASE 2A SUBUNIT A3), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT1G13320.1); similar to RCN1 (ROOTS CURL IN NPA), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT1G25490.1); similar to U2 small nuclear ribonucleoprotein, putative [Aedes aegypti] (GB:EAT45112.1); similar to PREDICTED: splicing factor 3b, subunit 1 [Pan troglodytes] (GB:XP_516006.2); similar to PREDICTED: similar to CG2807-PA isoform 1 [Apis mellifera] (GB:XP_623732.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.661784926246824 7.76817039015095 1.08956299891123e-05 0.000292329155738536 11.8623841808448 19.9027674594665 0.661784926246824 0.0504620929167263 AT5G62930_at 5.551489398824 6.5289427694177 6.41648839359975 7.029907302359 7.1872962375505 6.88896924108345 4.99541468299514 5.59254813150422 5.6785533225985 5.43653741831926 6.92330183435981 7.09534620260852 6.80230856598474 6.90481509622252 6.92543586003629 6.97473917242109 6.62832997269666 6.6443054588595 5.54201023626963 0.236262086158645 0.241297862644707 0.251156144100144 0.256913475675313 0.239458180566935 0.245936755343116 0.251131052453609 0.241104176055936 0.253130878150617 0.237960150287297 0.248041967959779 0.236262086158645 0.237455934873356 0.239027897027024 0.248160738036729 0.245133982856597 0.254379050776517 0.243532971777877 0.236262086158645 5 5|0 +|/ 25272738 25273518 25273059.6 25272114 25273843 + gene protein_coding_gene TRUE TRUE AT5G62930.1 GDSL-motif lipase/hydrolase family protein similar to carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT5G45920.1); similar to putative esterase [Oryza sativa (japonica cultivar-group)] (GB:AAK13160.1); similar to Os10g0476700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064851.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 1.26176116298288 7.7631934616312 1.09595311434841e-05 0.000293680154671826 11.8567522156295 12.4812269010639 1.26176116298288 0.230706285453654 AT5G43450_at 8.77849907747709 9.29620844812021 10.2909799158234 10.2845228047575 10.7781456676763 9.99402264869742 9.77308952377138 9.50037581623522 7.91439921685267 8.33619163892117 9.23454738699408 8.90230110062062 9.94286376198705 9.83799507132203 8.15985185819387 9.44738951114518 9.47015263966215 9.1719479116574 8.46681891277831 0.188855600444594 0.186250313800817 0.201355094731959 0.186476814837848 0.193845732433724 0.189540141015064 0.194309563354684 0.189081832654530 0.204085915159782 0.193052671898962 0.198126764348462 0.191291070183537 0.183295320971208 0.190801276377062 0.219905151564825 0.183087052660677 0.212104897413744 0.195766338338141 0.189386430078247 5 0|5 /|- 17474591 17475138 17474791.8 17474359 17476025 - gene protein_coding_gene TRUE TRUE AT5G43450.1 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43440.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.01580955425905 7.76061347287932 1.09928160068524e-05 0.000294302080715186 11.8538314047023 18.5919893601774 1.01580955425905 0.16931843429612 AT5G20040_at 4.67792974196156 4.95156701265371 5.5404201323964 5.80442170454347 6.07740718384453 5.61337580812604 5.0001621601628 5.17201467717784 4.26381721173768 5.00891229847081 5.29858201471184 5.60249836647885 5.56091692847617 5.45909557266978 6.00230807070971 5.32144455388157 5.30689652874284 5.59606483482741 4.890849206355 0.202347257212986 0.196379514456313 0.20560996956586 0.196379514456313 0.204443734755384 0.206717957683959 0.198270511620038 0.198190605653081 0.227425797361653 0.196751740544308 0.207824078330942 0.196379514456313 0.201230777288991 0.203175138246678 0.196927505348122 0.200509962001844 0.21124837305335 0.201519102398565 0.197032588367069 5 5|0 -|/ 6768005 6769498 6768901.125 6767799 6771172 - gene protein_coding_gene TRUE TRUE AT5G20040.1|AT5G20040.2 ATIPT9 (Arabidopsis thaliana isopentenyltransferase 9); ATP binding / tRNA isopentenyltransferase Encodes tRNA isopentenyltransferase AtIPT9. similar to ATIPT1 (ISOPENTENYLTRANSFERASE 1), adenylate dimethylallyltransferase [Arabidopsis thaliana] (TAIR:AT1G68460.1); similar to prokaryotic tRNA isopentenyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAE47453.1); similar to Os06g0729800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058651.1); similar to putative tRNA isopentenyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD62118.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) 0.802885381264868 7.76034268383606 1.09963158254561e-05 0.000294302080715186 11.8535247940124 10.474496684775 0.802885381264868 0.107993957194120 AT5G48240_at 4.13507657096973 4.69995512023804 6.04050695611006 5.31765886770854 5.15448008150679 5.09553874896146 3.66461607131031 3.53530798258892 2.07447487792809 3.01505845214369 3.29051484010206 3.49651198015039 2.83537349716258 3.38444940694012 3.90690739915731 3.45734292414229 2.98657090696829 3.44871376211967 3.24629042534983 0.236271793551182 0.242561553332114 0.235672162256334 0.241235651394269 0.241316064318000 0.257404060460589 0.239639291917169 0.249927273576933 0.240881108996234 0.235552270858032 0.241137076806566 0.235552270858032 0.238941665352701 0.252744971009969 0.239615958163695 0.235552270858032 0.235552270858032 0.235552270858032 0.235552270858032 5 0|5 /|+ 19577535 19578333 19577974 19576469 19578480 + gene protein_coding_gene TRUE TRUE AT5G48240.1 similar to Os11g0266000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067664.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58467.1); contains InterPro domain Protein of unknown function DUF1665; (InterPro:IPR012459) 0.982748699206964 7.75676042715382 1.10427281825434e-05 0.000295361924868366 11.8494677632928 7.77009555395758 0.982748699206964 0.160651389397005 AT5G20060_at 7.99214978118766 8.084308519448 8.24034378441401 7.90764222966155 8.69230290559325 8.55340132511674 8.02124239075914 7.73929906827299 7.72622916571225 8.10564320803046 9.09915336626226 9.55118194652579 8.7065441812178 8.92813689911942 9.17141312399221 8.83515272792419 8.52602522860874 8.82218761222627 7.8450111951405 0.118200638744869 0.117074321527598 0.120757161328099 0.116212457142114 0.112138830094959 0.114509023106511 0.115584236484258 0.112138830094959 0.127897335713786 0.112138830094959 0.123306076536905 0.118863387763575 0.114344832567946 0.116003237200325 0.116580114858951 0.113788472198564 0.123298552147801 0.118143964198431 0.132348562862775 5 5|0 +|/ 6777393 6779409 6778770 6776169 6779616 + gene protein_coding_gene TRUE TRUE AT5G20060.1|AT5G20060.2|AT5G20060.3 phospholipase/carboxylesterase family protein|carboxylic ester hydrolase similar to phospholipase/carboxylesterase family protein [Arabidopsis thaliana] (TAIR:AT1G52700.1); similar to putative lysophospholipase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAB62566.1); contains InterPro domain Phospholipase/Carboxylesterase; (InterPro:IPR003140) 0.72592624202648 7.75483002979243 1.10678264196561e-05 0.000295850720890128 11.8472808337948 16.5774707049045 0.72592624202648 0.0807943361071674 AT5G17210_at 2.53768341320134 2.08853602477219 2.85921782582532 2.72486879054983 2.92899849827241 3.25297005320524 2.42203007754154 2.20319749092657 1.71409919973252 1.86178263864947 2.92914937623065 2.82961694184614 2.95898628133914 2.54126587676635 2.90193249429951 2.68853980400258 2.97082122202724 2.65890128348446 1.97685195184191 0.211890133659906 0.210159111902273 0.207434974130697 0.211474208319526 0.21260835202721 0.214084430435414 0.213724991140867 0.213793992806457 0.215964744703539 0.212726220267626 0.209579829625605 0.212325579975205 0.207250073278816 0.210983842248432 0.214502285426639 0.207250073278816 0.217383879663853 0.210486100706576 0.217463319759175 5 5|0 +|/ 5656571 5657886 5657556 5656385 5658149 + gene protein_coding_gene TRUE TRUE AT5G17210.1|AT5G17210.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13380.1); similar to unknown protein [Saussurea involucrata] (GB:ABC68264.1); similar to Os06g0114700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056606.1); similar to Os05g0434800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055640.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61065.1); similar to unknown protein [Saussurea involucrata] (GB:ABC68264.1); similar to Os06g0114700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056606.1); similar to Os05g0434800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055640.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606) 0.793821218472166 7.74184186328733 1.12383029224135e-05 0.000300049152725906 11.8325541385118 4.95759423349054 0.793821218472166 0.105638257989398 AT5G67600_at 9.93627702063284 10.193992305811 11.267979309827 11.3697441338753 10.9207208394440 10.7633577879585 10.4703302904579 10.6528598405705 10.4814983254422 10.218567224637 11.1256130718739 11.2981356406087 10.5423799986979 10.6464557200791 11.1770838949277 10.9385978721733 10.5420394522618 10.9625538100783 10.2053692513539 0.0716616383326619 0.0696647779657852 0.0708439629714005 0.0713665305804047 0.0702930219723599 0.0773574299799138 0.0723236364458033 0.0716871837792357 0.0740781481742797 0.0723489138302197 0.0737699010615993 0.0698577846585035 0.0727144502505834 0.079008409740675 0.0710079986242729 0.0696647779657852 0.0727596383882239 0.0736206635836286 0.0732237528671611 5 5|0 -|/ 26976980 26977419 26977221.111 26976795 26977549 - gene protein_coding_gene TRUE TRUE AT5G67600.1 similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G49840.1); similar to XYPPX repeat [Medicago truncatula] (GB:ABE79588.1); contains InterPro domain XYPPX repeat; (InterPro:IPR006031) 0.684690742758983 7.74180949639036 1.12387312797515e-05 0.000300049152725906 11.8325174119016 21.2998672076048 0.684690742758983 0.0635498136317436 AT5G23290_at 6.29878978762524 6.938682746151 6.89132358531736 7.1870403917699 7.66400886446688 6.74682160463416 5.89358035391282 5.8798847326377 5.12298969696669 4.79675208450321 6.69371943897019 7.07078232232996 6.00482938069915 6.33795274498272 6.57914122471367 5.8759422949398 5.5149051854976 5.98752591100903 4.66842809677079 0.270039107835265 0.266506270223273 0.270528117876463 0.271277053612128 0.266005924616631 0.289934178090602 0.265696292546332 0.266238772407337 0.274459253932973 0.283897859676333 0.265696292546332 0.265909078509679 0.267218256814400 0.274919025631088 0.271554074529152 0.265696292546332 0.275578891811770 0.278646122741563 0.277010743946235 5 5|0 +|/ 7846147 7847403 7846602.625 7846084 7847646 + gene protein_coding_gene TRUE TRUE AT5G23290.1 c-myc binding protein, putative / prefoldin, putative Identical to Probable prefoldin subunit 5 [Arabidopsis Thaliana] (GB:P57742); similar to putative c-myc binding protein [Oryza sativa] (GB:AAL31068.1); contains InterPro domain Prefoldin alpha subunit; (InterPro:IPR011599); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Prefoldin alpha-like; (InterPro:IPR004127) 1.13247036330563 7.73292400556041 1.13569950301531e-05 0.000303019943444634 11.8224299473436 12.2479280611342 1.13247036330563 0.200200497664186 AT5G08530_at 10.7518013023665 10.8669785693805 11.4499687975030 11.5496032257875 11.3201322547727 11.3805196555174 11.0092435108499 10.9757716017137 10.4596096437944 10.5881844012532 11.2461022243097 11.1940717723558 11.0532593474045 11.1239908817444 11.2352628127080 11.1746804643970 11.2907596041847 11.2214090462379 10.3314141839102 0.0789243210501319 0.0792998013473128 0.0847500924486144 0.0816682202162462 0.0865986158924329 0.0838097568098986 0.0840433980014496 0.0789243210501319 0.09052025242336 0.086192749339079 0.0789243210501319 0.0789243210501319 0.081454102420503 0.0799077344626788 0.0804312745050814 0.0789243210501319 0.0808377621150977 0.0854940358512728 0.088462303163168 5 5 - 2759853 2760398 2760136.273 2759318 2761876 - gene protein_coding_gene TRUE TRUE AT5G08530.1 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial, putative similar to NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit (ISS) [Ostreococcus tauri] (GB:CAL57468.1); similar to NADH:ubiquinone oxidoreductase 51 kD subunit [Chlamydomonas reinhardtii] (GB:AAQ63696.1); similar to NADH dehydrogenase [Solanum tuberosum] (GB:CAA58823.1); contains InterPro domain NADH-quinone oxidoreductase, F subunit; (InterPro:IPR011537); contains InterPro domain Respiratory-chain NADH dehydrogenase, 51 kDa subunit; (InterPro:IPR001949); contains InterPro domain Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; (InterPro:IPR011538) 0.628406590082986 7.72839120611433 1.14178424453949e-05 0.000304456076956272 11.8172800410564 21.9890914124799 0.628406590082986 0.0289368040580857 AT5G53020_at 6.14280822451173 6.38160395335492 7.15343830063132 7.03753565891111 7.63946914446717 7.2078489627792 6.93217485856104 7.01775227865986 6.60548908799336 7.30754370293718 8.13738171755626 7.9634301947105 8.38527319084121 8.33458840797905 7.25475165937958 8.16730670687419 7.56835805358479 8.08805366872012 7.50459210124354 0.162859268936369 0.150563603513709 0.153807373288513 0.156158232791400 0.157964778569032 0.158051197651896 0.159091787543120 0.154921562463881 0.172253030452766 0.167445792080165 0.151070671968515 0.153685387632975 0.153420878747911 0.152551631451677 0.154710355947361 0.149879555160432 0.156689784338755 0.153629061199601 0.164630103938302 5 5 + 21518775 21519429 21519214.727 21517125 21519627 + gene protein_coding_gene TRUE TRUE AT5G53020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45900.1); similar to putative 200 kDa antigen p200 [Oryza sativa (japonica cultivar-group)] (GB:BAD88062.1); contains domain gb def: Emb|CAB82814.1 (PTHR21596:SF5); contains domain RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED (PTHR21596) 0.744586420244835 7.72733833997694 1.14320262278640e-05 0.000304646926922707 11.8160834540555 14.5023795464081 0.744586420244835 0.0889299442392489 AT5G36930_at 7.24631774510222 7.42056592078765 7.85704132486127 8.12645901172903 8.00852762712815 7.38542970860703 5.46671847591622 4.75569871093845 5.91055841557795 4.67752877376642 5.71923676635474 6.01922955811222 5.13905414319287 5.83531671110301 4.65477074492425 5.95698752616775 6.34740882560475 5.40450820895502 5.03494287296727 0.224029829559098 0.219847292754331 0.226484787033963 0.219847292754331 0.226366193373337 0.232369807853574 0.228834682227228 0.221741305687207 0.229375556824225 0.223800640087991 0.229275868729834 0.228957688931988 0.230583953171739 0.236051731876332 0.231311249864730 0.219847292754331 0.226138634508705 0.230683114040694 0.232203397210517 5 5|0 -|/ 14585382 14585812 14585657.222 14584881 14589845 - gene protein_coding_gene TRUE TRUE AT5G36930.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G17680.1); similar to TIR-NBS type disease resistance protein [Populus trichocarpa] (GB:ABF81459.1); similar to TIR-NBS disease resistance-like protein [Populus trichocarpa] (GB:ABB82027.1); similar to TIR-NBS disease resistance-like protein [Populus trichocarpa] (GB:ABB82031.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.02446328900492 7.72663220969395 1.14415495832454e-05 0.000304713425089678 11.8152808533930 12.4544651896283 1.02446328900492 0.172773085832953 AT5G37670_at 3.37273847825127 3.82753596908375 3.91643713241286 4.18192282974311 4.62710119701113 4.47912490996951 2.79435236026245 2.51925668665316 3.05425986281697 3.44284681315342 3.39636359193907 3.23415717466173 3.36595360288475 3.4923562158719 3.50565654509052 3.80519614816625 4.10873184412765 3.52115185490698 2.92829890174611 0.218458528685773 0.226365334651201 0.214400177172003 0.219952603787139 0.222189210289163 0.214533517883352 0.212058027596483 0.215582997208835 0.233184250373089 0.217309822679874 0.214436438719142 0.215245486987458 0.214852660923424 0.221828033213537 0.21383181958259 0.212058027596483 0.224019024944889 0.222779017351874 0.216354041038685 5 5 + 14986275 14986621 14986476.909 14986221 14986739 + gene protein_coding_gene TRUE TRUE AT5G37670.1 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) similar to 17.6 kDa class I heat shock protein (HSP17.6A-CI) [Arabidopsis thaliana] (TAIR:AT1G59860.1); similar to Os06g0253100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057300.1); similar to cytosolic class I small heat-shock protein HSP17.5 [Castanea sativa] (GB:CAA08908.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.792284828344384 7.71743266262174 1.15664067174378e-05 0.000307849546175649 11.8048185713853 7.06255756114587 0.792284828344384 0.105959495991732 AT5G61290_at 2.96635548001502 3.40642174596813 3.59473327274836 4.36919429763757 4.0323507237656 4.41201384511238 3.47748280557011 3.41550613865216 2.21596322701651 2.21818517166056 3.47323959039322 3.60038702032443 3.22182064423053 3.97817725065344 2.70962523878686 3.5510261959839 3.60704769469195 3.58153791423224 2.29123930617812 0.231308454828528 0.219382965106960 0.231946633783229 0.228632860742784 0.228972781324728 0.230281763790890 0.222485744059019 0.224524122531538 0.244490369668281 0.229585269941170 0.218007002679765 0.218007002679765 0.229662338585035 0.218725424502461 0.221795231013958 0.218007002679765 0.218007002679765 0.231059257255769 0.240250297269796 5 5|0 +|/ 24666937 24667848 24667512.444 24665784 24668041 + gene protein_coding_gene TRUE TRUE AT5G61290.1 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT5G07800.1); similar to putative flavin-containing monooxygenase FMO-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD89476.1); similar to Os07g0112000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058741.1); similar to Os07g0112100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058742.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 1.00459664215415 7.71546765885291 1.15932661267157e-05 0.000308375128387171 11.8025824272061 6.5628340863239 1.00459664215415 0.167910597415934 AT5G24360_at 4.84645445122536 5.61046590637341 5.65573918529576 6.30937134006362 6.58811630407155 6.46379092565047 5.25011219332321 4.74343081671261 4.77846428076012 4.90490913295634 5.87134263708446 6.27303134893022 5.57587571079733 6.5616797765302 5.81910011688053 5.76090034654017 5.71276266154842 5.86917785467241 4.85481431848545 0.227264595621725 0.227264595621725 0.227264595621725 0.227264595621725 0.246954174379018 0.242116407359764 0.249270795917488 0.242467291608390 0.245358853148473 0.231508207073333 0.227264595621725 0.239060128477678 0.229821041936188 0.233308148208953 0.229107949198399 0.227264595621725 0.256284527283001 0.238875900347904 0.227728051198553 5 5 + 8319242 8319805 8319513.818 8316446 8319984 + gene protein_coding_gene TRUE TRUE AT5G24360.1 protein kinase family protein / Ire1 homolog-1 (IRE1-1) similar to IRE1A (Yeast endoribonuclease/protein kinase IRE1-like gene), kinase [Arabidopsis thaliana] (TAIR:AT2G17520.1); similar to Protein kinase; PUG; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] (GB:ABE78057.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Ribonuclease 2-5A; (InterPro:IPR010513); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Quinoprotein amine dehydrogenase, beta chain-like; (InterPro:IPR011044); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PUG; (InterPro:IPR006567) 1.11302991304201 7.71338986944559 1.16217404520022e-05 0.000308942995735525 11.8002173895904 11.0717083323513 1.11302991304201 0.196028338966748 AT5G59340_at 1.87256672353067 1.97724348790501 2.85287079938104 3.08050753386605 3.74517448294149 3.51261192941561 3.3945127433954 3.67959894635471 2.08480644082538 3.06175123920465 2.67230380473129 2.96960468255939 3.73822461722619 3.83331891903859 2.47215931602782 4.60809377811637 3.4640337681238 3.7145085391575 2.58378419331900 0.268917875577265 0.279836935173495 0.268008953131081 0.263719973411827 0.260702721803996 0.276267222860621 0.275733709307681 0.260702721803996 0.274476617850361 0.262874397795746 0.260702721803996 0.269870355904766 0.268769158117127 0.271067309800931 0.268982647445102 0.275449064554135 0.297020742967547 0.265022366370154 0.270771798659647 5 5 - 23950653 23951723 23951012.182 23950630 23951916 - gene protein_coding_gene TRUE TRUE AT5G59340.1 WOX2 (WUSCHEL-related homeobox 2); transcription factor Arabidopsis thaliana clone 1 WOX2 protein mRNA Identical to WUSCHEL-related homeobox 2 (WOX2) [Arabidopsis Thaliana] (GB:Q6X7K1;GB:Q6X7K2;GB:Q9FIE5); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G18010.1); similar to homeodomain transcription factor [Picea abies] (GB:CAL18267.1); similar to Os01g0840300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044759.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) 0.712030507388771 7.70576023665746 1.17269474390860e-05 0.000311548716622605 11.7915281742581 6.01979160713489 0.712030507388771 0.0770307485874797 AT5G65460_at 5.36259705181346 5.253062068163 6.55160968786418 6.48005315828662 7.23256049409284 6.73564380310586 7.05428535241861 6.75647423759135 6.68365063770809 7.01129762746762 7.9855006071043 7.9055497310142 7.77675080140059 8.01719631256712 7.439543294379 7.75756963541061 7.70614628260596 7.88173075703363 6.97298679526626 0.166197453722320 0.161066065514576 0.163396650127729 0.154633163230847 0.148675882851919 0.160329159364175 0.15786625458378 0.148415553867337 0.154449775981241 0.154207693076962 0.147484250592404 0.153247473677007 0.150273455195470 0.155003437811681 0.147315332353826 0.151157635707034 0.162360017233216 0.146510137752681 0.15435082710428 5 5 - 26179102 26179664 26179347.455 26179057 26186227 - gene protein_coding_gene TRUE TRUE AT5G65460.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G10470.2); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.7813994246081 7.70365268903113 1.17561898657868e-05 0.000312134338653852 11.7891266032215 13.7773157889187 0.7813994246081 0.102779888898999 AT5G54855_at 9.61370601655025 9.53887840913887 10.0299152083238 10.0081675870238 10.3374102714575 10.2799640401408 9.72656035322693 9.6189635246109 8.97086481537106 9.60573234814377 10.2000745624181 10.1680353418261 10.255510996586 10.1866832168844 9.93377083487535 10.0960741983843 10.0516175745121 10.1471621206379 9.69895211545268 0.0913459391900321 0.0913535716913079 0.0952259376292684 0.092272385473041 0.0910310121036087 0.0955341071092471 0.0929532634555555 0.0916731140701756 0.126846979629032 0.0974648541514626 0.0919304682591134 0.091487186928735 0.093585591287946 0.097166191588333 0.091700302539939 0.0903498586594818 0.0923021648289304 0.0976856849522811 0.09576732108211 5 5|0 +|/ 22300157 22301442 22300911.5 22299993 22301613 + gene protein_coding_gene TRUE TRUE AT5G54855.1 pollen Ole e 1 allergen and extensin family protein similar to Os02g0317800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046675.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) 0.622010106815556 7.69605902018956 1.18622073092246e-05 0.000314756422041927 11.7804687553383 19.6717202756865 0.622010106815556 0.0250476984640123 AT5G67420_at 8.67421818620404 8.856707520812 9.55324822418367 9.45756314999195 10.4639907091684 9.90418334705063 9.062117531593 8.81619995493593 9.012727626384 8.94779244493053 9.67937272785057 9.62513020997249 9.92945308462721 9.65959726951156 9.30930535649557 9.94338457262181 9.63761393078343 9.42040873674357 9.12789120727574 0.113338693342371 0.108428055208866 0.110804931105361 0.112040538376373 0.108653306425715 0.112947893348774 0.116606381727947 0.118163032659406 0.120327355803364 0.114413155254203 0.112457242933382 0.109663621873713 0.109800627360637 0.108416232963949 0.109003118691224 0.107892020886628 0.118611082369921 0.113356415195129 0.115076257888005 5 5 - 26921860 26922342 26922067.455 26921515 26923252 - gene protein_coding_gene TRUE TRUE AT5G67420.1 LOB domain protein 37 / lateral organ boundaries domain protein 37 (LBD37) Identical to LOB domain-containing protein 37 (LBD37) [Arabidopsis Thaliana] (GB:Q9FN11); similar to LOB domain protein 38 / lateral organ boundaries domain protein 38 (LBD38) [Arabidopsis thaliana] (TAIR:AT3G49940.1); similar to lateral organ boundaries domain protein [Caragana korshinskii] (GB:ABG90382.1); contains InterPro domain Lateral organ boundaries, LOB; (InterPro:IPR004883) 0.806749184545727 7.68912977478519 1.19598494924355e-05 0.000317016803652757 11.7725618980625 18.6885304091287 0.806749184545727 0.111659520958914 AT5G58575_at 5.50990552167462 5.9117785783842 5.70725490747778 6.14200057338294 7.09094715927702 6.94578229164042 4.50050807623467 5.06933631057204 4.98733708200327 4.80114884307264 5.37299329610839 5.5651217424369 5.04864695443183 5.69559048251052 5.42397762320382 5.76203776016671 5.03849764480779 5.37026996885001 4.6205567061543 0.277426982620184 0.263396601783309 0.283709372825857 0.269877450892362 0.270262578725052 0.267350017246714 0.279716960900151 0.259558619219076 0.267460588934137 0.267106070856884 0.260195174810503 0.264630839567634 0.274968664289157 0.264760223490146 0.263165247751168 0.260068269510155 0.270509829470954 0.259931574762616 0.27715312538055 5 5 + 23691827 23692339 23692126.333 23691226 23692724 + gene protein_coding_gene TRUE TRUE AT5G58575.1 similar to hypothetical protein [Platanus x acerifolia] (GB:CAL07976.1); contains InterPro domain Sgf11, transcriptional regulation; (InterPro:IPR013246) 0.91512091744129 7.68897660203677 1.19620176754459e-05 0.000317016803652757 11.7723870443521 10.9660172495677 0.91512091744129 0.144284853594980 AT5G16140_at 5.20101832169263 5.24097155229232 6.44339682103605 5.77048686808180 6.87719066877268 6.27644111422792 6.11048738989423 5.25332485349356 4.05410854590006 5.04066172435893 6.16419642757313 6.8129747642984 5.8353633514688 6.05812943822444 6.97154890025824 6.68915285924942 6.68444379130312 5.88455334740354 5.61632549852661 0.233901875138684 0.218491932135905 0.233351098424048 0.225206060585941 0.231255688661423 0.240448711508745 0.219987251197213 0.226122247115355 0.263210171505786 0.232750548662068 0.218491932135905 0.219096957589842 0.218491932135905 0.218601640999699 0.226647977270147 0.227336890305257 0.229196592518701 0.225601485577459 0.224382736949591 5 5|0 -|/ 5270367 5271172 5270875 5270177 5271924 - gene protein_coding_gene TRUE TRUE AT5G16140.1|AT5G16140.2 peptidyl-tRNA hydrolase family protein similar to peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G38290.1); similar to Peptidyl-tRNA hydrolase [Medicago truncatula] (GB:ABE85649.1); contains InterPro domain Peptidyl-tRNA hydrolase; (InterPro:IPR001328) 1.18713755453181 7.68800576416038 1.19757699011341e-05 0.000317187384641583 11.7712787173952 11.5422866734702 1.18713755453181 0.215453522545807 AT5G55070_at 9.16456834902692 9.54782238356858 10.0549788914773 10.3216811514453 9.78435679127664 9.40503625289598 9.54131965426854 9.63648889847865 8.39180211788353 8.83491661131864 9.59397551587267 10.1210689776847 9.6265769579897 9.71001371915944 9.6570246894482 9.64596644770325 9.77228744656174 9.82454366503775 8.53869517180524 0.119338889141874 0.115376718642213 0.119593885171446 0.115741904571821 0.115091697790117 0.118886658595316 0.121627973662641 0.118587667697137 0.143761039257522 0.123328619429708 0.126598445050524 0.115752951605529 0.119218235570941 0.11973874386622 0.115091697790117 0.116170730137750 0.130446714085716 0.119107687278680 0.128335154868474 5 5|0 +|/ 22366778 22367610 22367358.714 22364437 22368043 + gene protein_coding_gene TRUE TRUE AT5G55070.1 2-oxoacid dehydrogenase family protein similar to 2-oxoacid dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G26910.2); similar to Os04g0394200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052652.1); similar to putative 2-oxoglutarate dehydrogenase E2 subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD22992.1); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site; (InterPro:IPR003016); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Dihydrolipoamide succinyltransferase; (InterPro:IPR006255); contains InterPro domain Single hybrid motif; (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078) 0.787212163767257 7.68431240900261 1.20282436199440e-05 0.000318210511730266 11.7670611913383 18.8482332854387 0.787212163767257 0.105400804632205 AT5G23110_at 6.82617792818686 6.67923495162367 7.13171533043268 7.45995323776486 7.45512525070217 7.14979974813343 6.06048038894521 6.1452074557036 6.34856562467218 6.64399203040457 7.3396627907652 7.34231665670634 7.63068292865845 7.13394274180082 6.51808516682707 7.22098666045041 7.07343137327524 6.82660043107273 6.68010538611648 0.171081138659622 0.168311001038123 0.167118826604579 0.161968545476163 0.169493539014903 0.166344075131195 0.172282707797263 0.171969772773976 0.173933422103505 0.166997465687184 0.176959377308821 0.161968545476163 0.164795330147492 0.185096714852656 0.174216590773519 0.161968545476163 0.180727682481323 0.179165862989735 0.164486171477817 5 5|0 +|/ 7774634 7775483 7774963.8 7758310 7775674 + gene protein_coding_gene TRUE TRUE AT5G23110.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G73950.1); similar to Os04g0675200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054245.1); similar to H0103C06.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86102.1); similar to OSJNBa0018M05.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE03243.2); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.724766228636788 7.68425383704351 1.20290777836105e-05 0.000318210511730266 11.7669942923775 13.7100957568160 0.724766228636788 0.0829462215351368 AT5G01750_at 12.4799554892206 12.5308824386529 13.1239162276501 13.0424665437924 13.2451877751638 13.1173035715173 12.7626689758463 12.6052753822068 12.0567008242279 12.1977432779654 12.7901809256089 12.7157382857201 12.8711189352425 12.7150436759483 12.6828653122183 12.8402812966724 13.0434570956124 12.9682170437061 12.0238457157397 0.0572873048033869 0.0570042808443639 0.0570042808443639 0.0592772141998901 0.0630211552920157 0.0590587402629982 0.0590364668318815 0.058476270559363 0.0628392088590494 0.0599750587573042 0.0570042808443639 0.0570374232155351 0.0589482351095316 0.0570042808443639 0.0584267141206354 0.0575078267804724 0.0622746920269818 0.0588097263256224 0.0612187246911926 5 5 + 290035 290651 290324.818 289762 291323 + gene protein_coding_gene TRUE TRUE AT5G01750.1|AT5G01750.2 Identical to Protein At5g01750 [Arabidopsis Thaliana] (GB:Q9LZX1;GB:Q8LEK9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11740.1); similar to Protein of unknown function DUF567 [Medicago truncatula] (GB:ABE88870.1); contains InterPro domain Protein of unknown function DUF567; (InterPro:IPR007612)|Identical to Protein At5g01750 [Arabidopsis Thaliana] (GB:Q9LZX1;GB:Q8LEK9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11740.1); similar to Protein of unknown function DUF567 [Medicago truncatula] (GB:ABE88873.1); contains InterPro domain Protein of unknown function DUF567; (InterPro:IPR007612) 0.636561253373044 7.68275424726698 1.20504557559515e-05 0.000318581657052458 11.7652813581665 25.324020097499 0.636561253373044 0.0388332190223524 AT5G25270_at 6.33305623121614 6.22808557069818 7.49156985440526 7.1160590440699 7.56751328646033 6.6852288796264 6.31709959283055 5.80705431756826 6.47118224818681 6.29029870510284 8.0273189328451 7.62476076830314 7.63136768729323 7.7140086729361 7.27402214095642 7.9969438402107 7.61495138471948 6.85260420926309 6.6655772927498 0.224603352609526 0.225019321116066 0.224810624669134 0.229637252877046 0.220062249514660 0.225614440444843 0.224824890490836 0.232073799104798 0.229953909037416 0.223016215958094 0.222907034061456 0.219579740410960 0.223530119661546 0.229402587466695 0.223110999976444 0.2211698921911 0.234931953229355 0.219579740410960 0.232840783725910 5 5 - 8758316 8758969 8758637.455 8757547 8762005 - gene protein_coding_gene TRUE TRUE AT5G25270.1 similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT5G11080.1); similar to AT5g42220/K5J14_2 [Medicago truncatula] (GB:ABE80944.1) 1.08003998030747 7.680471856382 1.20830719986377e-05 0.000319249278638241 11.7626736925243 13.7270499903989 1.08003998030747 0.188827870281458 AT5G42300_at 11.8511309829159 11.8493127521358 12.6132197069593 12.6528268580423 12.4738317575398 12.2545929908862 11.7897613961246 11.8631469041495 11.9532146552123 11.9234918510634 12.5475753296046 12.3909642185183 12.5278552289860 12.5559945495644 12.2374123327765 12.6027811607929 12.6618611672354 12.5295975433008 11.7977021037217 0.0682583564120159 0.0641227052807512 0.0662410578044981 0.0683990290770669 0.0645287791551117 0.0681836384670884 0.0672867816975457 0.0650756930111076 0.0705406432833891 0.0658472316513704 0.0678638239434653 0.0645135913897272 0.0639018318923542 0.0672847767338501 0.0657200791169702 0.064788349385194 0.0700231381352312 0.063371758543311 0.0650145746686786 5 5 - 16930839 16931032 16930922.364 16929561 16931158 - gene protein_coding_gene TRUE TRUE AT5G42300.1 ubiquitin family protein Identical to Ubiquitin-like protein 5 (UBL5) [Arabidopsis Thaliana] (GB:Q9FGZ9); similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT3G45180.1); similar to Os11g0145400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065730.1); similar to Ubiquitin [Medicago truncatula] (GB:ABE89730.1); similar to Os12g0143100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066134.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.63778273710353 7.66803559088217 1.22624733993315e-05 0.000323791965362992 11.7484531408449 24.3675902826008 0.63778273710353 0.0405934387875294 AT5G24110_at 2.18301611555258 2.44146901833699 4.22939742048423 4.70209937265948 2.74394506781917 2.59786670203040 0.343790937660621 0.775031670854778 2.07286810969773 1.50599429289040 1.24735617502795 2.06548743650499 1.14978299388042 0.830121364027417 1.36995858570804 0.760255922860951 0.775200819904267 1.11838791028879 1.29063940329113 0.220014861227935 0.209710836298014 0.218985175042394 0.210404321671305 0.207325286210284 0.209726201310947 0.211571976259121 0.217944449008684 0.218720353321278 0.224310425156539 0.236210856417053 0.21031981474816 0.209805464533986 0.208573144508188 0.209674153942737 0.217137836737551 0.234649790146328 0.220854974181294 0.207325286210284 5 5 - 8153419 8154159 8153676.455 8153118 8154712 - gene protein_coding_gene TRUE TRUE AT5G24110.1 WRKY30 (WRKY DNA-binding protein 30); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 30 (WRKY DNA-binding protein 30) (WRKY30) [Arabidopsis Thaliana] (GB:Q9FL62); similar to WRKY53 (WRKY DNA-binding protein 53), transcription factor [Arabidopsis thaliana] (TAIR:AT4G23810.1); similar to putative WRKY transcription factor 30 [Vitis aestivalis] (GB:AAR92477.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.836950918773006 7.66328530294385 1.23317565371232e-05 0.000325423207180293 11.7430159817080 3.89594512300067 0.836950918773006 0.122068262588535 AT5G64450_at 1.52689901879313 1.71911979968580 2.49579431471732 2.62073970235381 2.73829810425441 2.62841584289736 1.42162674821892 1.33681372514605 1.74592657305326 1.47641178150683 1.91446551811760 1.5369395722959 1.65061296606669 2.09778336440127 1.76252451863301 1.99974491722733 1.75133721650147 1.68556080746188 1.66208748232066 0.20890612056864 0.20728347556574 0.216257453215776 0.21238597742075 0.224494528688777 0.214998028853089 0.206936116200525 0.209054402079294 0.205757778092253 0.204498846896452 0.207923146330489 0.207500559935465 0.205383222753771 0.204080267037423 0.212940378612648 0.203818018090566 0.209713452054904 0.203726358517863 0.210899997497537 5 5|0 +|/ 25789198 25789953 25789625 25789175 25789987 + gene protein_coding_gene TRUE TRUE AT5G64450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) 0.645713166277987 7.65878402018917 1.23977979394943e-05 0.000326966970270726 11.7378611136257 3.77496993486588 0.645713166277987 0.0463797924168141 AT5G45820_at 9.87883370487572 9.9890371935721 10.9124591924958 10.9522253442369 11.2636060479393 10.9500220668690 11.0599963684428 11.1029274509397 10.5019246877822 10.7215571511842 11.6163372293713 11.4308478158760 11.4254113578406 11.5925632732197 11.2403671858919 11.7346452429002 11.3132787610344 11.3700169883077 10.7086477230108 0.089165141352822 0.0865834181227457 0.0926731653940108 0.0907419013250137 0.0886938290014895 0.096670593319412 0.087702588753441 0.0886478417881446 0.0983761237267938 0.0882910549934876 0.0876712082118113 0.0865834181227457 0.0883199684678625 0.0880345009560191 0.0873656194831773 0.0865834181227457 0.0918437449990147 0.0894774314669119 0.0890978769774027 5 5 - 18604377 18604880 18604710.455 18604209 18605770 - gene protein_coding_gene TRUE TRUE AT5G45820.1 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. similar to CIPK10 (CBL-INTERACTING PROTEIN KINASE 10), kinase [Arabidopsis thaliana] (TAIR:AT5G58380.1); similar to CBL-interacting protein kinase 11 [Populus trichocarpa] (GB:ABJ91218.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.666634888953596 7.65459984436456 1.24595293007443e-05 0.00032839525688436 11.7330670220992 21.8183767557369 0.666634888953596 0.0584054098141414 AT5G56980_at 3.97289291353548 4.3016849062562 5.73433331856029 6.05800493367257 5.39755054051455 4.87073838559675 5.47577090405946 5.5148632036717 5.27184812236393 4.18711447950088 5.4525126632813 6.12869569737514 5.6292984816501 5.68742203781221 5.44823440743825 6.44141435694279 6.13601175000315 4.99275441556177 4.8550718949508 0.249282000119144 0.250207026482390 0.246927097063819 0.254847292933868 0.24611594336802 0.248490685440377 0.251220436587052 0.245844776960948 0.251822720418237 0.2494268060217 0.24358644964114 0.243312286494785 0.246272172056049 0.242156482035768 0.242156482035768 0.247743235414697 0.24407754224314 0.256523437063665 0.255146282287907 5 5 - 23073885 23074361 23074113.909 23073306 23074968 - gene protein_coding_gene TRUE TRUE AT5G56980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26130.1); similar to cDNA-5-encoded protein (GB:AAA50235.1) 0.833525978345775 7.65238392965635 1.24923561711963e-05 0.000328924449147072 11.7305271727213 10.4211737924984 0.833525978345775 0.121376196663072 AT5G15680_at 6.12747685301158 6.50099427557522 7.04331430608977 6.73348317804435 7.377541285591 6.94434363164615 6.21953171813744 6.15840156322344 5.56021593877835 6.05299236015306 6.55552969089184 6.93803122686807 6.85817476203943 6.6151216204318 6.2589900612592 6.60373946787314 7.07678371319405 6.70949396079801 5.96852757686918 0.195498293884477 0.198976712249121 0.200088474013590 0.203102635444700 0.195128729267901 0.199464075584058 0.196170124402786 0.202046896380656 0.216652631046655 0.214957108370135 0.210528014380881 0.192778261167514 0.200195952937024 0.202310210598552 0.215728480540827 0.195710345925385 0.205874114526523 0.212103700006413 0.204866625693666 5 5 - 5101250 5101755 5101500.545 5100987 5110796 - gene protein_coding_gene TRUE TRUE AT5G15680.1 binding similar to hypothetical protein [Cleome spinosa] (GB:ABD96931.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96836.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96932.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.80723696775424 7.65222056476887 1.24947799735503e-05 0.000328924449147072 11.7303399008397 12.9194166955080 0.80723696775424 0.113070757080647 AT5G12410_at 6.95112753654277 7.28896192304552 7.75264476702465 7.93009985171874 8.09834587739025 8.06232843024127 7.03822402382874 7.28002017153228 5.1385617051986 5.81995196885276 5.68951398576137 7.1213191417839 6.70608703184457 5.93415760304447 6.59636188626989 6.22784163082195 6.66806107011399 6.0344861265493 6.36052169420801 0.220983610990880 0.220983610990880 0.221693906209761 0.229143652092925 0.222955577844789 0.232321159079483 0.22718106811548 0.228035034130072 0.25175911574701 0.230494111311966 0.242080742967493 0.222675126465699 0.221778832642504 0.228266905779178 0.229850522373199 0.220983610990880 0.229022676735322 0.229829261157720 0.221040405248927 5 5|0 -|/ 4022179 4022668 4022413.2 4021816 4023989 - gene protein_coding_gene TRUE TRUE AT5G12410.1 THUMP domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47970.1); similar to Os11g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068115.1); similar to THUMP domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22531.1); contains InterPro domain THUMP; (InterPro:IPR004114) 0.710244043980147 7.64974548963292 1.25315641873924e-05 0.000329692614046129 11.7275021935237 13.6228392471373 0.710244043980147 0.0784273757294953 AT5G63410_at 8.58409842454236 8.90190323960501 9.42934138816008 9.34814994867332 9.82926216000162 9.48522887933373 8.79484308122877 8.57249337786766 8.9063649291836 8.5087026445107 9.61500841149113 9.64125212997924 9.35660355909843 9.28102337047168 9.0772130956259 9.37173524891078 9.03012327865024 9.41495486647836 8.60733310457007 0.148966522084356 0.139927609236078 0.146259296657458 0.150210878570921 0.136033219101173 0.150566744720675 0.136556446160939 0.13788150556758 0.159996359754464 0.148789838549296 0.140277154563831 0.134520030743771 0.143912230820865 0.13956512246106 0.154005054399090 0.134520030743771 0.143938597505363 0.140652100959025 0.137388130246618 5 5 - 25412418 25413323 25412773.455 25412210 25415379 - gene protein_coding_gene TRUE TRUE AT5G63410.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G14210.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78913.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.742008374449 7.64800852958632 1.25574484279411e-05 0.000330173254045883 11.7255102667232 18.1294764646814 0.742008374449 0.0908149983858614 AT5G20820_at 2.21632817492877 2.18585028420626 1.71431725063959 1.69859313893875 1.78794451929696 1.62404967031531 1.99350966771507 1.90822850919856 2.38057682685146 2.79888016400890 4.35378860635794 4.40456146603851 3.63320797972852 4.35148063209877 4.53767321870927 4.92201318819829 3.76968742417578 3.92239371794936 2.66831275285709 0.261778593227237 0.260959865537836 0.273439445051576 0.265269929701164 0.260959865537836 0.267043700341111 0.264136486234928 0.286811147390919 0.270789428192585 0.266538799099888 0.271162180725008 0.280437226847321 0.263313361575283 0.277585085884066 0.265939255721500 0.276294115479518 0.270125045496738 0.274304835162568 0.265165309105136 5 5 - 7046913 7047222 7047054.909 7046753 7047398 - gene protein_coding_gene TRUE TRUE AT5G20820.1 auxin-responsive protein-related similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G72430.1); similar to Os08g0452500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061954.1); similar to auxin-induced protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD36435.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.625587258518361 7.64574880724958 1.25912092958971e-05 0.00033086028626544 11.7229182510363 5.31748966543635 0.625587258518361 0.0325188763640148 AT5G65210_at 6.88105262706173 6.86053954894038 8.68675648030697 8.5189818615151 8.95698145269719 8.4115184891944 7.54428396989764 6.70955611501318 5.15750559139956 6.26103098811332 5.8892068875593 5.03529312400493 7.04420131460171 6.52847194276503 5.04867601082879 7.0380163710791 7.79167455166567 6.42587472955755 6.43346158135889 0.210517198532976 0.205310608188904 0.207143433184972 0.206213847437613 0.206229380809226 0.209883982348919 0.207035145339180 0.211470031558409 0.217759315673658 0.208049389517499 0.207848035330835 0.209997773505012 0.206216201333173 0.208123780388797 0.212158396565424 0.205043775129506 0.213967626700025 0.205043775129506 0.210913547673314 5 5|0 +|/ 26077255 26077947 26077528.1 26074849 26078330 + gene protein_coding_gene TRUE TRUE AT5G65210.1|AT5G65210.2|AT5G65210.3|AT5G65210.4|AT5G65210.5|AT5G65210.6 bZIP family transcription factor (TGA1)|DNA binding / calmodulin binding / transcription factor Identical to Transcription factor TGA1 (DNA-binding protein TGA1a-like protein) (AtbZIP47) (TGA1) [Arabidopsis Thaliana] (GB:Q39237;GB:Q8LBQ9;GB:Q9FJP4); similar to TGA4 (TGACG MOTIF-BINDING FACTOR 4), DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G10030.1); similar to 4D11_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67521.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 1.02210615929201 7.64482093270371 1.26051003553028e-05 0.000331024681805217 11.7218537385335 13.9716302781442 1.02210615929201 0.175022318306132 AT5G41970_at 7.76510563671735 7.84910963939148 8.6899285733296 8.54396758695795 8.37530913305523 8.27857758228368 7.78050373703329 7.72250176385285 7.02591618004446 7.44493596096098 7.48742452224132 7.93489026486537 8.07963833864286 7.82033036682865 8.31749364155706 8.05463427318612 8.13450249824034 7.6651634270862 7.64634948898184 0.144105556023579 0.150840431560258 0.145737499266865 0.150900814663336 0.148526612910351 0.156704161914246 0.150075465736566 0.15265217361395 0.172144028938486 0.146209867792956 0.146541223978273 0.146695909450133 0.144386569372276 0.145290202951000 0.144672621947473 0.145984928433324 0.151337548269414 0.149116871894141 0.152001431502821 5 5|0 +|/ 16809319 16810119 16809680.3 16808410 16810485 + gene protein_coding_gene TRUE TRUE AT5G41970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49320.1); similar to LOC496075 protein [Xenopus laevis] (GB:AAH87491.1); similar to LOC496075 protein [Xenopus laevis] (GB:AAI06661.1); similar to Os02g0686600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047772.1); contains InterPro domain Metal-dependent protein hydrolase; (InterPro:IPR003226) 0.628499823954884 7.64412888164352 1.26154717083487e-05 0.000331096502663603 11.7210597033048 15.7802055615327 0.628499823954884 0.0350761371978189 AT5G24310_at 4.46434789388850 4.72286081097861 5.06559181443896 5.33087270551660 6.51420180580316 5.60705983337612 4.8443242779377 5.48493486770327 2.82133838740315 4.14190320102684 5.00159661489386 5.1318679414907 5.69601584578317 5.50242152420154 5.34573433688515 5.83732080111196 4.78780795724069 4.73796570696731 4.28244594956644 0.293141006926990 0.290725885868908 0.291306367213551 0.290004320408205 0.289222188469847 0.305624645063354 0.289222188469847 0.293305917055395 0.30817616718203 0.299562586078478 0.290096142276681 0.300066385383257 0.289222188469847 0.303860825527183 0.289222188469847 0.289222188469847 0.308131953691814 0.297263382973476 0.292697029892726 5 5 + 8275349 8276296 8275952.9 8273549 8276529 + gene protein_coding_gene TRUE TRUE AT5G24310.1|AT5G24310.2 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) Identical to Protein ABIL3 (Abl interactor-like protein 3) (AtABIL3) (ABIL3) [Arabidopsis Thaliana] (GB:Q6NMC6;GB:Q3YIV3;GB:Q3YIV4;GB:Q9FNF1); similar to ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT3G49290.2); similar to Probable protein ABIL3 (Abl interactor-like protein 3) (GB:Q5NB83); similar to Os01g0236400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042529.1); similar to Os01g0551800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043308.1) 1.12842170278151 7.64069419106842 1.26670818196754e-05 0.000332249904343065 11.7171179315060 9.756101178074 1.12842170278151 0.202591611873120 AT5G38380_at 4.43217562507285 4.95902157748163 5.68066981283391 5.76507546354355 6.75560058167771 5.39858498224101 4.68904059203939 3.98086138788716 3.58194918340475 3.91779898527528 5.94140235887322 5.90348067092705 5.77299672153373 5.43594099649493 5.36245629720914 5.70995001151086 4.91899626228505 5.58213939723598 4.69967298583022 0.271763033262728 0.273962589113503 0.279689830523089 0.274009808750098 0.285780983729531 0.287486668310583 0.283316629205672 0.281123546506872 0.298303105832087 0.281472358332382 0.280781209926174 0.27376834962518 0.297064537288048 0.286500007284534 0.282922403664550 0.272853220988413 0.300824859505841 0.291948465113554 0.274565635915474 5 5 + 15364671 15365539 15365159.1 15362674 15365657 + gene protein_coding_gene TRUE TRUE AT5G38380.1|AT5G38380.2 similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04620.1); similar to PREDICTED: similar to Solute carrier family 30 (zinc transporter), member 5 [Strongylocentrotus purpuratus] (GB:XP_784123.2); similar to Os07g0283200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059381.1)|similar to Os07g0283200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059381.1) 1.44832726789622 7.62862775639355 1.28502079428528e-05 0.000336849411285173 11.7032578160896 10.0300757816866 1.44832726789622 0.280524764383826 AT5G45190_at 7.83164286565976 7.72330763737285 8.72099033257799 8.3196782976068 8.91476242983382 8.23914879390913 7.22596953767692 7.3850674159984 7.96379417399383 7.9188189255434 8.84576401966648 9.17736217782081 8.76610828548168 8.96654096862048 8.49907810910305 8.84149040720205 8.59278688514203 8.4203921142989 8.0754174203403 0.145100133616401 0.137370889207391 0.139311756778652 0.140033027324306 0.139728590738960 0.147048156813961 0.142664009042805 0.141065188629026 0.141525195388362 0.140882880810395 0.141099013948144 0.142484328721216 0.141040605845073 0.143420708061183 0.145923344839565 0.140029072619914 0.145367369178226 0.137370889207391 0.138323060609701 5 5 - 18295080 18295605 18295340.364 18294847 18299102 - gene protein_coding_gene TRUE TRUE AT5G45190.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT4G19600.1); similar to Os12g0485400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066781.1); similar to Cyclin, N-terminal domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92940.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.892414148464687 7.62286131073161 1.29387295755269e-05 0.000338964939965657 11.6966274452161 16.4199211859342 0.892414148464687 0.140009008237867 AT5G11380_at 3.76925466118069 4.06806706041137 4.59759631979998 4.80882735840127 5.04665333322157 4.90925774124192 4.15268531496554 4.65440094416334 4.26109509149953 4.26990046146561 4.87018417125936 5.71771529192059 5.30103214710522 5.26135485325371 4.99720384703484 5.43390132773922 5.01258200523453 5.1317151892044 4.38985865253014 0.22037186064846 0.223644787638889 0.220560297278431 0.215155343075746 0.222962849824214 0.233951996319355 0.224025915470818 0.215661967116962 0.225455892968568 0.220913191739445 0.218551773769106 0.214906445925626 0.214906445925626 0.228628829343383 0.228317793555828 0.214955320007855 0.234362810910706 0.221244511780509 0.218407049368939 5 5 + 3632509 3633216 3632870.909 3629999 3633442 + gene protein_coding_gene TRUE TRUE AT5G11380.1|AT5G11380.2 DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3); 1-deoxy-D-xylulose-5-phosphate synthase|DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] (GB:CAD22530.1); similar to Deoxyxylulose-5-phosphate synthase [Medicago truncatula] (GB:ABE78977.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var. lobata] (GB:AAQ84169.1); contains InterPro domain Transketolase, C-terminal; (InterPro:IPR005476); contains InterPro domain Deoxyxylulose-5-phosphate synthase; (InterPro:IPR005477); contains InterPro domain Transketolase, C-terminal-like; (InterPro:IPR009014); contains InterPro domain Transketolase, central region; (InterPro:IPR005475)|similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to Deoxyxylulose-5-phosphate synthase [Medicago truncatula] (GB:ABE78977.1); contains InterPro domain Transketolase, central region; (InterPro:IPR005475) 0.79412069762409 7.61517237749695 1.30577888972665e-05 0.000341877447737111 11.6877797725595 9.26217409463608 0.79412069762409 0.110063789661107 AT5G51940_at 8.82894522840154 8.94018888358829 9.5307715086629 9.48980475777337 9.70103862353293 9.6070760506596 8.69460650598185 8.8204120285623 8.66870444894919 8.53513290441714 9.19117816497342 9.16219793101229 9.12764291724873 9.14121539141801 8.89021155824334 9.22020126509897 9.14492729452425 8.92196997779371 8.63287611698435 0.106902849501987 0.107120861219419 0.107284586185726 0.107630510194228 0.109529215264564 0.114193540158167 0.109760356585837 0.110405198388999 0.119064937673484 0.111838017627367 0.110441663225364 0.107812588022332 0.107846897761983 0.107242588117286 0.109632463716257 0.106353434439282 0.126155324509569 0.109509007191701 0.113192609328821 5 5|0 +|/ 21121918 21122990 21122612.6 21121797 21123173 + gene protein_coding_gene TRUE TRUE AT5G51940.1 DNA-directed RNA polymerase II, putative similar to DNA-directed RNA polymerase II, putative [Arabidopsis thaliana] (TAIR:AT2G04630.1); similar to Os07g0463100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059582.1); similar to Os03g0586600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050570.1); similar to DNA-directed RNA polymerase IIa [Nicotiana tabacum] (GB:AAD34613.1); contains InterPro domain DNA-directed RNA polymerase, 14 to 18 kDa subunit; (InterPro:IPR006111); contains InterPro domain RNA polymerase subunit, RPB5/RPB6-like; (InterPro:IPR009026); contains InterPro domain RNA polymerase subunit, RPB6/omega; (InterPro:IPR012293); contains InterPro domain RNA polymerase Rpb6; (InterPro:IPR006110) 0.624419906306284 7.60964357620647 1.31441301936576e-05 0.000343930337702137 11.6814129699690 18.05769589139 0.624419906306284 0.0340480026974171 AT5G03290_at 9.74961525519352 9.88654423803418 10.4480744724982 10.7335286700634 10.3986119729630 9.9971414909949 9.50147087401529 9.57188610166508 9.5215685968964 8.98425839689044 9.94627021761709 9.99778583618819 9.87049590053499 9.87356689928894 9.86646183458422 9.96030919437316 9.40547848286829 9.9393932743879 8.81248024100889 0.109419937723870 0.104609219841702 0.114552227013897 0.106146713707923 0.104858668926375 0.112667340516304 0.109527339040434 0.105552173722892 0.110865907128591 0.110551308254178 0.104609219841702 0.104609219841702 0.107891765435474 0.108455795331972 0.108831628645416 0.104627752422982 0.114732964916102 0.111172288945114 0.112458893184614 5 5|0 +|/ 794827 795881 795373.9 793977 796181 + gene protein_coding_gene TRUE TRUE AT5G03290.1 isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative Identical to Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase 5) (NAD(+)-specific ICDH 5) (IDH-V) (IDH5) [Arabidopsis Thaliana] (GB:Q945K7;GB:Q9LZG1); similar to isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G09810.1); similar to NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica napus] (GB:AAO61642.1); contains InterPro domain Isocitrate dehydrogenase NAD-dependent, mitochondrial; (InterPro:IPR004434); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804) 0.734163913892312 7.60853836141942 1.31614637141917e-05 0.000344176177527844 11.6801397558814 19.5176454427179 0.734163913892312 0.0893154043789329 AT5G50000_at 8.96904418795202 8.78783641181871 8.99861941022835 8.90688031466184 9.58114072852602 9.42345666546982 8.7298677324013 8.31449985179139 8.90698283519458 8.93747220879564 10.2283197816370 10.2146242095595 10.0357355740623 9.91387779705948 10.1940901238355 9.94813510503556 9.45182426464327 9.9320720888509 9.37700531252482 0.108335096649178 0.103579863849704 0.110701544094110 0.110946673439377 0.106574594947224 0.107298723594087 0.108054419394195 0.106999822556615 0.109645661136222 0.115383379834440 0.103092882210581 0.102223585488951 0.102561633323848 0.101676623719796 0.103240608355541 0.102267796935260 0.106877881571743 0.106144819890522 0.105073842399165 5 5|0 -|/ 20360084 20360944 20360508.875 20359813 20362359 - gene protein_coding_gene TRUE TRUE AT5G50000.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G01490.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06451.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.721613491488874 7.60780347191654 1.31730029304426e-05 0.000344270289541665 11.6792930698794 18.4957456563181 0.721613491488874 0.084539826465174 AT5G02020_at 7.18158280593983 7.22911568445723 9.1396188941607 9.09354806973355 9.78401593970144 9.33883358745138 8.47664218212914 8.37383084663166 7.55336477509037 6.57467988123873 6.10395125737317 7.01543819223945 7.60097216858136 6.83692023182938 5.96142941803713 8.26679476457794 8.0233474648078 6.61922583787361 7.34454021365543 0.197316050062339 0.197316050062339 0.205299832293172 0.204546674130333 0.220386623153586 0.217556557419494 0.207970155163277 0.201115658203263 0.198327278295152 0.204187628057873 0.209041182760293 0.201115239822313 0.197316050062339 0.205277514960139 0.207480871257938 0.197316050062339 0.224297146986990 0.207360055281826 0.208336124823938 5 5|0 -|/ 386673 387881 387313.556 386079 388120 - gene protein_coding_gene TRUE TRUE AT5G02020.1|AT5G02020.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59080.1) 0.70984643494622 7.60682599663221 1.31883681442400e-05 0.000344464218594148 11.6781667842477 15.6826676047305 0.70984643494622 0.0798941848691862 AT5G64170_at 9.95748652361722 9.99865945592052 10.9317090842418 10.9119937393011 10.9816611283902 10.8125008429374 10.8006928726995 10.7178623857820 9.3930272658409 10.0196500822868 10.5331295822387 10.3338606188569 10.7854637853387 10.4368496755188 10.2168228011565 10.6453843926221 10.8573608492075 10.5340731661879 10.0994579583322 0.0808814484548558 0.0782261683221817 0.081709223896236 0.080970077604054 0.0780562171800626 0.0835846423092881 0.0780562171800626 0.0828248692771251 0.0910324381071031 0.0839514371321559 0.0801951887152087 0.0797971417556127 0.0784081856585866 0.0850987698208724 0.0811710172255305 0.0820432847373587 0.0801336804884627 0.0813972204773348 0.0839300665181467 5 5|0 -|/ 25690199 25691122 25690680.8 25689692 25693972 - gene protein_coding_gene TRUE TRUE AT5G64170.1|AT5G64170.2 dentin sialophosphoprotein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54500.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96328.1); similar to Os03g0387900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050262.1) 0.62314028130853 7.60139822101888 1.32740415393177e-05 0.000346493173185395 11.6719104010793 20.8291940263000 0.62314028130853 0.0335386889681512 AT5G53540_at 7.20735124326253 7.36105123540949 8.20024296117264 8.28473735232258 8.07773069439559 7.76478885699484 7.4142841284071 7.23346361545931 7.0304220591152 7.20376820804958 7.75396590016476 7.8448183580231 7.43284560600564 7.54941102920117 7.84238608353845 7.8209724979654 7.47038766965995 7.67414638720847 7.01021630175587 0.131978862590554 0.137885335490280 0.136957147507457 0.141458260529834 0.138171187487123 0.143297791039556 0.140790042273527 0.131256967249826 0.149369002726305 0.144282439991690 0.131611292029966 0.136187506978817 0.135055889173215 0.132548456140868 0.135391913816516 0.132018380595907 0.141437283351488 0.138298507824076 0.136883982804373 5 5|0 -|/ 21766801 21767398 21767013.1 21766512 21768463 - gene protein_coding_gene TRUE TRUE AT5G53540.1 MSP1 protein, putative / intramitochondrial sorting protein, putative similar to MSP1 protein, putative / intramitochondrial sorting protein, putative [Arabidopsis thaliana] (TAIR:AT4G27680.1); similar to Os06g0714500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058575.1); similar to AAA+-type ATPase (ISS) [Ostreococcus tauri] (GB:CAL52837.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.684992622875394 7.60061866870671 1.32863954358250e-05 0.000346606974077776 11.6710115236064 15.0704990348169 0.684992622875394 0.0695222512722378 AT5G58003_at 5.07544936076432 5.28304009676063 5.62381177108417 5.86324138333863 6.29545503980176 6.03068127935213 4.57411205459816 5.27945622884542 4.43807784823851 4.60887937945461 5.35165737803336 5.74523991947409 5.54090338341326 5.95705324359835 5.1658991302788 5.62391222968515 5.76178881883278 5.29195308689882 4.95348073287889 0.20053301579104 0.199825562531878 0.201718964160628 0.207061315355926 0.195760846113566 0.213520224232918 0.199436249720049 0.202359220998153 0.213210870506489 0.206670774694959 0.204947218577243 0.203331947653323 0.195583352683041 0.201055070287368 0.195583352683041 0.201070690450998 0.209115099971772 0.19858871900994 0.201775889460273 5 5 + 23498400 23499007 23498800.273 23497030 23499274 + gene protein_coding_gene TRUE TRUE AT5G58003.1 phosphoprotein phosphatase Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences. similar to CPL3 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3), CTD phosphatase [Arabidopsis thaliana] (TAIR:AT2G33540.1); similar to BRCT; NLI interacting factor [Medicago truncatula] (GB:ABE80113.1); similar to Os05g0390500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055440.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain FCP1-like phosphatase, phosphatase domain; (InterPro:IPR011947); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 0.894135589202433 7.5953876081806 1.33696159308820e-05 0.000348568248861128 11.6649776821035 10.6139626779686 0.894135589202433 0.141443580611344 AT5G09890_at 7.00336360235598 6.52316322063493 7.4946053333596 7.29182022402883 7.91611619154124 6.96864221017147 6.43752372714404 6.19060645382431 6.48789777783743 6.2698248032405 8.01027425041227 7.72125836496622 7.73949147754133 7.83410824800962 7.71956169183845 7.67620952822708 7.26889667360454 7.07547535510509 6.29140388451787 0.164873287097383 0.174044812966429 0.165992193075022 0.164873287097383 0.170194910385610 0.172882068210178 0.183759325766034 0.175381040481912 0.181439707688999 0.164927899935717 0.166569367965050 0.166146730739894 0.167360073015263 0.168610074963034 0.164873287097383 0.168735589420317 0.170768704428947 0.171780137384566 0.171265177319497 5 5 - 3085955 3087148 3086678.545 3085546 3089011 - gene protein_coding_gene TRUE TRUE AT5G09890.1|AT5G09890.2 protein kinase, putative|kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.3); similar to protein kinase [Raphanus sativus] (GB:BAC76894.1); similar to Serine/threonine protein kinase [Medicago truncatula] (GB:ABE88922.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, C-terminal; (InterPro:IPR000961); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.3); similar to protein kinase [Raphanus sativus] (GB:BAC76894.1); similar to Serine/threonine protein kinase [Medicago truncatula] (GB:ABE88922.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, C-terminal; (InterPro:IPR000961); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 1.08004118281664 7.59446194978217 1.33844006397257e-05 0.000348744003190075 11.6639095931404 13.9684142556717 1.08004118281664 0.191957276487723 AT5G03370_at 4.62190320470447 4.95700146255878 5.82043382693300 5.84703110393028 5.87105491630064 5.32942781141077 6.04168774850025 5.93244873830721 4.43477981473024 4.58324679705267 5.7474192201369 5.70476777821706 5.33446619070973 5.44430079185493 6.050466909486 5.66010421548933 5.67956714860328 5.8140315634406 4.22291035540064 0.235041321387374 0.222197595617765 0.219371421488613 0.223223702845351 0.229560657923635 0.236737464768357 0.218420717337360 0.23230755020204 0.22150290024825 0.222705970375717 0.221327214968263 0.218420717337360 0.225427988686725 0.223408373222009 0.232058634474087 0.222394228932598 0.243045809737594 0.222375735131527 0.224218977176481 5 5|0 -|/ 825828 826958 826380.7 825572 827042 - gene protein_coding_gene TRUE TRUE AT5G03370.1 acylphosphatase family similar to acylphosphatase [Nitrobacter sp. Nb-311A] (GB:ZP_01047119.1); contains InterPro domain Acylphosphatase; (InterPro:IPR001792) 0.797235723820182 7.59075713748929 1.34437511337129e-05 0.000350080055279397 11.6596335939290 10.5991416680657 0.797235723820182 0.111923876731134 AT5G04270_at 3.96962484623627 4.18725092692848 4.69483317147132 4.4395796802566 5.76719566061762 5.23566425174476 4.12374338198441 4.25166750661462 4.73934454288202 4.20014599508803 5.25349051416488 5.518627302231 5.06449065821526 5.62191505500226 4.78561675170812 4.62122302515864 4.25939797651572 5.0000001237997 4.04624193546651 0.249446494584717 0.243929416861391 0.248620751077292 0.248035501191723 0.246090098055525 0.262586835543111 0.243929416861391 0.245797434292656 0.260767725076910 0.247933141800612 0.245837884468070 0.243929416861391 0.246548578773971 0.247471648100214 0.255356632422636 0.244163460115457 0.258312186986247 0.259433103563707 0.250647088006182 5 5|0 -|/ 1182908 1184004 1183522.222 1182719 1184766 - gene protein_coding_gene TRUE TRUE AT5G04270.1 zinc ion binding similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G09320.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE87833.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 0.79413210514278 7.5880672999239 1.34870198245146e-05 0.000350995978962866 11.6565279197373 9.25578126172924 0.79413210514278 0.110998841898034 AT5G26330_at 2.32733913436973 2.02575192098506 2.47378628443977 2.51498887415996 2.47559051038596 2.68480974358412 3.44297860044266 3.12163640880228 2.77837214327660 2.36204941013197 3.85097086355633 4.44859990467192 3.82456703951804 4.04472713789781 4.74108283915283 4.37879845899354 3.99258645156261 4.21588581047869 2.52518295181260 0.239695477464529 0.223840961319966 0.227972291115081 0.224071373631705 0.233763543670962 0.231632318160185 0.224899208416836 0.237246727725824 0.230487856280570 0.233346203861987 0.228208162678410 0.22808816648392 0.223840961319966 0.231309190319390 0.231941406072757 0.230674466988985 0.241696155771688 0.229096437480971 0.231092818214421 5 5|0 -|/ 9241666 9242600 9242217.4 9241549 9242716 - gene protein_coding_gene TRUE TRUE AT5G26330.1 plastocyanin-like domain-containing protein / mavicyanin, putative similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G31050.1); similar to Blue (type 1) copper domain [Medicago truncatula] (GB:ABE91701.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 0.719909074240552 7.58487765112106 1.35385233210317e-05 0.000352124983750591 11.6528439302919 6.00453709213088 0.719909074240552 0.0847236456068597 AT5G23320_at 1.91356894584841 1.97117651710779 2.82678875749122 3.24299066164942 3.85337376401068 2.98723356114075 1.88993073376540 1.85364256446658 1.64489927515919 1.96664314000052 2.43481287937332 2.16792631529535 2.41713410033824 2.85892862698755 2.23253743617744 2.15068614560095 2.56143220039392 2.24277983229457 1.60250913706453 0.205901171491079 0.207339451005988 0.212390064482038 0.221527970799914 0.204979238172751 0.218071326257516 0.202659030484221 0.203229319128291 0.211854133288993 0.210166247096971 0.203657431366598 0.201824435090113 0.209742455293624 0.203751739834249 0.206722803908680 0.200514606379050 0.211212591119454 0.205761462237497 0.201497276530867 5 5 + 7853414 7853936 7853651.909 7853371 7853964 + gene protein_coding_gene TRUE TRUE AT5G23320.1 ATSTE14 (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE 14A); protein-S-isoprenylcysteine O-methyltransferase Encodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. similar to ATSTE14B (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE), protein-S-isoprenylcysteine O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G08335.1); similar to OSJNBa0041A02.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE01825.2); similar to PREDICTED: similar to Protein-S-isoprenylcysteine O-methyltransferase (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT) isoform 1 [Canis familiaris] (GB:XP_546748.1); similar to Os04g0602900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053777.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) 0.982889751879449 7.5826949351871 1.35738900871394e-05 0.000352833184389811 11.6503221581989 4.62798662625124 0.982889751879449 0.166713568178017 AT5G27950_at 8.5967134939286 8.22266559221545 9.48039875545932 9.07866538070795 10.2732672005764 9.52344362923541 8.61465228871752 7.49307296581365 6.99338242698902 8.60138779293227 9.53804902602661 9.10707958600074 9.32883452265328 9.4650775777308 8.75869305873337 9.34975471718875 9.72590984520795 9.13739312775432 8.46636374962583 0.131370266384880 0.126198028335410 0.132830888543288 0.130934573119494 0.128530335349142 0.132803045477612 0.130874003122199 0.144687884571869 0.178873795831021 0.127615245493915 0.129150794626893 0.125022129530085 0.127349360115421 0.127934597002400 0.133002067179580 0.126865578351480 0.130730710443755 0.139168407669642 0.125815832366826 5 5 + 9987032 9987448 9987207.091 9984055 9987994 + gene protein_coding_gene TRUE TRUE AT5G27950.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G55550.1); similar to BY-2 kinesin-like protein 5 [Nicotiana tabacum] (GB:BAB40709.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 1.31906929956946 7.5761797342958 1.36800507625889e-05 0.000355171816345539 11.6427911704688 17.5712233745873 1.31906929956946 0.252059158704793 AT5G05450_at 2.23404012023480 2.8933490588443 2.87898837871658 3.02422951045078 3.39946052838373 3.30736574826452 2.50493871921464 2.46002241945985 2.87531680181944 2.96741823649336 4.13479414607553 4.33903438488218 4.17473353641212 3.64323252051767 4.00711364694971 4.06704226174487 3.14980400774537 2.87094789410114 2.55016128138302 0.20750189122122 0.204282913319290 0.208187761075067 0.207413214822594 0.205781328557397 0.211718017362176 0.200256821474884 0.222423322841046 0.210787270802247 0.217040156201606 0.205095976726709 0.200786785496901 0.200009307214995 0.221471977879456 0.212544914997385 0.200009307214995 0.218462758624707 0.208540493491273 0.211160246634025 5 5|0 +|/ 1614167 1615063 1614647.111 1612007 1615357 + gene protein_coding_gene TRUE TRUE AT5G05450.1 DEAD/DEAH box helicase, putative (RH18) Identical to DEAD-box ATP-dependent RNA helicase 18 (EC 3.6.1.-) (RH18) [Arabidopsis Thaliana] (GB:Q9FLB0;GB:Q9ZS03); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT1G71370.1); similar to Os01g0164500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042102.1); similar to ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL56961.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 0.815064577626902 7.57616796046048 1.36802434181101e-05 0.000355171816345539 11.6427775559030 6.13578426363057 0.815064577626902 0.118170131721647 AT5G08560_at 8.8146785118335 9.10523908219217 9.64932181263575 9.74852956880196 9.66683066155432 9.40826692762994 8.65831048124059 8.8009098127856 8.98054622759273 8.96849967608857 9.70000353177483 9.72383073708823 9.86331279691921 9.70399490199224 9.4266749842363 9.8226794743511 9.3378349418673 9.36874602700851 9.07596006018293 0.113079073002397 0.106534053743125 0.109826057494104 0.106676220767715 0.108546620783604 0.120469086870329 0.109181048327126 0.113540224869953 0.120036677259323 0.110929691588184 0.106534053743125 0.107727082021965 0.107488587785472 0.112182766464462 0.108427794381262 0.108614460180134 0.114336339341617 0.118314502600061 0.109437465716422 5 5 - 2771110 2771932 2771623.545 2770875 2774673 - gene protein_coding_gene TRUE TRUE AT5G08560.1|AT5G08560.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G43920.1); similar to PREDICTED: similar to WD-repeat protein 26 [Danio rerio] (GB:XP_693216.1); similar to Os02g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046605.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 0.691751061879584 7.57046808711996 1.37738552486087e-05 0.000357385199154322 11.6361844118276 18.5448708551806 0.691751061879584 0.073717508283488 AT5G40910_at 5.58123215773096 5.11366451628227 6.57682309252959 6.57407194964032 6.94635820984456 6.01913510496897 5.01322003424264 3.80009897188244 5.06134009141794 5.47579878628488 6.68373373294546 6.75959202383758 6.21652716568561 7.11735551920852 6.0436340887057 7.07370051919905 7.15762189832379 6.18028896310834 5.86384122832679 0.233537666298058 0.225655636912976 0.237390768761045 0.225097809233092 0.225097809233092 0.235857136100591 0.227410623699383 0.230606267737779 0.242273790878246 0.232923107091890 0.231883445581167 0.227688147932781 0.227406966602905 0.225097809233092 0.233219687756122 0.225097809233092 0.225097809233092 0.252134416683554 0.225097809233092 5 5 + 16415773 16416248 16416029.364 16412735 16416357 + gene protein_coding_gene TRUE TRUE AT5G40910.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41750.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41540.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41550.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.41955326970575 7.56997520681934 1.37819824731309e-05 0.000357385199154322 11.6356140870326 11.7636005584169 1.41955326970575 0.276347896314180 AT5G11490_at 8.55168240454972 8.73229371706736 9.12149309988898 9.18791657554911 9.25797393425756 9.06517124615883 8.34895562485227 8.39170108137387 8.4565325727536 8.19908609636373 8.85687363727378 9.08020485074615 8.85733334890526 8.86760018842662 9.16945357381499 8.96492779836178 8.72602044343405 9.12453833601014 8.32971774810985 0.115862351353570 0.116580175796677 0.112221801651726 0.11699657020632 0.115437663593045 0.109487326224421 0.11229486102176 0.115931069450957 0.116380049751216 0.118267752019063 0.112226170185623 0.108033066785095 0.113838514524053 0.111012097151498 0.108033066785095 0.111750300395599 0.117656906741162 0.113175108601053 0.120320541446931 5 5 + 3675313 3676084 3675652.727 3671819 3676310 + gene protein_coding_gene TRUE TRUE AT5G11490.1 adaptin family protein similar to beta-adaptin, putative [Arabidopsis thaliana] (TAIR:AT4G23460.1); similar to beta adaptin-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61154.1); contains InterPro domain Adaptin, N-terminal; (InterPro:IPR002553); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain AP2 clathrin adaptor, alpha and beta chain, appendage; (InterPro:IPR009028); contains InterPro domain Beta2-adaptin/TATA-box binding, C-terminal; (InterPro:IPR012295) 0.639702028357674 7.56220424536743 1.39108060188357e-05 0.000360510149506023 11.6266178618386 17.4743057077275 0.639702028357674 0.0477181015720428 AT5G18200_at 5.10129041024433 5.85860925099056 6.2496283298597 6.860883605411 7.79864277109037 7.03932847065957 5.81588162475247 5.79765866374838 4.96610006704707 4.86981298112116 6.03990334195219 6.0960054961271 5.64452096463658 6.19566982091362 5.31664367764916 5.84920508658343 6.07978814506153 6.13476810628956 4.99173743376173 0.252550085828540 0.254700361850673 0.274212721181834 0.263578933431035 0.262755870726676 0.264198666441923 0.26535805585979 0.260405517525552 0.272616979177580 0.265698261434225 0.258003323548775 0.252550085828540 0.259376620832158 0.261169849889049 0.266981453275573 0.252550085828540 0.272676504122204 0.257711281439653 0.266415539844604 5 5 + 6015957 6016499 6016237.545 6015229 6016784 + gene protein_coding_gene TRUE TRUE AT5G18200.1 UDP-glucose:hexose-1-phosphate uridylyltransferase Identical to Probable galactose-1-phosphate uridyl transferase (EC 2.7.7.12) (Gal- 1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) [Arabidopsis Thaliana] (GB:Q9FK51;GB:Q8LB75); similar to galactose-1-phosphate uridyltransferase [Cucumis melo] (GB:ABD98821.1); contains InterPro domain Galactose-1-phosphate uridyl transferase, class I; (InterPro:IPR001937); contains InterPro domain Galactose-1-phosphate uridyl transferase; (InterPro:IPR011573) 1.16038686303977 7.56154368043017 1.39218163340879e-05 0.000360579962049079 11.6258527763222 11.7462970111170 1.16038686303977 0.213640529339902 AT5G43100_at 7.3626620115346 7.8230564150048 8.48244351545376 8.35104998292341 8.42682777554024 8.05717896896595 6.874455918576 7.0174610814947 7.36685322975425 7.12547419346532 7.97744787162573 7.97454982865925 7.66559279993643 7.99594994091815 7.58906886120432 7.91922423482866 7.4031039828173 8.0752395825581 7.48194562058238 0.198590402802928 0.200685561234187 0.196635648923119 0.202027770631548 0.194622946285442 0.204152519496965 0.204136635043697 0.200338603626212 0.210901665934469 0.205150802783121 0.200137763264410 0.192067961554011 0.192067961554011 0.213142739374279 0.200184119619309 0.196441674730884 0.198859680245609 0.205563800490588 0.199020780613112 5 5 + 17318608 17319918 17319230.5 17316351 17320286 + gene protein_coding_gene TRUE TRUE AT5G43100.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G50050.1); similar to Peptidase aspartic, active site [Medicago truncatula] (GB:ABE87026.1); similar to Os07g0592200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060161.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.780115330309748 7.55270794659669 1.40699981425368e-05 0.000364200360305743 11.6156134259201 15.3742818682296 0.780115330309748 0.107561232749023 AT5G05080_at 9.27241178666931 9.18651645331071 9.69187703883702 9.68707711120207 10.0411887367039 9.956109348446 9.2247074050484 9.18061515868943 9.43099219660477 9.42247357907864 10.2098833580099 10.1995754509912 10.2081668737849 10.0611594060562 10.1009939785746 10.0306861446201 9.74350178936377 10.0871740616556 9.62628815738011 0.09153453678198 0.0913497861598322 0.0921809746219984 0.0917572100213932 0.0914789376638391 0.0921450300203692 0.0924830264651538 0.0916221747927374 0.0992524547814967 0.0915146944506998 0.0877852465318097 0.0902056465824471 0.0904800917596505 0.0898911468231228 0.090970122035405 0.0877346106710304 0.101075460868422 0.0882864207597267 0.0898784855089563 5 5|0 -|/ 1498826 1499555 1499078.25 1498554 1500785 - gene protein_coding_gene TRUE TRUE AT5G05080.1|AT5G05080.2 UBC22 (ubiquitin-conjugating enzyme 18); ubiquitin-protein ligase|UBC22 (ubiquitin-conjugating enzyme 18) similar to ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G02760.1); similar to Ubiquitin-conjugating enzyme, E2 [Medicago truncatula] (GB:ABE91564.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.607445839864333 7.54445356035107 1.42099686900140e-05 0.000367561512316911 11.6060384425126 19.3167598518150 0.607445839864333 0.0222855681927177 AT5G36290_at 7.63668013463827 8.10979462126578 8.42771635964864 8.37699559448128 8.94101924530746 8.36865879109314 7.84095054009434 8.12098601839081 8.2640811907029 7.46544708879577 9.21620493699236 9.2786040822993 9.07291801652276 8.86729709310894 9.15880571428915 8.62699456407603 8.42950121081223 8.64921723979755 7.56189991380221 0.205464370792403 0.174453866266030 0.189730187839585 0.191606932060781 0.184958956806240 0.191679133098727 0.198077296733598 0.18246699813295 0.197340275739791 0.188178430408244 0.18487532341733 0.179012731623724 0.186834206847722 0.198940626178038 0.174277825154054 0.180543409058826 0.180901019064309 0.191484049978275 0.189053030607996 5 5|0 +|/ 14320803 14322140 14321572.571 14319969 14322406 + gene protein_coding_gene TRUE TRUE AT5G36290.1|AT5G36290.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25520.1); similar to Uncharacterized protein family UPF0016 containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22482.1); similar to Os11g0472500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067880.1); similar to Os08g0528500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062312.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) 0.875064064252832 7.54392356222744 1.42190071125150e-05 0.000367561512316911 11.6054233432241 16.5659762906171 0.875064064252832 0.137622125021864 AT5G21170_at 9.04683612714447 9.13640936920357 9.1629780073632 9.31743318087862 10.1977881228505 10.1624534886670 7.54557830546721 7.98266446333711 9.69783507424255 9.34735224753766 10.0160242300520 9.64995393214222 9.95117094006187 9.74029820551096 9.4380846495592 10.0416309549034 9.31450698917478 9.71134328659644 9.74647719103021 0.109189420219478 0.105641448400765 0.114155677937388 0.106054849199607 0.106346140577961 0.109791297905087 0.112596911941221 0.104151642739344 0.112146472226461 0.110245665984956 0.108578779189616 0.105292008417505 0.106122211903397 0.105001965669584 0.105770247348695 0.10372742628255 0.106202213751441 0.109625175380430 0.111243408080784 5 5 + 7207516 7208207 7207906.636 7205565 7208499 + gene protein_coding_gene TRUE TRUE AT5G21170.1|AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative|AMP-activated protein kinase Identical to SNF1-related protein kinase regulatory subunit beta-1 (AKIN beta1) (AKINB1) (KINB1) [Arabidopsis Thaliana] (GB:Q84VQ1;GB:Q9SCY6); similar to 5'-AMP-activated protein kinase beta-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT4G16360.1); similar to AKIN beta1 [Medicago truncatula] (GB:AAO61676.1); contains InterPro domain 5-AMP-activated protein kinase, beta subunit, complex-interacting region; (InterPro:IPR006828)|similar to 5'-AMP-activated protein kinase beta-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT4G16360.1); similar to AKIN beta1 [Medicago truncatula] (GB:AAO61676.1); contains InterPro domain 5-AMP-activated protein kinase, beta subunit, complex-interacting region; (InterPro:IPR006828) 0.708973138940859 7.54355590503293 1.42252806672274e-05 0.000367561512316911 11.6049966298995 18.7340667094991 0.708973138940859 0.0819359671079214 AT5G45480_at 8.22748201143776 8.20348186606423 8.51085908529422 8.72503458373262 7.99711435863831 8.20563227624599 6.21126812297046 6.89234060944175 7.79574408502205 6.60705197606439 8.14962998181721 8.32045978830797 7.68852890886901 8.19762112947323 7.95491414266892 7.32111564617832 7.39855402211783 7.93433640854658 7.06602844178468 0.171133038255838 0.165388593072455 0.168851494371279 0.166231715191495 0.167060616223844 0.165567650740826 0.196362642815666 0.178873142623042 0.174685238887579 0.171625846282387 0.173715533921989 0.175458865906697 0.170724423999482 0.173061046463153 0.173310957457680 0.168939588955343 0.170007157059320 0.173580624123628 0.179206502527004 5 5 - 18443644 18444094 18443876.818 18443331 18446317 - gene protein_coding_gene TRUE TRUE AT5G45480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45470.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45530.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45540.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87859.1); similar to Os01g0953100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045426.1); contains InterPro domain Protein of unknown function DUF594; (InterPro:IPR007658) 0.845193546353122 7.5401455936108 1.42836153827779e-05 0.00036877901180998 11.6010376728352 15.3851115331220 0.845193546353122 0.128781811971603 AT5G57190_at 4.19092572398671 3.69747183896807 5.56663134548647 5.00210241069708 5.66153783758497 5.46182427632412 5.28923890899681 5.0967859976548 4.03387679240381 4.28530574677260 5.47770496161473 4.41957097981783 4.29410913009238 5.00656398668336 4.48801246562054 5.22676714208484 5.68764866405968 5.47600444636885 4.01068024115175 0.218852206313934 0.213412986432051 0.208963261234173 0.202325079545834 0.217996965219267 0.218112753353727 0.213843718976977 0.202325079545834 0.225503967843330 0.202480586389444 0.209981031110399 0.202517571534886 0.207450208212453 0.206690482209509 0.20720334536165 0.209892678803589 0.223991576557813 0.202325079545834 0.205179188735302 5 5|0 -|/ 23188771 23189920 23189355.6 23188757 23192590 - gene protein_coding_gene TRUE TRUE AT5G57190.1 phosphatidylserine decarboxylase, putative similar to PSD2 (Phosphatidylserine decarboxylase 2) [Arabidopsis thaliana] (TAIR:AT4G25970.1); similar to phosphatidylserine decarboxylase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87120.1); similar to Os01g0959800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045461.1); contains InterPro domain Phosphatidylserine decarboxylase-related; (InterPro:IPR003817); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973); contains InterPro domain Phosphatidylserine decarboxylase; (InterPro:IPR005221) 0.877005906027476 7.53948277157854 1.42949831415374e-05 0.00036877901180998 11.6002680381824 9.55556578353846 0.877005906027476 0.138347791397132 AT5G11890_at 3.42277247451308 4.22536906835618 3.11668713581089 3.73359562373221 4.02151453652711 4.33656316782873 2.86300683968207 2.62389031427651 3.46895073246107 2.62717961298368 5.05966619539308 5.36154302923214 4.11749005588564 4.87500210504651 5.10196290972673 4.80389492768739 3.18621255843813 4.85082928371935 3.12387450550791 0.263323751080564 0.266298371203366 0.270051390844443 0.269568516945918 0.264842536682847 0.268239297412637 0.263323751080564 0.269003805335234 0.266105620296444 0.266761992700106 0.263633827894716 0.263323751080564 0.267516824360308 0.264756226918346 0.264570810857107 0.263323751080564 0.278077988016593 0.267423382321418 0.263323751080564 5 5 + 3832045 3832419 3832228.182 3831665 3832945 + gene protein_coding_gene TRUE TRUE AT5G11890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17620.1); similar to Heavy metal transport/detoxification protein; Harpin-induced 1 [Medicago truncatula] (GB:ABE94112.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 1.05728531229567 7.53903489665458 1.43026699663019e-05 0.00036877901180998 11.5997479560339 7.41437993682018 1.05728531229567 0.188078634020710 AT5G54380_at 6.1932809967719 5.8870433329018 6.7018299004824 7.10731986998379 6.95398658856495 7.58472160055216 6.67170576440492 6.29257616407803 7.18842817051081 7.18824739702296 9.30567790689237 7.9797548906006 8.62551141660366 8.5853349193543 8.08441977810125 7.61545972664176 7.3772455627967 8.15065370819608 7.14321744684198 0.179727283216106 0.184428197100011 0.178729716034517 0.176867478028364 0.182492849065894 0.178962776266547 0.183025781561682 0.181890676817269 0.189772985186444 0.191877757498568 0.182692768294959 0.174268578059463 0.174945703716234 0.179998501285067 0.177735551360450 0.177186389091531 0.176350845301448 0.17506373973995 0.187739181067530 5 5 - 22094541 22095104 22094783.636 22094318 22097106 - gene protein_coding_gene TRUE TRUE AT5G54380.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59700.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G21480.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to putative protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAK63934.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98993.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.93401124627321 7.53881635098437 1.43064224588648e-05 0.00036877901180998 11.5994941663765 14.3684604822710 0.93401124627321 0.154762499581752 AT5G47720_at 6.26064034267912 6.06154663399688 7.4953323648935 7.211100401525 7.55242905637473 7.27811869048467 6.73924384806078 6.75179161165251 6.4660929077919 6.88056197992168 7.05667266837282 7.23320133325938 6.82185415829971 7.185813562892 7.01060582364974 7.34703514089265 7.40991099092782 7.37509853437082 6.81379644230046 0.165196600754846 0.151660042893798 0.155973540295707 0.155182826823320 0.145629196770084 0.150584543942864 0.154245569075175 0.156528026733011 0.1527807103993 0.149699628302988 0.154007094236781 0.150713399297111 0.152585897124545 0.155103637018706 0.147639929138665 0.147651013351712 0.152263474286986 0.145329743024126 0.149441387971266 5 5|0 +|/ 19350248 19351040 19350760.556 19348773 19351653 + gene protein_coding_gene TRUE TRUE AT5G47720.1|AT5G47720.2|AT5G47720.3|AT5G47720.4|AT5G47720.5 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative|acetyl-CoA C-acetyltransferase Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.2); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.2); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); similar to peroxisomal acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95619.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); contains InterPro domain Thiolase; (InterPro:IPR002155) 0.695406551233633 7.53738163264499 1.43310833797588e-05 0.000369195202693715 11.5978279195720 13.8688626036690 0.695406551233633 0.0765812813017673 AT5G40650_at 8.43874768929464 8.6068654731997 9.22216089468412 9.15351481361854 9.01995849790894 8.6232465351762 8.42586887342538 8.29175173486828 7.16066182075979 7.62073371008054 8.2750463957372 8.54828696845742 8.14806872792171 8.29540972834375 8.42258006614238 7.90052287882022 8.28011495830108 8.33231638193986 7.52966346729024 0.141029854254445 0.137469720107471 0.138068034320189 0.147399319171859 0.140025445001562 0.141863227367103 0.137349816533853 0.137344323013093 0.148904597570549 0.146970682548920 0.146732162328065 0.138080351425575 0.134444715364274 0.139202673731478 0.139798944644374 0.133613293361477 0.145581982872988 0.145165045897432 0.143503414283292 5 5 + 16298956 16300488 16299603.545 16298632 16300755 + gene protein_coding_gene TRUE TRUE AT5G40650.1 SDH2-2 (succinate dehydrogenase 2-2) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. Identical to Succinate dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor (EC 1.3.5.1) (IP) (SDH2-2) [Arabidopsis Thaliana] (GB:Q8LB02;GB:Q9FM32;GB:Q9G3L9); similar to SDH2-1 (succinate dehydrogenase 2-1) [Arabidopsis thaliana] (TAIR:AT3G27380.1); similar to Os08g0120000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060876.1); similar to succinate dehydrogenase [Triticum aestivum] (GB:CAD62367.1); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Fumarate reductase, C-terminal; (InterPro:IPR012285); contains InterPro domain Succinate dehydrogenase/fumarate reductase iron-sulfur protein; (InterPro:IPR004489); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 0.701092669907193 7.53655133300657 1.43453760865508e-05 0.000369343953538359 11.5968635052449 16.5789207786477 0.701092669907193 0.0789902438648714 AT5G05270_at 0.736193632558214 1.17170360996934 1.01551090496944 1.23505892643029 1.22320255113599 1.55286387643374 2.34283062050384 2.12700143782447 0.960271910732776 1.53993102923233 2.92595413015105 4.31535903202973 3.54465305348047 3.39105625916917 3.40685081743871 3.23265185683344 2.76118352844637 2.06102204169834 1.41757693151593 0.320912021974661 0.295370346586191 0.299911617648573 0.294282878829797 0.299645391654288 0.299769193770549 0.294282878829797 0.294282878829797 0.299973563696856 0.294282878829797 0.302989708689774 0.329369475925024 0.296811792165161 0.305192999845654 0.311816906693104 0.296884434457803 0.305062662779804 0.294282878829797 0.29998931896307 5 0|5 /|+ 1563844 1564802 1564348.333 1563321 1565008 + gene protein_coding_gene TRUE TRUE AT5G05270.1|AT5G05270.2 chalcone-flavanone isomerase family protein similar to TT5 (TRANSPARENT TESTA 5), chalcone isomerase [Arabidopsis thaliana] (TAIR:AT3G55120.1); similar to Os12g0115700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065990.1); similar to putative chalcone isomerase 4 [Glycine max] (GB:AAT94362.1); similar to Os11g0116300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065587.1); contains InterPro domain Chalcone-flavanone isomerase; (InterPro:IPR003466) 0.780570727803648 7.52995303541824 1.44595068422310e-05 0.000372013639962258 11.5891961640625 3.68092967684463 0.780570727803648 0.108505287960606 AT5G39340_at 7.88133134546077 7.63297686857811 8.20947360352574 8.29572232308297 8.7070410844209 8.24456977220845 7.8907571257219 7.76667201854131 7.54041466140062 7.44584814815344 8.72755053084416 8.65802351188313 8.28991401670388 8.22948724506897 8.43329239245944 8.7333837876801 8.2654563695913 8.19327478256476 7.60810284431044 0.140946023329595 0.134345738759948 0.139085176776346 0.139372809598343 0.142177494375666 0.136915253589913 0.139989538221817 0.144190982197353 0.149538897765004 0.150316325724512 0.141932299502208 0.140850205134318 0.132599576714584 0.138451459743279 0.139773109868932 0.133177477468392 0.133811811163476 0.137057862750169 0.138468379571933 5 5|0 +|/ 15766175 15767443 15766930.778 15766079 15767735 + gene protein_coding_gene TRUE TRUE AT5G39340.1 AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase Encodes AHP3, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs) involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (APH2), AT5G39340 (APH3), AT3G16360 (APH4), AT1G03430 (APH5) and AT1G80100 (APH6). Identical to Histidine-containing phosphotransfer protein 3 (AHP3) [Arabidopsis Thaliana] (GB:Q9SAZ5;GB:Q9ZWM4); similar to AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2), histidine phosphotransfer kinase/ signal transducer [Arabidopsis thaliana] (TAIR:AT3G29350.1); similar to putative histidine-containing phosphotransfer protein 3 [Populus x canadensis] (GB:CAH56501.1); contains InterPro domain Hpt; (InterPro:IPR008207) 0.740554983939315 7.52956624228425 1.44662275310188e-05 0.000372013639962258 11.5887465242863 16.0649445414697 0.740554983939315 0.0945321482319452 AT5G58950_at 9.95049512759722 9.86169545430718 10.5236165817851 10.4770443071816 10.6698889106346 10.5359031912822 9.94602181418584 9.99309564451333 10.1764529893297 10.1181529320120 10.9103903517805 10.7577353955520 10.8174688924013 10.6265707809727 10.4450036331206 10.8468122855821 10.5979533300378 10.6209099569645 9.97563304049092 0.0855419745437703 0.0880787901358297 0.0882202514866819 0.0929073208232203 0.0888396447634041 0.0959684526963271 0.0855419745437703 0.091927179695096 0.0913749608032666 0.0920270839476746 0.090775282370547 0.0877202433042481 0.0888136768516563 0.0995403204588558 0.0909949251063046 0.0882803076905684 0.0956771299796604 0.0877081617891764 0.0901092773855351 5 5|0 -|/ 23818366 23819019 23818634 23818154 23820899 - gene protein_coding_gene TRUE TRUE AT5G58950.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G46930.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06446.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.61328108096361 7.52780248447494 1.44969162936757e-05 0.000372581846790158 11.5866959372535 20.6411877450587 0.61328108096361 0.0300848837383730 AT5G65120_at 2.88193253333201 3.22436840558104 3.41844661238377 3.47995591299318 3.51614842728344 3.48109329031348 2.78295794181755 2.95913169151911 2.44226598872654 2.7143538501199 3.22481063310252 3.57567462848004 3.45311542659046 3.53166236653901 3.58292984787811 3.38663532759532 3.19619431963687 3.27377667120509 2.54113424255499 0.193999422592457 0.196068275216727 0.191087178623921 0.187483079923074 0.196541268623472 0.187483079923074 0.191272288946804 0.194125115852961 0.192370649156389 0.191619713280166 0.187483079923074 0.198060262905671 0.187483079923074 0.189785758364129 0.190143968921872 0.189312636764004 0.191195742679138 0.195656472096671 0.187483079923074 5 5|0 +|/ 26030982 26031515 26031211.444 26030059 26031866 + gene protein_coding_gene TRUE TRUE AT5G65120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10110.1); similar to 52O08_25 [Brassica rapa subsp. pekinensis] (GB:AAZ67571.1) 0.674497646587827 7.52667203860746 1.45166225827143e-05 0.000372867289622095 11.5853814367874 6.20251331678406 0.674497646587827 0.0677596355737864 AT5G19000_at 8.82294470467591 8.761693780374 9.21003369069929 9.11151740719265 9.26631450838527 9.331095835119 8.2786017126171 8.34656322652611 8.69720525618912 8.27345466769479 9.21364320613094 9.1592149261584 8.99852322737564 9.20695242146575 8.86938800317847 9.3472140283282 8.92986839027376 8.85389561956353 8.62764723701069 0.123198047164462 0.139221926361328 0.135954010221735 0.123198047164462 0.148055092437387 0.123198047164462 0.133807187450599 0.141538563822448 0.138493908937043 0.148365273812395 0.123198047164462 0.127532926706925 0.134915081492848 0.134720139223759 0.127374645100723 0.123198047164462 0.131119011705491 0.126524537000329 0.140242664451235 5 5 + 6344149 6344611 6344377.429 6342269 6344796 + gene protein_coding_gene TRUE TRUE AT5G19000.1 ATBPM1 (BTB-POZ AND MATH DOMAIN 1); protein binding similar to ATBPM2, protein binding [Arabidopsis thaliana] (TAIR:AT3G06190.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAO37987.1); similar to Os07g0101400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058677.1); similar to Os07g0655300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060495.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.608428964239289 7.51940339584473 1.46440242188991e-05 0.000375916969814285 11.5769252914596 17.6936488739191 0.608428964239289 0.0258266455068724 AT5G14030_at 10.0641765199033 10.1592076632594 10.7631143851516 10.6957687128000 10.3596166508310 10.1997627938073 9.76624020224637 10.0010839302884 9.55101318101394 9.68706622445483 10.4658169151997 10.6348133821409 10.1562257904009 10.2213697763136 10.8210020343815 10.1421061033162 9.65199029099156 10.3374422453084 9.32371476169002 0.109876455881152 0.106454972005718 0.114051945307685 0.109621655246445 0.107606210429068 0.112970684498163 0.115032661309394 0.110682951257727 0.132715522184483 0.119646713162625 0.106454972005718 0.10810994559174 0.114205574827750 0.119640016314662 0.107010531977646 0.106454972005718 0.118202105241853 0.109291801016563 0.123256864962364 5 5|0 +|/ 4526920 4528204 4527626.556 4526786 4528411 + gene protein_coding_gene TRUE TRUE AT5G14030.1 translocon-associated protein beta (TRAPB) family protein similar to translocon-associated protein beta family protein-like [Solanum tuberosum] (GB:ABB87132.1); contains InterPro domain Translocon-associated beta; (InterPro:IPR008856) 0.645068159130061 7.51794152855138 1.46697926026402e-05 0.000376355625304248 11.5752237466438 20.163343293774 0.645068159130061 0.0531340356281215 AT5G01810_at 5.19443664847476 5.37779604030969 6.00709088808297 6.28773309903566 6.6140109004321 6.9079184402241 7.45808512807096 7.75141157091255 7.90248762275409 7.71015495784457 9.74567173544933 9.77781042049423 9.5955417728316 9.62606787153716 8.79282117663795 9.8040859689435 7.9745384481375 8.92811142797666 7.8604807275831 0.229852537587108 0.219328372222452 0.219534072058926 0.209726745631036 0.207221198544957 0.212970651696442 0.212730697221315 0.206523030989275 0.213221991978454 0.203087312778858 0.20656759001162 0.212079821992226 0.20694723547464 0.214084569673662 0.203087312778858 0.211707292503284 0.208424932796436 0.207490447138505 0.203087312778858 5 5 + 311132 311697 311435.545 309431 312094 + gene protein_coding_gene TRUE TRUE AT5G01810.1|AT5G01810.2 CIPK15 (CBL-INTERACTING PROTEIN KINASE 15); kinase/ protein kinase|CIPK15 (CBL-INTERACTING PROTEIN KINASE 15); kinase Encodes a CBL-interacting serine/threonine protein kinase, also has similarities to SOS2 kinase. Identical to CBL-interacting serine/threonine-protein kinase 15 (EC 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) (CIPK15) [Arabidopsis Thaliana] (GB:P92937;GB:Q9LZW5); similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to CBL-interacting protein kinase 22 [Populus trichocarpa] (GB:ABJ91228.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.73248132584606 7.50743476528578 1.48564411477415e-05 0.000380918724702884 11.5629860129184 15.0022881088486 0.73248132584606 0.092353935257961 AT5G24980_at 10.6388598574610 10.6880799552519 11.1584810386515 11.2643054872937 10.9501826467208 10.4904032647372 10.2544530601616 10.1206199903440 9.50658722116627 9.81402361774604 10.751971967888 10.8078120229198 10.8310498152534 10.4995130413601 10.6692678411244 10.5637938940277 10.7929605742475 10.5619933746541 10.0713676147667 0.217573052490420 0.199075958771550 0.192418452561378 0.212866817635503 0.192418452561378 0.217341252836572 0.192418452561378 0.192418452561378 0.263257266897194 0.192418452561378 0.192418452561378 0.192418452561378 0.192418452561378 0.221458068683453 0.192418452561378 0.192418452561378 0.224759325340107 0.237803493741383 0.192418452561378 5 5|0 +|/ 8609098 8609154 8609126 8609084 8609531 + gene protein_coding_gene TRUE TRUE AT5G24980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10745.1) 0.713904529377122 7.50632970526143 1.48762205003354e-05 0.000381200437736545 11.5616980432379 20.9367338964081 0.713904529377122 0.085295026144805 AT5G57870_at 9.64119244590286 9.39739630421932 10.2238020111792 10.2146398246290 10.1030012989116 10.026472028932 9.5877933380369 9.60158687955728 8.92719720625851 9.262255555729 9.81634778538193 9.8602271502428 9.94117912577108 9.60229098617136 9.69214462420286 9.6663220822733 9.85308445385292 9.79960805803033 9.12560465241194 0.0716160483829875 0.0711625379130743 0.0707675859479372 0.0714198431580867 0.0725217991526544 0.0748386817671648 0.074325053435068 0.0771800674495222 0.0898506524790438 0.0754448916631073 0.0758502356208285 0.0707837047926577 0.0710324731710252 0.0707675859479372 0.081995624415108 0.0724174088707769 0.0729150616852352 0.075951412106164 0.0795757255571442 5 5 + 23460073 23460613 23460341.455 23456724 23461007 + gene protein_coding_gene TRUE TRUE AT5G57870.1|AT5G57870.2 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative similar to MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G24050.1); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE79486.1); similar to Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) (GB:Q03387); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE78808.1); contains InterPro domain Initiation factor eIF-4 gamma, middle; (InterPro:IPR003890); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) 0.629433972045763 7.50319657785608 1.49324546307299e-05 0.000382415413236355 11.5580454370317 19.291445352108 0.629433972045763 0.0443126379906357 AT5G52840_at 9.79443014574332 9.81997200515898 10.3464475351615 10.3889675413127 10.0888205249350 10.0632858428393 9.92539595880802 9.95698764092976 9.38033879011901 9.66185204498073 10.3077089087021 10.4222132806908 10.1220469292828 10.4110359717760 10.6435998930808 10.2761043264088 10.0532919250789 10.2387439630102 9.34664759347882 0.0927382416308848 0.0927382416308848 0.0987674858656065 0.0954482252007767 0.0986739317758605 0.113555272950437 0.0956107665803504 0.0938653156295471 0.110921269305578 0.101327104688810 0.09764001698444 0.0929841145407804 0.0961147974189408 0.0951876739106755 0.0988184172341351 0.0927382416308848 0.099976618959609 0.0983749781762519 0.104990944317791 5 5 + 21430946 21431990 21431455.455 21430872 21432232 + gene protein_coding_gene TRUE TRUE AT5G52840.1 NADH-ubiquinone oxidoreductase-related Identical to Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) [Arabidopsis Thaliana] (GB:Q9FLX7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28005.1); similar to NADH-ubiquinone oxidoreductase [Retama raetam] (GB:AAL32032.1); contains InterPro domain ETC complex I subunit; (InterPro:IPR006806) 0.5970404651482 7.49732772700913 1.50384082297038e-05 0.000384901502412795 11.5512000036304 19.9341830456677 0.5970404651482 0.0110949390861488 AT5G52010_at 6.99611324552449 7.10015070388002 7.70940363518813 7.50862074967108 8.0115742799056 7.5968054424206 7.53352578346917 7.22238324234499 6.93399110245649 7.27699317011555 7.8591135722455 8.41809323132182 7.77490975850552 7.9646383798984 8.35383989723578 8.217134011409 8.24875241860409 8.02453070771821 7.12494601117998 0.205885424266912 0.190546919709877 0.196584292742861 0.192709972980564 0.197132030031626 0.191810227297433 0.201444843492866 0.197808146229359 0.221798399386773 0.198831198311043 0.193695385321703 0.194220594089210 0.197753317739144 0.194518380014453 0.198054558165276 0.190546919709877 0.192180275655097 0.19556205868947 0.190792836562541 5 5 - 21138933 21139427 21139190.727 21138718 21140211 - gene protein_coding_gene TRUE TRUE AT5G52010.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G12240.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE86261.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.744603759429152 7.47687810341816 1.54139794227088e-05 0.000394281331690093 11.5273116906815 15.0696237644845 0.744603759429152 0.097891507454658 AT5G42650_at 10.0134455404166 10.0604502856646 9.99604325221521 10.0193764815014 10.1063954261525 9.9564708665223 10.4269282911944 10.4831057588032 8.68625740594785 10.0838051354562 11.0327987384670 11.2031724551290 11.0324194982578 10.7829192268514 10.8775887709437 10.9044692313869 10.6052403106051 10.7400215805715 9.5959065905049 0.0937699943794278 0.089685511884123 0.0899540909581233 0.0922268861417495 0.0965532158216438 0.0902298776049109 0.095169317689133 0.0922885159195985 0.106763222098041 0.096747922014918 0.0911078800107417 0.0927602892642643 0.0893856098285162 0.0940231976462398 0.0944988946421611 0.0909853341594922 0.0940842160222139 0.0904563734157031 0.0936691507133352 5 5 - 17115067 17115548 17115311.091 17114823 17116623 - gene protein_coding_gene TRUE TRUE AT5G42650.1 AOS (ALLENE OXIDE SYNTHASE); hydro-lyase/ oxygen binding Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. Identical to Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase) (Hydroperoxide dehydrase) (CYP74A) [Arabidopsis Thaliana] (GB:Q96242;GB:P93720;GB:Q9ZR51); similar to HPL1 (HYDROPEROXIDE LYASE 1), heme binding / iron ion binding / monooxygenase [Arabidopsis thaliana] (TAIR:AT4G15440.1); similar to allene oxide synthase [Hevea brasiliensis] (GB:AAY27751.1); similar to allene oxide synthase [Solanum tuberosum] (GB:CAD29735.1); similar to allene oxide synthase [Citrus sinensis] (GB:AAO72741.1); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain E-class P450, group IV; (InterPro:IPR002403) 0.607797360067506 7.47219733422513 1.55013601713475e-05 0.000396109087918541 11.5218359855573 20.3091028730569 0.607797360067506 0.0291571005944114 AT5G14520_at 7.4991104126655 7.84188316730953 8.35257904074423 8.34412348778917 8.2209107953115 8.25152023465077 7.37734354805398 7.66506838842977 6.10797536601986 6.29873356119581 6.46160989727967 7.13565184251213 7.26238942189797 6.82678061515204 7.22189692133251 7.52299744982942 7.4226412338091 6.99371790713201 6.84919805693191 0.201048339637462 0.215141484134775 0.208815910977343 0.217499347086119 0.202883812318213 0.226622810093185 0.209927765223412 0.205992397100733 0.259346786096821 0.217898239147994 0.208869365199794 0.201653443134067 0.201048339637462 0.207918269739767 0.205632214393550 0.203844632973784 0.222281873028686 0.218271775828513 0.210318297524058 5 5|0 -|/ 4681060 4681654 4681358.333 4680699 4684333 - gene protein_coding_gene TRUE TRUE AT5G14520.1 pescadillo-related similar to BRCT; Pescadillo, N-terminal [Medicago truncatula] (GB:ABE82103.1); similar to Os03g0699200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050986.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain Pescadillo, N-terminal; (InterPro:IPR010613) 0.691878505122403 7.47207210035672 1.55037053678347e-05 0.000396109087918541 11.5216894430172 14.7063655456196 0.691878505122403 0.0776410437216458 AT5G10380_at 11.5174202049743 11.808645855642 12.6008520324755 12.7534655956486 12.4622503594320 12.4289758264548 10.7448925079780 11.0192071090172 11.4899480417352 10.7017348539609 10.9597457784775 10.4704800326604 11.3029917441070 11.1546214681774 10.3196445637139 11.1508089350089 11.1465046662392 10.9824645714907 10.3814343153630 0.131211950727537 0.124289442341834 0.130154658376602 0.126133160509787 0.132919037534082 0.126209095101613 0.123831278710119 0.124210858168448 0.125666887829519 0.124729834492133 0.124131490126596 0.126085392997942 0.121915991693856 0.118786379097483 0.127860426225294 0.123638314593505 0.131139944699073 0.123708862413548 0.127072087840262 5 5 + 3268156 3268696 3268393.909 3267636 3268814 + gene protein_coding_gene TRUE TRUE AT5G10380.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5F (ATL5F) [Arabidopsis Thaliana] (GB:Q9LX93); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G72220.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE93076.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.683523258532271 7.46524708812513 1.56320947664345e-05 0.000399154137771586 11.5136999798258 22.8137704149548 0.683523258532271 0.0743247064342933 AT5G05660_at 4.59734611513571 5.00099397782358 5.4282344331818 5.51092662163619 5.48786187378574 5.57393072250327 4.58506427957745 4.71112094780024 5.41109421435115 5.65841709010636 6.3509846530659 6.2089843088943 5.73618019206941 5.9503855365441 6.18787484995472 5.91326417717907 6.33651861224425 5.97844337022614 5.3881673054413 0.244279023907802 0.230056777103280 0.226097825855456 0.232905711299003 0.234771375435764 0.235112857790469 0.225124956090857 0.250934170550850 0.229878605070937 0.227560916260016 0.237351094437407 0.23492132434845 0.222686062415368 0.226281016567327 0.233203044198413 0.233639839494049 0.247725300799346 0.239586511714174 0.222686062415368 5 5|0 -|/ 1691399 1691874 1691685.833 1690857 1695468 - gene protein_coding_gene TRUE TRUE AT5G05660.1 transcription factor similar to NF-X1 type zinc finger family protein [Arabidopsis thaliana] (TAIR:AT1G10170.1); similar to MGC154926 protein [Xenopus laevis] (GB:AAI26052.1); similar to PREDICTED: similar to nuclear transcription factor, X-box binding-like 1 [Strongylocentrotus purpuratus] (GB:XP_786259.2); similar to PREDICTED: similar to CG15011-PA [Rattus norve (GB:XP_001077093.1); contains InterPro domain Zinc finger, NF-X1-type; (InterPro:IPR000967) 0.686771837624234 7.45750221892037 1.57791786968551e-05 0.00040267267337859 11.5046261774114 10.8962960376747 0.686771837624234 0.0760393066216894 AT5G55160_at 9.81301743095805 10.0786193741294 10.5978034438344 10.7274163713735 10.8428109401565 10.6850846436618 9.71480266126865 10.0661280181193 10.0516093247200 9.9813624712972 10.7703891062481 10.6860824803555 10.6726934787680 10.9209975038431 10.3900767411107 10.7633422344520 10.5569125131895 10.5858459354919 10.1220247896985 0.134753032014319 0.121755665668663 0.126273493541517 0.129458736794718 0.126997488743756 0.133936949020040 0.1213424815926 0.124442144069014 0.129587693877627 0.128368788055025 0.124913363389656 0.126045932747419 0.127827373256995 0.125220756796201 0.131180510847103 0.126838666865038 0.128355008854007 0.127612631413023 0.120714301811106 5 5|0 -|/ 22400990 22401949 22401223.3 22400786 22402151 - gene protein_coding_gene TRUE TRUE AT5G55160.1 SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. similar to SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1) [Arabidopsis thaliana] (TAIR:AT4G26840.1); similar to ubiquitin-like protein SMT3 [Phaseolus vulgaris] (GB:AAM21576.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.70588197462406 7.45601841944295 1.58075277560565e-05 0.000403158828034202 11.5028868588583 20.6756893743148 0.70588197462406 0.0840074778572526 AT5G27240_at 3.07485053270352 3.06156873494651 3.35785948680882 3.31382596173025 3.5312233612682 3.55799087263978 2.84745885614807 2.98677116392319 2.95178887251023 2.26617414917531 3.51486945205048 3.43868705349976 3.77696092626162 3.7906601226462 3.18689727673108 3.20657369458818 3.47555930861672 3.47756541584631 2.95822238674026 0.196321626765504 0.190658104227369 0.190147395556833 0.187876555301430 0.193640096994960 0.186677578286878 0.195547215672916 0.190733724068782 0.204873267423258 0.194257059361364 0.186426149175581 0.186965263570743 0.191968815823290 0.18940015502287 0.194988142659141 0.186426149175581 0.186426149175581 0.192076214156188 0.190148029797573 5 5 + 9600343 9600810 9600617.182 9597555 9600869 + gene protein_coding_gene TRUE TRUE AT5G27240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G04980.1); similar to heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] (GB:ABF69988.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.602819559409777 7.4502892663915 1.59175039910759e-05 0.00040571825293599 11.4961683469014 6.32087701748203 0.602819559409777 0.0258076532384363 AT5G44710_at 5.97226399718094 6.47215671674663 6.71501221979303 7.15359977668861 6.86230712030456 7.49786575840908 5.42100846235406 6.10053736429229 5.59467063121211 5.4372006756775 7.17262444232228 6.8149643029108 6.54682433594383 6.73987684985832 6.49928003649332 6.79871869385839 6.46509431799688 6.71682945382161 5.82972359608825 0.222579417317223 0.221295008192629 0.234283320930608 0.239928455637556 0.233550351965178 0.222455884497431 0.229520055302333 0.229378348634747 0.234292730855300 0.236019237840563 0.220870609500951 0.226002813685431 0.228259987031543 0.226784647810736 0.227455251413856 0.222933747610775 0.228453653129087 0.237645427689380 0.242256042893286 5 5 + 18058855 18059510 18059057.444 18058137 18059787 + gene protein_coding_gene TRUE TRUE AT5G44710.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54919.1); similar to Os05g0148300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054647.1); contains InterPro domain Ribosomal protein S27, mitochondrial; (InterPro:IPR013219) 1.08222475174003 7.4498175419431 1.59265958659442e-05 0.00040571825293599 11.4956149653021 12.6942480212095 1.08222475174003 0.197914780709454 AT5G03415_at 5.05554564073184 5.4749514362555 5.53528414135939 5.75672619659951 6.53490583615163 6.00479057753767 4.77658955455833 5.03123735150912 4.67465413058275 4.38438313399945 5.83686338332655 5.8148556240737 5.65920365313993 5.12910778070658 5.56377642335008 5.65380532289386 5.02350467083535 4.88079241538392 4.8503272248350 0.217665585734019 0.215879716110384 0.227447945395354 0.220999153472182 0.229024508872962 0.236882125628946 0.215879716110384 0.218525713127947 0.227216304562688 0.220681774507814 0.217676108874997 0.219588262313376 0.215879716110384 0.233521753718121 0.215879716110384 0.220754360037681 0.236562794416372 0.216661817775226 0.215879716110384 5 5|0 +|/ 844334 845109 844826.7 842499 845414 + gene protein_coding_gene TRUE TRUE AT5G03415.1 DPB Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. similar to DPA, transcription factor [Arabidopsis thaliana] (TAIR:AT5G02470.3); similar to transcription factor DP1 [Populus tremula x Populus tremuloides] (GB:AAQ13675.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.841064760778183 7.44643351079565 1.59919831050163e-05 0.000407144729031998 11.4916442729962 10.5621005863476 0.841064760778183 0.130745689561408 AT5G44320_at 8.33907885158168 8.71622762680499 8.96006451448525 9.17067891370961 9.19486635664672 9.05849091456614 8.23626686303164 8.30239971959056 7.99328267235078 7.9853438011867 8.90347409828352 9.0534652296108 8.9750473426907 8.61836100458942 8.94751879167017 8.86194449975769 8.6553848548433 8.54552469927562 8.41570422584246 0.122834111822983 0.119231403218175 0.125737530330138 0.125036138973622 0.125739626600279 0.127281513728472 0.129903950173335 0.119231403218175 0.136658868327769 0.128507057521782 0.122776927475517 0.119491947074155 0.121250930545932 0.132859137624025 0.125002004908116 0.122273840878738 0.129241057829288 0.127255469479439 0.12971314421761 5 5 - 17872163 17872662 17872369.182 17871816 17873907 - gene protein_coding_gene TRUE TRUE AT5G44320.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G20980.3); similar to eukaryotic translation initiation factor 3 (eIF-3), putative [Musa acuminata] (GB:ABF69959.1); similar to Os05g0566500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056343.1); similar to putative eukaryotic translation initiation factor (eIF3d) [Oryza sativa (japonica cultivar-group)] (GB:AAU10658.1); contains InterPro domain Eukaryotic translation initiation factor 3, subunit 7; (InterPro:IPR007783) 0.693089204114943 7.44453970906504 1.60287020014857e-05 0.000407840083196273 11.4894214894055 17.2230260358271 0.693089204114943 0.0792226483577727 AT5G47940_at 3.70647280949029 4.44211517029878 4.67919863424223 5.42349992305886 5.26319149126209 4.52018739128072 3.27118529489383 3.63034525630359 2.88856485018413 2.77377162803571 4.20099973474501 4.56703654985908 4.08127066849607 4.53813537427917 3.96335144806909 4.43324406058808 3.82319783127383 3.84182383744895 3.25201120765013 0.224508251699509 0.221757457304284 0.228752342238898 0.232163332088408 0.228722407384273 0.2320942276687 0.230162383061090 0.221757457304284 0.246770789954129 0.225542372621324 0.225902109300824 0.227984418507913 0.228252306502988 0.221757457304284 0.221792986994618 0.224125172924372 0.235343393914623 0.223130190354312 0.221757457304284 5 5 - 19426663 19427208 19426879.727 19426468 19429119 - gene protein_coding_gene TRUE TRUE AT5G47940.1 similar to hypothetical protein AaeL_AAEL003671 [Aedes aegypti] (GB:EAT44992.1); similar to Os07g0569000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060035.1) 1.20933646834297 7.44233281199567 1.60716062583697e-05 0.000408691911933865 11.4868306149311 7.94331532971292 1.20933646834297 0.2306374669915 AT5G56250_at 6.42306494405622 7.46963520018742 7.55948585080703 7.74605216388779 7.6618500105118 7.35759816890354 5.8906809037633 5.73004567394826 6.54232048212319 6.3247517126651 7.4681283273519 7.13014691633449 7.42956212320075 7.58166261042578 6.76343604417562 7.32605215910312 7.3339181217334 7.46922941164535 6.29877853411556 0.215743597413536 0.211399958488082 0.221452882185195 0.219919408275077 0.214892315704127 0.216343444235127 0.21964480608621 0.230649254711356 0.23593846397305 0.21809513779397 0.214242374134149 0.213297599343387 0.216113808347167 0.212200362986008 0.219860568143594 0.210064065286847 0.236232206549551 0.210064065286847 0.211617291505634 5 5 - 22786144 22786636 22786370.545 22785803 22790122 - gene protein_coding_gene TRUE TRUE AT5G56250.1|AT5G56250.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56240.1); similar to Os04g0471400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053056.1); similar to hypothetical protein MtrDRAFT_AC146329g11v1 [Medicago truncatula] (GB:ABE91348.1) 1.06351996132521 7.4406911837428 1.61036014616797e-05 0.000409265493554173 11.4849029369637 13.8304935514486 1.06351996132521 0.193364032422432 AT5G04150_at 3.08313790761751 3.16892290317095 3.03773437758521 2.77087588214833 7.29054097637069 7.25604254035654 2.38926998307441 2.55658301510223 2.51355131451470 4.53732402765939 1.44177789089994 2.70729532245623 5.0192141654822 3.28941558881703 1.75590063015031 4.38943539944698 4.4069068659413 1.86284151618128 5.27667294302857 0.284734578780571 0.27757628392826 0.27757628392826 0.281167491091477 0.286673141830789 0.302847792216115 0.280078794479946 0.27757628392826 0.280128058201389 0.285720384324854 0.290472631794420 0.281464652088564 0.306935842473818 0.280366299744564 0.303721899257822 0.27757628392826 0.287492964709579 0.281548828643133 0.279552745044176 5 5|0 -|/ 1138568 1139243 1138888.2 1138560 1139477 - gene protein_coding_gene TRUE TRUE AT5G04150.1 basic helix-loop-helix (bHLH) family protein similar to ORG2 (OBP3-responsive gene 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56970.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE94188.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.644617826280803 7.43598843841078 1.61956384648990e-05 0.000411243313146001 11.4793787501887 7.5532790402563 0.644617826280803 0.0568073686823934 AT5G47090_at 5.78661033088025 6.0251415538553 6.61957969897562 6.8477866346548 7.19507802766553 6.53491553304169 5.94958762413582 5.95177141282844 5.86604737228805 5.68067856438649 6.66906199898564 6.66313469886524 6.7571060780504 6.55978591248727 6.40568421008605 6.61212357639881 6.38048334042109 6.42513313664731 5.76300646413064 0.188943802068913 0.185799581211557 0.190950571392773 0.201889825895731 0.197675221649346 0.193635071784993 0.194461692207327 0.187837811014399 0.191512175126343 0.191156077993251 0.190773348585125 0.187824829268766 0.197101487968434 0.186408015154998 0.192395284524526 0.188067058066644 0.200460227838365 0.186804433335903 0.195574288403929 5 5 + 19145163 19145671 19145403 19144486 19145996 + gene protein_coding_gene TRUE TRUE AT5G47090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03710.1); similar to hypothetical protein 26.t00106 [Brassica oleracea] (GB:ABD65045.1) 0.830107780941893 7.43574623882163 1.62003938669815e-05 0.000411243313146001 11.4790941646468 12.5282963116352 0.830107780941893 0.127732025783916 AT5G03740_at 6.82451553122502 6.88540414090668 7.74429949621718 7.45964781613365 7.63797976181603 7.72454889348237 6.57984705389405 7.1817309773218 6.46484041183056 6.55434369365748 7.3348433211873 7.34805713717363 7.44922487427132 7.32971156356332 7.60411466284063 7.45118880324289 7.05030731031553 7.23500853181556 6.58331960880785 0.191699924546925 0.173806507187623 0.185918382132356 0.180181815247591 0.170848390756535 0.183714550079221 0.179102609269196 0.180897406197608 0.18021916270207 0.179063011572719 0.175172279590058 0.170721494279243 0.181951579195498 0.184021175157308 0.173400621833292 0.178108731397837 0.190890985761741 0.170117452984410 0.171197608211579 5 5 + 983570 983936 983796.111 981875 984199 + gene protein_coding_gene TRUE TRUE AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); nucleic acid binding / zinc ion binding HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression Identical to Histone deacetylase 2c (HD-tuins protein 3) (HD2C) [Arabidopsis Thaliana] (GB:Q9LZR5;GB:Q9M4T4); similar to HD2A (HISTONE DEACETYLASE 2A), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G44750.1); similar to putative histone deacetylase HD2 [Oryza sativa (japonica cultivar-group)] (GB:AAU10714.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.794941843430698 7.43210332552235 1.62721016141308e-05 0.000412821898991649 11.4748127770454 14.1969841740329 0.794941843430698 0.116666630726389 AT5G43760_at 9.1851443432281 9.41632757041765 9.61304958753608 9.7835409565571 10.6413214113365 10.2846615041128 9.68061713610752 9.79006540997638 10.0734842725571 9.76337962409006 11.3835607836379 11.1713703498315 10.8888937406493 11.083626650489 10.7113879425184 10.6233857079617 9.76907613885444 10.7319115476956 10.0550533723428 0.112580489652252 0.109609905697345 0.122018834443531 0.112914733740185 0.113927510751803 0.118497789351056 0.114037075128843 0.112197881933242 0.118025856773252 0.115742069803064 0.116240020635878 0.114705911240243 0.113015698692455 0.125267596062380 0.115024099633800 0.113735536836022 0.131042060393298 0.118717200078193 0.117258270093994 5 5 + 17605114 17605682 17605354 17602990 17605824 + gene protein_coding_gene TRUE TRUE AT5G43760.1 beta-ketoacyl-CoA synthase, putative Identical to 3-ketoacyl-CoA synthase 19 (EC 2.3.1.-) (KCS-19) (Very-long-chain fatty acid condensing enzyme 19) (VLCFA condensing enzyme 19) (KCS19) [Arabidopsis Thaliana] (GB:Q9FG87;GB:Q94CA1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT2G16280.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT1G04220.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT2G26640.1); similar to fatty acid elongase 1-like protein [Limnanthes douglasii] (GB:AAG28600.1); similar to putative fatty acid elongase [Zea mays] (GB:CAC01441.1); similar to beta-ketoacyl-CoA synthase (GB:AAC49186.1); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) 0.697016967330641 7.42812950104836 1.63507136292743e-05 0.000414284027866109 11.4701404509517 20.1790280052597 0.697016967330641 0.081482509681562 AT5G22530_at 2.46686094034746 2.54891236276138 4.43365666690805 4.47141161263745 2.67568929855132 2.86937827483254 2.14793936793305 1.90430064208773 2.41906658786186 2.69259948429767 2.74908843533143 2.17901600052799 2.37716264601987 2.53044386564174 2.34830541871577 2.84885666851021 2.44689820977257 2.60526015868107 2.60131186736209 0.212863683895767 0.205785929811327 0.231451027780600 0.235541030985337 0.212249472676450 0.214609802353577 0.207725256125674 0.214853993897469 0.211345835192063 0.215472271928827 0.206219174169733 0.214063709373883 0.210091451617099 0.207297537093053 0.211001750004319 0.206585978617052 0.20382277516771 0.209882302419010 0.213744281839954 5 5 + 7480629 7481021 7480845.818 7480530 7481197 + gene protein_coding_gene TRUE TRUE AT5G22530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22520.1) 0.642583456921407 7.42777315455764 1.63577830233026e-05 0.000414284027866109 11.4697213638879 5.48057943171102 0.642583456921407 0.0560849634781144 AT5G05300_at 4.08999563000781 3.86769662954557 5.49444915657006 5.73426414910913 4.27426058821288 3.62313282357271 2.47217670723759 2.36023427642418 3.83915492806861 2.65454621001772 2.21869516723454 4.44759677958752 2.73665837777373 3.54704581336392 3.38479332584614 2.43199900350188 2.58416215771253 3.09984087564002 2.45528733120043 0.302436842427546 0.300453943061211 0.301140665577876 0.309741384416192 0.300136722533124 0.299613550409693 0.299008561246332 0.300013300926904 0.315822593122108 0.293385774790443 0.293385774790443 0.29781554711763 0.296901270213572 0.293385774790443 0.29483617539214 0.298198219014167 0.293385774790443 0.297633483746086 0.293385774790443 5 5 - 1570114 1570364 1570234.818 1570103 1570411 - gene protein_coding_gene TRUE TRUE AT5G05300.1 unknown protein 0.82867682485801 7.42754592707375 1.63622926058447e-05 0.000414284027866109 11.4694541204250 7.00919879209072 0.82867682485801 0.127571521243963 AT5G02280_at 6.8607687117585 6.87918326436723 6.97477066766297 7.32128806062366 7.36754256492334 7.47546628782415 7.3605034677836 7.52169824614671 6.73367707884545 6.77951453140523 8.0968272115114 8.24330949025916 7.99234876019753 8.14153799482317 8.18352808909796 8.0228356777843 7.9604185401149 8.1606937465912 7.16822131655188 0.167731169321215 0.164565137142371 0.166478416287596 0.160558420027421 0.162190510018032 0.167724512218926 0.164364012797200 0.171370219831175 0.184453859459027 0.164265198957531 0.161078938831249 0.167017346742904 0.159817981378309 0.170112909287580 0.164672412688698 0.165847945462445 0.173187877060057 0.171380844019707 0.172834367132163 5 5|0 +|/ 469375 470097 469901.3 469296 470283 + gene protein_coding_gene TRUE TRUE AT5G02280.1 synbindin, putative similar to synbindin, putative [Arabidopsis thaliana] (TAIR:AT1G51160.2); similar to hypothetical protein DDBDRAFT_0204749 [Dictyostelium discoideum AX4] (GB:XP_641000.1); similar to Os07g0454700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059557.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sybindin-like protein; (InterPro:IPR007233) 0.667805801303894 7.4272607300467 1.63679545560899e-05 0.000414284027866109 11.4691186888638 14.7171485327521 0.667805801303894 0.0687975950393117 AT5G66010_at 6.84200301091255 6.04814461940248 7.45838795306243 7.09086253661025 7.34724992718982 6.8282668196692 5.41530895204773 5.07553013407165 5.27346644550401 5.85573571710060 6.50004032577008 6.51674569504043 6.5398242130091 6.76406607100531 6.19088341590055 6.56727888587845 6.92196701702141 6.14353283489182 6.24408715281281 0.192531127262350 0.188182244805412 0.198039781968276 0.202519651399975 0.194197981075936 0.206273146664185 0.194067701122784 0.190515911955362 0.193442230737146 0.192267527559241 0.184166432657692 0.181110051287922 0.181110051287922 0.186141697411507 0.188973120795866 0.181110051287922 0.19946006454262 0.182691808949626 0.191792797332307 5 5 + 26417386 26417944 26417595.182 26416754 26418225 + gene protein_coding_gene TRUE TRUE AT5G66010.1 RNA binding similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G20890.1); similar to Os12g0131000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066073.1); similar to Os11g0133600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065670.1); similar to heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96396.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.03144549943325 7.42149379795397 1.64828986271541e-05 0.000416949936891852 11.4623336278960 12.6677886170143 1.03144549943325 0.185586841394134 AT5G07350_at 8.6667664480165 8.63283136262377 9.07054620187965 9.25305037612024 9.04860930285171 8.93822907707305 8.4432810463896 8.42091907213927 8.4616183254562 8.59105691695746 9.25890222820844 9.78319459099296 9.03675628424514 9.01952227047396 9.1025914545464 9.08095791322513 9.2309490903114 9.31437633661015 8.5631292939016 0.137117674375521 0.142867860580629 0.139543002971609 0.144843885735189 0.136595198874798 0.149884003825746 0.143148899181927 0.136595198874798 0.139166924993523 0.143724299051999 0.145308430483750 0.138830748024175 0.139774746783701 0.156008799357479 0.142916590342958 0.139219810001545 0.140188491266903 0.139741433117867 0.150385888471221 5 5 - 2320350 2320778 2320545.714 2320082 2325420 - gene protein_coding_gene TRUE TRUE AT5G07350.1 tudor domain-containing protein / nuclease family protein similar to tudor domain-containing protein / nuclease family protein [Arabidopsis thaliana] (TAIR:AT5G61780.1); similar to Tudor; Staphylococcus nuclease subtype [Medicago truncatula] (GB:ABE80217.1); similar to RNA binding protein Rp120 [Oryza sativa (japonica cultivar-group)] (GB:AAP85377.1); similar to 110 kDa 4SNc-Tudor domain protein [Pisum sativum] (GB:BAC06184.1); contains InterPro domain Maternal tudor protein; (InterPro:IPR008191); contains InterPro domain Staphylococcus nuclease subtype; (InterPro:IPR006022); contains InterPro domain Tudor; (InterPro:IPR002999); contains InterPro domain Staphylococcus nuclease (SNase-like); (InterPro:IPR006021) 0.613232008080244 7.42086747748737 1.64954344911946e-05 0.000417023738594832 11.4615964641884 17.6927830024776 0.613232008080244 0.0375744740124710 AT5G20660_at 9.22092454688362 9.27700132165068 9.82540633020188 9.67076042551055 9.85718599495701 9.64690036882847 8.86325686869413 8.75972883470213 9.06884773967974 9.19788071612809 9.8366138319009 9.75777089433313 9.61594737762196 9.62261552481283 9.57976210925144 9.47643123147526 9.60005479983698 9.7976059537184 9.09392205447761 0.114802951114133 0.114593250327249 0.119288403190421 0.112785529082845 0.105437056466510 0.111289378829206 0.116530364905668 0.115378419607273 0.118413467139029 0.105849326321705 0.107767672922714 0.108824350824057 0.109005393257668 0.122365296250956 0.118911479234299 0.108538067620358 0.115835105336194 0.112627351073073 0.108518429452884 5 5 + 6990492 6990884 6990722.818 6986237 6991045 + gene protein_coding_gene TRUE TRUE AT5G20660.1 24 kDa vacuolar protein, putative similar to peptidase [Arabidopsis thaliana] (TAIR:AT1G67420.1); similar to OSJNBb0061C13.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE05634.1); similar to 24 kDa vacuolar protein VP24 [Ipomoea batatas] (GB:BAA83809.1); contains InterPro domain Peptidase M28; (InterPro:IPR007484) 0.630234382749443 7.41537098143284 1.66058894552503e-05 0.000419571520230775 11.4551249635193 18.7806791124939 0.630234382749443 0.0495547276685513 AT5G63700_at 6.17669398820538 6.26864320190456 7.66051701636862 7.30866750850465 7.97304853317845 7.38789226239642 7.71373610662551 7.17645135326167 6.6669886852666 6.84872211855163 8.10468701717284 7.92658664699461 7.90271225414267 7.57165497365349 7.7046461214181 7.86276737199704 8.01803355389429 7.9012681731959 6.91964748296522 0.152582802998171 0.162201222903359 0.150201037064565 0.146564003460062 0.145097670450140 0.150912071482905 0.150729530595112 0.143255753092345 0.171191408131750 0.153384646213334 0.146808113116236 0.143255753092345 0.149273207400509 0.156101420376123 0.149582362253092 0.143255753092345 0.145532868399702 0.154761255679713 0.155821424101221 5 5 - 25511173 25512449 25512014.545 25511160 25514858 - gene protein_coding_gene TRUE TRUE AT5G63700.1 zinc finger (C3HC4 type RING finger) family protein similar to SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08430.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT44245.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Plus-3; (InterPro:IPR004343); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) 0.905454293038445 7.40854314434932 1.67442104748646e-05 0.000422819999795212 11.4470803044288 14.5511215511322 0.905454293038445 0.151196256528173 AT5G02310_at 5.63879297123011 6.09918751120238 6.3647154439193 6.48429622752431 6.94333729368149 6.38981817274866 5.11090844402275 5.50893817417696 5.5555705733347 5.47022930594342 6.36529302517779 6.27539380931521 6.66093026857328 6.25937196838024 6.31329622458317 6.48991028437868 6.3441803159311 6.00521976748997 5.58596766046723 0.151348192915331 0.142545800990472 0.146170624018848 0.150642386746392 0.145443860173947 0.151606278790013 0.151009099501375 0.152139942207876 0.157140929585553 0.149102433098216 0.143827854151798 0.142313728264978 0.146012857727190 0.147121337100388 0.147970973464113 0.143847771212347 0.147153581520905 0.148823606125803 0.149589634382618 5 5|0 +|/ 478236 482524 480162.105 474277 482781 + gene protein_coding_gene TRUE TRUE AT5G02310.1 CER3 (ECERIFERUM 3); protein binding / ubiquitin-protein ligase/ zinc ion binding Putative involvement in the release of fatty acids from elongase complexes. similar to MGC115523 protein [Xenopus laevis] (GB:AAI00241.1); similar to Os01g0148000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042017.1); contains InterPro domain Zinc finger, N-recognin; (InterPro:IPR003126); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.879014310353642 7.39764678990947 1.69675332716922e-05 0.000428209888772445 11.4342290667425 12.0057269320935 0.879014310353642 0.14386180855614 AT5G44180_at 7.65886132621482 7.85490731730397 8.36849219145124 8.39635416877462 8.49396992597722 8.41944219072026 7.14494335902365 6.62327423399943 8.03492910519457 7.6851830767909 8.52740737292933 8.37247097830085 7.90370014917896 8.22590451740408 8.12054284386878 8.36462758175925 8.45755670727223 8.1676924973791 7.96743098714442 0.137049533284931 0.133822660099202 0.135368900383125 0.135792025039542 0.133924872216692 0.134353560504813 0.15209307049249 0.152748516543509 0.149424865332908 0.1383588678102 0.131548984898489 0.134196912110108 0.135239951167987 0.133642200695474 0.141262801667767 0.131695506671217 0.143905087573399 0.132717622049699 0.133493545788212 5 5 + 17806538 17807074 17806770.636 17800399 17807238 + gene protein_coding_gene TRUE TRUE AT5G44180.1 homeobox transcription factor, putative similar to HB-1 (homeobox-1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G28420.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU10652.1); similar to Os05g0562400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056321.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain DDT; (InterPro:IPR004022) 0.735354084031824 7.3970010723153 1.69808677998625e-05 0.000428297112624877 11.4334670011587 15.9516983662106 0.735354084031824 0.0974196900400335 AT5G14540_at 5.84307152576964 6.00780360015684 6.73758725842237 7.19708702804962 8.00533668228208 7.41851970743084 6.26623620594262 5.52445784678295 7.04461515183294 6.46886105455995 7.42861733070243 6.86245061344341 7.25585609092951 7.37149479095298 7.11663525622623 7.58926537512745 6.87746996403984 7.52946068046346 6.40214042157762 0.176375344103416 0.172966773304938 0.195990012277308 0.179313123923082 0.197466895309937 0.186337771816936 0.179112488818758 0.186853958994604 0.174932287397687 0.173663690486422 0.182366316075572 0.179346259585794 0.172008344189526 0.191732979152908 0.18698439397617 0.174081968816235 0.184580979018092 0.175445284656917 0.182895555856236 5 5 - 4687522 4687817 4687681.091 4687150 4689677 - gene protein_coding_gene TRUE TRUE AT5G14540.1 proline-rich family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G01560.1); similar to vegetative cell wall protein gp1 -like [Oryza sativa (japonica cultivar-group)] (GB:BAD68319.1); similar to Os01g0169900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042136.1); contains InterPro domain RuvA-like, C-terminal; (InterPro:IPR011132); contains InterPro domain Protein of unknown function DUF1421; (InterPro:IPR010820); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 1.02230388056435 7.39310756797883 1.70615113082886e-05 0.000430080937580332 11.4288707592342 13.5712350512175 1.02230388056435 0.184192769359443 AT5G07990_at 2.12363154919139 1.95082612835883 2.58177546880958 2.64205129291356 2.81547897750267 3.19808940955497 2.28263996049801 2.08129520180331 1.89633810172001 2.56124523929517 3.34876138402305 2.94409863017499 2.86727099600015 2.80895839183464 2.93390612682766 2.9711603154893 3.24694339404463 2.84880287725106 2.47758611949459 0.207329189836569 0.207820558505666 0.209449394075835 0.206010707592596 0.206950262877028 0.205853483592422 0.209164318922753 0.205289004024133 0.210404872516351 0.209082501480245 0.20789161961562 0.205615041393789 0.204466727432267 0.216739659519948 0.203207694795486 0.206721447501283 0.208135231609294 0.213537148140172 0.211700545316376 5 5|0 +|/ 2562241 2562819 2562528.1 2560395 2563110 + gene protein_coding_gene TRUE TRUE AT5G07990.1 TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding Required for flavonoid 3' hydroxylase activity. Identical to Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1) (TRANSPARENT TESTA 7 protein) (CYP75B1) [Arabidopsis Thaliana] (GB:Q9SD85); similar to CYP706A5 (cytochrome P450, family 706, subfamily A, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G12310.1); similar to flavonoid 3'-hydroxylase [Hieracium pilosella] (GB:ABC47161.1); similar to flavonoid 3'-hydroxylase [Matthiola incana] (GB:AAG49301.1); similar to flavonoid 3'-hydroxylase [Osteospermum hybrid cultivar] (GB:ABB29899.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.692132594092368 7.38212009570707 1.72913226958540e-05 0.000435525463948413 11.4158891422158 5.11345395755851 0.692132594092368 0.0812482603116716 AT5G24000_at 1.97201769692852 2.54543482701388 2.98423789447614 2.91942957744769 3.09762798804496 2.80160135906906 2.42518797066023 2.24450020646576 2.6139567814416 2.93524588966906 3.40407452461917 4.04223547523939 3.05375110947031 3.65420322223768 4.4254925238229 3.63705352460688 3.47933929486608 3.77649043879083 2.73029780129282 0.236168000894399 0.243661367308412 0.228090370635011 0.232511187183366 0.23922311997698 0.244214858170430 0.228090370635011 0.241200317636693 0.248400623012239 0.228581723464270 0.228090370635011 0.228770151613617 0.233007271620302 0.229910039245522 0.24913022396034 0.240312474515495 0.231309722149441 0.235199810507493 0.233553722724388 5 5 - 8110420 8111037 8110731.455 8110316 8112695 - gene protein_coding_gene TRUE TRUE AT5G24000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52540.1); similar to Protein of unknown function DUF819 [Medicago truncatula] (GB:ABE85318.1); contains InterPro domain Protein of unknown function DUF819; (InterPro:IPR008537) 0.78909277644893 7.38182273995812 1.72975883218796e-05 0.000435525463948413 11.4155375923362 5.84571144251719 0.78909277644893 0.116511827642782 AT5G13070_at 7.00949754842546 7.59960155023054 7.86409483373306 8.06931971030361 8.00083261324722 7.53023531592526 7.04639777227365 7.2111562754959 6.37565304523834 5.8890812382367 7.14387163779647 7.38422093707666 7.41248584770215 7.45341873826818 7.19526393519055 7.39413811030686 6.8981768981276 7.30916039040274 6.35533803779841 0.218415064758704 0.212374286546463 0.210183419007644 0.20997789803153 0.214007682082821 0.210130384484781 0.216842822345704 0.213405143234081 0.225516477034121 0.220963503668506 0.206053188001865 0.209937850368653 0.212236475840676 0.210679777199822 0.208012524009743 0.206053188001865 0.229175417779260 0.209884942663643 0.206053188001865 5 5 + 4148254 4149038 4148610.273 4147639 4149255 + gene protein_coding_gene TRUE TRUE AT5G13070.1 MSF1-like family protein similar to hypothetical protein DDBDRAFT_0188914 [Dictyostelium discoideum AX4] (GB:XP_635610.1); similar to Os02g0717900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047936.1); contains InterPro domain Iron dependent repressor; (InterPro:IPR001367); contains InterPro domain MSF1; (InterPro:IPR006797) 0.858304309898497 7.37922093706165 1.73525158236588e-05 0.000436654875874072 11.4124610928268 14.2816583702627 0.858304309898497 0.138329810265593 AT5G56030_at 9.04859029500352 9.36513426513996 9.82113109883728 9.85252947097686 9.40529107111364 9.38273144683882 9.20317327112031 9.59837423221034 8.69265857800689 8.89263103290674 10.0207659090021 10.0793033337436 9.79805796542971 9.76563404442734 10.1735537448341 9.88718648169466 9.50938142583276 9.68273897475227 8.69644150727455 0.113694031084176 0.107346232908980 0.111555110669639 0.106384082705771 0.118868170937969 0.111414945095480 0.114358235088561 0.112685704213548 0.112858977805559 0.111160371202058 0.109355368509545 0.109772151894882 0.11109670787958 0.109579815093703 0.112306468884262 0.108097729415289 0.113189547244838 0.105003393516713 0.116154878065956 5 5 + 22706120 22706613 22706369.727 22704028 22706876 + gene protein_coding_gene TRUE TRUE AT5G56030.1 HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8); ATP binding a member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Identical to Heat shock protein 81-2 (HSP81-2) (HSP81-2) [Arabidopsis Thaliana] (GB:P55737); Identical to Heat shock protein 81-3 (HSP81-3) (HSP81.2) (HSP81-3) [Arabidopsis Thaliana] (GB:P51818;GB:O03985;GB:Q8VYT8;GB:Q94A60;GB:Q9FKU5); similar to heat shock protein 81-4 (HSP81-4) [Arabidopsis thaliana] (TAIR:AT5G56000.1); similar to HSP81-1 (HEAT SHOCK PROTEIN 81-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G52640.1); similar to HSP81-3 (Heat shock protein 81-3), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56010.1); similar to Heat shock cognate protein 80 (GB:P36181); similar to molecular chaperone Hsp90-2 [Nicotiana benthamiana] (GB:AAR12194.1); similar to molecular chaperone Hsp90-1 [Lycopersicon esculentum] (GB:AAR12195.1); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 0.707801725820815 7.37350007550154 1.74739533021162e-05 0.000439455649151211 11.4056932519669 18.7721967810854 0.707801725820815 0.0878801979498051 AT5G57830_at 2.5079885001119 3.07036062142482 2.89566482250919 3.36806164596339 3.74258754916427 3.45029984814323 2.94382583123882 3.00248476591105 2.90867957076822 2.93237800962863 4.66999370899815 4.39959988162436 3.41071370496981 3.97748592695429 4.20952384833966 4.15924410849915 3.81203606252856 4.11281501611273 2.76816929549994 0.236303727795356 0.235001331035723 0.238911301719160 0.242613056824391 0.239511995357855 0.244209375795278 0.241809556110881 0.237328159599888 0.245950305989699 0.234081390633848 0.234081390633848 0.236958514235688 0.234081390633848 0.236816875895711 0.243410962461319 0.234081390633848 0.236410745170699 0.243245952170264 0.241956401665242 5 5 - 23446740 23447368 23447049.545 23446517 23448222 - gene protein_coding_gene TRUE TRUE AT5G57830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30830.1); similar to Protein of unknown function DUF593 [Medicago truncatula] (GB:ABE79503.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.853586388530559 7.37159101322233 1.75146808739793e-05 0.000440224563633766 11.4034338273376 6.6044936101678 0.853586388530559 0.13717179126923 AT5G40710_at 4.61382632134768 4.88293210817409 5.60071123958188 5.62106523961319 6.70557594479713 5.64272732965987 4.66057740988433 5.0790862236382 4.21532757526801 4.56380840333988 5.58466338667404 5.69053663257102 5.45998968943164 5.9078162358056 5.61522728465633 5.2236153425235 5.26526306963848 5.25253694900155 4.42895627233061 0.209334371314609 0.208234045279928 0.224124900187377 0.214051978288285 0.206881055518252 0.229696917998345 0.224079440379747 0.206934927820216 0.217697470891443 0.213769837692596 0.213591545254915 0.213758066852413 0.209155711027606 0.212745122559702 0.21157182304679 0.206881055518252 0.228233816122247 0.206881055518252 0.215104932051069 5 5|0 +|/ 16312929 16313831 16313414.3 16312264 16314232 + gene protein_coding_gene TRUE TRUE AT5G40710.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G63280.1); similar to Os12g0233400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066450.1); similar to PREDICTED: similar to CG4133-PA [Apis mellifera] (GB:XP_393929.2); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.09033653973011 7.36917582262488 1.7566352802855e-05 0.000441267509839148 11.4005746813835 10.3021394724707 1.09033653973011 0.203118485027958 AT5G54470_at 5.56248111659101 6.03593709508482 6.91728990515327 6.76552232994277 7.68402377508591 7.10728798904528 7.4232731061942 7.40984743168238 5.66067810954169 5.29169139483847 6.39802524146995 6.7690517094303 7.28064332873783 7.06660187511444 5.72615641438494 6.71972128955745 6.81083312125913 6.33316798102778 5.48043037908036 0.220839707044150 0.211710179453586 0.206799554197280 0.213004022747080 0.221528125802631 0.218908485254111 0.218563840584694 0.219152638100764 0.215948632595531 0.22468741122472 0.212504673789210 0.209690719513731 0.212163526179668 0.215097662642389 0.216224120174019 0.211130166380158 0.213518878709578 0.207772582035599 0.217299028631843 5 5 - 22132046 22132426 22132268.909 22131530 22132698 - gene protein_coding_gene TRUE TRUE AT5G54470.1 zinc finger (B-box type) family protein similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G27310.1); similar to Os06g0298200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057441.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96940.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.835535735693963 7.36749010388277 1.76025153905464e-05 0.000441919878529889 11.3985786303047 12.9210203842356 0.835535735693963 0.131794320947565 AT5G04600_at 7.99301276691973 8.06155638097498 8.46859528363743 8.68426763337092 8.83627343650809 8.8022396754854 7.94971085212069 8.02850508956313 7.18218212751873 7.22035091305614 7.7263452747127 7.88123963369369 7.97947474097889 7.38854925114127 8.18443389353472 7.87010778588526 7.80890927018478 7.77370456359141 7.45961503167156 0.174086622086320 0.169676487600004 0.184297404224503 0.167085565935434 0.173739574007868 0.183788788889896 0.166300482253216 0.174584490837465 0.171318693159123 0.178116244344443 0.174800063175042 0.169043130090103 0.178075915231390 0.174051403622135 0.172660343561173 0.171342869245309 0.173038914649914 0.168443273764336 0.171628673064393 5 5|0 +|/ 1323787 1325442 1324314.333 1323640 1325628 + gene protein_coding_gene TRUE TRUE AT5G04600.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G47120.1); similar to RNA binding protein-like protein [Solanum tuberosum] (GB:ABB87134.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.614430297911184 7.36586511520132 1.7637451168331e-05 0.000442540710317035 11.3966541258815 15.9100092610546 0.614430297911184 0.0418848125761862 AT5G25890_at 3.01115900465813 3.63552745083178 4.17818183982141 4.44442692966665 3.9486278034282 3.62914140629373 3.48768522974969 3.48892341514734 2.94180027281801 3.02959350329288 3.55438805477572 4.55496761617284 4.06767661863945 4.00429268807176 3.71464390746353 4.62293811699647 4.5268045269799 4.04454492125173 3.40104509715237 0.271428694841562 0.272658080006606 0.282350005996079 0.273931668451829 0.268811798658929 0.27814574299627 0.275257247736158 0.270985690496647 0.288376552984036 0.275369265950849 0.268444574006282 0.268444574006282 0.274672497031728 0.268778097414863 0.277093507698819 0.268444574006282 0.275677667728292 0.273624108677543 0.270323553056037 5 5|0 +|/ 9033503 9034401 9033871.4 9033418 9034837 + gene protein_coding_gene TRUE TRUE AT5G25890.1 IAA28 (IAA-ALANINE RESISTANT 2); transcription factor encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene. Identical to Auxin-responsive protein IAA28 (Indoleacetic acid-induced protein 28) (IAA28) [Arabidopsis Thaliana] (GB:Q9XFM0;GB:Q9S9V6); similar to IAA18 (indoleacetic acid-induced protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51950.1); similar to Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) (GB:Q75GB1); similar to Os02g0228900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046357.1); similar to Os01g0190300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042263.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.828203242455968 7.35876444853371 1.77909884897170e-05 0.000446134930288986 11.3882404858497 7.35817330864045 0.828203242455968 0.129825084631748 AT5G08420_at 7.77423644741648 8.17496788889898 8.63709071830152 8.67991154351073 9.02960086775589 9.03001705068973 8.30913423683118 8.10483311900757 7.68872388482484 8.15058444086205 8.46701395713231 9.06291244535612 8.4807215152667 8.08121195629163 8.38245744350684 8.5324665680978 8.2913416629983 8.35311645096764 7.6949980692044 0.215888272688773 0.212459257158357 0.222122823338591 0.217895664768551 0.215907956379664 0.218455418693932 0.218944218402647 0.215608764755463 0.240196488222476 0.218374742801347 0.220344250614925 0.209755107037543 0.219703259005913 0.214475719418418 0.219721613105507 0.21098232045013 0.231639316526174 0.21939110186771 0.223769887149512 5 5|0 +|/ 2714836 2715999 2715166 2713414 2716180 + gene protein_coding_gene TRUE TRUE AT5G08420.1 similar to NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) [Arabidopsis thaliana] (TAIR:AT3G57150.1); similar to rev protein (42.9 kD)-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82278.1); similar to Os10g0452800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064737.1); contains domain Eukaryotic type KH-domain (KH-domain type I) (SSF54791); contains domain Gametocyte protein Pfg27 (SSF89162); contains domain SUBFAMILY NOT NAMED (PTHR12581:SF2); contains domain no description (G3D.3.30.70.210); contains domain FAMILY NOT NAMED (PTHR12581) 0.682499286840492 7.35684629211522 1.78327114634473e-05 0.000446867749887004 11.3859664762698 16.6180610081761 0.682499286840492 0.0781928365316641 AT5G51230_at 3.96423670884937 3.89110367425140 4.19933230074936 4.24949774449955 4.6778125415526 4.21684142015336 3.74884386567713 3.69988181871775 3.9442403751586 3.9072004197323 4.64547747262621 5.05150929300616 4.93104265401907 4.70590884225374 4.72415037911311 4.85357487197619 4.98502565611346 4.41642359382157 3.90096342576074 0.186502635454667 0.187654256942652 0.190506664977172 0.189711466172799 0.191850701434274 0.197960837795064 0.193104086207586 0.20104409987658 0.193886268109897 0.196853434676882 0.187403165373086 0.187863898667636 0.185341150049986 0.191792248949261 0.189685023136955 0.184215035288601 0.194487378479985 0.192251682445123 0.193601866942239 5 5 + 20842912 20846542 20844927.526 20840962 20846790 + gene protein_coding_gene TRUE TRUE AT5G51230.1|AT5G51230.2 EMF2 (EMBRYONIC FLOWER 2); transcription factor Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Identical to Polycomb protein EMBRYONIC FLOWER 2 (EMF2) [Arabidopsis Thaliana] (GB:Q8L6Y4;GB:Q93V59;GB:Q9LU50;GB:Q9LU51); similar to VRN2 (REDUCED VERNALIZATION RESPONSE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G16845.1); similar to embryonic flower 2 [Yucca filamentosa] (GB:ABD85300.1); similar to polycomb group protein EMF2 [Asparagus officinalis] (GB:ABD85301.1); similar to embryonic flower 2 [Silene latifolia] (GB:BAD93353.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.690762753340225 7.35647383537169 1.78408252183257e-05 0.000446867749887004 11.3855248642647 8.43424734376469 0.690762753340225 0.0816767908846884 AT5G52550_at 6.92416611618277 6.49407785921193 7.80665155525824 7.96364838290452 8.45893065535974 7.3879172434302 7.0061383864868 6.80927400919741 7.08562656991013 6.27905159762265 8.0087834276072 8.24034405568194 8.00244298528954 7.88335329510159 7.55101990870436 8.11121079019949 6.97300798408938 7.4255330968715 6.69682569509147 0.232530335597648 0.217605426906606 0.227655193803121 0.220472015619152 0.221868115160462 0.240851502585918 0.221242276500473 0.232031231250478 0.234772562245852 0.226909195198532 0.222130123000511 0.224142522447555 0.220153516199816 0.229314703912371 0.222291045559170 0.220234157338729 0.237329565692364 0.224536801087722 0.220916718285646 5 5 - 21345188 21345590 21345373 21344938 21347362 - gene protein_coding_gene TRUE TRUE AT5G52550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25670.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE85314.1) 1.09158342760175 7.34384082363365 1.81183987703403e-05 0.0004535582475158 11.3705351198778 14.5871654745796 1.09158342760175 0.204427975288399 AT5G27460_at 5.14134902490381 4.86259509198423 6.12064130793122 6.08502812026199 6.46895372232368 5.6029677675476 4.69965357810752 4.93005481086146 5.28617965147271 5.30776015770442 6.1931986858434 6.31312575667425 5.99979685256756 6.2798610557575 5.72824882469639 5.91353206842176 5.18443563625077 5.52543313590733 4.94781459552805 0.193485804787628 0.194495906324695 0.200052986786149 0.206867890535471 0.203767555166818 0.200961443457128 0.193401495330608 0.200173397628824 0.205378302198028 0.194889620850258 0.197084969008954 0.195403040021761 0.195373383615943 0.201501183696296 0.197970531030291 0.198642067859318 0.204935060233315 0.20068437312221 0.196478562393207 5 5 - 9693344 9693750 9693526.636 9693265 9694843 - gene protein_coding_gene TRUE TRUE AT5G27460.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G02150.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABD28679.1); similar to Os12g0527900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066910.1); similar to Os02g0796400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048388.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) 0.936301901749169 7.33807891427093 1.82465428073543e-05 0.000456502510240336 11.3636911274773 11.0252998297818 0.936301901749169 0.16252297310406 AT5G09220_at 11.1697145351922 11.1712521564682 12.3629876249964 12.3480379551520 12.0994639679859 12.1318861508713 11.4888137627066 11.7323072666635 10.3570700324843 11.3216540197753 11.418858746676 10.2245588114134 11.9629773893031 11.4554027273730 10.0497053178572 11.5442720106254 11.8910870512536 11.3893865265658 10.9059032070677 0.0647003906639562 0.0638411683810858 0.0656692725916334 0.0638683116155348 0.066085081922369 0.0660861161101177 0.0627795955929684 0.0633192891281558 0.0669589939846153 0.0630725334352843 0.0617150236562727 0.061832031400835 0.0634257422869677 0.0660392119161893 0.0640435959728433 0.0617150236562727 0.0683112774855504 0.06336471906129 0.0647317496819312 5 5 + 2868274 2868807 2868513.455 2866253 2869055 + gene protein_coding_gene TRUE TRUE AT5G09220.1 AAP2 (AMINO ACID PERMEASE 2); amino acid permease member of AAAP family similar to AAP4 (amino acid permease 4), amino acid permease [Arabidopsis thaliana] (TAIR:AT5G63850.1); similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to AAP5 (amino acid permease 5), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G44100.1); similar to amino acid transporter [Lycopersicon esculentum] (GB:AAO13689.1); similar to amino acid permease [Brassica napus] (GB:CAF22024.1); similar to amino acid carrier [Ricinus communis] (GB:CAA07563.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.612780323675721 7.33424162457728 1.83324254129725e-05 0.000458386665987670 11.3591307002634 22.8648446737091 0.612780323675721 0.0425890802092622 AT5G17770_at 10.0283912991708 10.1098485107121 10.6312153971569 10.6794522628665 10.5542049123594 10.4084718175761 10.2052385996531 10.3662200941963 9.94086530826386 9.93188311820328 10.9124603804131 11.0101069920437 10.6724590867056 10.7646361615226 10.9938953574432 10.5443631344549 10.4082457150865 10.8151343755638 9.93861251753422 0.0641889925014838 0.0652834766224625 0.0677527446658994 0.0634252165116714 0.0631144839967544 0.0639023950143116 0.0639591962734074 0.0633542309686011 0.0666175241244066 0.0625176877623771 0.0625176877623771 0.0625176877623771 0.0625176877623771 0.065235348817191 0.0658195225088894 0.0625176877623771 0.0655958178575086 0.0632973615943807 0.0633306303754468 5 5|0 -|/ 5864559 5865798 5865095.556 5864253 5866708 - gene protein_coding_gene TRUE TRUE AT5G17770.1 ATCBR (NADH:CYTOCHROME B5 REDUCTASE 1) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor. similar to NADH-cytochrome b5 reductase, putative [Arabidopsis thaliana] (TAIR:AT5G20080.1); similar to NADH:cytochrome b5 reductase [Vernicia fordii] (GB:AAV69019.1); contains InterPro domain Cytochrome-b5 reductase; (InterPro:IPR012260); contains InterPro domain Oxidoreductase FAD-binding region; (InterPro:IPR008333); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) 0.609476903646831 7.32117588990374 1.86281338960181e-05 0.000465512143021709 11.3435877438717 20.7240218442470 0.609476903646831 0.0409943264557583 AT5G18620_at 6.24202557559662 6.35429322586234 6.89307704636452 6.69674820085401 7.16153118216265 6.57753010892925 6.65867099309653 6.21987621011255 5.52257563387621 5.63356244212757 6.66527870470994 7.86442172498459 6.30345127172167 6.86685476480234 7.11245122456622 7.19674202956742 6.65354034752566 6.87662014923084 6.07079717025767 0.197415822869064 0.196638404138631 0.192289939236396 0.202537816945670 0.202502664787412 0.202988084226827 0.210309010910718 0.202121123346785 0.212948996595448 0.196066246061096 0.199216278983208 0.199638856135417 0.194803755829877 0.207057820516301 0.199727168114310 0.197730173643594 0.199753427110655 0.203283389378827 0.192289939236396 5 5|0 -|/ 6196373 6197169 6196629.889 6195919 6202168 - gene protein_coding_gene TRUE TRUE AT5G18620.1|AT5G18620.2 CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase similar to CHR11 (CHROMATIN-REMODELING PROTEIN 11), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT3G06400.1); similar to Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] (GB:AAK53826.1); similar to Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL54689.1); similar to chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas reinhardtii] (GB:AAY86155.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.831806705897685 7.31932653432713 1.86704029181887e-05 0.000466299674095828 11.3413858837364 12.9428349558185 0.831806705897685 0.132332758977438 AT5G21100_at 6.43456849053335 6.99054712908216 8.60555038343914 8.664434690503 8.82915790571658 8.50677845451253 9.23395277458135 9.12496305910533 8.70449033035268 8.8508259408264 9.7905499615425 9.56461754486252 9.53045096251228 9.62416608302654 9.42341290065305 9.86419066170668 9.59538025169766 9.74937301530993 8.85369115357113 0.182435240340195 0.166520055643335 0.154163510916618 0.154487124257689 0.156087241518973 0.151382544169251 0.152294053548786 0.150495704625821 0.16085410382048 0.152951619591993 0.152162945044785 0.146809607548212 0.146809607548212 0.156435451599473 0.150499857572855 0.155018638852802 0.156844208662297 0.152190322385029 0.159909754277393 5 5 + 7170138 7170609 7170311.545 7168186 7170930 + gene protein_coding_gene TRUE TRUE AT5G21100.1 L-ascorbate oxidase, putative similar to L-ascorbate oxidase/ copper ion binding [Arabidopsis thaliana] (TAIR:AT5G21105.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20933.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20931.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20932.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.77261884648221 7.31855264788514 1.86881216053382e-05 0.000466473498412077 11.3404643493605 17.5216291847245 0.77261884648221 0.113266475564819 AT5G60990_at 6.76585348487534 7.38923773400202 7.85475342768877 7.90599507762704 7.70169554638632 7.39386405500431 6.95214653568849 6.8535915688577 5.33049670006481 5.81914885704499 6.2275794651881 6.80459453159128 6.40782449220653 6.75928570068027 6.78960906175364 6.96609252544845 6.76183419354737 6.39043418437893 6.14820851087802 0.224818785425399 0.225615935723829 0.229549961562457 0.220927770055529 0.225872987645264 0.251470146874944 0.224561917732203 0.222735937181826 0.240955262317722 0.22323575395454 0.228397051311003 0.227037259099657 0.234234780866919 0.222544319462413 0.233350754766499 0.221362262274488 0.24864244078564 0.233096291975967 0.220923260696197 5 5 - 24564133 24564756 24564530.727 24563656 24566565 - gene protein_coding_gene TRUE TRUE AT5G60990.1 DEAD/DEAH box helicase, putative (RH10) Identical to DEAD-box ATP-dependent RNA helicase 10 (EC 3.6.1.-) (RH10) [Arabidopsis Thaliana] (GB:Q8GY84;GB:Q8LA24;GB:Q9FME1;GB:Q9ZS10); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT1G16280.1); similar to putative replication protein A1 [Trifolium pratense] (GB:BAE71224.1); similar to Helicase, C-terminal [Medicago truncatula] (GB:ABE88834.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 0.798162554587052 7.31454081160879 1.87802665046951e-05 0.000468503803674679 11.3356857999534 13.5543212414389 0.798162554587052 0.121841659747318 AT5G08200_at 4.10405448976375 4.22362097128594 4.70446566042197 4.60702008894975 5.28333837470268 4.6996717156941 4.46891891144786 4.87054492442775 4.75755554174567 4.31728266725984 6.11549669238996 5.915831938969 5.63852709450159 5.67320710305653 5.76519504572752 5.66029459815149 4.90137540197535 5.58117690460987 4.26139112714878 0.211656624863289 0.218547604442786 0.215148213228234 0.213302019929234 0.209465510544743 0.217287483741699 0.214765509547871 0.21795896315314 0.216470758725841 0.217104248217283 0.208635076769939 0.208635076769939 0.216076892350770 0.214199112175813 0.211065198564055 0.208635076769939 0.221545788852862 0.214035374848052 0.216609035316745 5 5 + 2639939 2640424 2640186.636 2638037 2640825 + gene protein_coding_gene TRUE TRUE AT5G08200.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23130.1); similar to Os10g0485500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064897.1); similar to LysM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93589.1); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) 0.808908727207686 7.3093180329075 1.89009591608065e-05 0.000471243533862672 11.3294616032911 9.6711033301571 0.808908727207686 0.125480981600761 AT5G18270_at 1.74472973724654 2.14795985848561 3.75583580275665 3.55484446775870 2.02501169340806 2.08186760009053 1.37739859333502 1.01176395030089 1.33007947617910 1.54159353629112 1.66118371490803 1.62948050791912 1.76170044486305 1.69039179394205 1.54059610611630 1.68264238239898 1.67359469318082 1.44871126062341 1.47164788336881 0.222717014251748 0.228033331053987 0.247975048433202 0.257903725279846 0.228618821668161 0.229671743503449 0.226886817786657 0.218314934407373 0.223327931407811 0.225348370397636 0.222351234153807 0.220436834903835 0.220925612191685 0.225500628252491 0.233403453708371 0.218168366440409 0.224242076420724 0.230236315366161 0.223188399058984 5 5 - 6041245 6042027 6041520.091 6040921 6042940 - gene protein_coding_gene TRUE TRUE AT5G18270.1|AT5G18270.2 ANAC087; transcription factor|ANAC087 similar to ANAC046 (Arabidopsis NAC domain containing protein 46), transcription factor [Arabidopsis thaliana] (TAIR:AT3G04060.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.73609541860455 7.30875661631991 1.89139825626062e-05 0.000471297220409578 11.3287923196263 3.75433208539290 0.73609541860455 0.100894480485497 AT5G57250_at 3.56310052017928 3.0247769381868 3.97399197023306 3.95080217519452 4.58362155701696 3.60792863258364 3.67387519317102 3.55295359722336 2.94045977528102 2.72174204204327 4.26785420718883 4.4257381600405 4.42022134085854 4.18236473383943 4.34188630282109 4.70396482175078 4.31760184638034 4.43688087245138 2.94421350178904 0.245661802490332 0.242261122272216 0.241133795269197 0.237930301436634 0.244479990575381 0.242824224708437 0.237930301436634 0.242332626203974 0.245495005080727 0.24368503865368 0.238565912833254 0.242338499932059 0.241363519040073 0.243706950770319 0.239325344752531 0.237930301436634 0.252804500820306 0.246826266672657 0.240796182859701 5 5 - 23212843 23213347 23213057.909 23212835 23215750 - gene protein_coding_gene TRUE TRUE AT5G57250.1 similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABD28636.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.04683422543109 7.30688591707461 1.89574477718474e-05 0.000472108956296504 11.3265618864584 7.36931589399231 1.04683422543109 0.194016488424951 AT5G05010_at 8.85978860611472 8.97070224200869 9.20745618888897 9.28151433978614 9.47774176688538 9.24949017920858 8.96752843239686 8.78030516980788 8.88391408036177 8.89163963450201 9.7513896394423 9.9579723983421 9.67464985517007 9.59036148746855 9.9348676037986 9.64651065334897 9.63761927740194 9.59604456672326 8.83498851061044 0.109284564572546 0.110361798365658 0.108599274321999 0.11007782520583 0.109672552293767 0.116059859831001 0.108130617557196 0.117338715712757 0.125709863187598 0.111731559158469 0.108208556537659 0.104057442036080 0.109836345634797 0.108115083634404 0.107713854693365 0.106154927748917 0.111918525426808 0.108909510409481 0.115977038087292 5 5|0 +|/ 1478880 1479830 1479364.556 1476587 1480198 + gene protein_coding_gene TRUE TRUE AT5G05010.1|AT5G05010.2 clathrin adaptor complexes medium subunit-related similar to delta-COP [Zea mays] (GB:AAF67098.1); similar to Os05g0310800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055159.1); similar to Os05g0311000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055160.1); contains InterPro domain Clathrin adaptor complex, medium chain; (InterPro:IPR001392); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) 0.631482849748736 7.299985056896 1.91187210218560e-05 0.000475851921981949 11.318329878101 18.3962447041555 0.631482849748736 0.0560595035718919 AT5G66180_at 6.26740596708993 6.13093613245423 7.10867117973734 7.24832688209627 8.52071353411936 7.6145720766706 6.1110514310208 5.1057086747487 5.1851632667737 5.92571281487366 6.33321428178189 6.16601775433725 6.64048734169571 6.81508104494293 5.85842701148927 7.02325946371748 6.85206897655863 6.74569142213004 6.45606559052561 0.225805538824536 0.213334646933113 0.221708166142286 0.224275899557764 0.218953446554976 0.241822874180834 0.215480579696544 0.214760523512962 0.225999666313013 0.211085543774798 0.228525051775127 0.21516712756264 0.209758309260816 0.21977485521476 0.218262171077468 0.211341550167158 0.221460557187759 0.21515043170253 0.209758309260816 5 5 + 26467197 26468102 26467647.8 26466164 26468380 + gene protein_coding_gene TRUE TRUE AT5G66180.1|AT5G66180.2|AT5G66180.3 similar to NOL1/NOP2/sun family protein [Arabidopsis thaliana] (TAIR:AT1G06560.1); similar to hypothetical protein MtrDRAFT_AC148217g15v1 [Medicago truncatula] (GB:ABE88184.1); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; (InterPro:IPR001678)|similar to hypothetical protein MtrDRAFT_AC148217g15v1 [Medicago truncatula] (GB:ABE88184.1); contains domain NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING (PTHR22807); contains domain RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE B (SUN) (PTHR22807:SF12); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) 1.20896452742574 7.2949014798183 1.92384701057434e-05 0.00047833409056558 11.3122615521671 12.9683873028118 1.20896452742574 0.236644525568022 AT5G22730_at 4.51083544629304 4.84423551745618 5.13040423418828 5.6644125170663 5.63868873500527 5.48917158173177 4.34695505589136 4.66553122182890 4.53277414253937 4.59395592981981 5.5209510400521 5.73784028031915 5.58973314786001 5.34928703648183 4.94827167103774 5.58259702316286 4.97373360806295 5.04127034167381 4.73721244789265 0.210366442143094 0.200261853310452 0.227859829657596 0.206972230405647 0.204743893511238 0.213609811444647 0.203167219697709 0.204222108816008 0.212102139686653 0.195478884570411 0.195478884570411 0.19582469766181 0.195478884570411 0.206271750142297 0.205458301456582 0.195478884570411 0.208564859990823 0.198483282892061 0.201434812399243 5 5 - 7551645 7552376 7551926.273 7551432 7553455 - gene protein_coding_gene TRUE TRUE AT5G22730.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22610.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.80521315089728 7.29481500463643 1.92405141010253e-05 0.00047833409056558 11.3121582952744 10.0184166346819 0.80521315089728 0.124811482552964 AT5G54140_at 4.12492513769782 4.5104790251648 5.03427309168644 5.32382871210166 4.37083304978202 3.98708131126284 2.44389386654163 2.38238840265567 2.80556257270923 2.39142445280595 2.76596957818734 3.33852030697842 2.82734512022232 2.81658561915178 2.25466370547027 3.12499619024470 2.95841389410498 2.42331999105067 2.67396343771011 0.243418595879052 0.237605592364086 0.244112334431361 0.242827833857141 0.22987387204762 0.252429295525103 0.227763791568381 0.227627636355872 0.236002161088223 0.226090684513992 0.223744306154780 0.225287149462571 0.223744306154780 0.224848233885059 0.236921272548976 0.227297214657503 0.227211091160426 0.228790875120102 0.226126338593163 5 5|0 +|/ 21984058 21984991 21984592.8 21983059 21985287 + gene protein_coding_gene TRUE TRUE AT5G54140.1 ILL3 (IAA-amino acid hydrolase ILR1-like 3); metallopeptidase encodes a protein similar to IAA amino acid conjugate hydrolase Identical to IAA-amino acid hydrolase ILR1-like 3 precursor (EC 3.5.1.-) (ILL3) [Arabidopsis Thaliana] (GB:O81641); similar to IAR3 (IAA-ALANINE RESISTANT 3), metallopeptidase [Arabidopsis thaliana] (TAIR:AT1G51760.1); similar to putative auxin-amidohydrolase precursor [Populus alba x Populus tremula] (GB:CAG32960.1); contains InterPro domain Peptidase M20; (InterPro:IPR002933); contains InterPro domain Peptidase M20D, amidohydrolase; (InterPro:IPR010168) 0.75182953973057 7.28960100794136 1.93641898180579e-05 0.00048095208517908 11.3059305671914 6.74090130215398 0.75182953973057 0.107174162534288 AT5G36230_at 10.0197052474239 10.2027113391601 10.3516720863838 10.3943949854266 10.6509813190403 10.4585475619175 9.8844001632573 10.0825278094759 10.0369343728363 9.88940369419806 10.9110709526878 10.8824158138524 10.7890730987441 10.7096768300778 10.7499353772489 10.6809694211447 10.5813667969294 10.6038982644525 9.73655356924204 0.0921248759758358 0.0892674901472386 0.0962089098883075 0.0915373225045209 0.0922341138488713 0.0934298087233523 0.095295449813 0.0892674901472386 0.0947684462035057 0.0948559260137144 0.0892674901472386 0.0892674901472386 0.0892674901472386 0.0922268282155575 0.091203133839507 0.0892674901472386 0.0918623320092537 0.0930893499033724 0.0951504714492584 5 5 + 14292541 14293774 14293273.545 14290614 14294256 + gene protein_coding_gene TRUE TRUE AT5G36230.1 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G65220.1); similar to eIF4-gamma/eIF5/eIF2-epsilon [Medicago truncatula] (GB:ABE89800.1); similar to Os11g0414000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067760.1); similar to putative protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95492.1); contains InterPro domain eIF4-gamma/eIF5/eIF2-epsilon; (InterPro:IPR003307) 0.633741561164752 7.28944069812943 1.93680059100728e-05 0.00048095208517908 11.3057390304328 20.5687082464195 0.633741561164752 0.057812119235332 AT5G18650_at 8.77239582908047 9.16592443584377 9.46714391646472 9.41061300712302 10.4977105554360 10.0528471835441 9.10011534596727 8.89670294284935 9.58343330512428 9.31345462200719 10.3419793644995 10.3021531595604 10.2097075194095 10.1493047197296 10.0964548292879 10.4474593295973 9.71126713952175 9.8960990361379 9.61244608093984 0.149340080110774 0.14092830835727 0.147424804607760 0.147931525176974 0.148683880997061 0.155225009552571 0.139045375255022 0.141703024446382 0.159338528596065 0.143132873315217 0.147136873751518 0.141323479853873 0.141628131304240 0.151635946828011 0.142020971131064 0.141610091763227 0.154189531220514 0.144946287104254 0.141270755940835 5 0|5 /|+ 6219438 6220335 6219860.75 6217914 6220704 + gene protein_coding_gene TRUE TRUE AT5G18650.1 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G62970.1); similar to Os12g0538500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066941.1); similar to CHY zinc finger family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93958.1); similar to Zinc finger, RING-type; Zinc finger, CHY-type [Medicago truncatula] (GB:ABE83637.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.757242914200472 7.28876351717342 1.93841347982404e-05 0.000481077071559948 11.3049299019051 19.2441388886595 0.757242914200472 0.109084926474325 AT5G47930_at 9.91432103962507 10.1957981105363 10.4017767318284 10.5330669794879 10.7442449927315 10.4233176544109 10.0226586212039 9.95790697790344 9.34905359871047 9.4716943439775 10.3217309957755 10.7556519917342 10.0141576780796 9.98520575046667 10.4519591185282 10.1806580552476 10.1403696454823 10.2259212548097 9.41100672178561 0.120460506962355 0.117274324332817 0.113883619657228 0.119117585465299 0.115034704041775 0.126751981774904 0.116588691768966 0.119091590865998 0.128728979348128 0.124847108270854 0.121568026731830 0.114197391574951 0.113703032836691 0.120516865845677 0.117396272057711 0.117606553013642 0.122708930402612 0.115575058297501 0.119651799677520 5 5|0 -|/ 19423664 19424386 19423908.778 19423389 19424626 - gene protein_coding_gene TRUE TRUE AT5G47930.1 40S ribosomal protein S27 (RPS27D) Identical to 40S ribosomal protein S27-3 (RPS27D) [Arabidopsis Thaliana] (GB:Q8L953;GB:Q9FGV6); similar to ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G61110.1); similar to ribosomal protein S27-like protein [Solanum tuberosum] (GB:ABA40465.1); contains InterPro domain Ribosomal protein S27E; (InterPro:IPR000592) 0.675901162702542 7.28814371357915 1.93989097796642e-05 0.000481168332788247 11.3041892758279 20.1091572381776 0.675901162702542 0.078096101776416 AT5G46400_at 3.82052345993126 3.99932012526825 4.62637016815684 4.97742184269852 5.3968482468197 4.80678732432892 4.13474805821587 3.33716231248472 3.54954090046738 3.85959333240672 4.49779508493781 4.8157946330417 4.48231295211743 4.74075489450435 4.54708287255342 5.24930058742053 4.68800250520314 4.33203073857825 3.93354533367801 0.203232697026069 0.20428905244666 0.200533846911275 0.200907755565173 0.215181524862672 0.213489059106412 0.203057356117309 0.209049975691798 0.207837944826922 0.205739983466643 0.200419565857058 0.200419565857058 0.20239871641682 0.204006801218967 0.212235509620088 0.200419565857058 0.208080468650033 0.212741962295249 0.200663160413968 5 5 + 18841038 18841541 18841279.909 18837259 18841877 + gene protein_coding_gene TRUE TRUE AT5G46400.1 binding similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G04080.1); similar to Involucrin repeat; RNA-processing protein, HAT helix [Medicago truncatula] (GB:ABE92782.1); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.00857975060992 7.27953017296393 1.96055021484649e-05 0.000486014585823396 11.2938912167893 8.61241142843565 1.00857975060992 0.184732950960149 AT5G10290_at 6.92720087956343 7.22832774858145 7.60818568819721 7.33270201376934 7.2192681350131 6.21081736426779 4.8254868564278 4.94105085363122 5.89366257762122 5.2288045663412 6.18999088379032 7.21706788250282 5.66011890268755 6.81591094085534 6.95114128007462 7.23620604153262 5.25020016422019 5.6345013516728 5.17002598848598 0.198472691712602 0.187358833920573 0.190174134139516 0.192592819307751 0.186260264728551 0.201044861434070 0.195341421627983 0.193217590279637 0.206574474033492 0.196094444966777 0.191469734855920 0.188193265608574 0.189158561191692 0.184029146133199 0.189089745643347 0.188989944432096 0.197455941499421 0.209559108562046 0.209090294318206 5 5|0 -|/ 3235533 3236034 3235745.9 3235296 3238720 - gene protein_coding_gene TRUE TRUE AT5G10290.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G65240.1); similar to 4D11_24 [Brassica rapa subsp. pekinensis] (GB:AAZ67538.1); similar to putative receptor-like kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07247.1); similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98429.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.02539392626423 7.278758144343 1.96241344127597e-05 0.000486198487574716 11.2929677111148 12.4367415549647 1.02539392626423 0.189326598371498 AT5G48810_at 11.1480287819560 11.3429902464991 11.7437430649485 12.0137493627047 12.1325611213732 11.9344040273324 10.8358688948658 11.1753825679868 11.4503146234677 11.0901066034341 11.9383938401368 11.8151898296447 11.8995650765436 12.05837417213 11.5303858283218 11.8778365289678 11.5228750049812 11.8804298459074 11.1860936860360 0.0866885615326522 0.0841408985659844 0.086508126244942 0.0936507025009622 0.0938690260871174 0.0879932397761028 0.0884828297578289 0.0848924907546456 0.087742360001214 0.0861320209998668 0.0832715423441757 0.0832715423441757 0.0832715423441757 0.0856455507372963 0.0869501924762981 0.0832715423441757 0.0953193493501728 0.0854319486701297 0.0872034450865754 5 5|0 -|/ 19806475 19807363 19806795 19806293 19807560 - gene protein_coding_gene TRUE TRUE AT5G48810.1 ATB5-B (Cytochrome b5 B) Encodes a cytochrome b5 isoform. similar to B5 #4 (cytochrome b5 family protein #4), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G32720.1); similar to Cytochrome b5 (GB:P49098); similar to cytochrome b5 - common tobacco (GB:S46306); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.701878199723011 7.27802208431976 1.96419163781753e-05 0.000486282104804998 11.2920871555653 23.0696174601959 0.701878199723011 0.0891608028960083 AT5G66200_at 7.77338706788888 8.21551583522119 8.71934191909881 8.88231524410736 9.11980538386125 8.9098522022686 8.36164751165578 8.18767631167766 8.69525899657063 7.98924618231906 9.45435014959907 8.73040104967927 9.27584924577828 9.28375168307826 8.67270441530214 8.58586732673353 8.1750506489214 8.95577552176205 8.02091367506543 0.138220055813883 0.132690014464258 0.135309494755173 0.137684715024797 0.136153049583602 0.131479065527389 0.135058120258208 0.138416257691185 0.141190891844717 0.135743261290718 0.135319681790522 0.139004166400020 0.131705466748454 0.138545746750267 0.131334028489482 0.142091527876148 0.163057417709673 0.140807444219483 0.146610176669581 5 5 - 26471031 26471417 26471198.636 26470686 26473048 - gene protein_coding_gene TRUE TRUE AT5G66200.1 armadillo/beta-catenin repeat family protein similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G36030.1); similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G34940.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92291.1); similar to Armadillo [Medicago truncatula] (GB:ABE77933.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD34223.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.714925571422421 7.27755021261942 1.96533251352126e-05 0.000486282104804998 11.2915226121015 17.0846218710183 0.714925571422421 0.0942130424221085 AT5G22920_at 10.4607888819268 10.3779169227014 10.6341731817794 10.5474803496847 11.7084400012352 11.3179266623376 10.2732574661413 10.1534355382344 10.0807127776978 9.98136910915785 10.761158944959 10.8578917212657 10.6436568062443 10.6426028602917 10.7523192657712 10.5195266160559 10.5624410660906 10.7019484471513 10.1963950918585 0.0746519362825257 0.0748899962955543 0.0779012674419313 0.0754086797593092 0.077364132157595 0.0838098391848686 0.0751900990300292 0.0765902018754188 0.0874267809733357 0.0769870732483044 0.0774405149532999 0.0744923363748491 0.0747665182221836 0.0783436747645008 0.0763679377238759 0.0744923363748491 0.0821348417558041 0.0769174008385585 0.0765966309002965 5 0|5 /|+ 7666275 7666995 7666742 7664994 7667268 + gene protein_coding_gene TRUE TRUE AT5G22920.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G25560.1); similar to PGPD14 [Petunia x hybrida] (GB:AAD02556.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.664844784791135 7.27707385374191 1.96648496264801e-05 0.000486282104804998 11.2909526693886 21.0673534799468 0.664844784791135 0.0736736145174203 AT5G41580_at 3.20205334834282 3.13361870736982 3.68556778185931 3.4208868567065 4.56584524965295 4.24737557701859 3.23954350735899 2.94220538557167 3.29104635352175 3.85538531053517 3.90664459561294 4.47881860266406 4.14855941551741 3.99790246504830 3.72740868955228 4.0340341467605 4.08507246291067 4.2141309378602 3.41918084934515 0.208707488085760 0.2064187391697 0.211973194711139 0.211668112628739 0.205732639814342 0.219528599130162 0.212844892048735 0.217362619330190 0.214059406275604 0.219670689319237 0.205282259043574 0.207891523569041 0.210725607329979 0.205626371521327 0.207843715496308 0.208775828768185 0.210282092252734 0.206017270014821 0.209105737296991 5 5 - 16643807 16644222 16644022.727 16643565 16648011 - gene protein_coding_gene TRUE TRUE AT5G41580.1 zinc ion binding similar to EMB3001 (EMBRYO DEFECTIVE 3001), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G08910.1); similar to transcription factor [Vicia faba var. minor] (GB:CAA66482.1); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) 0.701382102919313 7.27676307091164 1.9672372282905e-05 0.000486282104804998 11.2905808145308 7.35260817788082 0.701382102919313 0.0890134017842734 AT5G65720_at 8.74688583428334 8.97913603732067 9.78229295914486 9.75158158702124 9.94506456437578 9.59886324975112 9.595330635091 9.52751049916194 8.67916431464836 9.19198816500731 9.58797202912686 9.57076380274351 9.80968817059079 9.76981327344618 9.7139641496086 9.87717315792422 9.82998834208913 9.73389787369521 9.02906146510032 0.0947109662443068 0.0914781347490788 0.0926230946770287 0.0919216797386641 0.095129184696732 0.0958612342646848 0.092008958388918 0.0984390391622205 0.102877855387374 0.0945532445991838 0.0959649725996918 0.091552568702151 0.0947547749667648 0.0934128671254093 0.0925852202051025 0.0920616070424554 0.0946464231082534 0.0959517748172722 0.0959421107263003 5 5 + 26314377 26314912 26314612.727 26313479 26315298 + gene protein_coding_gene TRUE TRUE AT5G65720.1|AT5G65720.2 ATNIFS1/NIFS1 (ARABIOPSIS THALIANA NITROGEN FIXATION S HOMOLOG 1); cysteine desulfurase/ transaminase|ATNIFS1/NIFS1 (ARABIOPSIS THALIANA NITROGEN FIXATION S HOMOLOG 1) cysteine desulfurase whose activity is dependent on AtSufE activation. Identical to Cysteine desulfurase 1, mitochondrial precursor (EC 2.8.1.7) (Protein AtMtNifS) (NIFS) [Arabidopsis Thaliana] (GB:O49543); similar to ATCPNIFS/ATNFS2/ATSUFS/CPNIFS/SUFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE), cysteine desulfurase/ selenocysteine lyase/ transaminase [Arabidopsis thaliana] (TAIR:AT1G08490.1); similar to Cysteine desulfurase NFS1 (ISS) [Ostreococcus tauri] (GB:CAL52881.1); similar to Os09g0338400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062914.1); contains InterPro domain Aminotransferase, class V; (InterPro:IPR000192) 0.663577228463373 7.27259228797443 1.97736288810554e-05 0.00048850656042281 11.2855891538550 18.8425309615129 0.663577228463373 0.0732857929855061 AT5G57170_at 8.00057224546731 8.41073415523364 8.22660888929445 8.2711639996377 9.2906482451656 9.13346299339242 8.2117376279987 8.24727481375203 7.44990252470407 8.01213524047752 8.5572271824198 9.14572645378112 8.72687615058605 8.64249798637458 9.18412215243466 8.93203346379632 8.37003856266088 8.36005547961349 8.26990579083604 0.155120090619425 0.149448701724086 0.148595483717395 0.15336060596335 0.156497085984836 0.154763892952570 0.151525971217 0.156940798460770 0.170697087659565 0.151651614979835 0.148336874075437 0.149452872284462 0.148200428149716 0.153863222876304 0.148200428149716 0.149776068095155 0.162879633590879 0.165180846377582 0.152318914777796 5 5|0 -|/ 23179437 23180340 23179975.889 23179300 23180506 - gene protein_coding_gene TRUE TRUE AT5G57170.1 macrophage migration inhibitory factor family protein / MIF family protein similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G01650.1); similar to Os06g0699500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058472.1); similar to Macrophage migration inhibitory factor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22330.1); contains InterPro domain Macrophage migration inhibitory factor; (InterPro:IPR001398) 0.671032824106051 7.27146688885473 1.98010470033817e-05 0.000488653816573787 11.2842418509861 16.7992603867249 0.671032824106051 0.0766513093395581 AT5G53330_at 8.75381686030017 8.79334226020928 9.61703086499415 9.7706861974154 10.0129126661371 9.23190237949723 8.91721877069487 8.57914695224987 8.65459847801155 8.41184437098553 9.25193806608791 9.27818570524937 9.38870653635869 9.33295288827234 9.02127770911186 9.44715254160296 9.33199190397987 9.3956376801854 8.23922926269078 0.135623503811480 0.130762246155134 0.135232934534938 0.136101129767436 0.136418047689238 0.142603468316415 0.130762246155134 0.131908945344597 0.133440689335374 0.140810079094027 0.137782046333001 0.134666789788224 0.133066356344138 0.133348868804864 0.136615881276178 0.130762246155134 0.139272457494304 0.13236677021124 0.138528550586499 5 5|0 +|/ 21656542 21657861 21657171.2 21656443 21658189 + gene protein_coding_gene TRUE TRUE AT5G53330.1 similar to Os06g0160400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056879.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.884004078887096 7.27142245789872 1.98021303161365e-05 0.000488653816573787 11.2841886556814 18.0801093269799 0.884004078887096 0.149813957264672 AT5G12480_at 6.12817870378428 5.85152443726171 6.24689745982093 6.13067297422482 6.74786312918879 6.14571590540169 5.01486627134383 5.04973181622496 5.06499587490544 4.60918360273944 5.76029824559001 6.09492590563649 5.40595660306029 5.68689563145804 5.58776029758522 5.92260393536872 5.57502622356831 5.4577242405596 5.14428906958695 0.221848087772011 0.222528633896343 0.232141865276644 0.233848970700634 0.235581366562586 0.231413316844023 0.226744718879972 0.218839103941851 0.228214043860309 0.219841748877748 0.228037208347481 0.228755217262942 0.217064006778946 0.23068100574713 0.221381551429244 0.225402132646469 0.217064006778946 0.223212869163238 0.222397174515684 5 0|5 /|- 4047887 4048385 4048164 4047518 4050536 - gene protein_coding_gene TRUE TRUE AT5G12480.1|AT5G12480.2 CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7); calcium- and calmodulin-dependent protein kinase/ kinase|CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) calmodulin-domain protein kinase CDPK isoform 7 (CPK7) similar to CPK14 (calcium-dependent protein kinase 14), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G41860.1); similar to CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G57530.1); similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to calcium-dependent protein kinase 4 [Capsicum annuum] (GB:AAX07129.1); similar to calcium-dependent calmodulin-independent protein kinase isoform 2 [Cicer arietinum] (GB:AAP72282.2); similar to calcium-dependent protein kinase 8 [Nicotiana plumba (GB:CAG27839.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Parvalbumin; (InterPro:IPR008080)|similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to calcium-dependent calmodulin-independent protein kinase isoform 2 [Cicer arietinum] (GB:AAP72282.2); similar to calcium-dependent protein kinase 8 [Nicotiana plumba (GB:CAG27839.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Parvalbumin; (InterPro:IPR008080) 0.776810714807379 7.26492748669849 1.99611795641098e-05 0.000492298455300569 11.2764096000485 11.227375537705 0.776810714807379 0.116583190691255 AT5G59910_at 9.4077876760078 9.58919753864319 10.1457990384241 10.3455357193826 10.1007463389869 10.0732742971691 9.70282817775895 9.92633269559257 9.64370461869308 9.68804204680205 10.4871945126479 10.4172408948382 10.2104629134767 10.3731144677664 10.7178649622046 10.4092060249906 10.1107358191618 10.439598499179 9.56205342587853 0.101831877535352 0.098550560657467 0.100620081156778 0.10460386357301 0.100890044143172 0.102849711996789 0.101027398936928 0.103544324331034 0.105980285538924 0.106120768201811 0.102708450014791 0.105917698839762 0.103874518207500 0.102183115210847 0.107345232293835 0.0998442780274292 0.108049557875977 0.0988823219969029 0.108314081527547 5 5 + 24144467 24144857 24144702.273 24144354 24145161 + gene protein_coding_gene TRUE TRUE AT5G59910.1 histone H2B Identical to Histone H2B.11 (HTB4) [Arabidopsis Thaliana] (GB:P40283;GB:Q5PP00;GB:Q8LDE5;GB:Q9FJE5); similar to histone H2B [Arabidopsis thaliana] (TAIR:AT3G45980.1); similar to Histone H2B (GB:O22582); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124); contains InterPro domain Histone H2B; (InterPro:IPR000558) 0.63710644557432 7.26363321440668 1.99930379946596e-05 0.000492803852468347 11.2748587555773 19.9249096646995 0.63710644557432 0.06081911619086 AT5G58090_at 5.50078584129876 5.8456302912409 5.59817968896507 5.86005568926812 6.55298013435087 6.49757767341755 5.0025368454576 5.72481054578218 5.16533606321181 5.38500772866197 6.31853299480422 6.89186896228535 6.6328170752418 6.59167193707068 7.16863346818115 6.61954664635726 6.10414870709452 5.3547589599687 5.43726513938457 0.193242130890512 0.19375843414378 0.203280601006086 0.195952168827959 0.193579736039771 0.194582278259059 0.199992311359132 0.196991878594352 0.210068330912422 0.191101688124428 0.195098167591762 0.193710459036067 0.197395682584342 0.191101688124428 0.19401754371258 0.192611928037851 0.197027161397238 0.203178034330692 0.192240284115547 5 5 - 23523007 23523285 23523137.455 23522592 23524514 - gene protein_coding_gene TRUE TRUE AT5G58090.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 6) ((1->3)-beta-glucanase 6) (Beta- 1,3-endoglucanase 6) (Beta-1,3-glucanase 6) [Arabidopsis Thaliana] (GB:Q93Z08;GB:Q9FGT5); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G31140.1); similar to Os02g0139300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045844.1); similar to Os08g0224500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061277.1); similar to putative 1,3-beta-glucanase [Oryza sativa (japonica cultivar-group)] (GB:AAP12947.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 0.869900891172445 7.25958665590227 2.00929977824402e-05 0.000494986336449081 11.2700085436009 11.7175447492034 0.869900891172445 0.146048854269688 AT5G01950_at 6.13817053598466 5.93876766840331 6.4319922962531 6.21570871222017 6.5245951264248 6.31603775003994 4.6533431242057 4.31320681325052 6.13797992986189 5.30523459781602 5.76467696168548 6.21661614905192 5.56432178978786 6.30278702717879 5.77965893138457 6.0132546062131 5.1999634845054 6.3923493011185 5.45575658568775 0.183766806931425 0.174223972285196 0.174223972285196 0.184556754007489 0.178856223897857 0.175559944430565 0.190594809052430 0.195190479847968 0.183296274101360 0.177900225128146 0.178477696611830 0.180088610422121 0.183750274229257 0.185027986227583 0.187977915912134 0.178453652817334 0.188630308027463 0.174223972285196 0.176880893741827 5 5|0 -|/ 365061 365602 365286.3 364899 370183 - gene protein_coding_gene TRUE TRUE AT5G01950.1 ATP binding / kinase/ protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G37450.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G53590.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G06840.1); similar to Protein kinase; Adipokinetic hormone [Medicago truncatula] (GB:ABE77704.1); similar to Protein kinase [Medicago truncatula] (GB:ABE77702.1); similar to unkown protein [Oryza sativa (japonica cultivar-group)] (GB:AAW56867.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.691212298008633 7.25503469098394 2.02060864618751e-05 0.00049748958528009 11.2645498741313 11.5850747045916 0.691212298008633 0.0857850282009483 AT5G55300_at 8.0604784373075 8.12680196790787 8.810853734596 8.89617449432129 9.36666876343459 9.11604046986789 8.41691439054142 7.83968840701128 7.86699701022407 8.3164928943108 9.02679179653328 9.03806734444144 8.613270374156 8.78516470720994 8.85474235535065 9.09958953624258 8.85056310246368 8.5836259142724 8.648890663885 0.141157335261645 0.135589526236908 0.136245380632021 0.141896748146514 0.129453866201670 0.135660916260266 0.132579770536620 0.140190409533826 0.160738235337327 0.129453866201670 0.136713370972003 0.137879557145907 0.129453866201670 0.131488190142693 0.136539910718890 0.134645701062137 0.139728801328245 0.138829155990248 0.132207184133483 5 5|0 -|/ 22442066 22443113 22442466.7 22441803 22446683 - gene protein_coding_gene TRUE TRUE AT5G55300.1 TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I Encodes a DNA topoisomerase I. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Identical to DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (TOP1) [Arabidopsis Thaliana] (GB:P30181); similar to TOP1alpha (TOPOISOMERASE I) [Arabidopsis thaliana] (TAIR:AT5G55310.1); similar to DNA topoisomerase I [Daucus carota] (GB:CAB46363.1); similar to topoisomerase I [Pisum sativum] (GB:CAA74890.1); similar to topoisomerase I [Nicotiana tabacum] (GB:AAD08711.1); contains InterPro domain DNA topoisomerase I, DNA binding, eukaryotic-type; (InterPro:IPR008336); contains InterPro domain DNA topoisomerase I, C-terminal, eukaryotic-type; (InterPro:IPR013499); contains InterPro domain DNA breaking-rejoining enzyme, catalytic core; (InterPro:IPR011010); contains InterPro domain DNA topoisomerase I, catalytic core, eukaryotic-type; (InterPro:IPR013500); contains InterPro domain DNA topoisomerase I, C-terminal; (InterPro:IPR001631) 0.757740133361695 7.25430732562371 2.02242205475138e-05 0.000497653463508224 11.2636773624015 17.146171123527 0.757740133361695 0.110495480135027 AT5G59880_at 11.6173631102068 11.7764032398786 12.4826377137929 12.4715599634473 12.3809867898522 12.1552102101941 11.8602427799997 11.8634504133172 11.7279196303989 11.6953180458599 12.5700060747795 12.3822898874926 12.3333280270978 12.1954936787149 12.2053816868578 12.2486605798189 12.3823570396815 12.2124703993446 11.6246959100583 0.085078097277491 0.081816952170062 0.087014603165777 0.0837175758947143 0.0827127376365887 0.0930603545441815 0.0827144916021928 0.0827060345115706 0.0970980331547976 0.0870478162989389 0.0830245282626463 0.0839027894574397 0.0819216445866323 0.0860630541747987 0.0857044025270009 0.0832842613627541 0.0905995056718164 0.0987187180127407 0.0854760038351475 5 5|0 +|/ 24138477 24138799 24138584.222 24137457 24139120 + gene protein_coding_gene TRUE TRUE AT5G59880.1|AT5G59880.2 ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin binding Encodes actin depolymerizing factor 3 (ADF3). Identical to Actin-depolymerizing factor 3 (ADF 3) (AtADF3) (ADF3) [Arabidopsis Thaliana] (GB:Q9ZSK4); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.1); similar to ADF4 (ACTIN DEPOLYMERIZING FACTOR 4), actin binding [Arabidopsis thaliana] (TAIR:AT5G59890.1); similar to actin-depolymerizing factor [Plantago major] (GB:CAJ38384.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) 0.613418838211072 7.24938157392912 2.03474879266355e-05 0.000500402682961222 11.2577667672908 24.075428252834 0.613418838211072 0.0478338343108352 AT5G64130_at 9.78825310364008 9.831040945656 10.0752646004963 10.1624303116376 10.3624397664932 10.2739095563876 9.35005082436546 9.54105644504465 9.95410488459841 9.94162383426588 10.7616932148545 10.8140467337325 10.2993517207644 10.5014010161757 10.8795799559060 10.3805866242605 9.8946647535964 10.6030021762780 9.81367906445507 0.0963041445157088 0.097596146120611 0.0990396527381852 0.102493448970626 0.102267608085518 0.101702398018572 0.0977861364382037 0.100834761948527 0.108802787754934 0.109055508145785 0.098829555786495 0.0969132791504621 0.102293910856874 0.101201293674871 0.099297714402643 0.0974477720892022 0.115939830364732 0.107381248603656 0.101865906590685 5 5|0 -|/ 25681773 25682511 25682113.556 25681576 25683470 - gene protein_coding_gene TRUE TRUE AT5G64130.1|AT5G64130.2|AT5G64130.3 |unknown protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69510.2); similar to Os01g0249300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042590.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72346.1); similar to Os01g0664500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043793.1); contains InterPro domain Lg106-like; (InterPro:IPR012482)| 0.602282787874997 7.24878001257768 2.03625974456237e-05 0.000500490383428852 11.2570447035659 20.1330190453247 0.602282787874997 0.0401208515293971 AT5G11770_at 10.9064146500637 11.1360228673560 11.8326413726383 11.7940489667885 11.6409642401632 11.5611274478747 11.2899901482256 11.4775575786160 10.9516384559291 10.8943770963943 11.5613817469537 11.4354719257035 11.6697481521007 11.6372211722660 11.5701220939384 11.6170239308084 11.5327040893748 11.7177208371893 10.7103924793083 0.0597474255519224 0.0597489349296716 0.0608761237319599 0.0624615282467568 0.0602016876023346 0.062033670875866 0.0603504407409481 0.0608752981534244 0.0618353437503852 0.0598126964944235 0.0588319757093825 0.0588319757093825 0.0588319757093825 0.0617118374356273 0.0604947811592934 0.0599708110888539 0.0697192124716427 0.0588319757093825 0.0593353293574103 5 5|0 -|/ 3791208 3792719 3792215.6 3790807 3793001 - gene protein_coding_gene TRUE TRUE AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial Identical to NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) [Arabidopsis Thaliana] (GB:Q42577); similar to NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (Complex I-20kD) (CI-20kD) (GB:P42027); contains InterPro domain NADH ubiquinone oxidoreductase, 20 kDa subunit; (InterPro:IPR006137); contains InterPro domain NADH dehydrogenase (ubiquinone), 20 kDa subunit; (InterPro:IPR006138) 0.62261871439942 7.24798593756558 2.03825608807572e-05 0.000500697220877091 11.2560914867379 22.6772510360086 0.62261871439942 0.0535532921444408 AT5G66640_at 7.14600521481263 6.94709235688794 7.50555057331866 7.53553561474634 7.29236002843262 7.24556001223655 2.76538447259566 3.17327452604907 5.23120710575989 3.51547772025688 3.28538692582971 3.08446649424394 3.14901221530782 3.72401426250141 2.42918508289648 3.59579873241683 2.86752065432125 3.85253719327072 4.11380100074639 0.253884272469398 0.241271949317334 0.246290077320598 0.245563716330654 0.240064998443343 0.254998186871728 0.244604796575552 0.246757795823098 0.265272516175960 0.239268718477248 0.249352424119044 0.243517724120179 0.24097912499739 0.239268718477248 0.245852854045856 0.242122513393942 0.239268718477248 0.24412987055371 0.247941024412079 5 5 + 26618223 26618961 26618629.455 26616855 26619175 + gene protein_coding_gene TRUE TRUE AT5G66640.1 LIM domain-containing protein-related similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G66620.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1) 0.674237000387342 7.24460870144662 2.04677021756569e-05 0.00050250401034735 11.2520364488109 9.96900475189472 0.674237000387342 0.0791202374366902 AT5G20980_at 4.6858903944341 4.61524037471296 5.30439162136428 5.1571527090766 4.94724319486661 4.89551164047884 4.83397922513652 4.96744473274096 3.94144701707728 4.70784734808554 5.49701234457371 5.57308959542868 5.13391640620191 5.05237658567497 5.67599489143578 5.2886377328849 5.31221722534445 5.19852353956985 4.68505680371495 0.181179555834128 0.177511446695765 0.192257634201355 0.195852438183922 0.188014193785612 0.195443895578071 0.181453536119665 0.181909413021773 0.189175316493732 0.183910681225613 0.179175009761773 0.186169291559320 0.192014036895914 0.177097558521780 0.178221525497476 0.179649809136886 0.191865466412184 0.188479456409694 0.179952468978093 5 0|5 /|- 7124408 7125132 7124672.889 7122802 7128361 - gene protein_coding_gene TRUE TRUE AT5G20980.1|AT5G20980.2 ATMS3 (METHIONINE SYNTHASE 3); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase|ATMS3 (METHIONINE SYNTHASE 3) encodes a plastidic methionine synthase, involved in methionine de novo synthesis in the chloroplast similar to AtMS2 (Arabidopsis thaliana methionine synthase 2), 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G03780.2); similar to ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G17920.2); similar to 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) (GB:Q42699); similar to methionine synthase [Nicotiana suaveolens] (GB:ABI95860.1); similar to methionine synthase [Solanum tuberosum] (GB:AAF74983.1); contains InterPro domain 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; (InterPro:IPR006276); contains InterPro domain Prismane-like; (InterPro:IPR011254); contains InterPro domain Cobalamin-independent synthase MetE, N-terminal; (InterPro:IPR013215); contains InterPro domain Methionine synthase, vitamin-B12 independent; (InterPro:IPR002629) 0.598561713435238 7.24323844061003 2.05023561577814e-05 0.000503069938659732 11.2503907349348 9.81898411815063 0.598561713435238 0.0375811295040767 AT5G64500_at 9.03333429602935 8.96170794620638 9.69793863371094 9.54890667851294 9.95146902853456 9.64312585363077 8.99764555423691 8.49511126778883 9.04256060451519 8.71042984957054 9.74409385319653 9.48595594407173 9.53971772974895 9.66960097707192 9.3294355196291 9.41821750495003 9.4033760032128 9.4631499798626 8.82138797028464 0.111918757127400 0.109845716927668 0.115789106391442 0.117398212901606 0.116993540273539 0.116718714399362 0.114709348121694 0.116772440925149 0.128541107622548 0.121010320894140 0.10943325827585 0.109513753224303 0.109931400466930 0.110333278977212 0.109234127643834 0.110715143791391 0.117386456336620 0.118332222401890 0.122418643145332 5 5|0 +|/ 25799582 25800657 25800246.4 25797608 25800880 + gene protein_coding_gene TRUE TRUE AT5G64500.1 membrane protein-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT2G22730.1); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE84791.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.743488790021555 7.24189392077281 2.05364206141327e-05 0.000503620769665298 11.2487756865317 18.4735646975437 0.743488790021555 0.105967841311157 AT5G40770_at 8.00741209580618 7.93205429779225 8.41084670838618 8.73561760231362 8.42745284048035 8.23477015900471 8.16406054418889 8.05261418971495 7.24988161796103 6.7056798403279 7.55300130197889 7.90721864116839 7.35489546615709 7.60779362435127 8.20459941998947 8.04109816120027 7.80051900085302 7.46814892992777 6.59678254646967 0.163725508807619 0.161301376033733 0.165209315353330 0.164715986853771 0.165055391349747 0.169170223626822 0.162837749361105 0.167918819209748 0.170997043820653 0.173114853422392 0.164042669669498 0.16574531367564 0.1669238209454 0.175465540128999 0.176210116203138 0.161301376033733 0.163452802462670 0.169323130843977 0.174183249229387 5 5 - 16332829 16333304 16333043.091 16332078 16333947 - gene protein_coding_gene TRUE TRUE AT5G40770.1 ATPHB3 (PROHIBITIN 3) prohibitin 3 similar to ATPHB4 (PROHIBITIN 4) [Arabidopsis thaliana] (TAIR:AT3G27280.1); similar to mitochondrial prohibitin 1 [Petunia x hybrida] (GB:AAW83328.1); similar to PHB1 [Nicotiana benthamiana] (GB:AAZ30376.1); contains InterPro domain Prohibitin; (InterPro:IPR000163); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 0.652257264477194 7.24087192828969 2.05623543886655e-05 0.000503971699489159 11.2475478949653 15.5420738812723 0.652257264477194 0.0693735195918681 AT5G59440_at 5.27246258309118 5.83607678532042 6.45938341972137 6.38167168135597 7.07156079568728 6.66019827237915 5.58035892196566 5.50167385914804 4.08927303091134 4.61842611730222 4.75442601591995 5.30121021075667 5.67028853561662 5.49011987928754 4.81822794914392 5.41701658342155 5.64819251293518 5.21059813108912 5.69812936544737 0.247174207373907 0.235953168470967 0.254466299344634 0.243743851555558 0.238080095271556 0.256468254593330 0.239594086127002 0.245365101655096 0.270603552121066 0.247467460659556 0.243831049688943 0.236247248803277 0.235953168470967 0.243675188638287 0.244086985374572 0.240086996255968 0.252817556990240 0.250069248952468 0.238569553545527 5 5 + 23989220 23989919 23989525.364 23988457 23990150 + gene protein_coding_gene TRUE TRUE AT5G59440.1|AT5G59440.2|AT5G59440.3 thymidylate kinase family protein similar to Os07g0639900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060418.1); similar to putative thymidylate kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC45213.1); contains InterPro domain Thymidylate kinase; (InterPro:IPR000062) 0.791188822144481 7.23892806819064 2.06117786537954e-05 0.000504897646171213 11.2452122038380 11.1407746974128 0.791188822144481 0.122259237265664 AT5G66680_at 9.71365055358719 9.85282493251502 10.0736462798814 10.2913034449809 10.3003570013287 9.95959981553644 9.4025424897637 9.35902619022206 9.1613096794947 9.02842272299285 9.79981328088972 10.0653068473095 9.60041727241734 9.65101421693674 9.96517807298316 9.61061182931336 9.56179273947002 9.90581089927966 8.86823726155672 0.103814643309249 0.0992465282666593 0.111528954017221 0.104537602715090 0.101089952495355 0.107833967388518 0.108108437463066 0.0995100226252792 0.120432093177448 0.108516336049346 0.103755981916389 0.102520425012359 0.101208796703680 0.107597235628983 0.101774915403108 0.101919598765980 0.111435991040729 0.102495293254023 0.108443097513361 5 5|0 -|/ 26635243 26636437 26635689.875 26634770 26637893 - gene protein_coding_gene TRUE TRUE AT5G66680.1 DGL1 (defective glycosylation 1); dolichyl-diphosphooligosaccharide-protein glycotransferase Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins. similar to MGC80921 protein [Xenopus laevis] (GB:AAH73434.1); similar to Os07g0209000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059165.1); contains InterPro domain Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit; (InterPro:IPR005013) 0.662442758693366 7.2335745013645 2.07485605606251e-05 0.000507961215724286 11.2387768210323 19.2637770215634 0.662442758693366 0.0743839750981063 AT5G10940_at 7.1457832768024 6.93288859326192 8.08565964751114 7.87002230753302 8.43364508858246 7.90781799698286 7.27552080234203 6.86209781121878 7.32356937222432 7.12406317674248 7.75081232802007 7.84446946783565 7.68365669740184 7.86289070700465 7.94277866754004 7.9967152349771 8.01167656344325 7.77609424236612 7.35658142573177 0.160809031880918 0.151886751610947 0.151886751610947 0.155173214887824 0.159256243029955 0.154624152398541 0.162749761480523 0.161981124009276 0.165438956667864 0.160695473304736 0.151886751610947 0.156122324531333 0.152547105224551 0.156643235494774 0.151886751610947 0.151886751610947 0.160322210077605 0.160206351249870 0.157861337830113 5 5|0 -|/ 3449141 3450046 3449620.667 3448637 3454232 - gene protein_coding_gene TRUE TRUE AT5G10940.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G45620.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94369.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.805389526460078 7.23261435830071 2.07731951882581e-05 0.000508277314511794 11.2376222424987 15.1275334722659 0.805389526460078 0.127078731624370 AT5G13410_at 8.74434264062366 8.65330704638282 9.29472770394775 9.19648565419573 9.79667673234468 9.39308702712705 9.43560197800246 9.19065729138843 9.2317526178788 9.34636949235474 10.3067865645467 10.4014340468329 9.86506392930831 10.3529293846755 10.3719342511644 10.3300421939326 9.91209247297665 10.178821124885 9.1894838233781 0.112471644115387 0.108366380068205 0.108986645715513 0.109205314727775 0.111014407623372 0.110064418651005 0.110926085051154 0.117857796225162 0.127675065503119 0.112627086478537 0.109086150522587 0.107955489204985 0.110830255814367 0.108712320861107 0.115859092323152 0.103677888393267 0.109134316330844 0.104769614700420 0.115452270045091 5 5|0 -|/ 4299851 4301338 4300279.111 4299737 4301783 - gene protein_coding_gene TRUE TRUE AT5G13410.1 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G19830.1); similar to Os07g0133700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058838.1); similar to FKBP-type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL50076.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) 0.686643195903754 7.22923573780164 2.08601321913379e-05 0.000509932533114682 11.2335584230339 18.9484890795403 0.686643195903754 0.0849241019646379 AT5G52720_at 3.25935827292691 3.02741052643987 6.32147580590431 5.4129647944137 3.39363323226961 3.44439271314220 2.39324494238014 2.45759953937026 2.91132647859517 2.54225551077339 2.44509363114978 2.36230330197632 2.40952090826303 2.55679809955770 3.10132314739675 2.31140760187274 2.83592471828679 2.77701725674481 2.38042876487590 0.312674802875526 0.312674802875526 0.423011425500633 0.407146534025557 0.315301067038740 0.318463496250158 0.327690687474794 0.312763264926043 0.312674802875526 0.313621529990176 0.313868577391996 0.321989450341607 0.319274994750160 0.321991545271237 0.312674802875526 0.317135229649117 0.3212811389739 0.312674802875526 0.312674802875526 5 5 + 21396310 21396728 21396579.375 21396083 21396970 + gene protein_coding_gene TRUE TRUE AT5G52720.1 metal ion binding similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52670.1); similar to Unknown (protein for MGC:78286) [Mus musculus] (GB:AAH71252.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121); contains InterPro domain Peptidoglycan binding-like; (InterPro:IPR009070) 0.923649990613832 7.2290715856813 2.08643660481804e-05 0.000509932533114682 11.2333609402535 6.31939022897461 0.923649990613832 0.162883886483336 AT5G57230_at 3.37615370450339 3.34263418909436 3.88925540073218 3.67194365860827 4.72576040726582 4.13448804021215 2.53647092933973 2.73336365326073 2.51841945164763 2.37071898388016 2.91048171500100 2.8950153184993 3.16154465403504 2.82169024982355 2.88352496041802 2.47363624905481 2.96064903037844 3.08825563546263 2.53581528439813 0.252429581369277 0.238313220383970 0.240661799155118 0.242501905852876 0.236395821892121 0.245353649126636 0.231233526409961 0.231233526409961 0.240384741741341 0.235251096123983 0.232600368551094 0.231886240261197 0.231233526409961 0.231233526409961 0.236530123120944 0.236662284762692 0.244693440032497 0.233418458315867 0.237351576819592 5 5|0 +|/ 23207946 23208643 23208133.444 23207798 23208711 + gene protein_coding_gene TRUE TRUE AT5G57230.1 similar to Os06g0482200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057653.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.766285705465254 7.22804233083259 2.08909339881648e-05 0.00051029421127123 11.2321226136144 6.23842589782345 0.766285705465254 0.114362518005762 AT5G63220_at 4.77872953037241 4.35174907244864 4.87742185747436 4.78151233068408 5.71055475089174 4.7761318121184 4.44369924810842 4.01927068048497 3.75855271855469 3.3574442614971 4.75092322872719 5.09974436974708 5.00027442507901 4.93625844127493 5.54238336915036 4.71531159435434 4.39754782218083 4.83787727318855 3.33942376825265 0.300077578306217 0.286487869107105 0.290383280529425 0.293659799429684 0.288270745472612 0.294903061697503 0.284624832518903 0.285871508665973 0.293071890725407 0.286983283800896 0.290375476749417 0.298214970341740 0.284624832518903 0.284993560617458 0.289395424365432 0.292189401702249 0.291857698506189 0.305125698435891 0.289268607609021 5 5|0 -|/ 25370844 25371606 25371265.857 25370272 25372726 - gene protein_coding_gene TRUE TRUE AT5G63220.1 similar to Protein of unknown function (DUF410) [Medicago truncatula] (GB:ABE77873.1); contains InterPro domain Protein of unknown function DUF410; (InterPro:IPR007317) 1.03147143548325 7.22386496735277 2.09991382288786e-05 0.000512648455512059 11.2270952127424 8.91497381777167 1.03147143548325 0.193077886934277 AT5G51140_at 8.42783054376662 8.3742871459925 9.25208866234107 9.11501899154511 9.51807538995185 9.34405541157069 8.19726556701784 8.42596128015472 8.80794580683875 8.55425452188407 9.3554840838414 8.97280858639778 9.09009625047303 8.76923657681646 9.0335418495043 9.24460036100783 8.58843735111566 8.98498565251408 8.76386121635063 0.124844127757070 0.120632092278393 0.124220730524124 0.119220141138776 0.115087953262652 0.124241206681663 0.118599354454140 0.115087953262652 0.129617805322046 0.120248528093776 0.117052667813479 0.120009202891154 0.118290532965526 0.137123087001453 0.119383001954993 0.115087953262652 0.130619988122070 0.129010931254398 0.116322992825365 5 5|0 -|/ 20801511 20802127 20801834.778 20801157 20804040 - gene protein_coding_gene TRUE TRUE AT5G51140.1 pseudouridine synthase family protein similar to pseudouridine synthase family protein [Arabidopsis thaliana] (TAIR:AT3G52260.2); similar to Pseudouridine synthase [Medicago truncatula] (GB:ABE89376.1); contains InterPro domain Pseudouridine synthase, RluD; (InterPro:IPR006225); contains InterPro domain Pseudouridine synthase; (InterPro:IPR006145); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) 0.623592568443466 7.21258286978266 2.12944024596503e-05 0.000519564144501162 11.2135053834565 17.6886158843675 0.623592568443466 0.0558727215715826 AT5G20180_at 8.91078067924706 9.14853562041436 9.64974234023 9.8679692917376 9.8453291849197 9.45670632481457 9.32653233184896 9.524049000019 8.32791518025535 8.80576839124458 9.621409933432 9.64685500437065 9.7871532830381 9.42528333513655 9.50928102010816 9.63804832958161 9.01654675875856 9.44048528748614 8.58544410980707 0.128292749760547 0.124702523258114 0.129646922238116 0.124921878672395 0.128220762628983 0.137492264385071 0.131510700551458 0.130388999603127 0.167370625869517 0.130392253070060 0.130340691387267 0.127793118712756 0.125665522419915 0.136444555151645 0.125940385025781 0.125088404780350 0.130343401616343 0.133474658714670 0.131891114156991 5 5|0 +|/ 6811382 6811861 6811651.8 6810922 6812148 + gene protein_coding_gene TRUE TRUE AT5G20180.1|AT5G20180.2 ribosomal protein L36 family protein similar to Os03g0811800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051675.1); similar to Ribosomal protein L36 [Lactobacillus reuteri 100-23] (GB:ZP_01275107.1); contains InterPro domain Ribosomal protein L36; (InterPro:IPR000473) 0.707526343048216 7.21151480323925 2.13225857929385e-05 0.000519959187264529 11.2122179396281 18.5080433113662 0.707526343048216 0.0938637674173817 AT5G23405_at 4.28447530609697 4.47390998639497 5.98297304597755 5.78729404797385 6.7556996604524 5.5067065506162 3.65419709868719 3.76856004401875 3.33120197027265 3.21663523157889 3.26258918491144 3.93740174292166 3.40739302851055 3.37170127744169 3.72455861387817 3.87412101111104 4.24513570921393 3.90808208046459 3.66279144657042 0.245277936863574 0.249450249835402 0.257311756126050 0.253132163024069 0.268347620190373 0.253127652257204 0.241760151812998 0.249266676126197 0.242298759620576 0.25035972660283 0.250442469321918 0.245028444728402 0.253414628031849 0.246515079217854 0.247442698919388 0.241760151812998 0.252653018402521 0.241760151812998 0.245136632183390 5 5|0 -|/ 7883154 7884219 7883667.333 7882851 7884363 - gene protein_coding_gene TRUE TRUE AT5G23405.1|AT5G23405.2 high mobility group (HMG1/2) family protein similar to HMGB6 (High mobility group B 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G23420.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); similar to HMG1/2-like protein (GB:P40620); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071)|similar to HMGB6 (High mobility group B 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G23420.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 1.13785633285242 7.20446737221717 2.15095585888281e-05 0.000524223749448141 11.2037190576037 8.58668482445921 1.13785633285242 0.222106640000979 AT5G48970_at 5.88588039360876 5.72252003312601 7.0373323395823 6.43898018407778 7.07343103162392 6.55357933717735 6.11327425620783 5.65031502790537 5.02438519511324 4.86270704185211 6.233455292876 6.25803053551462 5.7661892547818 6.05550383629428 5.83267182031013 5.94546522155946 5.8792680845798 5.61621391359423 5.27719032225669 0.222065657466444 0.210461942336127 0.216633755853976 0.213932641824034 0.214751202943550 0.219570950182907 0.219260496999186 0.224328312745646 0.235348954760481 0.218775822279459 0.23171300398094 0.210154016090245 0.221485250223786 0.217651476609721 0.216764874093078 0.213232906120373 0.213750855282841 0.223991710659975 0.223269237949348 5 5 - 19874278 19875602 19875011.364 19874056 19876989 - gene protein_coding_gene TRUE TRUE AT5G48970.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G21390.1); similar to Os01g0934200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045309.1); similar to Mitochondrial FAD carrier protein (ISS) [Ostreococcus tauri] (GB:CAL56581.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.91321109363406 7.1889235783669 2.19282198708373e-05 0.000534126981817575 11.1849497835544 11.8109693744201 0.91321109363406 0.161348668275385 AT5G08260_at 7.88407238516668 7.88537777851109 8.13822909566682 8.20788093126399 8.79925165968703 8.09055730192715 7.90255897750337 7.83246746104022 6.6056349923686 7.08527982211303 7.86788425144968 8.3923353990675 7.7873719131871 7.73685174020178 8.27895996596544 6.96914353977627 7.61597449912747 8.21064965384765 6.43976888484951 0.175235316547187 0.175213192699576 0.178251497052267 0.178806518324928 0.182610776983903 0.178392595163058 0.172851107224029 0.179310535018571 0.188766636581676 0.172508832138007 0.175356227989922 0.169813880325638 0.171661720086350 0.184649863225908 0.182889397327058 0.169813880325638 0.174103350781994 0.17588197519786 0.184861098604268 5 5|0 +|/ 2660356 2661130 2660759 2657152 2661417 + gene protein_coding_gene TRUE TRUE AT5G08260.1 SCPL35 (serine carboxypeptidase-like 35); serine carboxypeptidase similar to SCPL34, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G23210.1); similar to OSIGBa0153E02-OSIGBa0093I20.21 [Oryza sativa (indica cultivar-group)] (GB:CAH67892.1); similar to serine carboxypeptidase (carboxypeptidase D), putative [Musa acuminata] (GB:ABF70080.1); similar to OSJNBa0038O10.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05642.2); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.79001453356586 7.1843890034069 2.20520035091544e-05 0.000536840504516121 11.1794679712445 15.3763615838982 0.79001453356586 0.123829481525464 AT5G43940_at 11.6346768267150 11.801374184169 12.0299737426865 12.23115780968 12.0630949350641 12.004805025301 11.3077677641088 11.4228557188761 11.3719236634517 11.4214786057175 12.1186015816334 12.199605579751 12.0006803662744 11.986418397561 12.1373255852073 11.8822650023691 11.8422382750750 12.2816788764120 11.3258780379277 0.0717898552844129 0.0698150792789074 0.0697695381037659 0.0703978284239292 0.0712178861845483 0.0747985455681766 0.0734412898913622 0.070018634431124 0.079003858601741 0.0715045399189084 0.0750660925087776 0.0724434626729476 0.0700431208790437 0.0744664938129349 0.073112756776209 0.0702367188096769 0.0744706115349108 0.0725032068996592 0.070944463815551 5 5|0 +|/ 17702703 17703582 17703201.6 17701418 17703755 + gene protein_coding_gene TRUE TRUE AT5G43940.1 ADH2 (ALCOHOL DEHYDROGENASE 2); formaldehyde dehydrogenase (glutathione) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Identical to Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH- FDH) (ADH2) [Arabidopsis Thaliana] (GB:Q96533;GB:Q43384;GB:Q9FND2); similar to ADH1 (ALCOHOL DEHYDROGENASE 1), alcohol dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G77120.1); similar to class III ADH enzyme [Oryza sativa] (GB:AAB19117.1); similar to alcohol dehydrogenase class III-like protein [Solanum tuberosum] (GB:ABB72806.1); similar to glutathione-dependent formaldehyde dehydrogenase (GB:AAB06322.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.611798763526072 7.18210796587517 2.21145550875900e-05 0.00053806116683865 11.1767093710414 23.5265608226922 0.611798763526072 0.0504257620100592 AT5G65470_at 5.43928751184712 5.6065743618746 6.53398615401727 7.21547033920136 7.20940472088943 6.63549034630727 7.96583897675001 7.61780726011539 6.63357227474809 6.61492451017972 9.15840431600922 8.59265885804965 8.36174581239559 8.49084927887288 8.03854404759693 7.99898199769575 7.49544448275778 8.0068083958403 6.66569546249154 0.251185400016188 0.245538000032929 0.259921224922428 0.242151201240741 0.234294678926463 0.245814508048671 0.236940214370361 0.238275042264162 0.25592513946645 0.239834501390937 0.240081274869804 0.234294678926463 0.237352023225398 0.245129666038149 0.241475139101221 0.238018015351035 0.247859599945128 0.244895086662651 0.234631065208151 5 5|0 +|/ 26191449 26192092 26191777.4 26189357 26192259 + gene protein_coding_gene TRUE TRUE AT5G65470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24530.1); similar to putative auxin growth promotor protein [Lycopersicon esculentum] (GB:AAK84479.1); similar to Os09g0412200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063155.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) 0.935538214318098 7.1815491485351 2.21299083479792e-05 0.000538132738955091 11.1760334491360 14.230979324438 0.935538214318098 0.168042171006253 AT5G25510_at 6.81632264164079 6.9921177330427 7.54955277167754 7.5046211585157 8.119610227343 7.88791934112547 7.51283945521492 6.95153421199411 6.69407080546376 6.473107253609 7.77940359872854 7.51788660098317 7.49849435567473 7.25337656439382 7.65746588712749 7.42292617471072 6.93601584569326 6.86580214467674 6.53787115774471 0.187159606123561 0.18259649472825 0.184068053243119 0.186038204073069 0.190745025038611 0.182005932931305 0.188532266753230 0.191784650266118 0.199521208675192 0.191535110803603 0.185037132239576 0.180524439247861 0.181976490382387 0.190165984129996 0.191669681516729 0.181872097372185 0.197455972538239 0.197397535977181 0.181740457231325 5 5 - 8882746 8883387 8883076.818 8882471 8884837 - gene protein_coding_gene TRUE TRUE AT5G25510.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform (PP2A, B' subunit, iota isoform) (AtB' iota) (B'IOTA) [Arabidopsis Thaliana] (GB:Q93YV6); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B' (B'gamma) [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] (GB:CAC85920.1); contains InterPro domain Protein phosphatase 2A, regulatory B subunit, B56; (InterPro:IPR002554) 0.747647010875846 7.18012540585983 2.21690769764898e-05 0.000538671657126787 11.1743111553319 14.3842002602881 0.747647010875846 0.109677208428946 AT5G51820_at 9.65102227021853 9.48242501000906 9.74681564835621 9.60397479906327 9.96178518614742 9.59599044726516 9.58507314059685 9.41727895131104 8.70259085478643 9.2924954331377 9.97854719258987 10.1384289508010 10.0126316080403 10.1308217104184 10.2564154156700 9.95261456216797 10.1397979336310 9.91964068415948 8.76908442247591 0.105737429736456 0.105461219142261 0.106016910160483 0.114145497998638 0.107769497263870 0.107062799815021 0.101542716346104 0.112370105371567 0.118565445948489 0.107869518410244 0.104095048091640 0.101301498360739 0.104476518123450 0.11106194902847 0.109692078910087 0.103724224924104 0.107380612666954 0.101542795221757 0.109303053822597 5 5|0 -|/ 21080757 21082189 21081347.125 21080594 21085283 - gene protein_coding_gene TRUE TRUE AT5G51820.1 PGM (PHOSPHOGLUCOMUTASE) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts. Identical to Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) (PGMP) [Arabidopsis Thaliana] (GB:Q9SCY0); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G23190.1); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70730.1); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SM59); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9M4G5); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SMM0); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; (InterPro:IPR005845); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; (InterPro:IPR005846); contains InterPro domain Phosphoglucomutase/phosphomannomutase; (InterPro:IPR005841) 0.668956848779447 7.17962383562679 2.21828934762023e-05 0.000538671657126787 11.1737043419339 19.1242969286133 0.668956848779447 0.0794524899193264 AT5G63490_at 7.02927191410914 7.32811228487457 7.94486474833418 7.9176027660336 7.96518150140974 7.55112289372093 7.34734515858622 7.21126131977569 6.3255904912056 7.04787857172403 7.33196301959638 7.61379648668525 7.10501028112268 7.53553625054244 7.28359790056744 7.93270288409981 7.39599282166915 7.3060831921038 6.59701412950559 0.168450515655745 0.160843785607666 0.165062258950195 0.161412265419719 0.156044164141281 0.165891817691573 0.155656482715977 0.159991845386704 0.182731430209242 0.163041428775797 0.167991385093501 0.155656482715977 0.158615347136423 0.158954058482110 0.155656482715977 0.157592208860652 0.167403838307225 0.157564792496100 0.159677885638769 5 0|5 /|- 25435960 25436871 25436366.222 25435820 25439410 - gene protein_coding_gene TRUE TRUE AT5G63490.1 CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50530.1); similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50640.1); similar to Octicosapeptide/Phox/Bem1p; CBS [Medicago truncatula] (GB:ABE86173.1); similar to Os12g0169400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066263.1); similar to CBS domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95929.1); contains InterPro domain CBS; (InterPro:IPR000644); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.698476465887419 7.17938982982703 2.21893426882553e-05 0.000538671657126787 11.1734212234389 14.5843018660356 0.698476465887419 0.0915739033519764 AT5G08440_at 4.62596175393781 4.66191758812543 5.83708327551642 5.90187475889134 6.50432851911312 5.54530590196632 5.44151415148941 5.15806173094555 3.93890666905124 4.28637204803048 4.74009785900927 4.98046918315731 5.39007483442899 5.18194404893244 4.85967084094351 5.08918918188817 4.68695581862063 4.98966171561038 3.94424943646447 0.214022287289730 0.21251516038938 0.225662570876883 0.216872459301826 0.218237057807806 0.216231112224761 0.220959987449607 0.21251516038938 0.225317468161793 0.218801142044224 0.215037690083082 0.214567101336444 0.218548419753188 0.220890302816328 0.220446988033315 0.214017486581860 0.216885325423414 0.221475595053619 0.21251516038938 5 5|0 +|/ 2723800 2724804 2724359.2 2720670 2727168 + gene protein_coding_gene TRUE TRUE AT5G08440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23490.1); similar to Os05g0100900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054377.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98470.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98471.1); contains domain RNA bacteriophage capsid protein (SSF55405) 0.954266429277847 7.1768630050473 2.22591109280522e-05 0.0005400629740124 11.1703635922074 9.9826396199178 0.954266429277847 0.173535124568630 AT5G04420_at 5.73361440924006 5.69797972746083 6.06183868742281 5.95560318246329 6.58589094925065 6.34470918729971 5.8829074391032 5.54534081775475 6.07340840980303 6.30825274183786 7.15825246012486 7.58836638207216 6.74331437797973 7.13894661968574 7.27727457542279 6.74542665611069 6.29321785763648 7.31190353616906 6.33951213358219 0.163779225900016 0.16032623120138 0.161894927520084 0.164743025505783 0.172511491701027 0.169873007937117 0.170524734490175 0.167256687557232 0.181323634767452 0.164001064915683 0.164305739346971 0.170616021770808 0.165813156007512 0.170740396445845 0.162079898230254 0.167305593387525 0.178292496235705 0.165489378076271 0.162358739027579 5 5|0 -|/ 1246887 1247678 1247301.111 1246605 1249944 - gene protein_coding_gene TRUE TRUE AT5G04420.1|AT5G04420.2|AT5G04420.3 kelch repeat-containing protein similar to ACBP4 (ACYL-COA BINDING PROTEIN 4, ACYL-COA-BINDING DOMAIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.2); similar to Os02g0822800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048563.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR88580.1); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.656873308147619 7.17313434013534 2.23624952476293e-05 0.000542267890547832 11.1658500426202 12.6122250016117 0.656873308147619 0.0743683524842231 AT5G53130_at 8.6157656885295 8.83553475880847 9.76469606647998 9.82260131019465 9.64132672675906 9.70813282941725 9.20473714159093 9.09714440777675 8.95883155478885 8.86387471102807 9.26526623268606 9.12435223101859 9.08150427648003 9.22682106039337 8.95653387586474 9.15804804615638 9.24741392365352 9.2136238952964 8.4273361144273 0.123077041384027 0.121793345822773 0.129324333402763 0.124370387751800 0.126714999203791 0.127599138045742 0.123624040391818 0.125109296740724 0.133857419849901 0.123840103306383 0.117702641452145 0.118908931220662 0.119745986493235 0.124842626594273 0.124446531431982 0.119381498202412 0.132218050840888 0.125589032320741 0.135073911555771 5 5 - 21555085 21555631 21555341.727 21554947 21558255 - gene protein_coding_gene TRUE TRUE AT5G53130.1 CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1); calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel member of Cyclic nucleotide gated channel family Identical to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic nucleotide- and calmodulin-regulated ion channel 1) (CNGC1) [Arabidopsis Thaliana] (GB:O65717); similar to ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT1G01340.1); similar to ATCNGC13 (cyclic nucleotide gated channel 13), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G01010.1); similar to ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G46430.1); similar to cyclic nucleotide-gated channel C [Phaseolus vulgaris] (GB:AAN65366.1); similar to cyclic nucleotide-gated calmodulin-binding ion channel [Nicotiana tabacum] (GB:AAF33670.1); similar to putative calmodulin binding transporter protein [Hordeum vulgare subsp. vulgare] (GB:CAA05637.1); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.602537524990943 7.17034045565655 2.24403000060044e-05 0.000543850410344339 11.1624667871194 18.2908471509154 0.602537524990943 0.0450243915973047 AT5G41400_at 5.26118698743198 5.93692010290292 8.60019907950317 9.15659603536803 6.41342771557969 7.96905573214135 4.28116729704292 6.04894991544519 4.0664611183018 3.99793528327612 4.62254874303357 5.37980068524327 5.50012711012613 5.60670639800749 5.90743508210711 5.5862303784059 6.52378760276215 4.54300743530293 4.27624335205360 0.263443807744727 0.251384073585393 0.256774138199807 0.254480375714725 0.254287490052006 0.260948704637159 0.263861375187037 0.255368283865248 0.261511780280838 0.252360711210839 0.256752715292166 0.253969467904291 0.251651670029582 0.264722236321779 0.250322842496303 0.250322842496303 0.26095222468334 0.26259063369512 0.250322842496303 5 5 - 16586873 16587315 16587086.909 16586605 16587405 - gene protein_coding_gene TRUE TRUE AT5G41400.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63840.1); similar to Os02g0681200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047745.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABD28706.1); similar to Os04g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053644.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.99896120488602 7.16902639708055 2.24769950163098e-05 0.000544435405974297 11.160875154683 11.4945638651356 1.99896120488602 0.434750609090885 AT5G57360_at 7.20932996612832 7.4890279983269 7.67484430085227 8.25487900753125 8.60952257125172 8.33268855715255 7.17013299508598 7.746463295108 7.31587406251944 6.70905183782912 7.95025736192242 7.77810999957984 8.3554746705804 8.2611232379974 7.54791446666198 8.1561535578502 8.26212247888715 8.09277658253872 7.19747761835486 0.146161826656752 0.145606545599685 0.149747819101299 0.146580150164103 0.144524559141477 0.142349963155269 0.145449419211662 0.144300498423695 0.142642441612758 0.164699137226509 0.142117628128479 0.150965883931512 0.142117628128479 0.148027301138226 0.149318368372152 0.144183465816285 0.151505926336976 0.146184544104399 0.149849598573843 5 5 + 23260910 23261350 23261109.636 23258653 23261816 + gene protein_coding_gene TRUE TRUE AT5G57360.1 ZTL (ZEITLUPE); ubiquitin-protein ligase Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Adagio protein 1 (Protein ZEITLUPE) (LOV kelch protein 1) (Flavin- binding kelch repeat F-box protein 1-like protein 2) (FKF1-like protein 2) (F-box only protein 2b) (FBX2b) (Clock-associated PAS protein ZTL) (ADO1) [Arabidopsis Thaliana] (GB:Q94BT6;GB:Q9LDF6); similar to LKP2 (LOV KELCH PROTEIN 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G18915.2); similar to FKF1 (FLAVIN-BINDING KELCH DOMAIN F BOX PROTEIN), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G68050.1); similar to ZTL [Ipomoea nil] (GB:ABC25060.2); similar to ZEITLUPE [Mesembryanthemum crystallinum] (GB:AAQ73527.1); similar to Cyclin-like F-box; Galactose oxidase, central [Medicago truncatula] (GB:ABE90708.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.895301041901219 7.16403673106161 2.26169210210797e-05 0.00054751880249864 11.1548293292142 15.373174111798 0.895301041901219 0.157038400682273 AT5G53220_at 2.04660890855376 2.04118286088579 2.86097445194519 3.03269732361505 3.06520625702181 2.75940208836167 1.89587603046903 1.59787377098527 2.49540936798727 2.05281585542482 2.93940502295074 3.04154576176543 2.58203857056329 2.54864892646103 2.25424824306777 2.59007534073358 2.8130315509259 2.17151453224863 2.40078466566140 0.199773620979002 0.200324818281791 0.214492906751532 0.204692793922004 0.211461775179636 0.209219616961411 0.206477288522562 0.203412461371342 0.208321941454419 0.207222965082488 0.205432809808134 0.199773620979002 0.200994645578858 0.204681858440795 0.202880510461208 0.204248412909625 0.210246999940702 0.206751565217898 0.21003543765881 5 5|0 +|/ 21614578 21615195 21614970.2 21613216 21615450 + gene protein_coding_gene TRUE TRUE AT5G53220.1|AT5G53220.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to OSJNBb0076A22.19 [Oryza sativa (japonica cultivar-group)] (GB:CAD40807.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72405.1); similar to Os01g0221300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042431.1) 0.667705750705424 7.16129267815587 2.26942726446267e-05 0.000549084779256729 11.1515029782406 4.87942777312005 0.667705750705424 0.0796502251557118 AT5G13420_at 8.43359285485317 8.39024192517541 9.15812364344568 9.13058359601606 9.07921393122695 8.76075047140133 9.1577443651125 9.07147766230942 8.2765582517304 8.59426139654726 9.49023733039107 9.2540970462081 9.16085782717304 9.42699883225426 9.38617322647858 9.14610399740502 9.34749406979196 9.53012560120605 8.22919695256904 0.0920086861439976 0.0921013136387059 0.099125705947026 0.0937830825097963 0.0916905141524451 0.0959820381373744 0.0943389613703329 0.0944286006745327 0.112885051013679 0.0975460345282309 0.0901539404931295 0.0925885360068272 0.0889552898510488 0.090371690165018 0.0889552898510488 0.096641465631049 0.0917049000276868 0.09742138412134 0.110900770642162 5 5|0 -|/ 4302093 4302793 4302465.444 4301795 4304315 - gene protein_coding_gene TRUE TRUE AT5G13420.1 transaldolase, putative similar to transaldolase [Solanum tuberosum] (GB:AAB54016.1); similar to transaldolase-like protein [Solanum tuberosum] (GB:ABB17002.1); similar to transaldolase [Lycopersicon esculentum] (GB:AAG16981.1); contains InterPro domain Transaldolase; (InterPro:IPR001585); contains InterPro domain Transaldolase subfamily; (InterPro:IPR004732) 0.62249624987058 7.16064755296113 2.27124993112525e-05 0.000549219286950861 11.1507208040210 17.7524326520154 0.62249624987058 0.057785405375847 AT5G62390_at 9.39169105615232 9.6129388477213 9.70114409323789 9.77639404098314 10.2282139082642 10.1381297710684 9.16047795511878 9.26667096658977 9.69417293132687 9.17556869389093 10.3006948090045 10.3355914363285 9.81567962210997 10.1073017972164 10.4180507195346 10.0207530293131 9.37370012307987 9.99728439670483 9.45174633103894 0.0953687846054464 0.0934652490859269 0.0981184414416487 0.0951911759463744 0.0953891799654312 0.100301813891778 0.100891456909828 0.0950662161810998 0.107361581792756 0.108161823447964 0.0913484290460712 0.0917518564497675 0.0971952413946422 0.0920312564889322 0.0934454619349435 0.0917921817661056 0.100160240580266 0.0919218490229157 0.0970082399609332 5 5|0 -|/ 25069622 25070562 25070042.3 25069204 25071515 - gene protein_coding_gene TRUE TRUE AT5G62390.1 ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7); calmodulin binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to calmodulin-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67696.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.604330876617711 7.15555106258204 2.28570456169402e-05 0.000552406523609551 11.1445396032463 19.4027715684322 0.604330876617711 0.0470776271822922 AT5G55140_at 5.68778068031504 6.34052839589197 7.03290424231502 6.98129848337794 7.08143463777707 7.2199182167544 6.18931900445281 6.69818764283217 5.31585053795686 5.55429962017133 6.62864144058199 6.1058441624499 6.4544184926208 6.66885704005762 6.6954465636564 6.59881312759524 6.87066014655197 5.61133573513842 5.91115653718142 0.215974230083618 0.202453446360480 0.196259109261260 0.205123535066631 0.193237764996293 0.195240725173663 0.193237764996293 0.199617649132765 0.201296625816233 0.197574924309452 0.200415036985108 0.201511886130481 0.195089623402349 0.194594017683975 0.205457154568847 0.196126210068567 0.204144269000035 0.19878289620664 0.197772450069627 5 5 + 22398598 22398987 22398774.455 22398222 22399254 + gene protein_coding_gene TRUE TRUE AT5G55140.1 ribosomal protein L30 family protein similar to ribosomal protein L30p-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61538.1); similar to Os06g0339800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057562.1); similar to Os08g0110100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060816.1); contains InterPro domain Ribosomal protein L30; (InterPro:IPR000517); contains InterPro domain Ribosomal protein L30, bacterial; (InterPro:IPR005996) 0.855209077164059 7.15215852745072 2.29538136688555e-05 0.000554436152819522 11.1404230271843 12.6779319064736 0.855209077164059 0.145496445977556 AT5G17010_at 6.06055717833055 6.4434052464942 7.08535334777847 6.91069343304407 7.19701628250838 7.3462940627523 7.32301986547647 7.33884518003495 5.21301050238193 5.56100678396934 5.91642938621943 5.8566317772891 6.80676874110858 5.9187613480919 6.06654158099205 6.52196945560522 7.39109137390538 6.27183550323327 5.31872104401202 0.197393698234856 0.201156110619583 0.192547309880176 0.193577745791195 0.207096397974842 0.190843669543171 0.199612026928248 0.196362393849995 0.222797816184771 0.196411906700922 0.194036582740137 0.197610017997002 0.195279907308655 0.211332807380953 0.197505003132995 0.190843669543171 0.207428335842859 0.192714735533407 0.194061954798551 5 5|0 -|/ 5587902 5589572 5588766.9 5587354 5592449 - gene protein_coding_gene TRUE TRUE AT5G17010.1|AT5G17010.2|AT5G17010.3 sugar transporter family protein Identical to D-xylose-proton symporter-like 2 [Arabidopsis Thaliana] (GB:Q6AWX0;GB:Q9LFK1); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT3G03090.1); similar to Os10g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065505.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91902.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828)|similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT3G03090.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91902.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.661444974810641 7.15130842167604 2.29781310180575e-05 0.000554714491245292 11.1393912408256 12.8171479525158 0.661444974810641 0.0773174899312881 AT5G45380_at 9.14771323794355 9.57544272737526 10.6344411907287 10.5739197119436 10.3378742020703 10.0146630044831 6.76778190769433 7.06290851575198 7.8891493730273 6.33807205928622 5.07658928207043 5.06999098835636 7.11123577825995 7.21991315832954 4.76353812225014 7.06440990262956 7.36985777807621 6.96218143029956 7.10642896048915 0.254593863986746 0.250235033504819 0.253514613693372 0.249728943294264 0.252243717865793 0.253801192072665 0.245777074627307 0.24496403005792 0.267710159675655 0.247846926061647 0.258468987196256 0.249261418164883 0.249935960658158 0.24496403005792 0.264523836669269 0.24496403005792 0.265880262877955 0.247912176573466 0.24496403005792 5 5|0 +|/ 18411964 18412838 18412383.375 18408351 18413121 + gene protein_coding_gene TRUE TRUE AT5G45380.1 sodium:solute symporter family protein similar to Os10g0580400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065513.1); similar to Urea transporter (ISS) [Ostreococcus tauri] (GB:CAL57595.1); contains InterPro domain Na+/solute symporter; (InterPro:IPR001734) 0.735130343774116 7.14811476277031 2.30697341678735e-05 0.000556615960814015 11.1355141546865 15.9848087385663 0.735130343774116 0.106422365377324 AT5G55710_at 8.11372467250287 8.597844904481 8.87787275192796 8.91425496116985 9.4579957231314 8.89977775580764 8.69777574016341 8.83573655249993 8.57072023523414 7.797109477711 9.20812670216038 9.34321658812832 8.8719898201781 9.2188728614182 9.16092952022757 9.28604533781885 8.78738645040633 9.32763237705038 7.67945420883575 0.156078988103564 0.150908343633407 0.16018025280978 0.152640160870080 0.156831553619119 0.157443414812589 0.161252382626157 0.154027696799557 0.169174829133556 0.177444397883986 0.154092271895956 0.16043523311616 0.155611654477349 0.170039393595040 0.16171980790996 0.157699893044583 0.161071927048275 0.165181214823578 0.158338853931677 5 5 - 22572282 22572737 22572523 22572104 22572876 - gene protein_coding_gene TRUE TRUE AT5G55710.1 similar to tic20 protein-related [Arabidopsis thaliana] (TAIR:AT2G47840.1); similar to Os02g0726600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047992.1); similar to hypothetical protein Tery_3886 [Trichodesmium erythraeum IMS101] (GB:YP_723396.1) 0.805484240255318 7.14560221923212 2.31420774816111e-05 0.000558050881250505 11.1324629470103 17.3825160149274 0.805484240255318 0.130232867483781 AT5G67560_at 8.5802444483046 8.78553687231904 9.32411076590522 9.39188653489321 10.2767263318746 9.31091038932936 9.06588893252455 9.02215647757603 8.82218009039562 8.58689774885069 10.1068212540848 9.83667308704706 9.84560705329342 9.97305844206525 9.53348985574714 9.616895741517 9.13928088217484 9.73089353618671 8.24083471441856 0.161029404533804 0.154631754112533 0.161011676953737 0.155653359169780 0.160544563627911 0.167229895742407 0.164322591842334 0.160808553820482 0.183125574951497 0.162633885380366 0.157525866968053 0.158462682098492 0.153131621172946 0.163833481052372 0.159660019777229 0.158625380841123 0.179707069724519 0.164550762388462 0.163031615352895 5 5|0 +|/ 26967811 26969049 26968664.875 26967535 26969424 + gene protein_coding_gene TRUE TRUE AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. similar to ATARLA1C (ADP-ribosylation factor-like A1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G49870.1); similar to protein tyrosine phosphatase, non-receptor type 7 [Gallus gallus] (GB:NP_001012886.1); similar to Os03g0200800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049292.1); similar to ADP-ribosylation factor-like 10B [Xenopus tropicalis] (GB:NP_988990.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.942660476556227 7.14494598671189 2.31610125146179e-05 0.00055819702853811 11.1316658808729 18.3560880104589 0.942660476556227 0.171442199110506 AT5G08750_at 5.81022685786121 6.6428231910694 7.91264962228493 7.9447574492688 8.5354907825501 7.94428257256557 7.59859239151874 7.66976581412921 7.11395287448892 7.53100679004951 8.34326055029202 7.98008985890623 8.38159240298288 8.11883218969191 7.34146957551514 8.2892407712264 7.59392917911348 8.32733637856524 7.18068232725541 0.218385765790237 0.202597518981926 0.218131338365208 0.199583454443347 0.197172156807069 0.213613034183591 0.198182347558135 0.193956413268740 0.220749822786935 0.199431401626094 0.193956413268740 0.195256446054902 0.193956413268740 0.207017495279953 0.20769264961643 0.193956413268740 0.236334677741960 0.206723934920497 0.203357979319856 5 5|0 +|/ 2853653 2854295 2853922.5 2851980 2854514 + gene protein_coding_gene TRUE TRUE AT5G08750.1|AT5G08750.2|AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G63780.1); similar to zinc finger protein [Brassica rapa] (GB:ABK56014.1); similar to OSJNBb0020J19.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE05784.2); similar to Os04g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054367.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.96284895452238 7.14309986898674 2.32143702467044e-05 0.000559172164303767 11.1294232492312 15.1684150154316 0.96284895452238 0.177230313449249 AT5G01740_at 1.95262937585457 2.15954503769244 2.21849913871636 2.28251059146101 1.66039349090766 1.83400894451499 2.2886420877321 1.95562848067404 2.56958007381857 2.07092189360794 3.96124620165114 3.66102920062514 4.44401900434624 3.72275634905739 3.15116666261583 4.72560499306653 3.03123534575746 4.3572817316254 2.80140940002749 0.244265222549171 0.250289346946959 0.237428237853407 0.237428237853407 0.237428237853407 0.243367775398238 0.247802877852636 0.241138392580903 0.240884248912215 0.237428237853407 0.241755075761723 0.246230333645069 0.245591028224988 0.242736108191743 0.249394022748923 0.250664674967011 0.243405183151191 0.253200529346473 0.237794803535503 5 5 + 280878 281247 281054.273 280719 281442 + gene protein_coding_gene TRUE TRUE AT5G01740.1 similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G10985.1); similar to Wound-induced protein WI12, putative [Medicago truncatula] (GB:ABE88200.1); contains InterPro domain Wound-induced WI12; (InterPro:IPR009798) 0.655448554760095 7.14179837961538 2.32520663383666e-05 0.000559706412635832 11.1278419389577 5.22519692273305 0.655448554760095 0.0750251237824891 AT5G10930_at 6.5650846794355 7.18917167210971 8.76508889186204 9.16527446831674 9.2722133826234 9.07358469105984 9.10892235133503 9.17880250194194 7.58388490431551 8.00882807995825 8.09634727397975 7.94984676461433 9.05344327836533 8.65454465062827 7.42919993736857 9.04364480001548 9.35280220487304 7.94171060021576 8.01430866539507 0.191206004705735 0.182280260489085 0.19699253283148 0.197326752976777 0.188504570013752 0.192239524841251 0.190474731216797 0.190231074693620 0.196931010919274 0.188870242841271 0.186772422494932 0.184412355922940 0.190896390144273 0.1855370214728 0.198945602993170 0.182429052312700 0.198717940108152 0.195889680450909 0.188932581687585 5 5 - 3445601 3446129 3445893.364 3445367 3447115 - gene protein_coding_gene TRUE TRUE AT5G10930.1 CIPK5 (CBL-INTERACTING PROTEIN KINASE 5); kinase Encodes CBL-interacting protein kinase 5 (CIPK5). similar to CIPK25 (CBL-INTERACTING PROTEIN KINASE 25), kinase [Arabidopsis thaliana] (TAIR:AT5G25110.1); similar to CBL-interacting protein kinase 6 [Populus trichocarpa] (GB:ABJ91234.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.814865139730623 7.1414430918889 2.32623682777626e-05 0.000559706412635832 11.1274102234178 16.6943676574924 0.814865139730623 0.133372238332164 AT5G57330_at 9.54611843928216 9.5675055676757 10.0914636110933 10.1278608286326 10.0352351148051 9.74313983075597 9.86402906175445 9.78938788886414 8.59200726024454 9.21858848315317 9.85262129511255 10.0846665661049 9.8039758377931 9.73549111394349 9.9766480017426 9.65862855270784 9.93395013577105 9.94401494017088 9.06209732651773 0.101999011235648 0.0983252433708506 0.107414468547745 0.104337881947974 0.102806493076492 0.103458487166790 0.101009021947795 0.0991666002479414 0.127691976639502 0.104385893902080 0.102229066908184 0.099378913525852 0.102662410973504 0.101585664037069 0.103821731657937 0.101382516823449 0.104204621226296 0.106285780492215 0.105795870981343 5 5|0 +|/ 23237105 23237848 23237487.111 23235440 23238315 + gene protein_coding_gene TRUE TRUE AT5G57330.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to Os04g0658000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054126.1); similar to OSIGBa0132E09-OSIGBa0108L24.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67787.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE86317.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) 0.611924902853724 7.14045280845882 2.32911085411544e-05 0.000560087106307642 11.1262068226172 19.2612494988863 0.611924902853724 0.0526817526802211 AT5G67080_at 1.08795381901353 1.24339006666366 3.07996140999038 3.0872313227392 1.02429813088219 1.11756131758917 0.759729477052745 0.81203308285768 1.25610046306277 0.664674221206377 0.78660069881477 0.873364319006857 1.00982320055763 0.928114067397525 0.672211245275491 1.16342490071884 1.23812781254412 1.10989290663706 0.797782370781069 0.203451079550837 0.203526309026599 0.210120962646089 0.208711273044669 0.204157403615967 0.206074639619034 0.201215761813943 0.201215761813943 0.209373179140408 0.211727121349141 0.204907921129667 0.201684980140618 0.203367170829009 0.204959821397261 0.202113665520326 0.205580258206116 0.207114254327784 0.203183427078228 0.205917766192326 5 5 + 26790463 26790961 26790719.091 26789952 26790986 + gene protein_coding_gene TRUE TRUE AT5G67080.1 MAPKKK19 (Mitogen-activated protein kinase kinase kinase 19); kinase member of MEKK subfamily similar to MAPKKK20 (Mitogen-activated protein kinase kinase kinase 20), kinase [Arabidopsis thaliana] (TAIR:AT3G50310.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93553.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.583997821377814 7.13542512189848 2.34376146129308e-05 0.000563297751928418 11.1200950393616 2.46596011779146 0.583997821377814 0.0326734207542634 AT5G46250_at 10.5366987748156 10.5330489858814 11.2822712202601 11.1718119105224 11.2284700770224 11.1944636350049 10.3690105860972 10.3357995634543 10.8149203612943 10.7631280851467 11.166853748998 11.0113814834787 11.1505465045073 11.1014470814048 10.9202378722293 11.0394700679449 11.2015610007082 11.3310656412488 10.6560515366434 0.0646155116877752 0.0620227236876931 0.0623910852348981 0.0643898838091406 0.0614484045825198 0.06297646682085 0.0599091471060853 0.0607766489990741 0.062058129097478 0.0615142301150929 0.059839089294398 0.0596058601610854 0.0606356769811689 0.0618659517847967 0.0613465663179964 0.0601524696771709 0.0637149909114701 0.0601841512757186 0.0628015858667233 5 0|5 /|+ 18774510 18775251 18775024.625 18772538 18775508 + gene protein_coding_gene TRUE TRUE AT5G46250.1|AT5G46250.2|AT5G46250.3 RNA recognition motif (RRM)-containing protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43970.1); similar to putative RNA-binding protein homolog [Oryza sativa (japonica cultivar-group)] (GB:BAD87502.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Lupus La protein; (InterPro:IPR002344); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.573117581921927 7.1312471626691 2.35601149939837e-05 0.000565928208839823 11.115013540856 21.7614570538455 0.573117581921927 0.0208198427483072 AT5G66240_at 8.44697682036359 8.31827040626814 9.30058337701348 9.28013012929343 9.54573563378951 9.27406695735885 8.01071715358492 8.47604840823607 8.71790776395314 8.64701286885762 9.01782138974194 9.11844151536738 9.05205325961145 8.92878863260097 8.8276153463318 9.36240791509444 9.10688866299236 9.35045124509989 8.80342130657208 0.134020037888122 0.133183299490132 0.136205181038432 0.138264134413147 0.139221588508519 0.143404897092384 0.143641160590243 0.135704520309393 0.146495587559747 0.147767067126043 0.138545782974668 0.141697007508964 0.135756664362182 0.139750262199429 0.142168047925661 0.133414348965456 0.147900536886355 0.134906871449241 0.141064106626337 5 5|0 +|/ 26484328 26485399 26484945.556 26483430 26485674 + gene protein_coding_gene TRUE TRUE AT5G66240.1|AT5G66240.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G14530.1); similar to hypothetical protein DDBDRAFT_0218126 [Dictyostelium discoideum AX4] (GB:XP_641992.1); similar to Os07g0589400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060150.1); similar to Os05g0543300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056203.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.704951838322361 7.13042754151667 2.35842276204005e-05 0.00056619372797142 11.1140163817611 17.7407356818965 0.704951838322361 0.0959354751526915 AT5G63150_at 4.2057021553948 5.11274023510721 5.50998380901612 5.79844606597366 6.79062282235653 5.51195186001538 5.15826870225756 5.2736786306124 4.48769549793745 4.69418681107666 6.501453536256 6.97334950445932 6.06161530993309 6.30151695599153 6.18292917354941 6.80903020139433 4.97590520568961 6.06225578236025 4.38661547419163 0.250068599454596 0.240163885632025 0.245412077964173 0.246998389629782 0.242060435864461 0.24417925779916 0.241488760098258 0.240714922932088 0.249502726962467 0.239001830518897 0.242534182888026 0.239132605055789 0.24382654727085 0.242734652497337 0.251410059297407 0.239680617302647 0.261394800083016 0.254430419981635 0.245908047137469 5 5 + 25347489 25347862 25347638.727 25347426 25348070 + gene protein_coding_gene TRUE TRUE AT5G63150.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90666.1); contains InterPro domain Protein of unknown function DUF1713, mitochondria; (InterPro:IPR013177) 1.33791403639985 7.12978608557633 2.36031173050296e-05 0.00056623332207604 11.1132359152174 10.7983440616448 1.33791403639985 0.276576190726101 AT5G03770_at 2.43655386399906 2.61926107922374 3.101994128876 3.2078620036857 3.82005948657910 3.63487430011851 2.27086092558843 2.40342746909513 2.81478942345358 2.76797506317132 2.97469019890776 2.93190375309618 3.22567936790356 2.65506666283186 2.65319506764545 3.2489110715561 3.26887356109408 3.09891539845878 2.78812657174212 0.230137287357986 0.225185465911362 0.226481227704855 0.227543921469769 0.223398002069843 0.23245630757235 0.223398002069843 0.225666872827678 0.223398002069843 0.230664077184345 0.225535753807637 0.233488435761296 0.232244132011545 0.235161431102185 0.224852415898865 0.223398002069843 0.244721106006645 0.227348852730054 0.223398002069843 5 5|0 +|/ 996787 997561 997172.8 995159 997847 + gene protein_coding_gene TRUE TRUE AT5G03770.1 3-deoxy-D-manno-octulosonic acid transferase-related similar to Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] (GB:ABE80128.1); contains InterPro domain Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; (InterPro:IPR007507) 0.612764505534644 7.12948476238553 2.36119963377955e-05 0.00056623332207604 11.1128692722564 5.83558735946691 0.612764505534644 0.0537466039204949 AT5G24490_at 12.5106031456418 12.3150137480395 12.3210899464830 12.1289684826885 12.8604156853555 12.6695389291958 11.0188789132003 10.8806119123556 11.8869551332125 11.9610266327139 12.5603306337655 12.4377905512244 12.1838736165483 12.4189613525479 12.6030405417479 12.2919819040517 12.2092920171180 12.3802549235503 11.9799329167047 0.0555014318177797 0.0535662719649317 0.0541178035473115 0.0539423864158872 0.0538113906252807 0.053124070980992 0.0583647350338062 0.0556049538739086 0.0620851786591641 0.0549927908720165 0.0529580277421281 0.0526761182803359 0.0526761182803359 0.0526761182803359 0.0551725719541243 0.0526761182803359 0.0540796085029379 0.0563516287540518 0.0540711123112153 5 5 + 8366311 8367157 8366810.636 8365604 8367463 + gene protein_coding_gene TRUE TRUE AT5G24490.1 30S ribosomal protein, putative similar to chloroplast-specific ribosomal protein [Lycopersicon esculentum] (GB:AAU03364.1); contains InterPro domain Rudiment single hybrid motif; (InterPro:IPR011054); contains InterPro domain Sigma 54 modulation protein/ribosomal protein S30EA; (InterPro:IPR003489) 0.628389398073482 7.12657256053018 2.36979952819487e-05 0.000567981491985483 11.1093251246075 24.2523045554265 0.628389398073482 0.0625677141933195 AT5G17510_at 3.17805235163075 3.74991634904106 4.40093635404384 3.88683667999363 4.76404636075791 4.90572303732879 3.70586288208093 4.05183270447185 3.18471040306692 2.93043607768890 3.57894909060983 4.10316770500539 3.96567573937968 3.96437292864963 3.91355441123093 4.00148721408697 4.06781702289166 3.26144357599562 2.75079855407981 0.216920893830042 0.21956004787458 0.226169186566475 0.239747097571714 0.239347174947837 0.226531381895396 0.216074235797755 0.213370766062971 0.218318879446801 0.222236212924427 0.21623933157294 0.212343366519240 0.216558995017335 0.219886678290712 0.228144854883681 0.215617760788932 0.221655264989642 0.229606983295581 0.228038559846863 5 5 - 5770666 5771077 5770867.182 5769975 5772397 - gene protein_coding_gene TRUE TRUE AT5G17510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03460.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22017.1) 0.859856492797116 7.12302742734107 2.38031406406944e-05 0.000570186368206371 11.1050091119668 7.48658757621514 0.859856492797116 0.147968751174261 AT5G60160_at 8.78959229892993 8.8346552239303 9.76357625400609 9.83056131965276 9.53883960784372 9.33401195274758 8.54909738526039 8.99834279884897 8.15462971833446 8.49582577216353 8.81917447170272 8.7390952886773 8.96885808345948 8.84406636233302 8.57952736513016 9.12690062361275 8.92092862995552 8.80393004429438 8.28913308021255 0.172336270431999 0.164218098738446 0.173674888630854 0.170188803847463 0.16554461487413 0.181928359642383 0.162706010553666 0.160999507698436 0.201033089531669 0.167325526925585 0.174915170344533 0.170129135433130 0.172760576426727 0.179923323799715 0.168267891479300 0.160999507698436 0.185515158902450 0.171713100183239 0.169827448560979 5 5 - 24241117 24241891 24241451.091 24240942 24244109 - gene protein_coding_gene TRUE TRUE AT5G60160.1 aspartyl aminopeptidase, putative similar to aspartyl aminopeptidase, putative [Arabidopsis thaliana] (TAIR:AT5G04710.1); similar to Peptidase M18, aminopeptidase I [Medicago truncatula] (GB:ABE80427.1); similar to Os01g0967900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045513.1); similar to Os12g0236500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066463.1); contains InterPro domain Peptidase M18, aminopeptidase I; (InterPro:IPR001948) 0.68046963761448 7.12203391455191 2.38326973706043e-05 0.00057054415816333 11.1037992496775 17.7865877545937 0.68046963761448 0.086578104426035 AT5G50330_at 2.69449059191486 2.85835485145267 3.38588452774957 3.06608187552947 4.47478600119674 3.40376264491014 2.17598177060299 1.62714166494024 2.79361255728035 2.52919478003248 4.01361058906911 4.14867420037899 3.07759241401524 3.79019006183552 4.09398578330336 3.7146898314989 2.85514312256869 3.56064967129764 2.73794607436797 0.239036334397296 0.239036334397296 0.242580884052477 0.241753832842303 0.239036334397296 0.253246768553397 0.247995310911550 0.247661184295357 0.253690193544257 0.242723117505672 0.239036334397296 0.239036334397296 0.243476089472497 0.24384705731622 0.239036334397296 0.241047883803375 0.249852346222961 0.265663667735261 0.246986187578672 5 5|0 -|/ 20502798 20504225 20503328.222 20502449 20505910 - gene protein_coding_gene TRUE TRUE AT5G50330.1 ATP binding / protein kinase similar to ATP binding / electron carrier/ heme binding / iron ion binding / protein kinase [Arabidopsis thaliana] (TAIR:AT4G24810.2); similar to Os01g0904200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045121.1); similar to ABC transporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB90550.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain ABC-1; (InterPro:IPR004147) 1.10676784898556 7.12133272401141 2.38535813886421e-05 0.00057054415816333 11.1029452838955 6.13267787260685 1.10676784898556 0.217350162809696 AT5G22270_at 10.8036653920174 10.9870506796843 11.7902930985835 11.8218752546877 11.7755267642052 11.6886070771575 11.0609941076420 11.0993757801042 11.7587201748262 11.9155302001248 12.4321760185836 12.2901426148941 12.3035062243658 12.2033992467575 12.0830933325677 12.1261417605283 12.5322631767136 12.4774400700256 12.0671334087629 0.0577569914569732 0.0559835226450961 0.0581525378762138 0.0553952599488653 0.0556699075697089 0.0562650993429397 0.0544829027659186 0.0562423756009155 0.06230263998935 0.0554111412747448 0.0551506967734312 0.054421240529635 0.0549050613063385 0.0568288368112263 0.0580665677912699 0.0547534483617439 0.0559363223828947 0.054421240529635 0.0558807527969796 5 5 - 7372521 7372738 7372623.818 7372236 7373105 - gene protein_coding_gene TRUE TRUE AT5G22270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11600.1); similar to H0913C04.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86164.1); similar to Os04g0415000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052757.1); similar to Os02g0536500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047044.1) 0.586764884889878 7.12119939969096 2.3857554504147e-05 0.00057054415816333 11.1027829031793 23.4883309693231 0.586764884889878 0.0361579824413816 AT5G09380_at 4.03135695418541 3.67145402705262 5.40292735298506 4.48508534765271 5.31187014662855 4.84710733283639 3.98083266948551 3.87334023039895 3.72289640449672 3.93442934214597 4.7185053845004 4.96491416385093 5.31992741366364 4.75754581721502 4.75413189562941 4.70982363930374 4.58968722334734 4.51746582778574 4.06365630097422 0.227982635180654 0.218559074484496 0.223837633841807 0.223475083477198 0.226597898056658 0.231691183010275 0.224653401546692 0.218559074484496 0.224075081901114 0.218642283970178 0.220993765584339 0.220716244206428 0.227056506212939 0.223622681399055 0.221571149558163 0.218559074484496 0.226194963921755 0.227054367985052 0.225649855593278 5 5|0 -|/ 2911350 2912333 2911905.3 2911314 2913137 - gene protein_coding_gene TRUE TRUE AT5G09380.1 DNA-directed RNA polymerase III RPC4 family protein similar to DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT4G25180.1); similar to H0718E12.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66462.1); contains InterPro domain RNA polymerase III RPC4; (InterPro:IPR007811) 1.00350386476739 7.11804081583809 2.39518902851729e-05 0.000572484395408465 11.0989352230771 8.79974385092031 1.00350386476739 0.18953421768386 AT5G01820_at 9.3097159706283 9.60055180262478 10.7595632094902 11.0091275567912 10.6829499722342 10.7336539023699 10.1581578801230 10.3945631573027 9.55013477733336 10.0014917695402 9.9010851691136 9.6754331471222 10.5499564448270 10.0830012687718 9.30665018498328 10.5069081334794 10.9328130974253 10.0687319149123 9.66134204015534 0.0974441414793399 0.0944824604850746 0.0924954226399683 0.0950721434808049 0.094719863711893 0.0971474583422992 0.0946707104518027 0.0935592263232638 0.103168880029999 0.098357972321291 0.0909807042411075 0.0922732500300365 0.0922207694028005 0.0946503610040165 0.100242903957565 0.093240374129307 0.0906232353685403 0.0913076329812617 0.0965340194224414 5 5 - 313446 313972 313671.818 313190 314997 - gene protein_coding_gene TRUE TRUE AT5G01820.1 ATSR1 (SERINE/THREONINE PROTEIN KINASE 1); kinase Encodes a CBL-interacting serine/threonine protein kinase. similar to CIPK11 (SNF1-RELATED PROTEIN KINASE 3.22, SOS3-INTERACTING PROTEIN 4), kinase [Arabidopsis thaliana] (TAIR:AT2G30360.1); similar to CBL-interacting protein kinase 21 [Populus trichocarpa] (GB:ABJ91227.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.660496340977349 7.11420833323665 2.40668928776101e-05 0.000574916188810646 11.0942647620130 20.2638997393234 0.660496340977349 0.0784161435833874 AT5G42390_at 9.06298249511542 8.81273454341149 9.77398135621238 9.69739558808108 9.65501174837693 9.42883689626866 9.5159772901147 9.17065837170357 9.28766667469593 9.42449813152204 10.2648984586522 10.0710855497091 10.1028359973830 10.0661503708151 10.1626371815802 10.4278509383425 10.3173942065349 10.0901869341194 9.30468808576731 0.0871485196776112 0.0939491459023606 0.0896909466075962 0.0934397984756605 0.0875989830699443 0.0923243078366261 0.087862195289899 0.0937137871097823 0.0976261779697746 0.0922794040654493 0.087076820233578 0.0883130346358747 0.088199016642234 0.0898542064070839 0.0922026056422438 0.087076820233578 0.092349153433293 0.0964538261450255 0.0946652966558192 5 5|0 +|/ 16968648 16969844 16969439.4 16962479 16970328 + gene protein_coding_gene TRUE TRUE AT5G42390.1 metalloendopeptidase similar to peptidase M16 family protein / insulinase family protein [Arabidopsis thaliana] (TAIR:AT5G56730.1); similar to metalloendopeptidase (GB:AAA81472.1); similar to putative metalloendopeptidase [Oryza sativa (japonica cultivar-group)] (GB:BAD35692.1); similar to Peptidase M16A, coenzyme PQQ biosynthesis protein PqqF [Medicago truncatula] (GB:ABE94713.1); contains InterPro domain Peptidase M16, C-terminal; (InterPro:IPR007863); contains InterPro domain Peptidase M16, N-terminal; (InterPro:IPR011765) 0.673573606397716 7.10024650597628 2.44909063136302e-05 0.000584722970498134 11.0772328965790 19.1531127454791 0.673573606397716 0.08458278147456 AT5G27470_at 9.1896169305057 9.17429946270417 9.71955725845167 9.78500447703615 9.98829575452642 9.77008923440953 9.36410170294672 9.21598925749877 8.8516466752748 8.873068732796 9.72658488885881 9.67870210403276 9.43646769608612 9.33876277124361 9.77712367057681 9.41282961668592 9.21440841001203 9.31194434769528 8.88465819704508 0.111219020936343 0.110960822919638 0.110747309135288 0.108398441309861 0.114044656986476 0.110160085155235 0.115255484405710 0.117511966859737 0.121187426725203 0.120246173578232 0.114330114814729 0.114025367033287 0.108120477242300 0.116934657587056 0.116786326054055 0.113197144124056 0.129280071646795 0.118954580381852 0.115616362975343 5 5 + 9696500 9697106 9696855.636 9695011 9697392 + gene protein_coding_gene TRUE TRUE AT5G27470.1 seryl-tRNA synthetase / serine--tRNA ligase Identical to Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) [Arabidopsis Thaliana] (GB:Q39230); similar to AtSRS (OVULE ABORTION 7), serine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G11870.1); similar to Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) (GB:O81983); similar to Os03g0198400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049278.1); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain Seryl-tRNA synthetase, class IIa; (InterPro:IPR002317) 0.598523289567865 7.08642613167807 2.49185577319017e-05 0.000594605767116655 11.0603468799030 18.704316329687 0.598523289567865 0.0470980103227104 AT5G27970_at 6.35817954320942 6.23522888684223 7.0162589321273 6.66568216718682 7.04402801428382 6.39532122736545 6.13906777139562 5.69092563624383 5.882870885183 5.94611929167661 6.8401857236001 7.19240406676597 7.0061795702779 6.96573678741988 7.07982412221356 6.91097259286588 6.61308733054842 6.5023382140835 5.67218039274754 0.201913210992973 0.200721283853699 0.201893747608419 0.196236827571448 0.209810304922488 0.210096891916601 0.205901632862247 0.20683108936414 0.212816630999976 0.202503173730087 0.196878684484686 0.196236827571448 0.202269887749419 0.208461114374243 0.201724869953738 0.197973376103703 0.20134961197916 0.208941320724009 0.204005885149054 5 5|0 +|/ 10014266 10015201 10014799.889 10004724 10015672 + gene protein_coding_gene TRUE TRUE AT5G27970.1 binding similar to ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7), guanyl-nucleotide exchange factor/ protein binding [Arabidopsis thaliana] (TAIR:AT3G43300.1); similar to Os01g0772700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044394.1); similar to SF21-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82073.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.864794826793798 7.08570443018486 2.49411095812680e-05 0.000594816536689791 11.0594643594673 12.8043688094190 0.864794826793798 0.150833079029717 AT5G16950_at 5.51386657635755 5.06231663069258 5.9568240059247 5.89977400070364 5.75966600817004 5.89728837014168 4.27735001323826 4.72882260688819 5.14212361962501 4.3651096401918 4.79621273632935 5.15344739170647 5.034925111173 5.54015500171527 5.49169476384436 5.02244919145542 5.57682132602831 4.90011344994389 4.52269311701551 0.218901491962190 0.217044858452775 0.214462677455755 0.221163016912827 0.217209300507902 0.219977253416409 0.227577260067209 0.233706869061235 0.213448814165693 0.215882285130257 0.216388088197828 0.214625622951657 0.215667380904679 0.216815133497683 0.217853784524993 0.213448814165693 0.213457235593168 0.215167949694019 0.220550352241741 5 5 + 5572650 5572913 5572791.182 5572579 5573073 + gene protein_coding_gene TRUE TRUE AT5G16950.1 similar to hypothetical protein MtrDRAFT_AC157349g25v1 [Medicago truncatula] (GB:ABE78359.1) 0.747817192677302 7.07811380636372 2.51796384857944e-05 0.000600175045127983 11.0501778971632 10.3200482750822 0.747817192677302 0.113468905769196 AT5G53560_at 10.9368681465186 10.9951884604738 11.7348740137889 11.6595630336060 11.8714715775443 11.4969810784338 11.2784369787278 11.2392365373261 11.0111434896788 10.9487560527892 11.8566295465650 11.7824154169015 11.668698960915 11.6395831501714 11.9035124956166 11.5667673058435 11.1959374595963 11.9041747947207 11.0487229414145 0.0788176247326818 0.0783995536361164 0.0766234827248457 0.0764378392290695 0.0762261617199644 0.084265313676236 0.0752758354536412 0.0754146061542556 0.079373968841702 0.0738306357440398 0.0727447307006059 0.0727700148752263 0.0731001004119323 0.0748937114350535 0.0755745614801924 0.0736706463488286 0.0875102210000556 0.0792643123018179 0.0733447208870416 5 5 + 21776918 21777549 21777355.545 21776593 21777804 + gene protein_coding_gene TRUE TRUE AT5G53560.1 ATB5-A (Cytochrome b5 A) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. Identical to Cytochrome b5 isoform 1 [Arabidopsis Thaliana] (GB:Q42342;GB:Q9SB05); similar to B5 #4 (cytochrome b5 family protein #4), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G32720.1); similar to Cytochrome b5 (GB:P40934); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.632565312539398 7.07101886510471 2.54048133074164e-05 0.000605209535683574 11.0414905946819 22.7478720045951 0.632565312539398 0.0672140418463827 AT5G62180_at 1.73431722996208 2.1064014441819 3.08798935294407 3.23144295636486 2.40692958549552 2.33849174259135 1.94062677463221 2.17494804767126 2.60269332218522 2.12359519966644 2.93324583877118 2.92160910509767 2.80452130823264 2.76800938381731 3.02627155069177 2.8278185655908 2.68772222556420 2.86851009852803 2.19756986164519 0.202468651157995 0.189869194734028 0.202740339565928 0.207360407115847 0.195264127611108 0.202347189166569 0.193530501012243 0.197216866735890 0.202404333344815 0.199666536160334 0.189869194734028 0.193368811482326 0.195051208179589 0.199569570667736 0.198303528026357 0.191492181979055 0.208026547625316 0.190572117704325 0.193994318967177 5 5 - 24996170 24996666 24996457.182 24996070 24997075 - gene protein_coding_gene TRUE TRUE AT5G62180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45600.1); similar to CXE carboxylesterase [Actinidia arguta] (GB:ABB89014.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.661950375137419 7.06844529563852 2.54870267889717e-05 0.000606834651623111 11.0383376873796 4.95897654374823 0.661950375137419 0.0809140756914254 AT5G17290_at 7.58494414057709 7.72156109491128 8.7509011860083 8.63996705019566 8.96882011060637 8.57492857571553 7.48921536425667 7.70130639022191 6.98255567206473 7.48827913000127 7.72445870570373 7.36783485967413 7.49145110649494 7.7685165194558 7.16546881404739 8.070369343005 7.8541441257559 7.7087750013263 7.78615469831352 0.197922670191644 0.195106029473485 0.201562357959558 0.193708254916910 0.203051420430797 0.210721702690073 0.203185871140529 0.203857068805549 0.232436294147630 0.207198157864339 0.201445600437308 0.200822097280858 0.200231199875754 0.199811373436589 0.195146497933579 0.191837105832052 0.206397798514321 0.203341779825714 0.196828597398031 5 5|0 -|/ 5687176 5688350 5687594.9 5686947 5689902 - gene protein_coding_gene TRUE TRUE AT5G17290.1 APG5/ATG5 (AUTOPHAGY 5); transporter Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. Identical to Autophagy protein 5 (ATG5) [Arabidopsis Thaliana] (GB:Q9FFI2); similar to Autophagy protein Apg5 [Medicago truncatula] (GB:ABE83278.1); contains InterPro domain Autophagy protein Apg5; (InterPro:IPR007239) 0.667139146223057 7.0671152307657 2.55296283834326e-05 0.000607515360095416 11.0367078484244 15.7103923938413 0.667139146223057 0.0831929980561254 AT5G38460_at 2.42907188208305 2.96645987959466 3.23224289645127 3.36645988129259 3.90482346103766 3.7247409032061 3.22355252185249 3.23256548803605 2.76934161077203 2.46606911082807 3.62321295319594 3.79838312541911 3.50144396065992 3.15902980746842 3.67569096809169 3.70069225120476 3.48773571739242 3.29031005672695 2.86716862030498 0.239371914960015 0.239371914960015 0.251700987304648 0.267866755254101 0.245627173640281 0.250382155002781 0.246965659269966 0.245201981534147 0.251752908852715 0.246003155494697 0.240741305342413 0.243706127135977 0.239886041882932 0.248929418092352 0.239371914960015 0.239371914960015 0.252061479488333 0.241688539520777 0.244701741046287 5 5 - 15415845 15416462 15416176.182 15415514 15418256 - gene protein_coding_gene TRUE TRUE AT5G38460.1 ALG6, ALG8 glycosyltransferase family protein Identical to Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3- glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP- dolichyl glucosyltransferase) [Arabidopsis Thaliana] (GB:Q9FF17); similar to ALG6, ALG8 glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT2G44660.1); similar to putative alpha 3 glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAC79743.1); contains InterPro domain ALG6, ALG8 glycosyltransferase; (InterPro:IPR004856) 0.711428458495108 7.0662118038702 2.55586086135025e-05 0.000607871359011499 11.0356006635754 6.3752006820217 0.711428458495108 0.100805050238358 AT5G27820_at 4.99129035361907 5.12877229654613 4.86326709903948 4.72858653174351 4.73148009833328 5.20365022301758 4.45039118233264 4.55222466766997 3.91237486820516 4.64142380273365 5.87287812295472 6.43483923861592 5.18202652859184 5.48734120940243 6.39384692165191 5.71706593849978 5.49571929888353 5.02844279360726 4.75625855351623 0.214035385125247 0.213381313038499 0.209533283011403 0.218442570660903 0.209533283011403 0.213718264964808 0.209811793116050 0.217929593831353 0.230798882713494 0.215053507370222 0.217059857307387 0.210551839389044 0.209533283011403 0.215136337877529 0.22737345415889 0.209533283011403 0.211437584806011 0.209533283011403 0.218508635047289 5 5 + 9860592 9860880 9860735.909 9859858 9861133 + gene protein_coding_gene TRUE TRUE AT5G27820.1 ribosomal protein L18 family protein similar to 50S ribosomal protein L18 family [Arabidopsis thaliana] (TAIR:AT3G20230.1); similar to ribosomal protein L18 family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98333.1); similar to Os03g0694800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050972.1); similar to Os01g0256600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042627.1); contains InterPro domain Ribosomal protein L18P/L5E; (InterPro:IPR005484) 0.682955314016209 7.06075254543434 2.57344868604093e-05 0.000611718790737557 11.0289077045537 9.90031068054317 0.682955314016209 0.0899809078420247 AT5G20030_at 3.89678222095015 3.98151405401255 3.87579489702671 4.07150594474686 4.83298349865582 4.221679843781 3.18101272657522 3.44284618044116 3.39320786789965 3.24024054329261 4.12961052938796 4.48944786029685 4.19770687009118 4.65248336148026 3.97218953743019 4.24255418781702 3.47929400916929 4.37389293621332 3.2164895709765 0.226808466964951 0.225414867400357 0.229774133432176 0.221520683084906 0.226691204563171 0.229914967601324 0.225969846850970 0.223001408143346 0.242366785846636 0.225067416360203 0.23170300114207 0.221332492540810 0.226182104339966 0.233695446812208 0.230785858582400 0.231083043492171 0.235624629587627 0.225817218923595 0.221486262663307 5 5 - 6765049 6765535 6765278.545 6764729 6766671 - gene protein_coding_gene TRUE TRUE AT5G20030.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G32440.1); similar to Agenet [Medicago truncatula] (GB:ABE92607.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain ENT; (InterPro:IPR005491) 0.766893500660332 7.05478492192637 2.59282349342537e-05 0.000615522805411611 11.0215867354860 7.67574495687802 0.766893500660332 0.120857493542734 AT5G13390_at 8.32140357871537 8.5400817722346 8.81647161729262 8.92270814336032 9.00104085292682 8.82531727560646 8.23145839071912 8.20684655181116 8.3092833212733 8.22903551431384 8.79040855224765 8.95799829133163 8.92040262653745 8.96467627360799 8.90213696903195 8.77403969768642 8.29207581623013 8.99875183496395 8.01458661323246 0.116010020990756 0.115641636011288 0.124477199995573 0.115337008116357 0.118300266221675 0.126814632966054 0.123176748333073 0.129929521120875 0.123550096321800 0.117915363514258 0.121695523031449 0.114309050612306 0.118152732765170 0.119477069031118 0.118930807196574 0.119249645072828 0.142986554611550 0.118734189416545 0.121565911132199 5 5 + 4296029 4296502 4296223.273 4292750 4296728 + gene protein_coding_gene TRUE TRUE AT5G13390.1 NEF1 (NO EXINE FORMATION 1) Required for normal pollen development and lipid accumulation within the tapetum similar to hypothetical protein MA4_111B14.46 [Musa acuminata] (GB:ABF72005.1) 0.603598170178968 7.05462102121847 2.59335783351532e-05 0.000615522805411611 11.0213855949361 17.1128475598222 0.603598170178968 0.0520865417021824 AT5G26230_at 3.19717670521466 3.8524109497815 3.42419761480722 3.48123295212543 3.4459536350388 3.71222069766806 3.98505766080643 3.84407273313794 2.88779833914663 3.0483149670601 5.00996539148752 5.3177589077546 5.39318736724441 5.12593098875826 4.74157531261294 4.63724207411798 4.30979609154244 5.14875212164398 3.65535561334764 0.246905140341384 0.247427942599028 0.256576376730331 0.263133468586200 0.247136380976628 0.262394098288463 0.246832949528795 0.257240737089106 0.260705257562236 0.249123794256198 0.253738543705971 0.253809176097546 0.255596987462178 0.276152827284585 0.248084183787781 0.247457301799535 0.262966254235735 0.254360797134687 0.255541232939852 5 5 - 9173608 9174093 9173792.727 9173520 9174545 - gene protein_coding_gene TRUE TRUE AT5G26230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42750.1); similar to Os05g0390600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055441.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001078830.1) 0.779795719025946 7.05408858717905 2.59509446413715e-05 0.000615522805411611 11.0207321607689 7.6966315377792 0.779795719025946 0.125193997370604 AT5G45370_at 2.68772141952904 2.74861964592495 3.85878730691063 3.68971162991217 3.64205929566898 3.18059774410939 2.90683759265018 2.3693634808004 2.45114675113758 2.20030666094826 2.72187172688647 3.25529776748491 2.82696467174723 3.09431200836869 2.74496140484261 3.11204198692415 3.12419542449730 3.27016449342086 2.44665464712993 0.195939150769056 0.193975276786976 0.202099409262696 0.204428787100040 0.195322735154342 0.194241805676599 0.198091216403610 0.192244283385783 0.20049876896804 0.193243156200237 0.216162375041593 0.190922848833401 0.190922848833401 0.198709994740391 0.203559784553682 0.192995857451924 0.193783822984190 0.202732360405816 0.200511326471471 5 5|0 +|/ 18406654 18407197 18406909.1 18405518 18407647 + gene protein_coding_gene TRUE TRUE AT5G45370.1|AT5G45370.2|AT5G45370.3 nodulin-related / integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G19185.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE84659.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 0.783671812603542 7.0540775512019 2.59513047323105e-05 0.000615522805411611 11.0207186163536 5.82784336706827 0.783671812603542 0.126474472212016 AT5G66890_at 2.16629728571616 2.48192127243063 4.15020289486561 4.42622778932586 2.37459565629009 2.29496976080113 1.67704378520988 1.790220803917 2.02158093532713 2.04116991060197 2.03472905619366 2.31634704317798 2.07362982804082 2.16737523064310 1.91873568544377 1.62826933500445 2.49845451676296 1.95816204381247 2.10760899404693 0.235429066767573 0.237821981620654 0.266336234571572 0.254720254970779 0.247207677238493 0.238177972703281 0.237647576460631 0.235429066767573 0.240675094440259 0.246532586752933 0.239031746634419 0.237740140803998 0.240387542159554 0.237006529204121 0.237764440289947 0.237194855560191 0.242599160747842 0.240859546376944 0.241582842488164 5 5 - 26730174 26730737 26730461.818 26730170 26731609 - gene protein_coding_gene TRUE TRUE AT5G66890.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g66890 [Arabidopsis Thaliana] (GB:Q9FKZ2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G66900.1); similar to Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABE88570.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.650152233780907 7.0509694230704 2.60529337451831e-05 0.000617595427481086 11.0169033441309 4.73580963392467 0.650152233780907 0.07641055479851 AT5G55500_at 6.60610570488029 6.61885385908097 7.3695530710792 7.27211283009746 7.62600692747378 6.64990827730592 5.95963265093199 6.23282947258582 6.40867774322062 6.21228945225244 7.63260897678132 7.52396708136138 7.09794012604185 7.32249202043026 7.4618713218353 7.40788663754948 7.10672342115287 7.22933865969952 6.36720178633826 0.201613668982047 0.204107025953502 0.222853906455580 0.20394832397732 0.201613668982047 0.217125721312736 0.214571917242300 0.211206426799484 0.207971752888723 0.209205711281531 0.203138379360209 0.206183310947812 0.215513212604421 0.205449274254304 0.206390605025236 0.201613668982047 0.209794159069002 0.205553179510218 0.208091108010535 5 5 + 22501114 22501577 22501303.545 22499386 22501857 + gene protein_coding_gene TRUE TRUE AT5G55500.1 AtXylT ("ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE"); xylosyltransferase Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions. Identical to Beta-(1,2)-xylosyltransferase (EC 2.4.2.38) (XYLT) [Arabidopsis Thaliana] (GB:Q9LDH0;GB:Q9LKK7); similar to putative putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum] (GB:CAF25342.1); similar to putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum] (GB:CAF25343.1) 0.946751862311022 7.04959653690619 2.60979605071874e-05 0.000618324738144592 11.0152176764129 13.6304969447846 0.946751862311022 0.176232381163715 AT5G38150_at 4.58806715112551 4.91078666086488 5.55538438638919 5.5554910784 6.71336212945032 5.87324887094719 5.84590463341896 5.32286269629242 5.13745216841508 4.92525343767786 6.30099331204204 6.34062698515668 6.03494933036778 6.26113310549946 5.6240265267214 7.36577305427113 5.75489896723386 5.70365440366607 4.96871491288801 0.253038464710996 0.262537068576003 0.261279660388939 0.259787534998890 0.252202026291003 0.265966475101928 0.267367735113512 0.258799434152356 0.253247560005336 0.265522316662183 0.252202026291003 0.256910657680312 0.259654091392654 0.267428688195674 0.257189350374584 0.253199723172369 0.275112685252498 0.263652791165803 0.260170696059029 5 5 - 15240351 15240841 15240563.455 15240346 15242165 - gene protein_coding_gene TRUE TRUE AT5G38150.1 PMI15 (plastid movement impaired 15) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66840.1); similar to Os01g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043941.1); similar to myosin heavy chain-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82493.1); contains InterPro domain Protein of unknown function DUF827, plant; (InterPro:IPR008545) 0.960124892582026 7.04717556141355 2.61775659100217e-05 0.00061987205761753 11.0122444932478 11.1375036843345 0.960124892582026 0.180135778196770 AT5G53770_at 3.02556746768404 2.90336398416674 3.50261806349718 3.51082547440488 3.94576375365388 3.51499759700211 2.78195691412633 2.90050014773624 2.77297805972366 2.43192682237907 2.92251167739967 3.30962386651525 3.31545971982536 3.13234978248699 3.25758561202117 3.20763234267806 3.5228770687609 3.4630853082752 2.79302282998078 0.219106041411457 0.222706227481751 0.225184748677593 0.235019891226114 0.227666452684260 0.231013754832650 0.219067469434690 0.222312345254936 0.230217686690964 0.223796278425899 0.220312768551675 0.223567128188657 0.227301268617949 0.222496971885496 0.222902078021842 0.219282184612400 0.219478442991744 0.222367487104429 0.222856955583728 5 5|0 +|/ 21846352 21847060 21846684.6 21843882 21847209 + gene protein_coding_gene TRUE TRUE AT5G53770.1 nucleotidyltransferase family protein similar to MEE44 (maternal effect embryo arrest 44), nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT4G00060.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71308.1); contains InterPro domain PAP/25A-associated; (InterPro:IPR002058); contains InterPro domain PAP/25A core; (InterPro:IPR001201); contains InterPro domain DNA polymerase, beta-like region; (InterPro:IPR002934) 0.65805943096433 7.04512263582255 2.62452741276663e-05 0.000621136122082157 11.0097226672016 6.22688246342051 0.65805943096433 0.0801699022435006 AT5G28040_at 6.82527782196012 7.01896098514564 7.57959407901931 7.58972945132335 7.89402679835582 7.13938423287897 7.1039805259433 6.78034109531056 6.60263024501453 6.99775966396332 8.0061649869747 8.07664765341418 8.00194637956126 7.79425360118229 7.81743886499543 7.90960689825348 7.66393637062278 7.57184405378221 6.76297964198972 0.155745117512060 0.155389218167905 0.153393626795356 0.160515795111666 0.15887728189685 0.161922326342545 0.155047027209996 0.158250684182961 0.180438639493384 0.154715536028572 0.154970638100447 0.153937246116667 0.161032659100078 0.162910345957561 0.154085220696646 0.152078465304618 0.162555425396623 0.154734812174178 0.160790390587929 5 5 - 10037815 10038176 10037995.818 10037273 10039005 - gene protein_coding_gene TRUE TRUE AT5G28040.1 transcription regulator similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G04930.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96171.1); similar to hypothetical protein [Oryza sativa] (GB:AAG46131.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Protein of unknown function DUF573; (InterPro:IPR007592) 0.842991767040112 7.03613619908222 2.65438859536676e-05 0.000627860526879982 10.9986767327274 14.5629217244525 0.842991767040112 0.146007664484494 AT5G49940_at 10.6306014399866 10.5800459172920 11.3057379914868 11.2744792841499 11.3672479631194 11.2616468956354 11.1298962820823 10.9716235162391 10.5396859762344 10.7392054261747 11.3574884768545 11.1790060231889 11.1991624374959 11.2729594170077 11.3429461296137 11.3704364335092 11.2184502544497 11.3023678084210 10.5192937064914 0.0784346424414298 0.0771550006590078 0.0793726845498727 0.0766898465998229 0.0805910285819522 0.0783797613573136 0.0786672559471057 0.0771822222727254 0.0882140376299452 0.0795404491521124 0.075091763200347 0.0750307968705604 0.0772797718802661 0.0761597823926739 0.0756422493797247 0.075601151612131 0.0771931289755035 0.0777649775126886 0.0811388129643656 5 5|0 +|/ 20332923 20334422 20333903.7 20332624 20334626 + gene protein_coding_gene TRUE TRUE AT5G49940.1|AT5G49940.2 NFU2 (NFU domain protein 2) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast. Identical to NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V) (NIFU2) [Arabidopsis Thaliana] (GB:Q93W20;GB:Q9LTX6); similar to NFU3 (NFU domain protein 3) [Arabidopsis thaliana] (TAIR:AT4G25910.1); similar to Os11g0181500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065900.1); similar to Similar to seven transmembrane protein Mlo4 [Oryza sativa (japonica cultivar-group)] (GB:AAX96187.1); contains InterPro domain Nitrogen-fixing NifU, C-terminal; (InterPro:IPR001075) 0.577596665482645 7.03296054971842 2.66502832046600e-05 0.000630033496049425 10.9947705889557 22.0050334906828 0.577596665482645 0.034496016055007 AT5G26720_at 4.54431312821606 4.64943638535413 5.60061117057784 6.07836199071205 5.9904286618421 5.18663673455153 5.08433179096744 5.11010599635075 5.18995441611063 4.98195159107732 6.36948361960716 6.04882005477719 6.10139363111994 6.24258968823391 5.68078948656499 6.07344329321714 6.01152761348251 5.44572920849028 5.02776293291802 0.207512152536666 0.19843817170449 0.205882276925084 0.209509878898608 0.200954531562818 0.207118895788115 0.201260958211082 0.207661004740647 0.216015823298606 0.204782445285947 0.203965453576215 0.207300245601679 0.201320916315088 0.201413399505077 0.204609857745278 0.208644444900668 0.205085669437540 0.202244066128141 0.204139303175419 5 5 + 9304108 9304488 9304320.545 9304028 9304746 + gene protein_coding_gene TRUE TRUE AT5G26720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05935.1); similar to hypothetical protein MtrDRAFT_AC149038g24v1 [Medicago truncatula] (GB:ABD32861.1) 0.898564287633383 7.03241192847098 2.66687107326143e-05 0.000630125557282051 10.9940956252914 10.8121674262241 0.898564287633383 0.162896063406534 AT5G59500_at 7.8517877808077 8.02826551540834 8.19290911161207 8.15241816574554 8.2785300078297 8.15628964381813 7.55566029663755 8.1755797715504 7.65894748423857 7.18445291706976 8.62865844066471 8.79890731649175 8.34650747597954 8.53863195938995 8.95266124860625 8.45090323791004 8.29877711787802 8.39670959135665 7.23152529781194 0.189204335257386 0.186724446772304 0.197665224334711 0.197491435548332 0.19414723959241 0.192765207853773 0.197556956534799 0.192958980857964 0.212771396025648 0.198983134642436 0.197124466898504 0.189638263976443 0.191036455489471 0.196620230959859 0.193771791930428 0.185970880300827 0.195143991004396 0.194285850704832 0.204060576290579 5 5 + 24003865 24004293 24004037.727 24003155 24004607 + gene protein_coding_gene TRUE TRUE AT5G59500.1 protein-S-isoprenylcysteine O-methyltransferase similar to hypothetical protein ST1187 [Sulfolobus tokodaii str. 7] (GB:NP_377119.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) 0.742687186655775 7.02205784623389 2.70190769427229e-05 0.000637492328781382 10.9813491827964 16.0038190941302 0.742687186655775 0.113746655731331 AT5G40330_at 2.80192644887349 2.92352731819359 3.0092424189941 3.04721956135278 2.55688915608861 3.06270956060429 2.38313355511467 2.51196154795479 2.74834367084142 2.36650933530560 3.08766044312147 3.60454194952136 4.18405554711749 3.88083690887200 3.39311516812419 3.95753201437500 4.14436531664182 3.59470986157248 2.74915864672928 0.228234785398363 0.228234785398363 0.229124673152801 0.235354744756256 0.229647939937167 0.233844651379246 0.232857329564252 0.241405241633006 0.239854037032129 0.232909870893883 0.232586034457867 0.231273692921536 0.229855112575071 0.243246663768810 0.233059726242621 0.241538651507298 0.238523480968755 0.228234785398363 0.234647551599162 5 5 + 16145154 16146637 16146165 16144953 16146883 + gene protein_coding_gene TRUE TRUE AT5G40330.1 MYB23 (myb domain protein 23); DNA binding / transcription factor Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1. similar to GL1 (GLABRA 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G27920.1); similar to werewolf [Cucumis sativus] (GB:AAM23006.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.6866964451343 7.02199958684185 2.70210623157146e-05 0.000637492328781382 10.9812774197687 5.96317088029387 0.6866964451343 0.092980447561497 AT5G64290_at 10.1185573607812 10.0870116857524 10.7473958991150 10.6897126933426 10.4885031160570 10.4533521545811 10.3851808186503 10.4268570505147 10.4322333175020 10.0402133167474 10.9910340723848 10.8814571744413 10.6779090401823 10.8759720164085 10.8717209541147 10.7674144613348 10.6689304672329 10.9630053509882 9.69550823723233 0.090549997189079 0.0804126635265679 0.0859278916795717 0.0830372483747816 0.0848890678631882 0.0814169863304638 0.0844866520496836 0.0800183871759458 0.089374435014281 0.084787166846176 0.0820834467393689 0.0826458839207866 0.0825581161750811 0.0886685879023088 0.0843395842254993 0.0800183871759458 0.0896925701914033 0.0840597285797164 0.087652052184933 5 0|5 /|- 25731995 25732330 25732149.5 25731404 25733984 - gene protein_coding_gene TRUE TRUE AT5G64290.1 DCT/DIT2.1 (DICARBOXYLATE TRANSPORT); oxoglutarate:malate antiporter similar to DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64280.1); similar to glutamate/malate translocator [Spinacia oleracea] (GB:AAM89396.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) 0.560767360912288 7.0218956902175 2.70246033115117e-05 0.000637492328781382 10.9811494403149 20.8711540469975 0.560767360912288 0.0147807124389067 AT5G11070_at 9.46945605122254 9.62563439641885 9.80633311887898 9.97499938243033 10.5737618121308 10.2163272947018 9.3754062994145 9.41057079525853 9.16470475751798 9.31754974565832 10.2019790728076 9.82239860587792 9.6761623266819 9.91759913513468 9.8707995927903 9.74484532284107 9.5067269940472 9.98913548218208 9.21530595445169 0.101448597159061 0.108885825706601 0.109329879973576 0.108627662556031 0.107957960445167 0.107447334884368 0.105590880785669 0.104594824740713 0.124968008750778 0.104441998290713 0.106583093464098 0.104740039102174 0.103638656881085 0.104100142726669 0.109323599008548 0.101014350215913 0.107372590645802 0.106556397730925 0.104944366049220 5 5 - 3516444 3516874 3516621.364 3516218 3516996 - gene protein_coding_gene TRUE TRUE AT5G11070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35090.1) 0.640637090229775 7.00928211079355 2.74582328948833e-05 0.000647026832077516 10.9656008287082 19.3434241283510 0.640637090229775 0.0737943641253995 AT5G10250_at 4.15659550106164 3.65424057314943 4.99119982640010 4.37763570652172 6.20067129056509 5.4838795752792 6.04726929221867 5.72840530611286 5.55401221973236 6.44438141124756 8.42058737574245 7.8878944395539 8.86857709230166 8.37134705020405 7.54875001515753 8.50491057902202 7.89802814717258 7.50596473819186 7.47490589271415 0.220634710542798 0.223456247019867 0.217271329822401 0.215338999530833 0.215338999530833 0.222521050159162 0.217438779153273 0.222575017371828 0.230975798554582 0.220922600780326 0.215338999530833 0.215338999530833 0.219454242416295 0.217562187467466 0.219588708638482 0.219870117906908 0.218349905196664 0.221492358274199 0.215338999530833 5 5|0 -|/ 3217152 3217736 3217474.889 3217029 3219369 - gene protein_coding_gene TRUE TRUE AT5G10250.1 phototropic-responsive protein, putative similar to NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3), signal transducer [Arabidopsis thaliana] (TAIR:AT5G64330.1); similar to 80A08_21 [Brassica rapa subsp. pekinensis] (GB:AAZ67606.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 1.00068825999639 7.0092704636224 2.74586367459307e-05 0.000647026832077516 10.9655864610559 12.3884157693634 1.00068825999639 0.193038269944679 AT5G54180_at 4.26131479842262 5.03476365461257 5.23028789509041 5.12053809984377 6.28066914986235 5.99124619621253 5.96829279974412 6.10357964651944 4.99333868698805 5.15162509624914 6.16033380907644 6.97175552247136 6.36096181223766 6.24227035949503 7.03089970738197 6.42047386470575 6.35000387131972 5.79504005746726 5.00927299151677 0.253175826004417 0.250226481584475 0.245348177994694 0.245348177994694 0.24915249423431 0.263261799296442 0.245706877657429 0.250339944687496 0.252200845642805 0.256994268123542 0.245348177994694 0.248653600072767 0.259381657587361 0.249588202322284 0.245348177994694 0.245348177994694 0.253221679001515 0.250041120331628 0.257646538385165 5 5 + 22006821 22007362 22006997.727 22005683 22007454 + gene protein_coding_gene TRUE TRUE AT5G54180.1 PTAC15 (PLASTID TRANSCRIPTIONALLY ACTIVE15) similar to EMB2219 (EMBRYO DEFECTIVE 2219), transferase [Arabidopsis thaliana] (TAIR:AT2G21710.1); similar to Os07g0134700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058844.1); similar to mTERF [Medicago truncatula] (GB:ABE87961.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.839376363847826 7.00459930984339 2.76211198506998e-05 0.000650502000058379 10.9598227090953 11.2327763469238 0.839376363847826 0.146058169853107 AT5G11000_at 6.06976839339338 7.00865659885215 6.70856111422924 7.01746793228828 7.20064645358562 7.06649148980084 5.1072300008835 6.03885002858924 6.36850182348893 5.29309274662158 7.54106526923109 7.97701672665261 6.92774378639355 7.75643532063036 7.5433175620692 7.27664170780013 5.34022909159798 6.65746143427708 5.59301219823152 0.207185094731633 0.198424770738021 0.200644308623278 0.202069834760163 0.208171735175788 0.199883479637978 0.201932842350561 0.205520412493159 0.205239538160583 0.199966173860628 0.203917371824749 0.214891384650947 0.206163808001083 0.200868771329065 0.195918765607511 0.195918765607511 0.213610174748305 0.204603299742980 0.218089453205197 5 5 - 3479178 3479727 3479378.727 3479030 3480426 - gene protein_coding_gene TRUE TRUE AT5G11000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25200.1); similar to Os08g0439600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061898.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28921.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) 1.15905938246529 7.00401028555723 2.76416820612722e-05 0.000650632845715746 10.9590956924655 12.9667212273422 1.15905938246529 0.236195711474198 AT5G54200_at 3.36865989696111 3.11930267122289 2.95749310990187 3.35703606860266 3.39013809463256 3.54506760093941 3.42299339038686 3.30057321670548 3.59778661983511 3.33980750748013 5.25221100968678 5.53616325011114 4.61809428114338 4.4867941153211 5.36243262199398 4.46027843888613 4.47526165392738 4.33023735899217 3.49599907551204 0.233206005957538 0.238938785380695 0.242223518580013 0.244911680447193 0.238792006642589 0.239342056895294 0.237147150519756 0.233057978628691 0.235534285929875 0.233532060160362 0.247745978010196 0.234729553536992 0.237303961366214 0.247024951820698 0.242591404402067 0.232000161223062 0.239868007769715 0.243219687296561 0.237593931021610 5 5 - 22010830 22011601 22011103.091 22010575 22014302 - gene protein_coding_gene TRUE TRUE AT5G54200.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G15470.1); similar to OSJNBa0074L08.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE02139.2); similar to Os04g0678300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054272.1); similar to H0801D08.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86247.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.673435557507685 7.00292035815699 2.76797737365035e-05 0.000651175935900702 10.9577502962039 7.4541822522692 0.673435557507685 0.0883771467549976 AT5G61000_at 2.46619090447081 2.31002346754247 3.64030620416432 3.90420297841031 2.21412934962883 2.09055735210206 2.93819245749405 2.80733172587069 2.67868904394271 3.24254060360805 3.93669940165843 4.55789281558242 3.0180657551796 3.83000149898248 4.78907909543055 3.08536993805553 3.46834912967296 3.49109723511754 2.70115063479002 0.235494664798656 0.226543556335733 0.226089001150198 0.225892074027862 0.226110790501026 0.233915011798147 0.223339760528437 0.232305946747124 0.223228923816009 0.226291013030808 0.242161602821507 0.247018410750211 0.226719608768785 0.235394869785216 0.239075288649068 0.233099254355661 0.225324470377636 0.235359456817079 0.232142509430522 5 5 - 24566930 24567742 24567333.545 24566804 24569947 - gene protein_coding_gene TRUE TRUE AT5G61000.1 replication protein, putative similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT5G08020.1); similar to Os03g0214100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049369.1); similar to replication protein A1 [Oryza sativa] (GB:AAB71836.1); similar to replication protein A 70b [Oryza sativa (japonica cultivar-group)] (GB:BAC77529.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Transaldolase; (InterPro:IPR001585); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.614903465080779 6.99552941252793 2.79395741262209e-05 0.000656810053543829 10.9486225764384 6.11946486470554 0.614903465080779 0.0615316647159196 AT5G67260_at 7.8737624125323 8.10645968771443 8.77936402714844 8.79537702457098 9.69113356977386 9.19525523423996 8.83022969348375 8.57311211730835 7.87244425888173 7.99957145849018 8.60429222923807 8.62203747660006 8.5554037512658 8.4718361519434 8.81736620687139 9.09376653513288 8.74170243506613 8.51781800417486 8.18106911464351 0.135038172194257 0.123668009363940 0.126495172125785 0.126699929561419 0.125864919878408 0.132256540793641 0.121837675911225 0.130434565862638 0.151125927118670 0.135819199152828 0.122194997381613 0.121837675911225 0.123675502991683 0.127065363901589 0.127294155640798 0.123721215114193 0.133993293208212 0.131282729139069 0.128311625347731 5 5 + 26854206 26854853 26854434.909 26853374 26855037 + gene protein_coding_gene TRUE TRUE AT5G67260.1 CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinase similar to CYCD3,3 (CYCLIN D3,3), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT3G50070.1); similar to cyclin D3-2 [Euphorbia esula] (GB:AAS48460.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.71486219547752 6.99524672601518 2.79495628654937e-05 0.000656810053543829 10.9482733098531 17.0784481172424 0.71486219547752 0.104753006996530 AT5G51220_at 6.42666193096373 6.49878846194484 7.19766465336284 7.19730313041847 7.07682594189116 6.81128934851529 6.72167546220378 6.59659425692116 5.60011480079157 5.72781150195672 6.11092679310521 6.29105844572351 6.00446907305588 6.46585189855524 6.4484467478687 6.73464336189277 6.40604392636467 6.32443178468432 5.65644049312602 0.222027982992688 0.200371273586483 0.211768924522409 0.200371273586483 0.206993435242705 0.216931415844851 0.205673574078898 0.221599377730939 0.242718050327513 0.211002259586015 0.209048675433174 0.200751010779131 0.205398676407111 0.212869011259907 0.200371273586483 0.210181720819353 0.224474183747562 0.210399813900877 0.202548607788572 5 0|5 /|- 20838566 20839194 20838779.429 20838441 20840492 - gene protein_coding_gene TRUE TRUE AT5G51220.1 ubiquinol-cytochrome C chaperone family protein similar to Ubiquinol cytochrome c reductase assembly protein CBP3 (ISS) [Ostreococcus tauri] (GB:CAL50389.1); similar to Os07g0490300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059673.1); contains InterPro domain Ubiquinol-cytochrome C chaperone; (InterPro:IPR007129) 0.59830957291004 6.98866901715744 2.81830752287159e-05 0.000661938780624192 10.9401432046079 12.8206951995432 0.59830957291004 0.0523064291411801 AT5G55390_at 7.9748028303369 7.88471335743626 8.48630777892475 8.59981486532322 9.06743833841603 8.83675117489446 7.8712604461048 8.10779251484285 7.91873579254114 7.98625513361374 8.4846771974727 8.51626317364797 8.75810962933372 8.16950882770045 8.2592011714738 8.87451696960106 8.20729987552985 8.62589412461043 8.22670877020143 0.145241244912121 0.141915105386532 0.146033066848250 0.143318285415528 0.144222786407010 0.141887599556345 0.142225190604954 0.141156827087165 0.160540657415277 0.139206981632901 0.145894382891578 0.142646035143206 0.138559604548985 0.149829274376826 0.156265525936942 0.143946537584525 0.167162169202546 0.144095812885259 0.142133429431098 5 5 - 22465405 22465952 22465668.455 22465192 22471640 - gene protein_coding_gene TRUE TRUE AT5G55390.1 EDM2; transcription factor Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. similar to ELP1 (EDM2-LIKE PROTEIN1), zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G48090.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01751.1); similar to Os08g0502000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062167.1); similar to Os08g0337300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061580.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.615484862297615 6.98303728779643 2.83846738615578e-05 0.000666312798894091 10.9331775001257 16.6190270482632 0.615484862297615 0.0624350814006697 AT5G67330_at 8.97812723335384 9.20075116088416 9.8456274878447 9.82517303870651 10.1935083325102 10.1864286730369 9.54133797777348 9.74196360600997 9.17057728001529 9.80956085415313 9.70218176147788 10.0006297746259 10.5226513082168 10.0003855550213 9.66696785683007 10.5361741271425 10.2577503456124 9.59557778103046 9.48583415473134 0.114280930196222 0.102770873732152 0.109326752111758 0.110735210845180 0.107374354808160 0.115778911847571 0.111279656396069 0.104449762660874 0.118399292834115 0.105423436382478 0.103365727126316 0.105178153804809 0.103499636715095 0.111975200722825 0.108250095267511 0.106241250924248 0.116091114529941 0.108692495295454 0.109197807711904 5 5 + 26880242 26880752 26880521.636 26878953 26881123 + gene protein_coding_gene TRUE TRUE AT5G67330.1 ATNRAMP4 (Arabidopsis natural resistance-associated macrophage (NRAMP) protein 4); manganese ion transporter/ metal ion transporter Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. Identical to Metal transporter Nramp4 (AtNramp4) (NRAMP4) [Arabidopsis Thaliana] (GB:Q9FN18;GB:Q9SNV8); similar to NRAMP2 (NRAMP metal ion transporter 2), metal ion transporter [Arabidopsis thaliana] (TAIR:AT1G47240.1); similar to NRAMP3 (NRAMP metal ion transporter 3), manganese ion transporter/ metal ion transporter [Arabidopsis thaliana] (TAIR:AT2G23150.1); similar to NRAMP5 (NRAMP metal ion transporter 5), metal ion transporter [Arabidopsis thaliana] (TAIR:AT4G18790.1); similar to Nramp metal transporter homolog [Thlaspi japonicum] (GB:BAC80141.1); similar to ferrous ion membrane transport protein DMT1 [Glycine max] (GB:AAO39834.1); similar to Nramp metal transporter-like protein [Thlaspi caerulescens] (GB:AAW47269.1); contains InterPro domain Natural resistance-associated macrophage protein; (InterPro:IPR001046) 0.596885886315315 6.97784498774902 2.85719180570755e-05 0.000670345304109816 10.9267513548189 19.4510883104539 0.596885886315315 0.0519972570802105 AT5G53850_at 8.88426842326848 8.93265061174666 9.67928412530588 9.54365071653385 9.89222905036393 9.57871455571085 9.2835118222081 9.15398130822999 9.1113038752889 9.2747953741283 9.9456471635787 10.0107917070292 9.61773158379974 9.76085547913259 9.90285722556326 10.0386303157204 9.65885218534662 9.8942368559961 9.29987283708985 0.126383901248105 0.132813826345183 0.124597567240923 0.133654881932783 0.124678017614515 0.127779147117505 0.125722602133585 0.136012718240384 0.133566566563061 0.131661683746741 0.125820400304837 0.126826083646016 0.127956209770407 0.120962223977501 0.129883391997760 0.124209185255403 0.141655121238934 0.124095350296657 0.129682048174486 5 5|0 -|/ 21878392 21879233 21878776.444 21878223 21882199 - gene protein_coding_gene TRUE TRUE AT5G53850.1|AT5G53850.2|AT5G53850.3 haloacid dehalogenase-like hydrolase family protein similar to Os11g0484000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067908.1); similar to APAF1 interacting protein [Homo sapiens] (GB:AAH08440.1); contains InterPro domain Class II aldolase/adducin, N-terminal; (InterPro:IPR001303)|similar to Os11g0484000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067908.1); similar to Os01g0101200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041741.1); similar to P0402A09.8 [Oryza sativa (japonica cultivar-group)] (GB:BAB62625.1); contains InterPro domain Class II aldolase/adducin, N-terminal; (InterPro:IPR001303); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; (InterPro:IPR010041) 0.617454761483568 6.97675919267775 2.86112417241387e-05 0.000670904859793012 10.9254070623622 18.9097151650159 0.617454761483568 0.0637740482966664 AT5G06660_at 7.38329359659237 7.50353400150666 7.80204768159955 7.82943467839258 8.6463890237592 7.9205816650053 7.63001885108898 7.41270192963554 7.05590561696563 6.06766066028652 7.3650824055796 7.82134899302394 7.70092209924526 7.43918854960592 7.77089558104419 7.31578346722248 7.47995001553055 7.46079155115884 6.44788402010413 0.216307598372806 0.204837556381722 0.215405420779929 0.208068923587890 0.208982319397931 0.207310811987571 0.209637523024697 0.204123033305779 0.211213111987150 0.214217182985224 0.206677048551752 0.204142697779202 0.204478871260468 0.209560285127938 0.210773451892254 0.202154003852193 0.214371041422378 0.203164112368388 0.206031307606073 5 5 + 2046884 2047422 2047140.909 2046811 2047795 + gene protein_coding_gene TRUE TRUE AT5G06660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12030.1); similar to fiber protein Fb27 [Gossypium barbadense] (GB:AAQ84318.1); contains InterPro domain Protein of unknown function DUF841, eukaryotic; (InterPro:IPR008559) 0.793827367249599 6.97144781158597 2.88044425020046e-05 0.000674831484401671 10.9188287962020 14.8000312277409 0.793827367249599 0.132839128142313 AT5G51670_at 2.69679375090501 2.18705101223175 2.6969884472561 2.79055041956511 2.44035828062797 2.83906236915233 2.26001368324438 2.83254765749322 3.15075406699164 2.7850375744511 5.32507843260271 4.63930872521782 4.60414838132953 5.13030169125489 4.38643346257737 4.9057835554659 3.80829165187963 4.07173017027185 3.38717475239628 0.268569681190422 0.248867416959114 0.246674672604248 0.246709036238133 0.246143599904829 0.243432581970839 0.254769482888992 0.249404558664911 0.256296455383086 0.241775353260252 0.240278109810696 0.249249578717826 0.240208395979903 0.245016863610082 0.239238950275759 0.247341118588353 0.245573520062882 0.252461174803846 0.247988149512755 5 5 + 21011730 21012298 21012015.091 21010786 21012322 + gene protein_coding_gene TRUE TRUE AT5G51670.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23160.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP21394.1); similar to Os03g0858600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051962.1); contains InterPro domain Protein of unknown function DUF668; (InterPro:IPR007700) 0.84943369869687 6.97130040154062 2.88098245100019e-05 0.000674831484401671 10.9186461688023 6.45119068927847 0.84943369869687 0.150403480330898 AT5G45390_at 10.6344724154402 10.8044195115720 11.2644049883517 11.2639421297629 11.1382933534671 11.0333377671554 10.7796233068629 10.9212091945963 10.7002369495734 10.6180559637844 11.4390759954266 11.465736351709 11.4106543896965 11.3939122381946 11.5733840596128 11.5909781524176 11.0320446457182 11.4995721916150 10.6365354299941 0.0859686840557558 0.084717120225601 0.0876227697895573 0.0815248617766696 0.0830207130288314 0.0831603544145214 0.0860695314358121 0.0828149818385167 0.098400111597634 0.0901652949234134 0.0839526423637088 0.0858499006491502 0.0815248617766696 0.0860518950110866 0.0837652209922437 0.0822609277031731 0.0913840686636956 0.0916464832081223 0.0841484622696066 5 5|0 +|/ 18413892 18414778 18414447.6 18413529 18415343 + gene protein_coding_gene TRUE TRUE AT5G45390.1 CLPP4 (Clp protease proteolytic subunit 4); endopeptidase Clp One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). similar to CLPP3 (Clp protease proteolytic subunit 3), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G66670.1); similar to ATP-dependent Clp protease, proteolytic subunit (ISS) [Ostreococcus tauri] (GB:CAL53944.1); similar to Os10g0580800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065516.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) 0.582061878915637 6.9700935656831 2.88539273644772e-05 0.000675499596940362 10.9171508956912 22.0186024338174 0.582061878915637 0.0423699415272148 AT5G16050_at 9.65895912867915 9.90383456814226 10.4778389291064 10.5192637229123 10.7447886056417 10.4062145744431 10.0682048778549 9.992663601092 9.256280191054 9.14339508212843 9.88856851771577 9.86698903059239 9.97909897619376 9.83496907538698 9.65136118081362 9.98281056370168 10.0034898818811 9.91919212377706 9.34541250978478 0.156683715698916 0.149413815194454 0.155220711501239 0.155402588420749 0.147763165801961 0.150794480325047 0.149960783179081 0.143952495464569 0.158345545088827 0.154078006857475 0.143952495464569 0.147066290782361 0.14570792163758 0.15081335391519 0.147895659818946 0.144019129959326 0.158879041946021 0.152828711152371 0.155509906087078 5 5|0 -|/ 5244292 5245077 5244846.875 5243748 5245823 - gene protein_coding_gene TRUE TRUE AT5G16050.1 GRF5 (GENERAL REGULATORY FACTOR 5); protein phosphorylated amino acid binding Encodes GF14 upsilon chain, a 14-3-3 gene family member. Identical to 14-3-3-like protein GF14 upsilon (General regulatory factor 5) (GRF5) [Arabidopsis Thaliana] (GB:P42645); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96912.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.636779119259606 6.96620830911544 2.89964052295017e-05 0.000678468803890071 10.9123356567611 19.7910572575241 0.636779119259606 0.0738314665716101 AT5G28050_at 9.73047954237464 9.86295846564478 10.1924932377781 10.3563304480285 10.2172616633299 10.2976278440465 9.88359923667734 9.899040320304 10.0118068976707 9.6270729557069 10.5662524406801 10.5347468714895 10.3988466996922 10.4131484696442 10.39780495193 10.4042258247998 10.2325902018126 10.6435723279419 9.5086014844793 0.0886926654970487 0.0842455624124592 0.0841676108218865 0.0835440872288706 0.0825766884465026 0.0843429584240515 0.0896489812795798 0.0836708141974962 0.0894652619095982 0.0852761041916745 0.0856350433170359 0.0839848263619777 0.0854446685477338 0.0863756591797798 0.0848818741369124 0.0825734216906828 0.0875254607191847 0.0878033929247391 0.0845920121802534 5 5|0 -|/ 10044254 10045075 10044594.6 10043918 10045979 - gene protein_coding_gene TRUE TRUE AT5G28050.1|AT5G28050.2 cytidine/deoxycytidylate deaminase family protein|hydrolase/ zinc ion binding similar to cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] (TAIR:AT3G05300.1); similar to deoxycytidine deaminase [Brassica oleracea] (GB:AAL67435.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125) 0.577490133962688 6.96559147457333 2.90190949971889e-05 0.000678633472605408 10.9115709797099 20.1373366378319 0.577490133962688 0.039115884732891 AT5G49280_at 1.71660133218044 2.14785437971706 3.43312889596751 3.03140243328077 2.20396251835923 1.96170144424113 2.15526584453953 1.74835424745575 2.02132521451211 2.01824710093490 3.02579576031551 3.19395650146521 2.57029768767129 2.67987985219784 3.15272969962592 2.88955793361313 3.21492299924059 3.35274062674167 2.41590143406308 0.270106232181821 0.271235125203045 0.276107784985383 0.285270370704103 0.2625379374185 0.272566935873646 0.2625379374185 0.276427030485668 0.272289295847769 0.280526268858369 0.2625379374185 0.267293865215785 0.263783392895663 0.264709326792343 0.268786275847131 0.2625379374185 0.279638168119524 0.272778389159870 0.2625379374185 5 5 - 19994068 19994515 19994248 19993820 19994675 - gene protein_coding_gene TRUE TRUE AT5G49280.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G06750.1); similar to OJ1116_C07.3 [Oryza sativa (japonica cultivar-group)] (GB:BAC00686.1); similar to Os01g0309100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042851.1) 0.786845210713919 6.96384661640609 2.90833817648161e-05 0.000679770216659685 10.9094076244071 4.88068874485714 0.786845210713919 0.13084017767022 AT5G53530_at 8.47155982361719 8.8246598552575 9.22024745837378 9.22368176814662 9.6552334110930 9.11749289075748 8.320272992621 8.72823885547832 8.38812877106406 8.11109964227467 9.23205100765819 9.00149629143533 9.08953358184089 9.21539992894385 8.88433737099227 9.06301382896781 8.57973801734735 9.05251322973519 7.96434719131528 0.129117247449346 0.122473448050272 0.124694283662440 0.125582888896088 0.128534492411607 0.119484146342021 0.123139972942783 0.131371127493959 0.122876324316952 0.123000344484216 0.120407543957431 0.120672457061598 0.117423813808520 0.122558415210239 0.121661081762902 0.123166469608351 0.129918515056565 0.125284916291075 0.126161429166419 5 5|0 -|/ 21763515 21764561 21764046.875 21763261 21765821 - gene protein_coding_gene TRUE TRUE AT5G53530.1 vacuolar protein sorting-associated protein 26, putative / VPS26, putative Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. similar to vacuolar protein sorting-associated protein 26, putative / VPS26, putative [Arabidopsis thaliana] (TAIR:AT4G27690.1); similar to vacuolar protein sorting-associated protein 26-like protein [Solanum tuberosum] (GB:ABA46760.1); contains InterPro domain Vacuolar protein sorting-associated protein 26; (InterPro:IPR005377) 0.789108102956499 6.95720551540599 2.93294690730982e-05 0.000685152697439844 10.9011697531587 17.5298161862513 0.789108102956499 0.131827727031617 AT5G18230_at 8.30631417876203 8.33423228561808 9.22190385125612 9.05916394507471 9.46140991940557 8.98674265350012 8.74246244339484 8.40838045492472 8.28284374998992 8.45417706115481 9.05232012590191 9.20139623097682 9.10301393619805 9.3065468691523 8.97860665526114 9.19645171897203 8.79970637564435 9.06431514157874 8.47177284275436 0.134695571931590 0.128671369092142 0.134408287278919 0.135883573845092 0.130932881968291 0.131592981411292 0.136145449682614 0.130019317766129 0.144134374113698 0.129329410714079 0.128294521804419 0.127314415341209 0.128578242981403 0.130944726730468 0.129247364566752 0.129655870766694 0.143900444319861 0.132650817196421 0.130366052416625 5 5|0 -|/ 6021805 6022443 6022250.8 6021446 6027251 - gene protein_coding_gene TRUE TRUE AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07705.2); similar to Os03g0652100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050795.1); similar to Not1 N-terminal domain, CCR4-Not complex component family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97930.1); contains InterPro domain Not CCR4-Not complex component, N-terminal; (InterPro:IPR007207); contains InterPro domain NOT2/NOT3/NOT5; (InterPro:IPR007282) 0.709660582689257 6.9527397959769 2.94962068561826e-05 0.000688676730444577 10.8956268060837 17.5604391413305 0.709660582689257 0.104434365478988 AT5G17070_at 6.10421880267636 6.38784740930595 7.10741699160356 6.76574286016211 7.74184972914735 6.81275611898942 6.64177487916485 6.37830593029064 5.67743523593781 5.47284098553633 6.84022221847255 7.257541789394 6.66793641618388 6.64120176220867 7.15142410505784 6.68500052964733 6.10215538875301 6.21524641134802 5.36104152793323 0.206260168777342 0.197711279277076 0.197546350372805 0.196454743430589 0.205804953347855 0.219402377791620 0.200918655261904 0.208052154217391 0.212780761326482 0.221838739375217 0.200527232227308 0.200211977923079 0.200498426100147 0.201028687503119 0.195888000840502 0.198419243906199 0.227814355475994 0.215838186031011 0.203597698486009 5 0|5 /|- 5613712 5615194 5614154.25 5613371 5616141 - gene protein_coding_gene TRUE TRUE AT5G17070.1 similar to putative protein [Medicago truncatula] (GB:ABE91889.1); contains domain FAMILY NOT NAMED (PTHR16487); contains domain SUBFAMILY NOT NAMED (PTHR16487:SF4) 0.960111582056764 6.9496202182389 2.9613288505752e-05 0.000691038223861202 10.8917530480744 12.841920920552 0.960111582056764 0.183944752614965 AT5G33280_at 7.76203653381592 7.67166508377045 8.70449426516136 8.53891496499839 8.95510569871268 8.5506492907225 8.23320606908705 8.47120233344846 7.90184837392323 8.00154961328116 8.52849394288019 8.46439691836326 8.81940348604956 8.49719542476857 8.25914954142605 8.83690347395811 8.70023971594865 8.5868796130086 7.81741264782574 0.159016945776777 0.155221248461879 0.171193784687662 0.170143824297693 0.154230727026926 0.166591059118723 0.153604901915073 0.155106254724641 0.167836856366521 0.158917105846676 0.153247674052301 0.153646454427009 0.156547348305997 0.164573566654581 0.155779687236586 0.151029145470970 0.167792786341416 0.157657569780185 0.163981110894439 5 5|0 +|/ 12568708 12569454 12568968.3 12566510 12569737 + gene protein_coding_gene TRUE TRUE AT5G33280.1 chloride channel-like (CLC) protein, putative Identical to Putative chloride channel-like protein CLC-g [Arabidopsis Thaliana] (GB:P60300); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to ATCLC-A (CHLORIDE CHANNEL A), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to Cl- channel, voltage gated; IMP dehydrogenase related 1 [Medicago truncatula] (GB:ABE86345.1); similar to chloride channel-like protein [Oryza sativa (japonica cultivar-group)] (GB:ABB86548.1); similar to H0413E07.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86158.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) 0.66620471803763 6.94899836748516 2.96366870769556e-05 0.000691212219615932 10.8909806961049 16.6076691014115 0.66620471803763 0.0875271264731583 AT5G38630_at 7.784272439568 8.22328976471215 8.58696498034827 8.74887184620222 8.76515755595253 8.10310273951769 7.72441956197859 7.51235457190009 7.99900132248773 7.2358023942923 8.33623189502628 8.57983984116127 8.36496199928423 8.57709178643725 8.48030572174076 8.20972657515541 8.07172117944134 8.38509251577201 7.13627093696514 0.149132666451570 0.143505690197875 0.146391751116063 0.140546680619848 0.145871372112132 0.146535412931254 0.148047756956142 0.142393672605781 0.153774338523283 0.168356584323214 0.14659002087547 0.141727524158987 0.143372803067018 0.150204022333393 0.140546680619848 0.140546680619848 0.152393780449077 0.149576158347695 0.157188950779606 5 5|0 +|/ 15483470 15484689 15484324.6 15483222 15485415 + gene protein_coding_gene TRUE TRUE AT5G38630.1 ACYB-1 (Arabidopsis cytochrome b561 -1); carbon-monoxide oxygenase Encodes for cytochrome b561. similar to ACYB-2 (Arabidopsis cytochrome b561 -2), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT4G25570.1); similar to cytochrome b561 [Citrullus lanatus] (GB:BAE46407.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) 0.829268375318032 6.9479618222552 2.96757337237969e-05 0.000691682531985321 10.8896931632630 16.0973773444395 0.829268375318032 0.145019207843654 AT5G55100_at 7.78167738660776 7.14030852218269 8.52188806634559 8.26872919634424 8.3596272038395 8.02712541717054 6.58196195444836 5.9324268175336 7.65029124332997 7.6568164762757 8.18169483472012 8.12047098304517 7.62213418628232 8.14817264090427 8.01273001373807 8.38713170762423 8.28073196384177 8.39144280689262 7.88129009014253 0.144194501049359 0.152987433623760 0.154272985211626 0.146837741195071 0.145426134043330 0.150160801754931 0.159512217702915 0.160376670695694 0.155955565744081 0.142914505366119 0.150494170675204 0.151341472529121 0.151492005790649 0.151700324900405 0.142914505366119 0.142914505366119 0.153889030001035 0.154655453476537 0.153033679320311 5 5 - 22378629 22379146 22378886.182 22378328 22382006 - gene protein_coding_gene TRUE TRUE AT5G55100.1|AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to gene suppressor-of-white-apricot protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82206.1); similar to Os01g0698100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043973.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) 0.924423253140102 6.94722285441011 2.97036044384718e-05 0.000691682531985321 10.8887751700791 15.5129828599159 0.924423253140102 0.173736606260598 AT5G60920_at 9.82128792989404 10.1749862547014 10.1901589449345 10.2032287282342 10.5971427163104 10.7022312290484 10.4995516452023 10.6216284816086 10.3483894800699 10.6560405775141 12.0367958284494 11.6902207387599 11.6090525038918 11.6579306519227 11.7371087787186 11.3831112946636 11.2312557919885 11.5309299447532 10.5258067555180 0.092469782172417 0.0879962179221772 0.0884428170170212 0.0917845967469077 0.0879962179221772 0.0942089683654169 0.0879962179221772 0.0909708516592388 0.103036903437043 0.0887628172063635 0.0886435608206066 0.0892910104654813 0.0879992999641987 0.0879962179221772 0.0879962179221772 0.0879962179221772 0.0902347079143568 0.0902409784240923 0.0883778278381992 5 5|0 -|/ 24528736 24529443 24529096.1 24528422 24531355 - gene protein_coding_gene TRUE TRUE AT5G60920.1 COB (COBRA) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. Identical to Protein COBRA precursor (Cell expansion protein) (COB) [Arabidopsis Thaliana] (GB:Q94KT8;GB:O81811;GB:Q8LDZ4); similar to COBL4/IRX6 (COBRA-LIKE4), hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding [Arabidopsis thaliana] (TAIR:AT5G15630.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL3 [Arabidopsis thaliana] (TAIR:AT3G02210.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 [Arabidopsis thaliana] (TAIR:AT3G29810.1); similar to COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) (GB:Q6Z4G8); similar to hypothetical protein [Cleome spinosa] (GB:ABD96927.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13304.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918) 0.62164929036157 6.94719351071502 2.97047117388478e-05 0.000691682531985321 10.8887387158688 21.4110918059138 0.62164929036157 0.0672957219028948 AT5G41410_at 9.1892357911942 9.47975108913957 9.66427561802718 9.80123911511874 10.3253480414479 9.8374410998904 9.05220741171267 9.16563700190265 8.49911463129459 8.2607568668091 8.79801400325026 9.19269104424822 9.5278961014755 9.2645782513284 8.31956755563821 9.58354050766808 8.69039514748084 9.0604838524815 8.23100790922274 0.165917966015576 0.165692149679109 0.172727074807450 0.172068797397386 0.167297122818524 0.172677276491408 0.169834891529203 0.165910404218405 0.177561248672382 0.181872705864896 0.167346490518687 0.168053638839145 0.165692149679109 0.171713152904184 0.175975546404898 0.167116811946452 0.178342837498064 0.165692149679109 0.17830617879496 5 0|5 /|+ 16600583 16600897 16600742.1 16597272 16601236 + gene protein_coding_gene TRUE TRUE AT5G41410.1 BEL1 (BELL 1); DNA binding / transcription factor Homeodomain protein involved in ovule morphogenesis. similar to BLH4 (BLH4), DNA binding [Arabidopsis thaliana] (TAIR:AT2G23760.3); similar to bell-like homeodomain protein 3 [Lycopersicon esculentum] (GB:AAP47023.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain POX; (InterPro:IPR006563) 0.70486040865234 6.94394648968544 2.98275147255346e-05 0.000694169225530912 10.8847041303539 18.2568613679151 0.70486040865234 0.102975173034425 AT5G42980_at 13.0435294035502 13.2828901643347 13.9272619178030 13.8875127054129 13.7199514773840 13.6658048347121 13.3630641391815 13.5154704403418 13.1454532657681 13.5765068468108 14.2057013950835 13.9117750803497 14.1347807228300 13.9013379615138 13.7081914850451 14.0547988220565 14.109024911073 13.9518655848666 13.2177809033271 0.0678710853658147 0.068366006363581 0.0705600738427855 0.06744118187621 0.0681271157591183 0.0693346919040289 0.0671156993933814 0.0698170687664964 0.0740453046894003 0.069295326335932 0.0672688123718382 0.0671156993933814 0.069378091637097 0.0733401807912383 0.0696055444789555 0.0671156993933814 0.0688906185527587 0.0701944634353106 0.0694642853586549 5 5 + 17260010 17260918 17260577.182 17259835 17261140 + gene protein_coding_gene TRUE TRUE AT5G42980.1 ATTRX3 (thioredoxin H-type 3); thiol-disulfide exchange intermediate encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. Identical to Thioredoxin H-type 3 (TRX-H-3) (TRX3) [Arabidopsis Thaliana] (GB:Q42403); similar to ATTRX5 (thioredoxin H-type 5), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G45145.1); similar to thioredoxin h (GB:AAC49356.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Thioredoxin; (InterPro:IPR005746) 0.591415843513097 6.94213769274641 2.98961606590233e-05 0.000695393541870337 10.8824559636341 27.2059013856672 0.591415843513097 0.0504634975905169 AT5G11390_at 5.03101933406955 6.12773934309210 6.2654541492928 6.70485484208138 7.37890089505774 6.86512615456424 5.73097744358687 5.3377293892254 5.14282959695833 5.69901811036397 6.788425476991 6.88288247653214 6.12691228035334 7.16435918641075 6.35781104581605 6.54034083841476 6.04117348123684 6.30969922762867 5.656562122398 0.252169911290652 0.253110407921284 0.262257310573392 0.252980594676106 0.256127725030558 0.270318850440989 0.258647622397413 0.262683125813268 0.278778046295317 0.252416111043751 0.252773673119125 0.253087293469259 0.259611051797878 0.265633540304028 0.267939329993213 0.251437979325924 0.252654983140222 0.254497144371867 0.254777721604339 5 5 + 3635630 3636352 3636070.2 3633668 3636571 + gene protein_coding_gene TRUE TRUE AT5G11390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68910.1); similar to putative protein [Medicago truncatula] (GB:ABE91791.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 1.13684909559420 6.93953465870604 2.99952473785222e-05 0.000697324227300914 10.8792198220334 12.1931854163278 1.13684909559420 0.233108952906594 AT5G08060_at 8.5443832587049 8.6443716947377 9.23805926945563 9.40525970523539 9.12492643614504 9.16380752965874 8.550507960041 8.94004103566685 8.5514177604676 8.44438771415393 9.26439753012106 9.22565304420979 9.24728305364274 8.92378269827645 9.28764028566755 9.13059362762242 9.02180338868656 9.10880217731522 8.32110673549989 0.108203799535757 0.103503444510867 0.105620555508930 0.106836033717347 0.105267442241318 0.104141058218637 0.103503444510867 0.103503444510867 0.109111799437487 0.106247511482405 0.103808122942133 0.106792327102955 0.105944347547474 0.111323197901474 0.104253749512530 0.105707029343278 0.111943073920754 0.105909705753295 0.114387709200305 5 5 + 2580590 2580923 2580753.909 2580452 2582565 + gene protein_coding_gene TRUE TRUE AT5G08060.1 similar to Os01g0763300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044334.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87355.1) 0.637730493410836 6.93361588311528 3.02218685829096e-05 0.000702216153733663 10.8718579202428 17.7465272174056 0.637730493410836 0.0756708958408086 AT5G66360_at 6.76020507384746 6.74525661195549 7.3713556281928 8.01248889756228 7.68398240203515 7.27080590832289 6.25960889560512 6.35344118410734 6.49077040639432 6.3262185537077 6.5495567908012 7.12602141251768 7.02416585216086 6.91053459707711 6.68771596791643 7.01903389873953 6.88837521875653 6.82081214686827 6.2475982641398 0.266832385438882 0.259208448277919 0.272260267226345 0.266750279804622 0.260320467624473 0.272695971598048 0.257085138507559 0.259869784279626 0.267999175388461 0.253116231612469 0.259371088745225 0.250807695992979 0.252531932368663 0.269977207027939 0.257387760780735 0.250023933140554 0.267557236783412 0.251770862925646 0.250023933140554 5 5 + 26528343 26528849 26528606.364 26527455 26529028 + gene protein_coding_gene TRUE TRUE AT5G66360.1|AT5G66360.2 ribosomal RNA adenine dimethylase family protein similar to dimethyladenosine transferase, putative [Arabidopsis thaliana] (TAIR:AT2G47420.1); similar to hypothetical protein [Thellun (GB:ABB45840.1); contains InterPro domain Ribosomal RNA adenine methylase transferase; (InterPro:IPR001737); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain RRNA 16S rRNA dimethylase; (InterPro:IPR011530) 0.789222422586763 6.92627946669636 3.05053298693061e-05 0.000708422832424704 10.8627258451672 13.6737127720462 0.789222422586763 0.133015294660828 AT5G03900_at 8.30192661047942 8.30202070194713 9.02703403655136 8.90169101794988 9.60908593777472 8.96168635873868 8.99984924095654 8.67711628583585 8.2357361341878 8.11144126706092 9.23050175771552 9.05707161653505 9.05840399393398 9.01933408446338 9.05414142827788 9.35167419187103 8.98401470142147 9.00605980927307 7.97553389043486 0.143829113922143 0.137516832437006 0.145552580721179 0.144758141044924 0.137918696792528 0.144420376333549 0.139678184998264 0.144829599464226 0.145673977618993 0.140644499799732 0.143331037068631 0.137624451767106 0.133583316420381 0.146745842036607 0.133583316420381 0.138194541020457 0.148906980511909 0.145549805054746 0.143550237322955 5 5|0 +|/ 1050529 1051339 1051051.333 1048294 1052386 + gene protein_coding_gene TRUE TRUE AT5G03900.1|AT5G03900.2 Identical to Protein At5g03900 precursor [Arabidopsis Thaliana] (GB:Q8GW20;GB:Q8L632;GB:Q8LG15;GB:Q9FFM9;GB:Q9LZB9); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28426.1); similar to Os02g0533000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047028.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR000361) 0.771112947662078 6.92556868702914 3.05329443095152e-05 0.00070867746274306 10.8618406904223 17.448911588028 0.771112947662078 0.127050136191968 AT5G20590_at 4.4148809006996 4.60008835770645 5.34934708444402 5.30302173834017 5.68567033778194 5.23087846996552 5.03179951120733 5.38917803225447 4.02440630397435 4.84865719409387 6.12953550895332 6.23389396241253 5.76705530232503 5.54438822661195 5.54446866715025 6.16403943857972 4.99897703645975 5.12503821281645 5.53518164148724 0.248503557140392 0.227977605245203 0.236551047153871 0.233893307429778 0.227977605245203 0.236927298717415 0.227977605245203 0.230191144043689 0.264117792005791 0.234351579176756 0.236826810289044 0.232395938844691 0.23311518120266 0.239496958549262 0.231739414673992 0.227977605245203 0.250309669739999 0.245680646743867 0.235584845656893 5 5|0 +|/ 6965053 6965966 6965596.9 6963440 6966228 + gene protein_coding_gene TRUE TRUE AT5G20590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G60790.1); similar to lustrin A-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35858.1); similar to Os06g0659400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058264.1); similar to Os06g0207500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057100.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.70945943586388 6.92515613490571 3.05489846740914e-05 0.00070867746274306 10.8613268943601 10.3711945161827 0.70945943586388 0.105407607114551 AT5G49430_at 4.28029750331923 4.38043766701717 4.85471504854309 4.66295963665720 5.10906894151271 4.41044542032231 3.91479248418144 3.66649655218284 4.05462022070944 3.79324755233872 4.98331539495306 5.11612984415388 4.86039696653564 4.5880363900409 5.07540832336251 5.3369494438359 4.87389562861587 4.85067009589676 4.38472371984853 0.2055484273487 0.206845322825106 0.213440012129641 0.209969486390627 0.209017177978039 0.213612795375101 0.200594170546718 0.213734940486470 0.210237318468869 0.203512676982196 0.202881560658738 0.204789007564486 0.200594170546718 0.200594170546718 0.204144982461540 0.203362188591081 0.204811589235889 0.206818654122143 0.200594170546718 5 5|0 -|/ 20054580 20055271 20055020.556 20054564 20062680 - gene protein_coding_gene TRUE TRUE AT5G49430.1 transducin family protein / WD-40 repeat family protein similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT2G47410.1); similar to Os03g0306200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049887.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95528.1); similar to Bromodomain; WD40-like [Medicago truncatula] (GB:ABD32322.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.79093048668787 6.92399569937138 3.05941520059405e-05 0.000709345725412918 10.8598815484239 8.92896703599527 0.79093048668787 0.133658698127332 AT5G01360_at 2.23168975859996 2.07415384725759 3.65181587205040 3.57640741077079 2.27740549786863 2.94181592332959 2.15058415918204 2.43167844376474 2.74624275768233 2.83423450879914 2.78784820942177 2.89321589050576 3.23709393162490 3.37826487762975 3.19829916115619 3.14914975617706 5.66108835750956 3.18588101275079 2.75076177128770 0.223646826963686 0.226377032502043 0.217867582327778 0.221567232560396 0.223170652214855 0.237727114959185 0.217141489403162 0.224001112899379 0.227276361847467 0.223887830850887 0.226981317554483 0.223746480248882 0.216257306768568 0.217433651375915 0.216257306768568 0.216257306768568 0.236669769513055 0.220400164281472 0.227432519827333 5 5 - 147610 148176 147877.182 147481 149366 - gene protein_coding_gene TRUE TRUE AT5G01360.1|AT5G01360.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE79610.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.774555047072176 6.91878393474619 3.07978961968237e-05 0.000713688018395563 10.8533878378288 5.77366127852965 0.774555047072176 0.128452639125353 AT5G16520_at 5.4730145476293 5.6237312024779 6.7526919672175 6.75962272401987 7.27910393444908 6.58135139237759 6.33551518007366 5.84376487302125 6.59349187460999 5.59770260872998 7.17303539317276 6.66897991786538 6.7823631672928 6.98861504220658 6.44514594385879 6.78821480935129 5.8390095739165 6.72196552642734 5.86140634840316 0.225210647616493 0.227858957472494 0.232565981935567 0.216019906978720 0.223545840745829 0.229587071908133 0.21683789558197 0.219815488571175 0.225658236304281 0.219284642404582 0.223893401774394 0.221181681888457 0.226475353563496 0.234573875948414 0.219387714890470 0.225661388240186 0.247901169813059 0.216667975455606 0.221816158523702 5 5 - 5394743 5395615 5395113.727 5394611 5397458 - gene protein_coding_gene TRUE TRUE AT5G16520.1 similar to Os01g0100500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041736.1) 0.841284307447936 6.91473745691411 3.09570925283824e-05 0.000716993903978383 10.8483433870065 12.6778243688295 0.841284307447936 0.150013592949710 AT5G53490_at 10.2196471731867 10.2653402752768 10.4239506683670 10.4262781889727 10.9776474236468 10.5615779655308 10.5594555629106 10.4675427303086 10.4026723035943 10.2736588825690 11.6381716005534 11.5688288172708 11.2988494082742 11.4096723641288 11.5484694895960 11.3058703838012 10.7517682631809 11.3207416179598 10.2533845540943 0.108175527795525 0.108991590678977 0.116873484298272 0.111334841587714 0.106100770153181 0.11415264686568 0.105121573848431 0.106825954387612 0.127281418006422 0.115962541221898 0.105121573848431 0.106807204873916 0.105121573848431 0.112289381958291 0.105121573848431 0.105487407440464 0.107916095378004 0.105126737054015 0.113557375862011 5 5 - 21740716 21741449 21741158.727 21740533 21741868 - gene protein_coding_gene TRUE TRUE AT5G53490.1|AT5G53490.2 thylakoid lumenal 17.4 kDa protein, chloroplast thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Identical to Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) [Arabidopsis Thaliana] (GB:P81760;GB:Q93Y82); similar to thylakoid lumenal protein-related [Arabidopsis thaliana] (TAIR:AT1G12250.2); similar to Os10g0502000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064989.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL53570.1); contains InterPro domain Pentapeptide repeat; (InterPro:IPR001646) 0.632379186275877 6.91041836741563 3.11279914459777e-05 0.000720567157149226 10.8429565297236 21.3202808684491 0.632379186275877 0.0741625634972826 AT5G47390_at 9.17672380497434 9.16121126768297 9.68020003870111 9.78285883879568 10.0935110306980 10.1335044528415 9.32878028742762 9.4010101219658 9.71112538373038 9.64985893223993 10.1014638361822 10.1239960093860 10.1413062661209 10.0386631646527 10.0346658670619 10.2007016731064 10.2928645222384 10.1983848193362 9.68975505111933 0.0843174494350652 0.0835492666720074 0.0861720574812486 0.0819401235027136 0.0813858830692631 0.08412999464034 0.0810171356218278 0.0894784733410191 0.0912254806900149 0.0831253592996403 0.0831285415452835 0.0798126693745948 0.0828743633142275 0.0840356639622376 0.0804076251464715 0.0798126693745948 0.084665518406602 0.0829606206638587 0.0829869686799241 5 5 + 19245232 19245717 19245466.455 19244017 19246085 + gene protein_coding_gene TRUE TRUE AT5G47390.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G16350.1); similar to myb family transcription factor [Brassica oleracea] (GB:ABD65013.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.556756600238554 6.90879019937463 3.1192678494755e-05 0.000721679260459049 10.8409251584172 19.5072677597811 0.556756600238554 0.0229557457470058 AT5G11720_at 7.83518230957524 7.97252175098203 8.49430909895244 8.47369477515584 8.85128333709957 8.40043344448632 7.70945750275327 7.77100705686841 7.97248310206601 7.8089765390812 8.35522568467327 8.4934810963592 8.35781068562965 8.42066018410056 8.3620235522966 8.60746782711905 8.25013776609077 8.48679227104483 7.76784092633924 0.120119570045210 0.115122039809866 0.124532817256348 0.112601115207229 0.115906846260562 0.122264364029543 0.117730105188377 0.119120797852261 0.117830420699875 0.112390045527194 0.110850445466037 0.107767892095830 0.110196952870441 0.118343053892266 0.113631526429204 0.107767892095830 0.127083015110702 0.115885850446564 0.111072968685521 5 5 + 3779383 3779897 3779619.545 3776815 3780129 + gene protein_coding_gene TRUE TRUE AT5G11720.1 alpha-glucosidase 1 (AGLU1) similar to alpha-xylosidase, putative [Arabidopsis thaliana] (TAIR:AT3G45940.1); similar to ATXYL1/XYL1 (ALPHA-XYLOSIDASE 1), alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] (TAIR:AT1G68560.1); similar to Alpha-glucosidase precursor (Maltase) (GB:O04893); similar to Alpha-glucosidase precursor (Maltase) (GB:O04931); similar to high pI alpha-glucosidase [Hordeum vulgare] (GB:AAF76254.1); contains InterPro domain Glycoside hydrolase, family 31; (InterPro:IPR000322) 0.649910518232112 6.90553299694066 3.13225215668826e-05 0.000724036097954121 10.8368602062064 16.3217195291057 0.649910518232112 0.0823312988944363 AT5G25630_at 9.58534011203046 9.7656483341902 10.7855622865129 10.5584126457342 10.7811137459464 10.5756826011248 10.0915613268211 9.89740504651912 10.0362823256604 10.2614522671962 10.6944486062623 10.3510708959569 10.3659032182146 10.7557395487491 10.0788996479003 10.8171846444679 10.6469400423357 10.4616228011983 10.0464851797802 0.123832432526068 0.118994405208992 0.118202408411964 0.117713712272917 0.118478148164108 0.121416154258515 0.123510674271784 0.122785097453541 0.144881866838386 0.117564566333379 0.114958591564981 0.115558353451938 0.116093049526541 0.115728546867223 0.123979531082340 0.11719789216225 0.120245172919133 0.126307568499606 0.125164317057582 5 5 + 8948885 8949400 8949179 8947374 8949602 + gene protein_coding_gene TRUE TRUE AT5G25630.1 pentatricopeptide (PPR) repeat-containing protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G21222.1); similar to leaf protein [Ipomoea nil] (GB:BAA25906.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.62347018318138 6.90539725696388 3.13279452281900e-05 0.000724036097954121 10.8366907715601 20.5731988122838 0.62347018318138 0.0700832141801048 AT5G40470_at 5.44354023216177 6.06965162392751 6.81237960952316 7.43964203773125 7.8368894134067 6.958903764658 6.0773180268801 6.01370535695843 4.64758605981696 5.16417676140677 5.51029085127384 5.61179910747685 5.92249404985389 5.79598948546981 5.11766245692688 6.46276850375908 6.17149290644461 5.68799470162505 5.21547200457779 0.257616003511385 0.246126346220689 0.259876476474554 0.247036935604558 0.25070252964286 0.263959178090536 0.249295560240665 0.247564332263447 0.260742697133259 0.251502558800134 0.249409240695867 0.245966344717534 0.245389262432936 0.252046806456021 0.244191393356351 0.246694134047521 0.263493882456833 0.249015320333412 0.250735637016681 5 5 - 16225485 16226033 16225835.545 16225237 16227125 - gene protein_coding_gene TRUE TRUE AT5G40470.1 similar to F-box family protein (FBL4) [Arabidopsis thaliana] (TAIR:AT4G15475.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95013.1); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 1.06844156446720 6.90238487352289 3.14485692203659e-05 0.000726436674100759 10.8329299527037 11.9785736497163 1.06844156446720 0.216171460322884 AT5G10620_at 2.45900031557692 2.44408380527293 2.36535252642808 2.17660132887075 2.59901635093864 2.601615618456 2.83066627607073 2.60321862649744 2.48578042792970 3.18289163471201 4.35147416086190 5.19054709130155 3.50762234860906 3.89605507273506 5.49765301291665 4.07543476658227 3.60793623464927 4.06157284508125 3.17393616813633 0.246929868128132 0.248269657767796 0.262361175633059 0.259634183640506 0.256860231413909 0.257630649805681 0.249674673967857 0.255096282903300 0.252185866507963 0.251318247727842 0.252487521473099 0.255835487485398 0.246929868128132 0.254144062391535 0.260854289426933 0.257484515420948 0.259942419931562 0.249654389839484 0.254442293200081 5 5|0 -|/ 3355589 3356589 3355945.714 3355321 3356616 - gene protein_coding_gene TRUE TRUE AT5G10620.1 Identical to UPF0247 protein At5g10620 [Arabidopsis Thaliana] (GB:Q9LXB4); similar to OSJNBa0035M09.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE02132.2); similar to conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] (GB:CAJ73530.1); similar to Os04g0606900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053804.1); contains InterPro domain Protein of unknown function DUF163; (InterPro:IPR003742) 0.588702532492487 6.89655531332685 3.16834223180285e-05 0.000731471889249663 10.8256483627858 6.120480865273 0.588702532492487 0.0512162013294775 AT5G03540_at 9.680988529602 9.66723278725013 10.3188267894973 10.1620252147105 10.5085498153981 10.2143480780055 9.40355607589673 9.38933022956299 9.90774587110695 9.53193327550674 10.5197472649040 10.2489163909757 9.99684829803276 10.1887453389368 10.0787848048205 10.0526830912272 9.88866243728815 10.1305031826105 9.67567444836524 0.153598861071304 0.149251774982314 0.156083764021796 0.151159421876184 0.157868733254278 0.166704603244357 0.160462846366369 0.161259398009911 0.170902135871825 0.161216983154120 0.149251774982314 0.149251774982314 0.155446153740042 0.155624706978104 0.157533287808671 0.149251774982314 0.168938236075198 0.16117867726638 0.158600005500376 5 5|0 +|/ 893210 893666 893493.8 889565 894166 + gene protein_coding_gene TRUE TRUE AT5G03540.1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1); protein binding AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree similar to ATEXO70A2 (exocyst subunit EXO70 family protein A2), protein binding [Arabidopsis thaliana] (TAIR:AT5G52340.1); similar to Os11g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065801.1); similar to H0723C07.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86037.1); similar to Os04g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054320.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.599327027465683 6.89395206908804 3.17889070479499e-05 0.000733516620353224 10.8223951424435 19.8397217980366 0.599327027465683 0.0577942966805468 AT5G20935_at 7.97515433917756 7.96078449998166 8.35794940881992 8.33679812284907 8.91122899865882 8.66963361064913 8.36967472602937 8.37353624641081 8.11198708773072 8.5328511840922 9.07120712674676 9.15040181941305 9.00265846959202 8.83455763372446 9.17522349333331 9.29602239873366 8.84274499545539 8.44702822242052 8.03419481752211 0.121043716984444 0.120345673414933 0.121299466538139 0.130698246660014 0.116318856482207 0.125527748819649 0.118976609725322 0.123434540534161 0.142698996182614 0.116274148288929 0.119776884377192 0.123113171545087 0.118504228186851 0.125839662581026 0.117769580308663 0.119409492145543 0.13573424159206 0.12188979529459 0.126171785144619 5 5 + 7103499 7103856 7103615.364 7103472 7104025 + gene protein_coding_gene TRUE TRUE AT5G20935.1 similar to Os07g0164200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058958.1); similar to hypothetical protein Tery_2896 [Trichodesmium erythraeum IMS101] (GB:YP_722537.1) 0.575125619578384 6.89211116345488 3.18637295089134e-05 0.00073485203266505 10.8200940197431 16.9712574355932 0.575125619578384 0.042048050027721 AT5G38880_at 5.10291503159958 5.16814679318879 5.33851560558685 5.59008282794397 6.65181377041538 5.92149529798938 5.38335365828133 5.06215351743428 5.77082181966276 4.91820799527344 6.29604944558318 6.69128790070925 6.14825962252635 6.66804125357033 6.64281569020724 6.56886569741848 4.96745993511381 6.36482769472531 5.3442817269719 0.22973489570375 0.211512592032004 0.221245174352105 0.225996680354429 0.218015455365317 0.22548877688511 0.218320234614574 0.214414458497839 0.217490345001772 0.214765755813629 0.211512592032004 0.211612510488768 0.219631414354393 0.217557578988080 0.222465862327933 0.211512592032004 0.236428052951941 0.212122760726980 0.214256478232582 5 5|0 -|/ 15580873 15582440 15581877.1 15580536 15586424 - gene protein_coding_gene TRUE TRUE AT5G38880.1 similar to At5g38880 [Medicago truncatula] (GB:ABE87802.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33348.1) 0.822674174851806 6.88768497093778 3.2044405977759e-05 0.000738625967923964 10.8145593306920 11.3462536056138 0.822674174851806 0.145208832151016 AT5G05550_at 4.42217006676863 4.53283123846088 4.77593614558466 5.05587076789698 5.98227813443022 5.48094967741884 4.20104329221254 4.28957834035104 4.38458099403334 4.49159755499274 5.10726947280624 5.17353062757691 5.03039018798288 4.87372131644501 4.71135699764450 5.3655435965399 5.05400356259086 4.82148563528997 4.87811920955888 0.221977794043827 0.216583340824851 0.218840855515154 0.216467019415191 0.239155673982373 0.227320895350995 0.224662821223748 0.231595155162253 0.218739977519769 0.221203905257691 0.220578466948795 0.218505861380878 0.216467019415191 0.218843337044207 0.216467019415191 0.216467019415191 0.228476838187243 0.219378056059933 0.218205112526599 5 5 - 1639824 1640376 1640180.091 1639033 1640607 - gene protein_coding_gene TRUE TRUE AT5G05550.1|AT5G05550.2 transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G11100.1); similar to 6b-interacting protein 1 [Nicotiana tabacum] (GB:BAB83610.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) 0.69737485098281 6.88648876213851 3.20934240169297e-05 0.00073936276842455 10.8130630651604 9.6435465049594 0.69737485098281 0.102348040162612 AT5G10460_at 6.81218376356767 7.5043050057377 7.57112523643758 7.76756869890402 8.28924286496363 8.01489681559167 7.71707467209673 7.51040106790206 6.96981289982693 7.36665730840896 8.32596818224552 8.60535153461208 8.09646864959353 8.43561619547965 8.48852541313839 8.52503941537313 7.95973620799779 8.27110298621852 7.45446659598208 0.190071729564660 0.182945803741617 0.181560593283863 0.188733309739758 0.190141947834155 0.187748725570102 0.180394963217386 0.19334232105778 0.205646736471319 0.192147657548779 0.191772043896219 0.190448684575528 0.192328075301720 0.18595689675995 0.186690929171783 0.182968954607617 0.204529092738017 0.191349238670717 0.186325664161686 5 0|5 /|+ 3289184 3289799 3289500.333 3287782 3289949 + gene protein_coding_gene TRUE TRUE AT5G10460.1 haloacid dehalogenase-like hydrolase family protein similar to Haloacid dehalogenase-like hydrolase [Medicago truncatula] (GB:ABE83901.1); contains InterPro domain HAD-superfamily subfamily IIA hydrolase, hypothetical 3; (InterPro:IPR006356); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.799773874162264 6.88565468807708 3.2127650295839e-05 0.00073975819729322 10.8120196517887 15.4494106028943 0.799773874162264 0.137967181567005 AT5G44370_at 2.91349191430459 3.1831347498314 3.57172649606969 3.90866768730864 3.72694876693846 3.69839352182377 3.65806682949691 3.30348396059449 3.13648155608381 3.47361571296072 4.09978692827205 5.11744882450473 3.67685876953961 3.77194552559856 4.58294149107073 3.61264594299216 3.88382780755272 4.23362664170298 3.04770955171106 0.225124321972904 0.22058185979953 0.225274365756779 0.220544126468456 0.218274254817720 0.220061439442913 0.215464102256469 0.220215479771813 0.222303442319825 0.226380375986374 0.218625488911518 0.223670050527899 0.219930826955487 0.227112872346959 0.223498712575338 0.215464102256469 0.219309918529332 0.218540709559282 0.220374299910808 5 5 - 17892419 17892936 17892751.273 17892112 17894791 - gene protein_coding_gene TRUE TRUE AT5G44370.1 transporter-related similar to ANTR2 (anion transporter 2), organic anion transporter [Arabidopsis thaliana] (TAIR:AT4G00370.1); similar to Os12g0180100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066311.1); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91392.1); similar to Os11g0186800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067406.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.68250302781531 6.88163530014872 3.2293137653665e-05 0.000743173966328561 10.8069900745560 7.16631633162402 0.68250302781531 0.0967839886672784 AT5G61880_at 2.23441418380608 2.1975525254581 2.90363528136865 2.40716370091335 3.36431954143586 3.08007268586503 1.92000696934886 2.04999439273257 2.01426133097583 1.52316160157543 2.48830745319672 2.29360957598903 2.2898457023611 2.20981379059041 2.63355669896664 2.46594425791908 3.01472263534176 2.63998590112127 2.32127325609039 0.185861382128764 0.182318075809498 0.195069618006121 0.187860111262819 0.203818184622112 0.197421880345792 0.187016240136037 0.191085238820802 0.195394808545672 0.187662583409636 0.183374026689728 0.185051370383212 0.185410891259624 0.184771956717659 0.185725088801445 0.185662313500697 0.186470083710891 0.193258313476932 0.194833071633715 5 5|0 +|/ 24868153 24868690 24868406 24867483 24869002 + gene protein_coding_gene TRUE TRUE AT5G61880.1|AT5G61880.2 signaling molecule-related similar to TXR1 (THAXTOMIN A RESISTANT 1) [Arabidopsis thaliana] (TAIR:AT3G59280.1); similar to magmas-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87219.1); similar to Os10g0479600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064869.1); contains InterPro domain Protein Transporter, Pam16; (InterPro:IPR005341) 0.694940153473929 6.87857264085172 3.24198499170841e-05 0.000745694238955034 10.8031561372876 4.74833090085755 0.694940153473929 0.101725502499265 AT5G02680_at 2.63852897477706 2.64674698472030 3.77116008823802 3.27449237054706 3.69197946758531 3.06193435260092 2.74098105016791 2.67303407761331 2.57281463773561 2.53603411183213 3.03116101949659 3.29374940404722 2.91399532218572 3.58133018108834 3.05771177377215 3.34906027362099 3.28750938236034 3.70121211441702 2.23013983666219 0.200479634367127 0.197070637350134 0.203890090998981 0.202096682766511 0.198806844312049 0.202337048333526 0.195973444970064 0.203357279646109 0.205984707898962 0.197792443517341 0.196095452763451 0.195451323893349 0.196199134730161 0.205755501375760 0.201430499277344 0.199819890483557 0.202877485672109 0.195451323893349 0.202359204797474 5 5|0 +|/ 605806 606723 606354 605710 606763 + gene protein_coding_gene TRUE TRUE AT5G02680.1 oxidoreductase similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT1G10310.1); similar to Aminoacyl-tRNA synthetase, class Ia; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] (GB:ABE91897.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.802852726526709 6.87556729763616 3.25447109734761e-05 0.000748169281633054 10.7993926528835 5.92400502708966 0.802852726526709 0.139340709047763 AT5G54670_at 0.455646156256796 0.864718258933685 1.05878889037389 0.896379833212764 1.27408720255740 0.935372067443766 1.22219510037529 1.1258088341649 0.890629475948228 0.553966619144438 1.94862785635355 2.61575165236152 2.09408625566325 1.71893394505351 2.41799006979095 2.02856656055025 1.42392355693812 2.03439155263231 0.931552884225296 0.231533600526591 0.228463365036058 0.228463365036058 0.237060540977621 0.228463365036058 0.231247338737564 0.231740829088481 0.234620807451945 0.249820672962116 0.228463365036058 0.235846309446442 0.241748912864864 0.228463365036058 0.230104293659174 0.228890008303274 0.228463365036058 0.238135855971478 0.228463365036058 0.229520611420624 5 5|0 +|/ 22230161 22231010 22230577.125 22226698 22231360 + gene protein_coding_gene TRUE TRUE AT5G54670.1 ATK3 (ARABIDOPSIS THALIANA KINESIN 3); microtubule motor Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. Identical to Kinesin-3 (Kinesin-like protein C) (ATK3) [Arabidopsis Thaliana] (GB:P46875;GB:Q9FH38); similar to ATK5 (Arabidopsis thaliana kinesin 5), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G05190.1); similar to ATK1 (ARABIDOPSIS THALIANA KINESIN 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G21270.1); similar to ATK2 (ARABIDOPSIS THALIANA KINESIN 2), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G27180.1); similar to H0323C08.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86215.1); similar to Kinesin, motor re (GB:ABE93171.1); similar to Os04g0629700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053970.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) 0.683649591179784 6.87362715940182 3.26255913904558e-05 0.000749631167400883 10.7969624040559 2.39279133838510 0.683649591179784 0.0975474221507836 AT5G42030_at 8.73316097021765 8.90905331779382 9.76288526124213 9.89515204608533 10.2999360141158 9.65835286223076 9.66033256976557 9.1929857105002 9.04333558955936 9.26379941430397 9.99297756757904 10.1958781930282 9.95305821166488 9.88787175802023 10.0920277789409 10.0912552783075 9.53725196723892 10.2811800425007 9.17000323410207 0.141986883318686 0.132498814492230 0.135602028464840 0.136127499540576 0.127285719971991 0.138333323520762 0.127285719971991 0.132482271246369 0.149104472928438 0.13353324562601 0.131383438933913 0.127285719971991 0.127285719971991 0.137387358375877 0.136312872921948 0.128284976304442 0.149190214575188 0.131362027813964 0.132013703054895 5 5|0 -|/ 16829031 16829816 16829445.7 16828612 16830411 - gene protein_coding_gene TRUE TRUE AT5G42030.1 ABIL4 (ABL INTERACTOR-LIKE PROTEIN 4) Identical to Protein ABIL4 (Abl interactor-like protein 4) (AtABIL4) (ABIL4) [Arabidopsis Thaliana] (GB:Q9FHY1;GB:Q8LG96); similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) [Arabidopsis thaliana] (TAIR:AT5G24310.1); similar to Probable protein ABIL3 (Abl interactor-like protein 3) (GB:Q5NB83); similar to Os01g0236400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042529.1); similar to Os01g0551800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043308.1) 0.812544962093724 6.87305785419744 3.26493655853487e-05 0.000749780082206352 10.7962491813887 19.0954741834848 0.812544962093724 0.142544386832487 AT5G50850_at 10.2717456904918 10.2701504773642 10.9499708264094 10.9123991254280 10.7785642676752 10.6302697761509 10.5650056076382 10.3717191165905 10.1850867343461 10.1560398764035 10.8842503519073 10.8977466150467 10.8208098066247 10.7895829823915 10.8339227669925 10.8364140382822 10.6731230466186 11.0234090287064 10.0927899751264 0.104049174515671 0.100117322811665 0.100975104292250 0.101009924906441 0.104621578411049 0.101713449284337 0.103840977748142 0.105797327860370 0.102692871054537 0.101683741016339 0.100769236124703 0.101588698813427 0.100311119029080 0.104573000970888 0.102137033249551 0.101016489390666 0.103315194741028 0.0992496673914705 0.0990897492204796 5 5|0 +|/ 20708978 20710154 20709522.4 20706616 20710511 + gene protein_coding_gene TRUE TRUE AT5G50850.1 pyruvate dehydrogenase E1 component beta subunit, mitochondrial / PDHE1-B (PDH2) Identical to Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) (PDH2) [Arabidopsis Thaliana] (GB:Q38799;GB:Q9LSM8); similar to PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA), pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] (TAIR:AT1G30120.1); similar to pyruvate dehydrogenase E1 beta subunit (GB:AAA52225.1); contains InterPro domain Transketolase, C-terminal; (InterPro:IPR005476); contains InterPro domain Transketolase, C-terminal-like; (InterPro:IPR009014); contains InterPro domain Transketolase, central region; (InterPro:IPR005475) 0.574207121753621 6.87145835454496 3.27162605196096e-05 0.000750918566267347 10.7942450894364 21.0885012067335 0.574207121753621 0.0426589754764709 AT5G52190_at 8.08000561397122 8.1352071615899 8.3647932110206 8.68750064358314 9.3582405071288 8.84575264930078 8.12780418246403 8.5034256232321 7.46952129664102 7.43658016204734 8.20482928164535 8.10171681477936 8.28311943674127 8.16407233895947 8.9536727861014 8.36277877161749 8.36743424728478 8.42380581415964 7.44448759864096 0.191678126820372 0.181149102798332 0.190777427313827 0.186560542269080 0.189401782648987 0.205362041294062 0.185896600241417 0.184084498607605 0.192914975811628 0.191350726785524 0.187752433216069 0.181149102798332 0.188080692893981 0.193969708397024 0.183278462910494 0.183906743912467 0.197529103914264 0.196770726952654 0.187691028144971 5 5 - 21219063 21219616 21219389.364 21218956 21219769 - gene protein_coding_gene TRUE TRUE AT5G52190.1 sugar isomerase (SIS) domain-containing protein similar to Sugar isomerase (SIS) [Rhodospirillum rubrum ATCC 11170] (GB:YP_426455.1); similar to Os04g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053590.1); similar to OSIGBa0103M18.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66854.1); contains InterPro domain Sugar isomerase (SIS); (InterPro:IPR001347) 0.754971720706004 6.86921925262213 3.28101529738179e-05 0.000752675177139757 10.7914389964143 16.4167787184634 0.754971720706004 0.123697479852343 AT5G51040_at 9.49065293730601 9.45375467659396 10.3324421063136 10.4102193551076 10.3002406099466 9.97166366910177 9.46955001209968 9.78080595864545 9.01343950852697 9.28562520760186 9.49447902599968 9.5871888545648 9.59752448587907 9.62325216673022 9.36341708705667 9.77260145655024 9.9351196618764 9.750511595084 8.89443540203252 0.105191495342740 0.0995739842953844 0.104427003510686 0.105511567850692 0.108504214895732 0.105610131809894 0.104127119112820 0.0995739842953844 0.113871355716945 0.108203785338766 0.104416717058684 0.102687234040958 0.103758764460218 0.111848914583001 0.105892021951500 0.0995739842953844 0.105070454578779 0.105844592562703 0.115229964224595 5 5 + 20767936 20768946 20768461.182 20767886 20769250 + gene protein_coding_gene TRUE TRUE AT5G51040.1|AT5G51040.2 similar to Protein of unknown function DUF339 [Medicago truncatula] (GB:ABE80212.1); contains InterPro domain Protein of unknown function DUF339; (InterPro:IPR005631) 0.640481145643321 6.86745107252665 3.28845030746692e-05 0.000753981859520307 10.7892225687469 19.2536720811917 0.640481145643321 0.0797280420147964 AT5G07900_at 4.28992639088224 4.49970609453712 4.95217911314175 4.55643929955996 5.28980725572297 5.13149482533866 4.82225033127061 4.70224354792441 3.83766992460035 4.13509583719759 4.66688024202119 5.57489905455314 4.87939374234708 4.83382709732488 5.83608344034731 5.08077656141956 4.62632013522214 4.7048131500591 4.41272444490393 0.219829027028198 0.222123827297040 0.211646116621818 0.216581638933846 0.216937411030375 0.22565509928036 0.213032137750697 0.226464848771531 0.215463791494287 0.217748640218904 0.216295608741140 0.218592145258006 0.215059917250533 0.216823771442175 0.211935381024100 0.215494320056644 0.227891989220852 0.219351243961144 0.214947919084617 5 5 + 2520834 2521382 2521089.727 2520170 2521547 + gene protein_coding_gene TRUE TRUE AT5G07900.1 mitochondrial transcription termination factor family protein / mTERF family protein similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G21150.1); similar to Os05g0403400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055498.1); similar to mitochondrial transcription termination factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37286.1); similar to Os07g0423000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059486.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.650412987315875 6.8509705306863 3.35862752625725e-05 0.000769437227969369 10.7685426521880 9.35744131403676 0.650412987315875 0.0847936027292204 AT5G24650_at 9.02830251873803 9.365231065887 10.0197045547233 10.0575261529868 10.4109002856009 9.89604164636175 9.8648275670265 9.6102729873986 8.91213835794047 9.25509635573477 9.93474181114867 9.95674148186729 9.85812741245987 9.74762950352165 10.1061820473311 9.94807174438458 9.5987098493199 9.8747487348836 8.97826435770814 0.0966539892483746 0.0966951773319195 0.0996564565877697 0.0977569243939851 0.096281424075229 0.103559775260240 0.096281424075229 0.0995632006694935 0.108481971707010 0.096307103853162 0.0983736092662554 0.096281424075229 0.100420918321242 0.107374970815768 0.0965723804655115 0.0969112257031959 0.102660938500333 0.100988238472349 0.101258030274194 5 5|0 +|/ 8437309 8438671 8437879 8437088 8439107 + gene protein_coding_gene TRUE TRUE AT5G24650.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] (TAIR:AT3G49560.1); similar to H0502B11.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66528.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397); contains InterPro domain Sterile alpha motif SAM; (InterPro:IPR001660); contains InterPro domain Sterile alpha motif homology; (InterPro:IPR010993) 0.729252003904549 6.85078948552748 3.35940733938444e-05 0.000769437227969369 10.7683152602196 19.2449102291282 0.729252003904549 0.115419647298234 AT5G04490_at 10.0274259301428 10.0307749238426 10.8216480238297 10.743881416088 11.1570461544994 10.8554519398149 10.4000870795254 10.2582767589476 10.7250780977965 10.4854167567335 11.2548367384306 11.0793781955682 10.9801943595471 11.0309614503689 10.7850533049155 11.0631279013955 10.5698080521188 11.0213416601675 10.2676972706042 0.0899211531127977 0.0878897707664523 0.0913665641935032 0.0875035881541395 0.0867020778274339 0.0976924940665744 0.0846467209695204 0.0912931804241138 0.102123378084943 0.0872813785476581 0.085662071324894 0.0842132113543847 0.0842279414661852 0.0925265042427286 0.0872814293955673 0.0842132113543847 0.113038674091392 0.0898341264896205 0.0899510678070318 5 5|0 +|/ 1280600 1281526 1281229.222 1279761 1281670 + gene protein_coding_gene TRUE TRUE AT5G04490.1 VTE5 (VITAMIN E PATHWAY GENE5); phosphatidate cytidylyltransferase/ phytol kinase Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis. Identical to Phytol kinase 1, chloroplast precursor (EC 2.7.-.-) (Vitamin E pathway gene 5 protein) (VTE5) [Arabidopsis Thaliana] (GB:Q9LZ76;GB:Q84WC0;GB:Q8LF61); similar to phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G58560.1); similar to Probable phytol kinase 1, chloroplast precursor (GB:Q2N2K1); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) 0.597861354939637 6.84845235544763 3.36949153013418e-05 0.000771339437401286 10.7653794147169 21.2697332364323 0.597861354939637 0.0592261980036549 AT5G03490_at 5.9834035721105 6.42048908994668 7.25518670737599 7.49180327961847 7.2794348124715 6.66220008826343 6.454183315912 6.63050291593692 6.90316651726711 6.6674875145381 7.43544607172186 7.01640514599737 7.70310133239848 7.77426940538549 7.17075710793777 8.03269075126392 7.50264265457851 7.52599674067858 6.57291915040175 0.223907170768333 0.209420344603683 0.207476486657117 0.219923345637421 0.224545454144472 0.248214922808965 0.226643528240245 0.207476486657117 0.215335587721181 0.2214538403986 0.212418677209688 0.218024901265825 0.207476486657117 0.211597837643693 0.224127636895165 0.208528406665027 0.234443985979861 0.211945086081560 0.215313053272077 5 5 + 872347 872853 872602.273 871459 873056 + gene protein_coding_gene TRUE TRUE AT5G03490.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G51210.1); similar to putative glycosyltransferase [Solanum aculeatissimum] (GB:BAD89044.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 0.802825377816044 6.84477202533107 3.38543739866542e-05 0.000774304232960609 10.7607546941835 13.8894944953616 0.802825377816044 0.140494219467528 AT5G13850_at 7.66373701088779 7.51862318568199 8.1117555187606 8.17661041242099 7.99292001684104 8.02230381743569 7.58253885774956 7.73516763092194 7.61778718221799 7.42137551604624 8.08910775205264 8.24132323554213 8.24822952683469 8.25721134008393 8.44001444262106 7.90394373836668 7.86847772961698 8.1695222448021 7.37016621203045 0.120334563325468 0.117049642230468 0.119811416484281 0.114747043568114 0.127840364213173 0.128990457753138 0.121707776309342 0.120859316207047 0.133510135847385 0.121229666446533 0.119390945074740 0.122255197039426 0.121129721901959 0.129495387178455 0.122454623660190 0.117478082335863 0.127685780803807 0.125838887067448 0.122221361251153 5 5|0 +|/ 4471372 4472487 4472189.7 4471280 4472857 + gene protein_coding_gene TRUE TRUE AT5G13850.1 nascent polypeptide-associated complex (NAC) domain-containing protein Identical to Nascent polypeptide-associated complex subunit alpha-like protein 3 (NAC-alpha-like protein 3) (Alpha-NAC-like protein 3) [Arabidopsis Thaliana] (GB:Q6ICZ8;GB:Q9FFY7); similar to nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative [Arabidopsis thaliana] (TAIR:AT3G12390.1); similar to Nascent polypeptide-associated complex NAC; UBA-like [Medicago truncatula] (GB:ABD32881.1); contains InterPro domain Nascent polypeptide-associated complex NAC; (InterPro:IPR002715) 0.566666608931364 6.84444485924233 3.38685884408106e-05 0.000774304232960609 10.7603434821382 15.6614595836732 0.566666608931364 0.0384723246986248 AT5G04280_at 8.12467142343289 7.8943793084149 8.65927500032497 8.52816796938766 8.32332498845295 8.37869987928331 7.92445473628035 7.88071283650887 7.42621855426436 7.95614981649893 8.55878105559736 8.40399348620221 8.25483775142842 8.48195562670686 8.48750149273833 8.55293325750524 8.3970931651346 8.32852258322007 7.99465348991918 0.103650339513068 0.101765831344483 0.0993316577415242 0.103287949938070 0.0974482559741248 0.109609049707998 0.0974299819808351 0.103363505874515 0.115144668728974 0.0996644219768036 0.104239076776004 0.0989454478023414 0.099504736244537 0.100755237133961 0.102505063396574 0.0975227189555073 0.0985569205498879 0.105793945408830 0.0984957377527071 5 5 + 1194879 1195331 1195096.091 1192275 1195663 + gene protein_coding_gene TRUE TRUE AT5G04280.1 glycine-rich RNA-binding protein similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.2); similar to Os07g0187300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059075.1); similar to RNA-binding protein [Triticum aestivum] (GB:AAK01176.1); similar to Os03g0681900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050909.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.578587032646058 6.84422821534373 3.38780045471686e-05 0.000774304232960609 10.7600711760079 16.3269822290328 0.578587032646058 0.0474571437013509 AT5G06770_at 4.50012492367784 4.33730491306631 5.35096521604217 5.134382315254 6.22573942773428 5.48248617963183 5.59165579996487 4.7252108466696 5.07870018734294 4.28538187491748 5.68261837136948 5.88803678221431 5.37110658067115 5.9796618295141 6.21490664509352 5.6171789697412 5.67503888355568 5.58841153908252 4.09926723276204 0.192801753744937 0.198406371040214 0.201568289649573 0.196081546433057 0.195289188576326 0.21964553695301 0.196084216320693 0.190245894847885 0.199647951328236 0.189402408497695 0.190547254897802 0.189402408497695 0.191642137742445 0.197641858086236 0.196381418432653 0.190106787124742 0.193579835355166 0.190531309749243 0.200146796178694 5 0|5 /|- 2090940 2091478 2091302.8 2090704 2092951 - gene protein_coding_gene TRUE TRUE AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein similar to KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] (TAIR:AT3G12130.1); similar to KH domain-containing protein / zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35424.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain KH, type 1; (InterPro:IPR004088) 1.01207800781767 6.84212830764057 3.39694200010406e-05 0.000775984534912292 10.7574313926240 10.2884352270031 1.01207800781767 0.203040454852411 AT5G55760_at 5.12033455992075 5.38764673283541 6.12359514368261 6.16772447001664 6.22065362785327 6.14702254663567 5.78947067553185 5.22820071683114 5.06905377400348 5.05189716491372 5.89979756068648 5.74321577265236 5.51770294175923 5.73569789658669 5.82522042883107 5.92350211520409 5.95795468853176 5.78885358932982 5.36932987072625 0.242259192642941 0.242259192642941 0.248078744162515 0.251162165011986 0.245450260538010 0.256702614959264 0.244161374754248 0.24311848885436 0.249641359920889 0.246312493125977 0.246174619151987 0.24326299452216 0.246775321660707 0.247959656049827 0.244984727513609 0.243157102343834 0.260123170803387 0.243248138618824 0.242259192642941 5 5 + 22587160 22587865 22587532.909 22584448 22588189 + gene protein_coding_gene TRUE TRUE AT5G55760.1 SRT1 (SIRTUIN 1); DNA binding similar to SRT2 [Arabidopsis thaliana] (TAIR:AT5G09230.7); similar to SIR2-like histone deacetylase [Zea mays] (GB:AAK67144.1); similar to Os04g0271000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052343.1); contains InterPro domain Silent information regulator protein Sir2; (InterPro:IPR003000) 0.709450981708566 6.84128735741443 3.40061035347077e-05 0.000776413450372143 10.7563740617928 11.2542910895362 0.709450981708566 0.108604548632879 AT5G51400_at 9.34061064466286 9.66086090426385 9.69324026251766 9.89188096312662 10.4161034511108 10.0943074410257 9.35175661962618 9.32196200781624 9.33304660613559 8.78871339626461 9.91290247558254 9.78299059201318 9.85065822452426 9.7361340590263 9.6758402959309 9.38851092656037 9.6492839722323 9.75866368000047 8.94075678931566 0.115420344003956 0.109300730919570 0.113068745977082 0.105396626800283 0.110385391523758 0.108539206543852 0.112301485444693 0.111319650014383 0.114777031499732 0.123025457005028 0.105299692246495 0.103057954303485 0.10608260505901 0.110628373894972 0.112393355777406 0.107340144120614 0.115059992799237 0.108420179392970 0.114287191681692 5 5|0 -|/ 20896026 20896782 20896410.3 20895839 20897360 - gene protein_coding_gene TRUE TRUE AT5G51400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45010.1); similar to unknown [Hordeum vulgare subsp. vulgare] (GB:AAS58477.1); contains InterPro domain Protein of unknown function Cys-rich; (InterPro:IPR006461) 0.651809791507372 6.83835048128916 3.41345492037841e-05 0.000778935887223641 10.7526807209166 19.0914462661716 0.651809791507372 0.0859123159870904 AT5G62030_at 5.22820685585883 5.00093962973603 5.55874046045115 5.62654395397826 5.87965820805986 5.69381516395844 5.37562410405016 4.74029401864984 4.54766592583491 4.31028389205176 5.35279820344817 5.33766297339489 5.64401670314818 5.53438188585492 4.9825414091843 5.59841238692341 5.54208801993877 5.09282505179623 4.63738485152661 0.167721746534208 0.163669253891160 0.169463089889998 0.165299925520192 0.167646807781039 0.170717074909085 0.162226872652846 0.163699240141592 0.178134394392741 0.179403937435920 0.161326368857069 0.162762155594146 0.16305435381438 0.161111613169312 0.167316991581806 0.159305146130992 0.169578472780474 0.164400105973036 0.169466992886734 5 5 + 24937082 24937584 24937319.182 24935705 24938102 + gene protein_coding_gene TRUE TRUE AT5G62030.1 diphthamide synthesis DPH2 family protein similar to diphthamide synthesis DPH2 family protein [Arabidopsis thaliana] (TAIR:AT3G59630.1); similar to Tuftelin-interacting protein TIP39, contains G-patch domain (ISS) [Ostreococcus tauri] (GB:CAL57495.1); similar to Os02g0815600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048504.1); contains InterPro domain Diphthamide synthesis DPH2 protein; (InterPro:IPR002728); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) 0.745284616972447 6.83410664848393 3.43210780148178e-05 0.000782780405628838 10.747341608165 10.3299956588506 0.745284616972447 0.121684585149416 AT5G06960_at 7.42491244777115 7.15542029724902 8.18081864184128 8.28025719685684 8.4611944419851 7.8346472614889 6.93428927062627 6.61834651374225 5.30650816191894 6.11898534431925 5.84142429457319 5.99430878104823 6.06812270576158 6.03883422890462 5.22825888924762 6.0886379035706 6.87741470142492 6.36866052944673 5.59860106696914 0.196834818397953 0.193105179445101 0.194746892775568 0.187274726397605 0.191738457833438 0.195151448335829 0.196758821071052 0.190152007249481 0.201685636135052 0.195539974355047 0.184626292600781 0.185414400469103 0.186508736741781 0.190219837749294 0.198834556846899 0.183455686892689 0.190722999346074 0.189157992227903 0.192539042469844 5 5 + 2156643 2157365 2157041.182 2154781 2157647 + gene protein_coding_gene TRUE TRUE AT5G06960.1|AT5G06960.2 OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / transcription factor Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element. Identical to Transcription factor TGA5 (Ocs element-binding factor 5) (OBF5) (AtbZIP26) (TGA5) [Arabidopsis Thaliana] (GB:Q39163;GB:Q9FL50); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to bZIP transcription factor bZIP99 [Glycine max] (GB:ABI34658.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.772248408186968 6.82478860621118 3.47344908777309e-05 0.000791792834782216 10.7356096665652 13.4801887316032 0.772248408186968 0.131213241528879 AT5G55480_at 3.26045089738499 3.38465505180184 2.66839993197928 2.51049940223616 3.00739633390568 3.50451383491652 3.50434291558937 4.15531895800891 4.22591886910984 3.756689581544 7.0976060250374 7.71824060661272 6.22478075991976 5.58363701129573 7.5198642429325 6.0488806938695 4.69514713711279 6.07152441616099 4.26648084840195 0.236926536116864 0.235917671372912 0.237370992609555 0.236000122390825 0.229883140324128 0.229946109632547 0.229883140324128 0.231448177906201 0.231397614767477 0.23184793449711 0.237109045953766 0.232883657257769 0.235218555413175 0.243006171770355 0.233909529905591 0.233380291845016 0.23605465156883 0.244255844707810 0.233559172636622 5 5|0 +|/ 22494363 22494964 22494690.7 22491456 22495358 + gene protein_coding_gene TRUE TRUE AT5G55480.1 glycerophosphoryl diester phosphodiesterase family protein Identical to Probable glycerophosphoryl diester phosphodiesterase 1 precursor (EC 3.1.4.46) (GPDL1) [Arabidopsis Thaliana] (GB:Q9FJ62;GB:Q5XEZ7); similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66970.1); similar to protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66980.1); similar to MRH5/SHV3 (morphogenesis of root hair 5), glycerophosphodiester phosphodiesterase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26690.1); similar to putative glycerophosphoryl diester phosphodiesterase family protein [Nicotiana tabacum] (GB:BAE53680.1); similar to B0806H07.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67272.1); similar to Os04g0472300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053060.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) 0.816720382664437 6.81844253578378 3.5019110948258e-05 0.000797861428613299 10.7276124979938 8.47594210471264 0.816720382664437 0.145947255822692 AT5G19540_at 10.7812331567773 10.649590404151 11.4079330389522 11.3163120995005 11.5512327186626 11.3488559831012 11.0634486415528 10.7292520350883 10.5141424266280 10.7153593558682 11.2383519969497 10.9806166802705 11.2539120051725 11.3108686118478 11.0959416859971 11.1416765055288 11.2844776305375 11.3276926715219 10.4536568041511 0.0693648079056396 0.0686192146728731 0.0740941914222586 0.071991804012892 0.071608093389032 0.0748369577271873 0.0695070130064394 0.0690071113913712 0.0777625702199243 0.0732959916326155 0.0688647755063445 0.0680468236667193 0.0681255276411804 0.06990192926712 0.0720295499619934 0.0685546871387616 0.0726348401324823 0.0675240195776966 0.0717382609594181 5 5|0 +|/ 6596917 6597652 6597303.1 6595704 6597891 + gene protein_coding_gene TRUE TRUE AT5G19540.1 similar to Os08g0387500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061714.1); similar to unknown [Striga asiatica] (GB:ABE66393.1) 0.621670880962119 6.81781194521396 3.50475295314052e-05 0.00079808952132461 10.7268175278844 21.9886048025702 0.621670880962119 0.0730872613790382 AT5G43830_at 10.7251855954600 10.6896519307069 11.0973670407234 10.9261210306653 11.1874279057578 10.8575111079177 10.7066132139976 10.5805826815385 10.5800886937433 10.6021210624378 11.4273256679558 11.5359090965162 11.3477348080109 11.4708941500469 11.6067654212939 11.426808442643 11.3761592358921 11.3522691990792 10.5046823700494 0.073745336369259 0.0696457960335572 0.0716884659636916 0.0724032073568175 0.071729443640549 0.0699110922147024 0.0698993506222297 0.0711123239123788 0.0817266049334208 0.0708086524875439 0.0733324013200351 0.0706306149672944 0.069497450168144 0.071329926163474 0.0758460836474957 0.0705769918405697 0.0731476683364658 0.069497450168144 0.0708171346133792 5 5|0 -|/ 17639900 17641280 17640435.6 17639563 17641556 - gene protein_coding_gene TRUE TRUE AT5G43830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22850.1); similar to aluminum-induced protein-like protein [Thellun (GB:AAM19711.1); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.611142146554957 6.81007524700811 3.53982226363888e-05 0.000805652239739434 10.7170594286152 21.8489478773908 0.611142146554957 0.068201241699968 AT5G28740_at 7.2188579008232 7.10459604381599 7.67377084965268 8.00386138173697 7.53058813382768 7.50512235793517 7.18591972684345 7.29735210259992 6.98048616877913 6.55653913739059 7.47673653858171 7.84367879006212 7.0960376049253 7.33984213887593 7.92240031697073 7.61926283183624 7.36585768028541 7.59607961653972 6.87778193024744 0.161912185196324 0.172940352927324 0.165407897485768 0.162317606659482 0.164827027879835 0.169595785922004 0.164949803091407 0.159387460377426 0.172806445694334 0.167581659527079 0.159691979451485 0.161754473550497 0.162285477463378 0.168772346544404 0.160773439751256 0.161583503098805 0.162343539141373 0.156785384886541 0.156956324081052 5 5|0 +|/ 10783094 10783711 10783338.333 10780778 10783915 + gene protein_coding_gene TRUE TRUE AT5G28740.1 transcription-coupled DNA repair protein-related similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT5G45990.1); similar to XPA binding protein 2 [Danio rerio] (GB:NP_955466.1); similar to hypothetical protein LOC555321 [Danio rerio] (GB:NP_001038248.1); similar to Xab2 protein [Danio rerio] (GB:AAH56771.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.602102715777369 6.80686321662866 3.55449263174837e-05 0.00080856672418409 10.7130056591309 14.6087199047704 0.602102715777369 0.0636034658147344 AT5G09995_at 3.43631508277609 3.43640636117024 3.49198810987529 3.73061074044246 4.64819605072266 3.67692770228608 3.69976017596483 3.54397116903650 3.69519884620731 3.44132212965129 5.4711653869614 5.74984484942765 4.32791097759993 4.41057685802936 6.09925027173364 4.45922390750237 4.171376845589 5.15612859032317 3.41625038560242 0.218781198751664 0.208988031479643 0.212971802240641 0.213465205149614 0.212896543756235 0.215496388595317 0.21236321786915 0.214947661305635 0.210363131963211 0.214243246989348 0.208146713159259 0.212034447427140 0.215237262459686 0.210588805168576 0.230088810370743 0.208146713159259 0.224602533895398 0.213604736244236 0.209963634811862 5 5|0 -|/ 3125489 3126252 3125991.4 3125039 3126379 - gene protein_coding_gene TRUE TRUE AT5G09995.1|AT5G09995.2|AT5G09995.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08530.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89404.1) 0.910455855335093 6.80606397042633 3.55815319535314e-05 0.000808974983673853 10.7119967342366 7.95715950639234 0.910455855335093 0.175168012029309 AT5G50370_at 5.60123195552989 5.27269569327631 6.1465449951805 5.64807949208032 5.04223812877146 5.31273820458444 5.70660114837676 5.9451515112118 4.82707137377193 5.10122471153301 6.38330767840159 7.42997078086595 5.81229382238805 6.59839689428214 7.27699064788617 6.03578903291931 5.77628469540288 6.66971819453636 4.84903141860065 0.204010866017533 0.195894744806398 0.195894744806398 0.200038047677158 0.196834414057196 0.198219152089577 0.204033597989786 0.205396128444808 0.206883982084299 0.198243876980368 0.195894744806398 0.197755685159119 0.196897317315159 0.202642051658914 0.198067064087673 0.201047808805007 0.200606121320856 0.197350062598484 0.204393666202596 5 5 - 20526650 20527415 20527094.182 20526385 20527929 - gene protein_coding_gene TRUE TRUE AT5G50370.1 adenylate kinase, putative Identical to Adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP transphosphorylase 2) (ADK2) [Arabidopsis Thaliana] (GB:Q9FK35;GB:Q8LD90); similar to ADK1 (ADENYLATE KINASE 1), adenylate kinase [Arabidopsis thaliana] (TAIR:AT5G63400.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) 0.739024130877801 6.80248669638797 3.57458693884249e-05 0.000812285379191377 10.7074798566583 11.2962200426117 0.739024130877801 0.120702433590040 AT5G44160_at 2.55934400887658 2.73963914497989 2.78751998366437 3.20087738865681 3.297523064666 3.29392087264133 2.44345253015045 2.42171350932325 2.64506707095386 1.83879719652360 2.52427496406777 2.32263202857481 2.77522908920826 2.89332613988384 3.00261614953349 3.13968047304928 2.81748993035511 3.48353808051252 2.15220767827614 0.207970461759635 0.205752437207179 0.2161807044486 0.204598443949381 0.204655437218286 0.213804351395682 0.205260400651872 0.202366558480081 0.211471155270093 0.212764371615919 0.211398954510924 0.206659344772897 0.207782025459900 0.205592904522273 0.202366558480081 0.202689602315795 0.209399095964469 0.206609833836451 0.205610886904719 5 5 + 17792190 17792697 17792396.818 17790168 17792913 + gene protein_coding_gene TRUE TRUE AT5G44160.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G03840.1); similar to Os01g0242200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042553.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE79766.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.630873702027429 6.80171206870269 3.57815626455959e-05 0.00081267054105954 10.7065015244293 5.38393498227784 0.630873702027429 0.0781349455928254 AT5G36210_at 8.33132649607206 8.39355589198333 8.91652146972668 8.83242363612258 9.10417362433407 8.72485120892365 8.50230664394192 8.34551062416432 8.4855716249209 8.38270977359188 9.19621276211217 9.21809214590616 8.97380328171536 9.25043909693761 9.05233807850762 9.2379387239083 9.00179464703277 9.23442666932818 8.3503504505623 0.124978420825283 0.124687908261194 0.125436801619874 0.127253390957051 0.121653206454093 0.135563207827984 0.131660864581372 0.131357128552118 0.129269304746121 0.126165964351255 0.121878014740755 0.125364050290835 0.122310787992920 0.121171504520393 0.126604000300614 0.121171504520393 0.126406262160565 0.123864684382810 0.127965628706843 5 5|0 -|/ 14265487 14266582 14266083.7 14265143 14270520 - gene protein_coding_gene TRUE TRUE AT5G36210.1 serine-type peptidase similar to acylaminoacyl-peptidase-related [Arabidopsis thaliana] (TAIR:AT4G14570.1); similar to Os06g0215400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057138.1); similar to Os06g0215300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057137.1); similar to peptidase S9, prolyl oligopeptidase active site re (GB:YP_721155.1); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Cytochrome cd1-nitrite reductase-like, C-terminal haem d1; (InterPro:IPR011048); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain TolB, C-terminal; (InterPro:IPR011042) 0.620368815029503 6.79868532432146 3.59213967596087e-05 0.000815419307507112 10.7026780097502 17.4197543454283 0.620368815029503 0.0733015575950023 AT5G44990_at 1.81159961604508 1.68710305895820 3.19259686112885 3.46759988828196 2.41377887372004 1.73582211404799 0.475258587913427 0.511784324928806 0.607218942015631 1.2323173520809 0.805220805802232 1.05982688845413 0.849636883859552 0.428845826036167 0.916940126512266 0.698850017234075 0.738808958598788 1.03579055573719 0.785899380111996 0.248517033466273 0.252909993576090 0.255818115121352 0.27023418279805 0.260997228071910 0.251526562839603 0.255471175344993 0.250484243372214 0.254202037975169 0.247991147543356 0.250026497009339 0.245044573418539 0.251349333697569 0.256823467851043 0.244539561284511 0.244539561284511 0.250754033845524 0.254551880887092 0.245634581826647 5 5|0 +|/ 18181233 18181869 18181634.4 18180597 18181995 + gene protein_coding_gene TRUE TRUE AT5G44990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABC75353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.761303910188228 6.79695988282971 3.60013742376428e-05 0.000816807156550162 10.7004977695328 2.75788553188578 0.761303910188228 0.128583872229709 AT5G07200_at 1.45357425981384 1.38401775255408 2.29567877447718 2.28925496705134 2.48134448565406 2.77739194225926 1.47769593679046 1.39694961124685 2.38133332109682 1.9311014474611 3.09161275071559 1.40420317135893 2.26337206471382 2.52706747112749 1.67502176776575 1.8157626288674 1.78242531811787 2.1321683052881 1.53577598699343 0.212719818984596 0.212921013869904 0.215377454737355 0.211809002858574 0.211101036355494 0.2119334326297 0.210631543670964 0.213393331683745 0.212678019348409 0.208297295133888 0.211621487642637 0.209314215069314 0.208012733479287 0.216354975402359 0.208272445704339 0.208731923290166 0.211677310865964 0.208012733479287 0.211920243411982 5 5|0 -|/ 2243926 2244477 2244291.9 2243554 2245340 - gene protein_coding_gene TRUE TRUE AT5G07200.1 YAP169 (Gibberellin 20 oxidase 3); gibberellin 20-oxidase encodes a gibberellin 20-oxidase. Identical to Gibberellin 20 oxidase 3 (EC 1.14.11.-) (Gibberellin C-20 oxidase 3) (GA 20-oxidase 3) (20ox3) [Arabidopsis Thaliana] (GB:Q39112); similar to ATGA20OX4 (GIBBERELLIN 20-OXIDASE 4), gibberellin 20-oxidase [Arabidopsis thaliana] (TAIR:AT1G60980.1); similar to (GB:CAB96202.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.584954375909868 6.79246776601264 3.62104920246548e-05 0.000821121985407722 10.6948196001208 3.96241735119496 0.584954375909868 0.0544623231897687 AT5G54590_at 3.25871671194522 3.21355257249562 3.91145793646704 3.68493648871942 4.04403177571805 3.87272290013698 4.26756910512863 3.95386419306243 3.36415812665373 3.00568134647547 4.34385030620047 4.53480029803003 4.30566965245558 4.30695166136399 4.4927267612934 4.13440965858293 4.12417119920355 4.01078326175865 3.36993129829124 0.240525725366156 0.238991197857909 0.230996523613191 0.230996523613191 0.236276177892742 0.237893346862786 0.236593937981292 0.233770147784638 0.236721119269374 0.236082329492867 0.237110691274200 0.236574613684456 0.241934894266930 0.239734879093806 0.239436209075313 0.230996523613191 0.241857995480088 0.235117336230231 0.239121008104176 5 5 + 22197905 22199096 22198508.727 22196979 22200052 + gene protein_coding_gene TRUE TRUE AT5G54590.1|AT5G54590.2 protein kinase family protein similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15730.2); similar to Os08g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060962.1); similar to protein-serine/threonine kinase [Nicotiana tabacum] (GB:BAA06538.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15730.2); similar to Os08g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060962.1); similar to protein-serine/threonine kinase [Nicotiana tabacum] (GB:BAA06538.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.619970861161663 6.78651332409384 3.64896999629311e-05 0.000827020861547631 10.6872885465309 7.53998676395978 0.619970861161663 0.0736467601478561 AT5G04360_at 8.39703055673405 8.23221336727297 8.78729434138356 8.45529055878702 9.22126868072771 8.86652671322564 8.63146751072716 8.36218932389848 7.8643311495961 8.05411465544159 9.06086285127922 8.81921207171489 8.46772839840468 8.83736078525643 8.22144573522213 8.61887021889368 8.7592794104202 8.64460189146132 7.30903713039042 0.141364020135975 0.141071961807746 0.141071961807746 0.145050098049958 0.141071961807746 0.147561617576323 0.144527464918418 0.146635382198384 0.152782947785937 0.157190134244607 0.141320695849697 0.141071961807746 0.150645604003158 0.150093159165858 0.152191732161908 0.142521086777941 0.153228052323829 0.152890895873149 0.174626957536472 5 5|0 +|/ 1227220 1228150 1227777 1221531 1228612 + gene protein_coding_gene TRUE TRUE AT5G04360.1 ATPU1 (PULLULANASE 1); alpha-amylase/ limit dextrinase Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. similar to ATISA3/ISA3 (ISOAMYLASE 3), alpha-amylase [Arabidopsis thaliana] (TAIR:AT4G09020.1); similar to H0806H05.4 [Oryza sativa (indica cultivar-group)] (GB:CAC09471.2); similar to pullulanase [Spinacia oleracea] (GB:CAA58803.1); similar to pullulanase-type starch debranching enzyme [Zea mays] (GB:AAD11599.1); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193); contains InterPro domain Alpha-1,6-glucosidases, pullulanase-type; (InterPro:IPR011839) 0.681522871197511 6.78270210285675 3.66696254076572e-05 0.000830664561180117 10.6824655228013 16.8297423726650 0.681522871197511 0.100273765426600 AT5G56260_at 9.5684368696614 9.72972994862453 10.5255369549033 10.5008178292473 9.98277396751345 9.90104349971706 9.35028776912636 9.40571965419569 8.92607538223979 9.2617225943122 9.57908083329128 9.48659838072034 9.5347091017965 9.41803036624342 9.1642946656581 9.55188797904797 9.5315809436709 9.59667693776241 9.07142649989652 0.136692526254358 0.136233232754106 0.141428287790693 0.138428369439585 0.138191809928232 0.136844160218602 0.133375800732366 0.140525138994319 0.156453433518899 0.132725475241591 0.141750855995525 0.137864091968225 0.136592563882843 0.145805475734641 0.139778368868992 0.135445686719300 0.148060783640310 0.144499711269070 0.138830187835496 5 5 - 22792775 22793199 22793030.364 22792551 22794530 - gene protein_coding_gene TRUE TRUE AT5G56260.1 dimethylmenaquinone methyltransferase family protein Identical to Regulator of ribonuclease-like protein 3 [Arabidopsis Thaliana] (GB:Q9FH13;GB:Q53XH2); similar to dimethylmenaquinone methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G16450.2); similar to S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84438.1); contains InterPro domain Protein of unknown function 1935; (InterPro:IPR010203); contains InterPro domain Dimethylmenaquinone methyltransferase; (InterPro:IPR005493) 0.555224372325499 6.77967118140974 3.68133944274942e-05 0.000833485843874632 10.6786284639994 19.1551760915437 0.555224372325499 0.0330072254182050 AT5G04440_at 9.7183499021171 9.56203104566037 10.4356470564011 10.3941773483162 10.4066844826602 10.3048505133350 10.1077076753242 10.1243363064858 9.56015610749371 9.69249737909653 10.1457334293047 10.1174052724116 10.3307343585887 10.38819641653 10.076970404715 10.5406664732602 10.3102509239687 10.1950449391323 9.72693959756752 0.094885596022033 0.0919233260762446 0.0945979343017645 0.095657094315771 0.0900585646184989 0.0949519887562895 0.0900585646184989 0.0969782447008784 0.0961054317559386 0.0931551205816917 0.0940688456464265 0.0927000605764912 0.0903238539137248 0.0967902975045894 0.0962783410361153 0.0940019280590573 0.0989271623529995 0.0949123870757355 0.0932280317959318 5 5|0 +|/ 1255333 1256102 1255733 1254845 1256954 + gene protein_coding_gene TRUE TRUE AT5G04440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31115.1); similar to Os03g0146500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048959.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55108.1); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.555247266817121 6.77753180962707 3.69152384676321e-05 0.000835355460630854 10.6759192869766 20.0932178605999 0.555247266817121 0.0331985381807165 AT5G38560_at 5.91015987373121 5.92540777413622 6.2634627459141 5.91101880833098 6.5030309855843 5.79522716573476 5.58628142919724 5.80025569443908 5.44642581990133 5.94485710446174 6.92652462422451 7.4241750053147 6.98076676413492 7.39567111916944 7.18105139308183 7.12398375133805 6.45706404785019 6.59285261167607 5.78608509645912 0.206428809822002 0.212187903265401 0.213174992955799 0.20701939124916 0.206080074284058 0.207082310424754 0.205072312857358 0.214876201782797 0.222454967387989 0.211313305545169 0.211775268020411 0.202157286967115 0.204078273643468 0.233566844444476 0.214984845102640 0.217430852211001 0.207643338835525 0.212388819995511 0.208003676753617 5 5|0 +|/ 15459479 15460212 15459908.1 15456479 15460394 + gene protein_coding_gene TRUE TRUE AT5G38560.1 protein kinase family protein similar to protein kinase [Arabidopsis thaliana] (TAIR:AT1G26150.1); similar to protein kinase family protein [Musa balbisiana] (GB:ABF70139.1); similar to Os01g0110500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041798.1); similar to protein kinase family protein [Musa acuminata] (GB:ABF70054.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.798565278919873 6.77474252853815 3.70484764794e-05 0.000837933170869392 10.6723861148754 12.3298808120699 0.798565278919873 0.141780303415309 AT5G37290_at 4.60496710895176 4.85877820016647 6.63808823325539 6.31376327477626 6.66433568775911 5.64679178675362 6.4967755671667 5.43041348688646 3.44259192475679 4.12787797275365 5.37304835674423 5.72578869386621 5.99970193715954 5.16781636730213 5.90858879501123 5.4185289437041 4.91519511094809 5.42311986448134 4.44592267912387 0.242171269409483 0.235941168652879 0.239024584390221 0.240533284042886 0.246545130467621 0.235941168652879 0.240714875123368 0.240987449519046 0.240601113547222 0.241089940773457 0.235941168652879 0.237306082284434 0.247212657404415 0.253968086239516 0.241981199411454 0.237702702031097 0.242413151821982 0.239375975208813 0.235941168652879 5 5|0 +|/ 14780005 14781278 14780879.625 14779600 14781574 + gene protein_coding_gene TRUE TRUE AT5G37290.1 armadillo/beta-catenin repeat family protein similar to Armadillo [Medicago truncatula] (GB:ABE83267.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 1.22701023564196 6.77383919396461 3.70917376310522e-05 0.000838474228671647 10.6712416246609 10.5802080186462 1.22701023564196 0.264843211738221 AT5G42130_at 5.83431423253286 6.29482147415138 6.16508642638776 6.43724491613463 6.70483629515731 6.60863006262505 6.61032481434946 6.83061282375941 5.71742281309421 5.96114798824063 7.0816719420897 7.62122810100078 7.02525398322221 7.38184126647897 7.61755434737491 7.42227145566628 6.40018985678502 6.42432940579793 5.84409450136183 0.199869437648969 0.185795748395410 0.186649928370105 0.196260803233239 0.186995131939971 0.194155921439975 0.185011046342520 0.189687724198044 0.208839526210516 0.190780778545420 0.190432276593863 0.185765246126273 0.184961345285464 0.197846911608578 0.190025790293481 0.185905843479093 0.205388696244466 0.189931508621368 0.189851034252563 5 5 - 16852802 16853355 16853066.455 16852527 16854067 - gene protein_coding_gene TRUE TRUE AT5G42130.1 mitochondrial substrate carrier family protein similar to SAMC2 (S-adenosylmethionine carrier 2), binding [Arabidopsis thaliana] (TAIR:AT1G34065.1); similar to mitochondrial carrier protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD88246.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.683667599723829 6.77306973650657 3.71286301826707e-05 0.000838527270567261 10.6702666591307 12.9170743701543 0.683667599723829 0.101487318429999 AT5G11900_at 7.82494697743066 7.76102021397638 8.57921455687173 8.3849594327446 8.77007333585464 8.05817657445966 8.0686008423697 7.84772791602822 6.96866758016612 7.00152037083249 7.82477642603945 7.96429222322685 7.68957375299082 7.65575847747323 8.10538103756471 7.69206415252253 7.9009272174221 7.77436170977821 6.58123059545624 0.123238032559385 0.128241330722578 0.132605180626146 0.126821214614676 0.131312826712559 0.137302578045205 0.122434836414157 0.131192598506704 0.148730820479396 0.132064049680029 0.124803328693236 0.129751604588178 0.122434836414157 0.129904714965736 0.123646609143796 0.123588384097448 0.133220975946308 0.133060343445458 0.141905109744504 5 5|0 +|/ 3834242 3835855 3835009.125 3833986 3836279 + gene protein_coding_gene TRUE TRUE AT5G11900.1 eukaryotic translation initiation factor SUI1 family protein similar to Os01g0195500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042291.1); similar to putative density regulated protein drp1 [Oryza sativa (japonica cultivar-group)] (GB:BAD72209.1); contains InterPro domain Density-regulated protein DRP1; (InterPro:IPR005873); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950) 0.773975506670186 6.77298356951429 3.71327640175969e-05 0.000838527270567261 10.6701574732068 15.5000223429397 0.773975506670186 0.133757209962628 AT5G16470_at 10.6012607275089 10.7528464807129 11.2689211187538 11.4122454628156 11.4024590163677 11.3826191403188 10.4760474321112 10.7963596819075 10.6494917977551 10.6755642281514 11.2733363642118 11.2286951047107 11.1717378013737 11.1319896484301 11.0749573258499 11.2977629488323 10.9494277790734 11.1517153146118 10.6626634124956 0.0704396025527884 0.0646498069179573 0.0642270863962547 0.0646792397115586 0.0636234404257014 0.0658026175018309 0.0636234404257014 0.0643167181625952 0.0716194333780663 0.0662030600735778 0.0650352761562738 0.0640169082099167 0.0636234404257014 0.064721434446753 0.0666048291636021 0.0639176834270042 0.0743625960306159 0.0691459859312607 0.0670150534363496 5 5 + 5379542 5379786 5379658.182 5379419 5380043 + gene protein_coding_gene TRUE TRUE AT5G16470.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G02790.1); similar to hypothetical protein MtrDRAFT_AC148171g28v1 [Medicago truncatula] (GB:ABE89815.1) 0.603656121878242 6.76866937935803 3.73403700181705e-05 0.000842776456328616 10.6646894119344 21.9228578485724 0.603656121878242 0.0662403130025447 AT5G12310_at 8.44151897877397 8.56750980796783 9.19167879512581 9.38083334714725 9.3661046849208 9.2970217937775 8.82114206985839 9.01858069581389 9.16428594559944 8.9983629085121 9.68066490429358 9.34471748828667 9.64575161560693 9.69471026242563 9.5291804884501 9.82287828151238 9.51675585148775 9.68301392310547 8.98493722333354 0.0857631667593018 0.0895336638287872 0.0845782369818486 0.0889038371208217 0.0854226681353318 0.088187710991144 0.0883647663857731 0.0875041400572498 0.0891913335511568 0.0878307027272191 0.0861419812791916 0.0833096542218168 0.0854598760006665 0.0837789658114201 0.0866257413986005 0.0844027542671977 0.0899552759774372 0.0867471746384904 0.0859851246449896 5 0|5 /|- 3980498 3981179 3980818.111 3980227 3982443 - gene protein_coding_gene TRUE TRUE AT5G12310.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G19430.1); similar to Os01g0954400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045432.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.58111775494351 6.7667221384808 3.74344829891214e-05 0.000844461002450067 10.6622204866180 18.3425010021954 0.58111775494351 0.0534533307516247 AT5G65220_at 9.07168240746807 9.32950608081346 9.20636517255214 9.21968956790048 9.80441927183865 9.6546403012691 9.00499648061823 9.1123980859515 9.02076113625436 9.32267849770252 10.1881883664991 10.4072766756328 9.69399903783901 10.0496528007701 10.3962668373005 10.1037873939697 9.4674241294921 9.72603598704449 9.19328621881209 0.135044295908967 0.13124332417055 0.138060522467314 0.129738555871756 0.135461924138256 0.150469330073070 0.139649683176077 0.130164928704597 0.148984871875934 0.134246987772496 0.132806386201772 0.131590811152479 0.131025078755503 0.131096118623356 0.139665677856514 0.132195709053704 0.133847296609301 0.140354150670078 0.142151643906383 5 5 + 26078540 26079659 26078850.909 26078455 26079908 + gene protein_coding_gene TRUE TRUE AT5G65220.1 ribosomal protein L29 family protein Identical to 50S ribosomal protein L29, chloroplast precursor (CL29) (RPL29) [Arabidopsis Thaliana] (GB:Q9FJP3); similar to 50S ribosomal protein L29, chloroplast precursor (CL29) (GB:Q9SWI6); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) 0.583401550328055 6.76630190475591 3.74548269370020e-05 0.000844480552861485 10.6616875967362 18.8919559316305 0.583401550328055 0.0548939188953831 AT5G52830_at 3.68465023437191 4.17704000432049 5.81303039510552 6.14459286236761 4.70878269321444 5.24677775283863 4.18111535165704 4.61190220898133 3.4684760229705 4.17549846244133 3.56355402795065 3.75670468379425 4.05820342395944 3.84956357430563 2.76555618855878 5.07700428125445 4.93259942874678 4.91430990114343 3.56350926423718 0.236014446895859 0.239727416037804 0.237881830319066 0.241119849922927 0.234907253370373 0.235511184447490 0.236697047475098 0.234243302633074 0.236212450921510 0.239406345536107 0.231441692238685 0.236046287467845 0.234780408160608 0.235950077462946 0.237758654031828 0.231441692238685 0.234811173213347 0.235384815401626 0.232903854669120 5 5 + 21428788 21429392 21429128.455 21428078 21429566 + gene protein_coding_gene TRUE TRUE AT5G52830.1 WRKY27 (WRKY DNA-binding protein 27); transcription factor member of WRKY Transcription Factor; Group II-e Identical to Probable WRKY transcription factor 27 (WRKY DNA-binding protein 27) (WRKY27) [Arabidopsis Thaliana] (GB:Q9FLX8); similar to WRKY22 (WRKY DNA-binding protein 22), transcription factor [Arabidopsis thaliana] (TAIR:AT4G01250.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE83065.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.846738999106685 6.76581545893919 3.74783911274303e-05 0.000844572650867451 10.6610707129294 8.74624386548904 0.846738999106685 0.157412918986418 AT5G58650_at 6.8494025303195 7.57367230452906 8.67358349900637 8.75749031231425 9.56003053387396 8.44741789103215 8.04453781020249 7.49625341089506 6.62244884487975 7.1502664223645 8.14191605905275 7.29740769811743 8.04694989513707 7.99071816874804 7.1434612381261 8.99811767162112 8.59701317526915 7.3479389710407 7.17143927513499 0.253640120582535 0.263302926917364 0.259624945637771 0.249099502904781 0.249771866138661 0.266998236618292 0.252158169993819 0.260263604069028 0.274306405124671 0.262794341144871 0.244328169396781 0.242264252687323 0.258752487653316 0.26268358006269 0.251747284336008 0.246170307160624 0.260906682506918 0.259043508917794 0.250314044136380 5 5|0 -|/ 23717153 23717388 23717273 23716934 23717452 - gene protein_coding_gene TRUE TRUE AT5G58650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G47295.1) 1.16635977862473 6.76425473937992 3.7554102490511e-05 0.00084583917523889 10.6590912645585 15.638711140071 1.16635977862473 0.248990105794661 AT5G08110_at 2.38224536303370 2.48953566072039 2.90872661328305 2.74668679828304 2.96073912687878 2.75270637671291 2.73820078978021 2.67350482230269 2.81714274581816 2.33038295731609 3.45201170591448 3.76581402071376 3.52173063724521 3.65012094001078 3.26270239374415 3.61962754679019 3.75776816279133 3.7775315865992 3.01380328489205 0.194034746066935 0.189632629460834 0.193681078343638 0.195395806089589 0.191953139762797 0.190637475188077 0.193694775087330 0.195762244220195 0.192992125158158 0.200003293900491 0.19275163195603 0.192699731671247 0.190064480215784 0.201817567617905 0.191230700450500 0.188417409575324 0.199328291755497 0.193637798178314 0.188417409575324 5 0|5 /|- 2595042 2595703 2595324.111 2594971 2600115 - gene protein_coding_gene TRUE TRUE AT5G08110.1 DEAD/DEAH box helicase, putative similar to RecQl3 (Recq-like 3), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT4G35740.1); similar to Os07g0606500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060229.1); similar to ATP-dependent RNA helicase, DEAD [Dehalococcoides sp. CBDB1] (GB:YP_307973.1); similar to Os02g0111900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045657.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.575906724023785 6.75904432226641 3.78080560442669e-05 0.000850721159159187 10.6524803960027 5.8672213789918 0.575906724023785 0.0505222719086128 AT5G55620_at 10.1407477500903 10.5316765173096 10.4294293654065 10.6175316556258 11.1577936835720 11.1365051756719 11.0459623296736 11.2710778881543 11.1564111243848 11.1041495645690 12.3850456560818 12.4887506582968 12.6287652157502 12.1814499690314 12.1259070770162 12.6352015438603 12.0443094772077 12.185646772303 11.1581481926818 0.0743090142925204 0.0697745984805434 0.0755595565376026 0.074394585313182 0.0689799596617234 0.0737479334913701 0.0686034518740766 0.0710703257460902 0.0781526523082024 0.0711070694291976 0.0708088586117773 0.0686442574427629 0.0724576073201056 0.077302047081385 0.0720049423792758 0.0694669559160006 0.074174170783675 0.0720338094241436 0.0691835282396978 5 5 + 22547609 22547869 22547725.182 22547430 22548165 + gene protein_coding_gene TRUE TRUE AT5G55620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09950.1); similar to Os06g0523300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057752.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45825.1) 0.641381883871839 6.75900257261269 3.78100983469634e-05 0.000850721159159187 10.6524274091389 22.5283176323906 0.641381883871839 0.0846621173590527 AT5G53050_at 8.84188210740587 9.08848951068913 9.93717545054092 9.8997441891441 10.0390652994522 9.61963907583567 9.51970382754252 9.46231509605413 9.20222485463065 9.15467512113143 9.83636577971521 9.8634544847485 9.92970895361305 9.97092915923267 9.57071027973821 10.0649901454925 9.7380602567750 9.7514280236639 9.24956044582287 0.113977126410649 0.115460961665379 0.115024259435071 0.113359412145535 0.115953905668319 0.115840258384915 0.117001073117697 0.118958320008777 0.135660597521627 0.121876120724170 0.118775790062646 0.117571871053738 0.117566406647107 0.116853403307826 0.119229353261115 0.112916498922904 0.122442976147903 0.124350191924174 0.112916498922904 5 5 - 21527762 21528922 21528238.6 21527321 21530802 - gene protein_coding_gene TRUE TRUE AT5G53050.1|AT5G53050.2|AT5G53050.3 hydrolase, alpha/beta fold family protein|hydrolase similar to epoxide hydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G02340.1); similar to Os05g0542200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056192.1); similar to putative hydrolase [Solanum commersonii] (GB:CAJ19277.1); similar to Os02g0299300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046616.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089)|similar to epoxide hydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G02340.1); similar to Os05g0542200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056192.1); similar to putative hydrolase [Solanum commersonii] (GB:CAJ19277.1); similar to Os02g0299300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046616.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.64218038991552 6.75854270685916 3.78326018353157e-05 0.000850785976013013 10.6518437507185 19.0724314992001 0.64218038991552 0.0850309922633874 AT5G15730_at 6.8220627292088 6.81109049140828 7.9117640397878 7.78994095549772 8.23759396888487 6.80452040946178 6.15054900372225 5.54102087710508 6.02746768679635 5.13363687660486 6.81550234109778 6.70703673911675 6.54149237472095 7.06951195011581 6.02100861291679 6.45530274202116 5.73461695818318 6.74851621697367 4.97123311516177 0.184132832148771 0.191499024696132 0.198935760789338 0.190751267358087 0.197536387654035 0.211018824703922 0.192153552725167 0.18484026748918 0.188839149941525 0.195497398616086 0.187492636745617 0.184132832148771 0.184803098229685 0.187961835483218 0.184723233759091 0.189644438319034 0.199921485955706 0.194047783309766 0.200037037461103 5 0|5 /|+ 5132426 5132984 5132608.667 5130513 5133190 + gene protein_coding_gene TRUE TRUE AT5G15730.1|AT5G15730.2 serine/threonine protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54590.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96839.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.24447583354294 6.75690507990417 3.79128559904440e-05 0.0008521487592139 10.6497650388063 12.9531025017584 1.24447583354294 0.270330308198648 AT5G23380_at 3.73351241263237 3.80046528421735 3.80757073806044 4.06089365319042 4.28859852435017 4.40730319871785 2.67747007441475 2.78630100101786 2.84625189058834 3.49111867165791 3.75906326015311 3.56734868046807 3.64004306698594 4.22615574098698 3.51755548238548 3.65300004774476 3.58244640161682 3.4040143386828 3.87047010900896 0.227023762560172 0.220183312068570 0.227105014904259 0.224883729086238 0.232678348460497 0.221477850872925 0.231143270009367 0.230071465167719 0.228601869536484 0.224334145921507 0.218313895740131 0.227095025296007 0.219631731977281 0.218313895740131 0.228040414338004 0.221344021010331 0.219453325016644 0.229522876101096 0.224453852815591 5 5 + 7868389 7870052 7868991.273 7866745 7870305 + gene protein_coding_gene TRUE TRUE AT5G23380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03610.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO39871.1); similar to Os01g0513400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043182.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46235.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) 0.578872077901033 6.74480589117986 3.85114960363464e-05 0.000865155599802134 10.6343950422299 7.23092282805668 0.578872077901033 0.0532238492473533 AT5G40340_at 5.94108910184947 6.41162464566782 6.95958429411647 7.07403908482333 7.85518314762497 7.09917560261618 6.46351971230903 5.83583739803016 7.24399518859307 6.09693164799391 8.27696768378999 7.84403879762862 7.11475084933561 8.15189529082524 6.91217419995608 7.45872373238944 6.87349859778336 6.7880086842289 6.48887816822043 0.260805011132313 0.257483276899127 0.259337950905623 0.262471549275402 0.265576074810346 0.269364992222115 0.256661894038744 0.253017071825477 0.264083625543015 0.266858383767182 0.253343972260832 0.25924075929894 0.253017071825477 0.272627877474889 0.269384588538734 0.255702285778266 0.267853039677373 0.265630462062480 0.255593214133272 5 5 - 16149031 16149416 16149230.182 16148882 16151908 - gene protein_coding_gene TRUE TRUE AT5G40340.1 PWWP domain-containing protein similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27860.1); similar to hypothetical protein DDBDRAFT_0188541 [Dictyostelium discoideum AX4] (GB:XP_636078.1); contains InterPro domain PWWP; (InterPro:IPR000313) 0.9507750228604 6.74304025353769 3.85997021492405e-05 0.000866611397290806 10.6321503317258 13.723727738927 0.9507750228604 0.189574736994646 AT5G58520_at 6.70605649459096 6.33026024553761 7.52409817640677 7.13311879290258 7.28574601767708 7.45243221144944 6.71807326437802 6.83593432962253 7.05140275244125 7.29528392944542 7.79288487118921 7.59946625279214 7.81582758261003 8.04283129495065 7.37021999459765 8.00047493267247 8.16126847905737 7.61259870050162 7.0903855112832 0.179147617661684 0.187606169661009 0.177372940792705 0.180257480374867 0.178781347474909 0.178589685192578 0.173640861248304 0.177310689239820 0.193100119462056 0.175520561679617 0.172958109872442 0.172174093777120 0.182009545302621 0.178281901942243 0.173305356536160 0.172862066184885 0.180727293595207 0.171221584252411 0.177416185098868 5 5|0 +|/ 23673919 23675122 23674701.444 23672460 23675388 + gene protein_coding_gene TRUE TRUE AT5G58520.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07140.1); similar to Os03g0295600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049825.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95434.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.677511749283234 6.74270900037582 3.86162747776168e-05 0.000866611397290806 10.6317291491466 14.4707835638721 0.677511749283234 0.100276661507700 AT5G44800_at 5.43487186861723 6.26256512002339 6.61689305405142 6.81036083276718 7.09039068978525 7.02177182416468 5.99041689559342 5.89822036052435 6.3563363448256 5.52970360838372 6.73053549566758 6.83231959488301 6.50007652344502 6.78329611673244 6.38020191980407 6.82424345592384 6.36914231204566 7.20891171492726 6.29887613267397 0.181255487348940 0.178215951286199 0.180075470702667 0.178215951286199 0.181334344800972 0.180873725446783 0.181029498751201 0.185696006139622 0.181813370327359 0.181696749520739 0.178215951286199 0.179882149510767 0.180281503024228 0.184540485378456 0.183112870120512 0.183580803147623 0.190961509762936 0.178215951286199 0.178215951286199 5 5 - 18100892 18101377 18101226.545 18100646 18110679 - gene protein_coding_gene TRUE TRUE AT5G44800.1 CHR4/MI-2-LIKE (chromatin remodeling 4); ATP binding / DNA binding / chromatin binding / helicase similar to PKL/SSL2 (PICKLE, SUPPRESSOR OF SLR2) [Arabidopsis thaliana] (TAIR:AT2G25170.1); similar to PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 9 [Canis familiaris] (GB:XP_867801.1); similar to Os07g0497000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059705.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Chromo; (InterPro:IPR000953) 0.815143867693357 6.74054187385611 3.87248852511354e-05 0.000868599205722877 10.6289732956724 12.7733011241774 0.815143867693357 0.148435578677536 AT5G10950_at 4.57594498877748 4.77671839065255 6.10119934172146 5.92239760193814 6.77210470078883 5.29255603648909 4.98076451316886 4.62164678430659 4.55570341408275 5.50372559180512 6.81246489831646 6.59527139251876 6.68730476620243 6.42121436836841 6.26284046270723 6.95077102948582 5.76755470596125 5.60926163903834 5.57465887651113 0.221486785996161 0.222119518977218 0.228922494812065 0.222742951183521 0.222548766678602 0.241749930341468 0.219205583884788 0.225959378670944 0.237655752892014 0.231126907694577 0.224309880475131 0.219447772248025 0.222862152422124 0.224973753420789 0.219377037062967 0.221535578808555 0.228524514105623 0.236914479974643 0.222573808429859 5 5 - 3459679 3460086 3459904.818 3459274 3461735 - gene protein_coding_gene TRUE TRUE AT5G10950.1 cylicin-related similar to binding [Arabidopsis thaliana] (TAIR:AT1G80810.1); similar to Tudor [Medicago truncatula] (GB:ABE86625.1); contains domain Tudor/PWWP/MBT (SSF63748); contains domain ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5 (PTHR12663:SF1); contains domain no description (G3D.2.30.30.140); contains domain ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5-RELATED (PTHR12663) 1.23013426568326 6.73533178232096 3.89873471056913e-05 0.000874034060778212 10.6223450474248 11.1802655623760 1.23013426568326 0.267553357529120 AT5G37510_at 10.3072445950896 10.4688071535410 11.1122553270299 11.1419423291040 10.5402336600304 10.6944584937044 10.3687002653878 10.4602684387259 9.7518843641847 9.90209294812142 10.4438385193776 10.5818251039944 10.4322250013225 10.3635807894880 10.585669608414 10.4818059862417 10.5554526945769 10.3530256490658 9.8106343365583 0.0819801779391308 0.0813881167276746 0.0830034820940113 0.0824773573233627 0.0819068914915846 0.0841142176201524 0.0819775626122104 0.0832726616036487 0.0848649427306937 0.0849461513966968 0.0811983714580651 0.0826311040044881 0.0811983714580651 0.0829049780243907 0.0825059154998288 0.0842884201107192 0.0877246456170195 0.0837736903477553 0.0836779760014823 5 5|0 +|/ 14917034 14917542 14917271.3 14914640 14917887 + gene protein_coding_gene TRUE TRUE AT5G37510.1|AT5G37510.2 EMB1467 (EMBRYO DEFECTIVE 1467); NADH dehydrogenase Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. Identical to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (75 kDa mitochondrial complex I subunit) [Arabidopsis Thaliana] (GB:Q9FGI6;GB:Q940B1); similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) (GB:Q43644); similar to NADH:ubiquinone oxidoreductase 78 kDa subunit [Chlamydomonas reinhardtii] (GB:AAQ73136.1); similar to unnamed protein product [Macaca fascicularis] (GB:BAE01362.1); contains InterPro domain NADH-quinone oxidoreductase, chain G; (InterPro:IPR010228); contains InterPro domain Molybdopterin oxidoreductase; (InterPro:IPR006656); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain Respiratory-chain NADH dehydrogenase 75 kDa subunit; (InterPro:IPR000283); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 0.562054021026523 6.73482666521491 3.90128942297460e-05 0.0008741547933304 10.6217022322453 20.7848463505008 0.562054021026523 0.0420895867735402 AT5G20160_at 9.34092056436847 9.4861330351592 9.66786518203379 9.78679852092172 9.56076270030415 9.46698719292617 9.18997607480475 9.25525285110812 8.06617109503636 7.55627334866108 8.39773573409155 8.79877933970803 8.79611196985718 8.42004554824237 8.80510432904207 8.68946829376642 8.8342769191165 8.33266454518579 7.84641325912281 0.162527500120736 0.150382873280412 0.15398372482688 0.156939755545954 0.155137761539621 0.162730063712418 0.149846999524371 0.151831882161436 0.157244355487332 0.168241194975367 0.153847083504852 0.151651275222152 0.151414943366022 0.158310151507392 0.151125476862572 0.146714004911915 0.152933501075857 0.156772466280317 0.151032130913138 5 5 - 6804240 6804949 6804563.909 6803784 6805203 - gene protein_coding_gene TRUE TRUE AT5G20160.1|AT5G20160.2 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to Os03g0241200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049514.1); similar to ribosomal protein L7 [Hyacinthus orientalis] (GB:AAT08750.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7AE; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038)|similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to Os03g0241200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049514.1); similar to ribosomal protein L7 [Hyacinthus orientalis] (GB:AAT08750.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038) 0.556926767477906 6.73312489286268 3.90990966968097e-05 0.000875633792336973 10.6195362753159 17.6979499664448 0.556926767477906 0.0380274399600854 AT5G66560_at 4.25662208315915 4.82672989303222 4.85885537432360 4.5068450167995 5.54265700164855 5.27435573233456 5.05372544230208 4.89542385889709 4.51765754376817 4.45150787026165 6.13452156456459 6.51285371627855 5.9315920340076 6.01896362107277 6.3918116804594 5.87761029226347 4.39515696840591 5.56072586026975 4.94030372214169 0.202732419156705 0.205391053284959 0.207697410145371 0.204512128156857 0.197791201325868 0.214850594516250 0.203793106818815 0.198450109247604 0.222420439506184 0.202163487696613 0.202065407879613 0.201988278117905 0.201681706127771 0.201380866081106 0.205818004562591 0.198161786035676 0.222588661092012 0.211273578099011 0.204988552407062 5 0|5 /|+ 26583439 26583830 26583576.333 26581414 26584079 + gene protein_coding_gene TRUE TRUE AT5G66560.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G50840.1); similar to Os03g0767600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051388.1); similar to putative NPH1 photoreceptor-interacting protein [Oryza sativa (japonica cultivar-group)] (GB:AAP50946.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.751983858518502 6.73232537970904 3.91396663383422e-05 0.000876089833598532 10.6185185384348 10.1465988899233 0.751983858518502 0.127870788916540 AT5G22710_at 3.37665362747699 2.87896198855801 3.83257829535147 3.19669209712406 4.84007427556885 4.32153982530981 3.49935703842385 3.06999881215434 2.58379361149907 2.95691129153029 4.05298598682018 4.06137903419474 4.19158086011671 3.53917447657022 3.57519173998846 4.21260950391822 3.52666180089479 3.3416663415644 2.88567564812506 0.221892982125503 0.224587435532087 0.233499792825938 0.222903491140328 0.232842742737512 0.25063525981556 0.228639904817378 0.224707624824016 0.226376077278866 0.224020522906027 0.22816278594111 0.223926911126670 0.221814846125459 0.228307138553983 0.233102712249048 0.224170454820173 0.229498831149586 0.228307491825381 0.232828373062776 5 5 - 7547888 7548522 7548215.727 7547800 7549372 - gene protein_coding_gene TRUE TRUE AT5G22710.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22670.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596) 0.92267047882112 6.72775969404423 3.93722114668332e-05 0.000880840305130448 10.6127049012662 6.93770686252589 0.92267047882112 0.181935906911053 AT5G51770_at 4.40140935638641 4.41909641605149 5.74140320895373 6.06196507517722 4.52956778821054 4.64200180611709 4.00453763047483 3.89105929970384 4.07250384624075 3.84916397970721 4.18257926344766 4.06625507201352 4.43615949415351 4.68276661066943 3.83458135643286 4.51395739557988 4.14806266910589 3.80381130023708 4.34588169369866 0.245160031783036 0.240264177603754 0.245052378031295 0.255198123216338 0.239601296855775 0.250734103007882 0.252280618565870 0.239601296855775 0.253146843560966 0.250813369935878 0.24213547352475 0.239601296855775 0.239601296855775 0.245286432781183 0.249396771606642 0.239921166961327 0.253312170104717 0.252222542511556 0.253726851876635 5 5 + 21049755 21050149 21049943.909 21048256 21050220 + gene protein_coding_gene TRUE TRUE AT5G51770.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25390.1); similar to Os03g0251700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049573.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94994.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.592023632974969 6.72456537747571 3.95357912865147e-05 0.000884043771483295 10.6086356848238 8.86023248184465 0.592023632974969 0.0620568045405037 AT5G27220_at 1.08738452530051 1.13969016476634 1.42010271595083 1.91168567745784 2.15021733649106 1.63786645257404 1.1078213210969 1.2284431651838 0.718895736066207 1.61480136174087 1.80584206256754 2.33294222005659 2.23954032345129 2.50853153515646 1.73894214475631 2.20102119784115 2.21927090992958 2.50315879126354 1.71001694806198 0.212733781472038 0.216278466130078 0.219219163707061 0.212321081503785 0.212321081503785 0.21688509919811 0.212321081503785 0.216314188617366 0.225611798002714 0.21292946939801 0.215121767241206 0.21681544080998 0.220169485363410 0.230143900535345 0.213787233786348 0.217240717516702 0.213143719983875 0.225881193530517 0.217080986431254 5 5 + 9581970 9582715 9582447.727 9578760 9582755 + gene protein_coding_gene TRUE TRUE AT5G27220.1 protein transport protein-related similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to hypothetical protein MCAP_0860 [Mycoplasma capricolum subsp. capricolum ATCC 27343] (GB:YP_424802.1); contains InterPro domain Frigida-like; (InterPro:IPR012474); contains InterPro domain t-snare; (InterPro:IPR010989) 0.742442358851506 6.72215968890417 3.9659468042025e-05 0.000885872240720266 10.6055701234873 3.23118183489474 0.742442358851506 0.124964490509244 AT5G04950_at 8.24577354987886 8.62673952213957 10.2415339024439 10.3646959935635 9.82315416019203 9.9568206164707 10.9737205407500 11.1092294381625 6.49497930388835 9.92822142719547 9.56694373107024 7.187972085718 9.7788970292759 9.73265923226256 6.7399109687325 9.26624985688481 10.7346120906413 9.90531313582163 8.26928484324453 0.168201468750956 0.168428276790589 0.166152105459566 0.164058853288580 0.160923954505578 0.164649297329043 0.170888931707314 0.160873007844831 0.222991332873385 0.168955821790492 0.163052252147292 0.176769585206303 0.162741468385728 0.165958173276427 0.200259730497087 0.164305313178767 0.161632765132129 0.168754224955828 0.188105396819408 5 5 - 1457931 1458439 1458143.091 1457646 1458891 - gene protein_coding_gene TRUE TRUE AT5G04950.1 nicotianamine synthase, putative Identical to Nicotianamine synthase 1 (EC 2.5.1.43) (S-adenosyl-L-methionine:S- adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3- carboxypropyltransferase 1) (AtNAS1) (NAS1) [Arabidopsis Thaliana] (GB:Q9FF79;GB:Q9ZWF8); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT5G56080.1); similar to nicotianamine synthase [Thlaspi caerulescens] (GB:CAC82913.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) 0.620463323479786 6.72194136414202 3.96707127145689e-05 0.000885872240720266 10.6052918715790 18.5901576109886 0.620463323479786 0.0767187366513553 AT5G67240_at 5.52397013097878 5.37746213522047 6.22668715008309 6.49807296502315 6.81047794135743 6.02735234409131 5.89963988281234 5.429276438855 5.01945283641645 5.36467545844241 6.07476928221327 6.6642048830865 6.06382542687268 5.51236414675421 6.12614765072979 6.44259235014181 6.48229024516274 5.98977505804163 5.39297627537156 0.227316985057438 0.217439886526354 0.221356064124583 0.213426102572925 0.217564741936582 0.227417318224493 0.212316236572371 0.212691723500617 0.224954125724259 0.219388426205170 0.215767969689764 0.216023015461234 0.217359353733097 0.222678355270217 0.231254344844186 0.219301649533706 0.222126767988939 0.213385957897905 0.214887262080722 5 5|0 -|/ 26841680 26842356 26841960.7 26841462 26845396 - gene protein_coding_gene TRUE TRUE AT5G67240.1 exonuclease similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 0.87176086340198 6.72178323678501 3.96788590997584e-05 0.000885872240720266 10.6050903361386 11.6883828671121 0.87176086340198 0.166855778579177 AT5G17410_at 2.06860204727682 2.12390029038741 2.81401967781328 2.80061898598922 4.14023547512529 3.27226072468147 2.8634212083937 2.26128938279933 2.70705547882813 2.78990520524813 4.1662264635911 3.98657568027844 4.03365460599267 3.56360397706131 3.87408473743164 3.83044815377270 3.11112661778951 3.62078443008475 3.05159264078222 0.235590932021389 0.231008493975086 0.236078001930065 0.232291821051387 0.237135309645156 0.258379655653183 0.245446052140650 0.233489903185973 0.243284148161962 0.238167169926104 0.231051377887791 0.242422385239856 0.231137111706909 0.236348905052633 0.241335001427479 0.231008493975086 0.235090430286245 0.247169907370282 0.240601378744406 5 5 + 5734904 5736383 5735771.364 5730612 5736697 + gene protein_coding_gene TRUE TRUE AT5G17410.1|AT5G17410.2 tubulin family protein similar to SPC98 (SPINDLE POLE BODY COMPONENT 98) [Arabidopsis thaliana] (TAIR:AT5G06680.1); similar to H0311C03.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67553.1); similar to OSJNBa0029H02.26 [Oryza sativa (japonica cultivar-group)] (GB:CAE01638.1); similar to Os04g0501700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053231.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) 0.925637895992718 6.72132550675844 3.97024505166904e-05 0.000885942742696774 10.6045069327204 6.10445890315986 0.925637895992718 0.183076816299568 AT5G16780_at 7.32547711836452 7.4059435556656 7.78463382014778 7.82924294459594 8.44952652505076 8.12163278087449 7.01243193124706 6.94025696895352 7.32871984935841 7.42710662291527 7.37284601918828 7.85485803450111 7.35340359283619 7.73550458725626 7.11472769846404 7.83355645920757 7.67713655206633 7.65653336986883 7.06447093701693 0.160703893293594 0.161452653623962 0.162262122674409 0.163452650267785 0.165121409631856 0.163618805768674 0.170357409349693 0.165488439652382 0.168912081340772 0.16248537372038 0.16427026831647 0.159635829227749 0.164171334338128 0.159635829227749 0.17714046310284 0.159635829227749 0.169853862591878 0.164737757393824 0.163570458718456 5 5|0 -|/ 5517807 5518682 5518247.9 5517493 5522261 - gene protein_coding_gene TRUE TRUE AT5G16780.1 SART-1 family protein Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14700.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE84261.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE88274.1); contains InterPro domain SART-1 protein; (InterPro:IPR005011) 0.588309971759806 6.7188094385428 3.9832398277122e-05 0.000888385246394316 10.6012995178885 15.0327698350810 0.588309971759806 0.0602439933237565 AT5G54680_at 9.29586150987987 9.60126727608705 10.17729287931 10.3811666454753 10.4343178370483 10.2753084451560 9.5346187802096 10.0423554642235 9.57337300851654 9.47981923142565 10.2504682924982 10.2110814617221 10.2015839394599 10.2531749352283 10.1716992308348 10.3837276518315 10.0174443433000 10.1264753352918 9.41590426087764 0.122689833724729 0.123905173334291 0.125545139267840 0.118640442710933 0.124145189635320 0.124601576535093 0.121383883387513 0.119966469746759 0.123498185258719 0.129179499324752 0.122586969594860 0.116891840062016 0.117128916987085 0.129067527874061 0.123419941499831 0.121479801947853 0.126435506721486 0.127955648296056 0.128168819922321 5 0|5 /|+ 22235572 22236181 22235987.7 22234281 22236500 + gene protein_coding_gene TRUE TRUE AT5G54680.1 ILR3 (IAA-LEUCINE RESISTANT3); DNA binding / transcription factor similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G51070.1); similar to Prefoldin; Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE93168.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.705376879655833 6.71742538872315 3.99040753874734e-05 0.000889526291613572 10.5995347793057 19.8136014708624 0.705376879655833 0.111873880325097 AT5G43980_at 2.99842633312971 3.07887816950434 3.77241232645736 3.89116919654108 4.93182716365672 4.18792895997340 3.95783447897780 3.21330456572592 3.34109267958695 3.56390271363436 4.14362256898791 4.34668178432367 4.35602483563426 4.62520825629166 4.33088833701968 4.56584738045246 4.17797270733026 3.8582327194859 3.08635963955664 0.244715301523363 0.237010307955589 0.250117015931992 0.249959870455157 0.244160363489215 0.266696609568766 0.237010307955589 0.240875599055707 0.242226589118540 0.241305285973796 0.238423886512666 0.237010307955589 0.238540116077074 0.238174927147881 0.239521932327816 0.242404734144612 0.245262877533808 0.239975208193342 0.241326774140501 5 5 - 17712916 17713454 17713260.727 17711907 17713849 - gene protein_coding_gene TRUE TRUE AT5G43980.1 receptor-like protein kinase-related similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G33330.1); similar to Protein of unknown function DUF26 [Medicago truncatula] (GB:ABE92040.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 0.926915835460388 6.71238893160577 4.01660758128204e-05 0.000894906598045513 10.5931106876580 7.56947839988748 0.926915835460388 0.183819982034833 AT5G59770_at 7.10910127883106 7.16900204749124 8.60230105861706 8.10245385471057 8.50316339276404 8.06712973148574 8.21974896747306 7.9277552011262 7.35004052701544 7.15885376690551 7.69680959827337 7.58601276942281 8.20029079213914 8.09410446005579 7.82205564472662 8.17203586463327 7.64465352285039 8.02322171348482 6.88459226761742 0.164293726209091 0.175471545459876 0.174836896784782 0.178537318325238 0.168490710136128 0.162270061909761 0.171708659551454 0.169183498500626 0.177694360124661 0.182537759582472 0.169270559523927 0.160802706727164 0.162102227611606 0.160840858982510 0.163972619336886 0.160770937570689 0.172519368931070 0.16318938079469 0.181688713484118 5 5|0 -|/ 24096827 24098374 24097909.222 24096618 24098442 - gene protein_coding_gene TRUE TRUE AT5G59770.1 similar to PAS2 (PASTICCINO 2) [Arabidopsis thaliana] (TAIR:AT5G10480.2); similar to Protein tyrosine phosphatase-like protein, PTPLA [Medicago truncatula] (GB:ABE85916.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482) 0.743047997091393 6.70472590551455 4.05682661295003e-05 0.000903403226690323 10.5833293278817 15.4806120580012 0.743047997091393 0.125845494627863 AT5G13280_at 6.11403734547455 6.07726570143882 6.15912191797318 6.21886871326804 6.52230297890006 6.58773208607177 5.94750634747357 6.32719833335294 5.7023550575601 6.2748473333849 7.08411002272567 7.82032189785597 6.81906398141799 6.8818970693485 7.44686918362043 6.68599878000207 6.47692129638174 6.9024466903686 6.22922003969284 0.203413582341175 0.205673824087685 0.206728171287351 0.205061088144061 0.208948927829646 0.225856040405695 0.211289702024059 0.205894258135598 0.23742596772207 0.203701117496632 0.207579686754370 0.205727919668698 0.205323916752561 0.220595451849667 0.205218992315428 0.205339080126182 0.225634695110600 0.219065584605972 0.202374604179868 5 5|0 +|/ 4251590 4252617 4252212.2 4249441 4252839 + gene protein_coding_gene TRUE TRUE AT5G13280.1 AK-LYS1 (ASPARTATE KINASE 1) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH). Identical to Aspartokinase 1, chloroplast precursor (EC 2.7.2.4) (Aspartate kinase 1) (AK1) [Arabidopsis Thaliana] (GB:Q9LYU8;GB:O23152); similar to CARAB-AK-LYS (Lysine-sensitive aspartate kinase), amino acid binding / aspartate kinase [Arabidopsis thaliana] (TAIR:AT5G14060.2); similar to aspartate kinase, lysine-sensitive, putative [Arabidopsis thaliana] (TAIR:AT3G02020.1); similar to putative aspartate kinase [Oryza sativa (japonica cultivar-group)] (GB:AAO20063.1); similar to putative precursor monofunctional aspartokinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84902.1); similar to precursor monofunctional aspartokinase [Glycine max] (GB:AAD41796.1); contains InterPro domain Aspartate kinase region; (InterPro:IPR001341); contains InterPro domain Aspartate/glutamate/uridylate kinase; (InterPro:IPR001048); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain Aspartate kinase; (InterPro:IPR012150) 0.600700315227067 6.70290332162336 4.06645594759151e-05 0.000904775783812654 10.5810016669959 12.7860097240413 0.600700315227067 0.0677722377390561 AT5G14390_at 4.93453919256546 5.21794461227422 5.2164254497083 5.18900220163382 6.49695877990177 6.24221525935652 4.95610634515976 4.84052677982447 4.92465942536431 5.09622789395653 5.74739606998839 5.52636287174987 5.69506339324937 5.34039861816618 5.63451957790699 5.82077732349661 5.7514571497405 5.7985904455259 5.749463039855 0.225811402116216 0.223054436233003 0.225850227172509 0.227454210467737 0.228009383493946 0.235095643473921 0.218762142746235 0.222125545413111 0.235228861411105 0.223461996999861 0.225701252131043 0.216821484189944 0.221166210660601 0.231655132242334 0.219141668584705 0.217278083584805 0.218577379473189 0.21640325061099 0.231593063474900 5 5|0 -|/ 4637625 4638142 4637861.8 4637315 4639759 - gene protein_coding_gene TRUE TRUE AT5G14390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01690.1); similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABD32255.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.603204209181743 6.70276952382972 4.06716381453615e-05 0.000904775783812654 10.5808307720421 10.8472668946963 0.603204209181743 0.069075384956375 AT5G49470_at 5.47227186103836 5.25030003975365 6.15075297094916 6.1047787621977 6.41823331347569 6.3791277611608 5.84947515395041 5.24493875068661 5.75523655061999 5.26604033505224 6.18621308511116 6.07763124191901 5.67744990406109 6.41077612477149 5.73077075896839 6.24415804619711 6.05349323641935 6.33542951125251 5.45579769211125 0.211549499086394 0.203327446723385 0.208503900179894 0.204002364704916 0.204580070778118 0.211578820274354 0.213497932083707 0.209012309225803 0.221427483839734 0.216657995255728 0.205961307425567 0.210644682757918 0.206337982641613 0.213308912980134 0.205363292171015 0.203327446723385 0.212357115473493 0.204196602621112 0.207530123884229 5 5|0 +|/ 20083159 20084725 20084127.875 20080674 20085891 + gene protein_coding_gene TRUE TRUE AT5G49470.1|AT5G49470.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67890.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06640.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06620.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98953.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67890.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06630.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06620.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98953.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PAS fold; (InterPro:IPR013767) 0.7030543982908 6.69372432850071 4.11532660327472e-05 0.000915020530863442 10.5692716740730 11.6496590422426 0.7030543982908 0.111935553685494 AT5G50210_at 8.57221414153635 8.73180909195553 9.35239481406268 9.34076635302291 9.49827246463955 9.3034478402244 9.59384014295783 9.54372486794896 9.00633165012718 9.19047894330121 9.94212956677035 9.8864690324638 9.92012671784089 9.87219764094235 9.64352263651831 10.1293600115958 10.0537049001709 10.0338565054629 9.03288274243254 0.121217976907633 0.116651429490047 0.119765503281127 0.115877603983819 0.118714253568746 0.125205645090967 0.121514757907119 0.114054944458595 0.136088681462747 0.124100157185615 0.115895663385918 0.115211134155055 0.117517189363012 0.121488457105764 0.117553677679867 0.116190961651268 0.120851849859981 0.121907567077366 0.127940491575552 5 5 + 20462254 20462879 20462553.727 20459873 20463217 + gene protein_coding_gene TRUE TRUE AT5G50210.1 QS (QUINOLINATE SYNTHASE); quinolinate synthetase A Quinolinate synthase (QS) activity of At5g50210 has been demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. similar to Fe-S metabolism associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G67810.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA97161.1); contains InterPro domain Quinolinate synthetase A; (InterPro:IPR003473); contains InterPro domain Fe-S metabolism associated SufE; (InterPro:IPR003808) 0.560964869035696 6.68428497484204 4.16624257709074e-05 0.000925866617858658 10.5571962420709 18.7479263754223 0.560964869035696 0.0444834461336548 AT5G24670_at 9.11500138041367 8.80355406666373 9.81151879607513 9.58171989440211 9.94716374127133 9.53736936137795 8.36220499074188 8.04427795275845 8.92422224897276 8.96084596542478 9.4991153997144 9.26155375556934 9.3893632377077 9.38130320987011 9.02698596148237 9.73311315400385 9.02665136611937 9.36683061607705 9.32432756592179 0.119304816980631 0.117101905713161 0.117843882574360 0.118779619993498 0.118685850047580 0.121336233438142 0.119247905911217 0.118969141984626 0.120698608567328 0.121339967670462 0.114262619780972 0.114408599987039 0.117133563764080 0.115481816670653 0.118258539417027 0.114199221769472 0.126679440045979 0.118554479172509 0.116971153083723 5 5 + 8450353 8451004 8450618.364 8448100 8451221 + gene protein_coding_gene TRUE TRUE AT5G24670.1 hydrolase/ zinc ion binding similar to Os09g0128600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062614.1); similar to Subunit of tRNA-specific adenosine-34 deaminase (ISS) [Ostreococcus tauri] (GB:CAL53029.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125) 0.701999672382724 6.68218283016999 4.17767350088297e-05 0.00092793130069577 10.5545052854976 18.3530578634669 0.701999672382724 0.111994047424137 AT5G19380_at 3.79327265152998 3.71848432387851 4.35689834617401 4.08753220103764 4.52266580697633 4.03707080622851 3.47564754010284 3.43142697130269 3.36746178030394 3.72294380118002 4.67385010368958 4.26964757400826 4.03804609833531 4.07622414678952 3.90497015145227 4.19733409672081 3.97016729288709 4.13130277329376 3.3390439936999 0.232984469602338 0.227368553995741 0.234076954422412 0.227495975579266 0.227090859184175 0.227443256540814 0.227399678627336 0.232633296331921 0.232104216751109 0.229086184073948 0.242242497028052 0.2265225632834 0.223953368535092 0.227647979753896 0.230924510250082 0.222048304670065 0.233910173816993 0.231332451096096 0.234906705812185 5 5|0 -|/ 6527036 6528141 6527397 6526827 6530594 - gene protein_coding_gene TRUE TRUE AT5G19380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12170.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE77682.1) 0.66377175315987 6.68075195745223 4.18547349934907e-05 0.000929187792743524 10.5526732582761 7.74496281659133 0.66377175315987 0.0972667862799537 AT5G24540_at 1.51669360417108 1.57717313778181 3.51005862168457 3.97843138717223 1.75905547382424 1.48749234964345 0.869322003788294 1.28298533753692 1.39847409169689 0.942703832210067 1.11251207441247 1.09121339408333 1.21967968357623 1.05562090461416 1.49202650488366 0.732139280644392 1.3680957403306 1.12481159450453 0.90935297156321 0.214993021980598 0.213341566236920 0.231883898757268 0.252450429472365 0.212564912171988 0.216590663693947 0.216374949757073 0.214852886997859 0.224558050352414 0.215651984996421 0.223175241536689 0.211533608469126 0.229388683849687 0.211533608469126 0.215721829837302 0.213674049321542 0.211584962302477 0.213699609318775 0.211533608469126 5 5|0 -|/ 8384885 8385851 8385322.9 8384879 8388030 - gene protein_coding_gene TRUE TRUE AT5G24540.1 glycosyl hydrolase family 1 protein similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G24550.1); similar to DIN2 (DARK INDUCIBLE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G60140.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44460.1); similar to Glycoside hydrolase, family 1 [Medicago truncatula] (GB:ABE85996.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.719109017951357 6.6789787886513 4.19516115241958e-05 0.000930861849293383 10.5504025583588 3.11416283726094 0.719109017951357 0.118374286271395 AT5G56340_at 5.66455981917728 6.28772332226662 7.04794999389814 7.27336360370536 7.7343807085364 6.38601953957882 5.37655441961078 6.2031353487036 4.93746089458006 5.70015819147717 7.69084691037377 7.38969377917781 7.22940856274208 6.57427242301097 6.40493004244857 7.03469057308248 5.59127065840204 6.25591348708749 5.40036012229432 0.309195379068936 0.302863401583403 0.306384176129561 0.317540973697894 0.320241161313218 0.323375767616481 0.304906687421357 0.310080495641005 0.336533028987355 0.308848686345571 0.318402181109972 0.305338057707309 0.302316712142538 0.341550284540971 0.311403462150955 0.306186101441229 0.315780672584224 0.319455405853465 0.309224416823073 5 5 + 22836088 22836640 22836354.727 22834786 22836883 + gene protein_coding_gene TRUE TRUE AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G26400.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89147.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.32641023454012 6.6666801927717 4.26302104610755e-05 0.00094543539517134 10.5346405695099 12.5553965314302 1.32641023454012 0.296750044297847 AT5G18410_at 6.31841054923069 6.67667847261426 6.0535100197585 6.29840757316389 7.4629988722022 7.13224604991068 6.71466350758299 6.82991534971662 6.9714818652413 6.7657464232264 8.30533007124913 8.86930311448687 8.2087403694029 8.1811724446867 8.48189422717191 8.30472431872632 7.13092415760541 8.22124612193456 7.24670473172533 0.220810570056581 0.208627351987233 0.224230400862261 0.223958229540947 0.212713418492085 0.223426319234330 0.216761616434493 0.214464942817557 0.217075772351981 0.208507270915574 0.210414257145287 0.208942552387979 0.208607336190612 0.210012742530064 0.219338477950452 0.208507270915574 0.236607494022996 0.217228767094544 0.21139036720794 5 5 - 6097464 6098159 6097765.545 6097293 6104982 - gene protein_coding_gene TRUE TRUE AT5G18410.1|AT5G18410.2 KLK (KLUNKER); transcriptional activator|KLK (KLUNKER) distorted trichomes and exhibits a diffuse actin cytoskeleton similar to PIROGI, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93934.1); similar to Cytoplasmic fra (GB:ABE90372.1); similar to Os03g0143800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048941.1); contains InterPro domain Cytoplasmic fragile X mental retardation protein interacting protein; (InterPro:IPR008081); contains InterPro domain t-snare; (InterPro:IPR010989) 0.660073086033157 6.66226518427389 4.28766869671763e-05 0.00095041550441153 10.5289769034156 14.2896343958836 0.660073086033157 0.096509768926451 AT5G45050_at 5.3772904029337 5.38461542423926 6.0362040743212 5.94036670789512 6.24697652009475 6.18571101658984 5.03785241882165 5.25952946942153 5.60686417513280 5.39506755885404 6.12122111860182 6.02551417123927 5.79294100755592 6.00077097934194 5.64554374883269 6.01617163935655 5.69574245559161 6.07878260680025 5.93305748885805 0.189127457355334 0.178091103371671 0.185001187568906 0.180062653225106 0.180977481773755 0.182668934611311 0.178982457516259 0.183690636652009 0.212506531529219 0.179750447944769 0.188666239992757 0.190064687578670 0.179500590551285 0.178091103371671 0.182350829361014 0.19295652141188 0.185383200707541 0.184030096578113 0.18312911076204 5 5 - 18194319 18194883 18194543.091 18194141 18199032 - gene protein_coding_gene TRUE TRUE AT5G45050.1|AT5G45050.2 TTR1 (WRKY domain family protein 16); transcription factor Encodes a member of WRKY Transcription Factor (Group II-e) that confers resistance to tobacco ringspot nepovirus. Identical to Probable WRKY transcription factor 16 (WRKY DNA-binding protein 16) (WRKY16) [Arabidopsis Thaliana] (GB:Q9FL92); similar to SLH1 (sensitive to low humidity 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81441.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable WRKY transcription factor 16 (WRKY DNA-binding protein 16) (WRKY16) [Arabidopsis Thaliana] (GB:Q9FL92); similar to SLH1 (sensitive to low humidity 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.557291104585615 6.66164568656938 4.29113939894097e-05 0.000950698786733487 10.5281819723461 11.4671094410546 0.557291104585615 0.0431363295614285 AT5G20140_at 7.74548015049453 7.66904869557525 8.36713540372034 8.40732386822312 8.46075603279845 8.15479699121241 8.67100764701355 8.40646717522045 7.95186825886585 8.33977603749937 9.25993842989926 9.17688186341222 9.19686682411694 8.70810040506388 9.14827534587202 9.21051522175211 8.91961590081544 8.98763375899073 7.98392745860155 0.193398090585078 0.184189571632389 0.176238494791637 0.163306318476948 0.169878192684771 0.179066421364849 0.165500058616259 0.171231431783181 0.186633874011478 0.166834181720221 0.178910014974105 0.170927991965272 0.172692530155592 0.187726062323790 0.171259169032369 0.172187582501908 0.178086564254756 0.171150115669471 0.176122848577593 5 5|0 -|/ 6799315 6799878 6799656 6798834 6800905 - gene protein_coding_gene TRUE TRUE AT5G20140.1 SOUL heme-binding family protein similar to SOUL heme-binding family protein [Arabidopsis thaliana] (TAIR:AT3G10130.1); similar to SOUL heme-binding protein-like [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53297.1); similar to Os06g0597900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057992.1); contains InterPro domain SOUL heme-binding protein; (InterPro:IPR006917) 0.604311686998687 6.66070646314993 4.29640710722562e-05 0.00095137970173888 10.5269766673058 16.8191698557302 0.604311686998687 0.0715721696112107 AT5G61020_at 7.25456576763582 6.77048107108457 7.57144548644946 7.21527446286201 6.35538372555711 7.08856784649633 6.24693999269814 6.73746328423604 5.02840359646253 5.62100557237201 7.04952091314693 7.68889664114747 6.6186563911223 6.95495652841003 7.3369040314009 6.6092793567751 6.93777560672955 6.00524616110618 5.43124259383655 0.189334784970852 0.18926514305812 0.192306875777271 0.192404624204219 0.189131532119306 0.193355639883091 0.196958163561022 0.193934031274486 0.195388033960447 0.189631473981309 0.197764607336386 0.202973872244602 0.189235544676397 0.187024874946672 0.196034452639446 0.191781050331864 0.196672490053348 0.200198617013596 0.191752036744372 5 5|0 -|/ 24574713 24575537 24575012.6 24574427 24577105 - gene protein_coding_gene TRUE TRUE AT5G61020.1|AT5G61020.2 ECT3 (evolutionary conserved C-terminal 3) similar to ECT2 [Arabidopsis thaliana] (TAIR:AT3G13460.4); similar to YT521-B-like protein [Medicago truncatula] (GB:ABE87461.1); contains InterPro domain YT521-B-like protein; (InterPro:IPR007275) 0.92262127546685 6.65941553016814 4.30365874978841e-05 0.000952499012024363 10.5253198045407 13.0352010586042 0.92262127546685 0.184720581720575 AT5G63930_at 3.33438545143243 3.39108004347023 3.27075637995339 3.64218792607479 4.13143196983731 3.9240818860368 2.39398850746285 2.77426554856232 3.45544734078072 3.14779181927077 3.61914782475192 4.17015144825796 4.20362173932311 4.01510233113003 3.79884878528964 4.48958593770049 3.45950008701046 3.84485485969724 3.5547028573361 0.217165358278554 0.207846347333132 0.204441143276260 0.210773672690054 0.203634442632150 0.21171270475175 0.218369485173294 0.205759106771275 0.224368395674099 0.208617113129466 0.203813356703467 0.211187501474242 0.203634442632150 0.212844966302463 0.207452921231663 0.207833624341021 0.208613687556312 0.205194277749545 0.205070749866001 5 5 + 25602956 25603501 25603221.545 25600232 25603725 + gene protein_coding_gene TRUE TRUE AT5G63930.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G33170.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G34110.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G17230.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to Receptor-like protein kinase precursor (GB:P93194); similar to putative LRR receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84715.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.666402803463094 6.65827004707318 4.31010436211006e-05 0.000953438878077413 10.5238494184962 7.02581336365758 0.666402803463094 0.0992284570420732 AT5G05180_at 1.80997598899453 1.91346605299182 2.30957134315959 2.16221202372562 2.11451967162378 2.33902681128959 2.1528233795723 1.85047089387890 2.32405037035133 2.41073453763416 3.41346865729789 3.45584309028941 2.77940803587882 3.31485089422268 3.93542199993659 3.07092384065601 2.59758135871163 3.11070736237212 2.16171488487291 0.196504806913875 0.201141443544322 0.198898152483715 0.205390886844884 0.196197011287074 0.196197011287074 0.196197011287074 0.198713334062814 0.196197011287074 0.202499039901550 0.202263127293848 0.201020967176605 0.197402920185745 0.198897843646566 0.209546770853907 0.197003601615785 0.201342113676684 0.200748365011135 0.200082444474390 5 5 + 1537801 1538285 1538077.182 1536227 1538493 + gene protein_coding_gene TRUE TRUE AT5G05180.1|AT5G05180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10880.1); similar to Os05g0168800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054757.1); similar to Os01g0168100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042126.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE94140.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10880.1); similar to Os05g0168800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054757.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE94140.1) 0.605295387112383 6.65693392445359 4.31763581062560e-05 0.000954617861083843 10.5221340795075 4.8358127302579 0.605295387112383 0.0722377188770191 AT5G63000_at 5.78306951848429 5.75253139927601 6.41869280870987 6.17338179796031 6.51378563146492 6.19384619515736 5.82045906996154 5.73325132885356 5.46734873793802 5.58917066710776 5.8730727935031 6.55270670320395 6.11489565769374 6.27264977801996 6.42831694835164 5.96434216784894 5.60749727286893 6.07255514307682 5.31018250553197 0.170227956079086 0.167723454551374 0.171451903011854 0.172565887968489 0.162357815598198 0.171131741329256 0.162314080798079 0.164786166086711 0.173959764127658 0.168327284997589 0.163672971723714 0.164216850118566 0.16499919985041 0.167111429990158 0.161530925596128 0.161530925596128 0.179451914013438 0.162046652560272 0.172460967752221 5 5|0 -|/ 25297395 25297958 25297682.333 25297238 25298759 - gene protein_coding_gene TRUE TRUE AT5G63000.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57827.1); similar to Os01g0271000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042705.1) 0.603893016862117 6.65596819147189 4.3230882541521e-05 0.000955336214049563 10.520894092188 11.8317881495319 0.603893016862117 0.071577823503832 AT5G52890_at 3.71605615318238 4.02286181050994 5.67217310302468 5.54750573141609 4.61267926116989 4.88996559813635 3.63640367807561 4.13380563861709 4.17388938311674 3.38397839615116 3.99361957557146 4.19140633015788 3.63264827710135 3.48524506179316 4.21623149487847 4.51449353387369 4.00282641090415 3.71480872048651 4.03310021290887 0.253690619300549 0.246160429111929 0.245639295356370 0.260055300003961 0.245318852228595 0.26893231206968 0.256798230667388 0.248165832057779 0.245318852228595 0.254430509417702 0.256860962895401 0.246798725775164 0.253055637340344 0.264482683604437 0.245318852228595 0.252623988045178 0.250931659418483 0.255444924178011 0.245318852228595 5 5 - 21462286 21462817 21462537.375 21462061 21464466 - gene protein_coding_gene TRUE TRUE AT5G52890.1 AT hook motif-containing protein similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT4G21900.1) 0.704276515772037 6.65235542936219 4.34355130437623e-05 0.00095936925921164 10.5162541560919 8.44521433326055 0.704276515772037 0.114001930393057 AT5G46390_at 8.38339753273423 8.04335505698138 8.98391338571595 8.77016047915628 9.1458438041798 8.83361467994398 8.68246444875066 8.55142661822086 8.363015148586 8.03609585682928 9.04942904667724 8.83098065163011 8.96034534944105 9.10066880738054 9.06285922568954 9.1423247280347 8.95950264186198 8.89396833660247 8.28764640945523 0.130127706424641 0.133535720483674 0.134196132908752 0.137568282786515 0.131413045341805 0.136498809026827 0.132916995833150 0.134525208836798 0.142596819901199 0.145646327565180 0.130762011903736 0.129578401504595 0.129430715070108 0.132778726877894 0.132557536238149 0.139525572451512 0.130063998765245 0.128667802733393 0.137295653891121 5 5|0 +|/ 18835111 18835945 18835526.333 18833831 18836574 + gene protein_coding_gene TRUE TRUE AT5G46390.1|AT5G46390.2 peptidase S41 family protein similar to peptidase S41 family protein [Arabidopsis thaliana] (TAIR:AT3G57680.1); similar to Peptidase S41 [Medicago truncatula] (GB:ABE79831.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S41; (InterPro:IPR005151)|similar to peptidase S41 family protein [Arabidopsis thaliana] (TAIR:AT3G57680.1); similar to D1 protease-like protein precursor [Nicotiana plumba (GB:AAL99045.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S41; (InterPro:IPR005151); contains InterPro domain Peptidase S41A, C-terminal protease; (InterPro:IPR004447) 0.644656441600877 6.6422413778624 4.40139392804726e-05 0.0009716500982339 10.5032544087367 17.2887364940628 0.644656441600877 0.090911715824041 AT5G62790_at 10.5625654296428 10.3735087513527 11.1944567698293 11.1677299103949 11.4240853570006 11.0511780513384 11.2348098272183 10.9868325936425 10.5509432102457 10.7633105196448 11.4030876797422 11.4723663012858 11.3980568366226 11.4528858084019 11.5409286668598 11.7553699250589 11.4567306781213 11.4918769791532 10.6590163403415 0.0706139610877738 0.0687468524594042 0.0687831835453656 0.0704364970769478 0.0699787867483155 0.0757107264331714 0.0695829275901288 0.0710731962520075 0.0773524104883122 0.0709837327821108 0.072074522842362 0.0687468524594042 0.0705828311527249 0.0687468524594042 0.0747473202967576 0.0687468524594042 0.0756439929655792 0.0713776273193895 0.0700285678599287 5 0|5 /|- 25231606 25232363 25232035 25231351 25234665 - gene protein_coding_gene TRUE TRUE AT5G62790.1 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype. Identical to 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) (DXR) [Arabidopsis Thaliana] (GB:Q9XFS9;GB:Q9M6U2); similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis] (GB:ABD92702.1); similar to 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Lycopersicon esculentum] (GB:AAK96063.2); similar to 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Picrorhiza kurrooa] (GB:ABC74566.1); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; (InterPro:IPR013512); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase; (InterPro:IPR003821); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; (InterPro:IPR013644) 0.629294770502575 6.64135579804462 4.40649785985512e-05 0.00097228178850791 10.5021154512113 22.0764806110439 0.629294770502575 0.0842492454143623 AT5G58550_at 2.21932367296882 2.19679445191163 2.77933393555871 2.35626962581735 2.47689291980452 2.97868161674792 2.56769247195590 2.20035575044026 1.87223962406242 2.02334014379339 3.17272365613305 3.42397736920260 3.17623016028027 2.91497028253535 3.37969558679253 3.32833222642892 3.11909934775658 3.33607797131622 2.36704131682793 0.187204697455538 0.183738582097685 0.184614155455859 0.188989961938038 0.186027189402973 0.188719509113243 0.187932037997702 0.193187902612235 0.185638533600043 0.185448172330539 0.187380990384602 0.188727692000263 0.189818829425192 0.189514722336401 0.185100122277854 0.18833708317221 0.194346437558683 0.183145261715629 0.189520155865201 5 5|0 -|/ 23682693 23683402 23683020.444 23682521 23685700 - gene protein_coding_gene TRUE TRUE AT5G58550.1 EOL2 (ETO1-LIKE 2); binding / protein binding Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL2 also interacts with and inhibits the activity of ACS5. Identical to ETO1-like protein 2 (Ethylene overproducer 1-like protein 2) (EOL2) [Arabidopsis Thaliana] (GB:Q9LV01;GB:Q6PWY1); similar to ETO1 (ETHYLENE OVERPRODUCER 1) [Arabidopsis thaliana] (TAIR:AT3G51770.2); similar to EOL1 (ETO1-LIKE 1), binding [Arabidopsis thaliana] (TAIR:AT4G02680.1); similar to TPR Domain, putative [Medicago truncatula] (GB:ABE91127.1); similar to ethylene overproducer-like 1 [Lycopersicon esculentum] (GB:AAZ08351.1); similar to ETO1-like protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94447.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain BTB; (InterPro:IPR000210) 0.747800450578706 6.6342254818648 4.44782507924152e-05 0.000980901340823246 10.4929408876695 5.13138239895911 0.747800450578706 0.130219367222386 AT5G16210_at 7.22460078104727 6.89475113517083 7.61061201351019 7.70696098357848 8.14889891915341 7.36352252758598 7.11269973697664 6.63802627711768 7.23368956462575 6.9340708595494 8.34216114835824 8.44057240754644 7.92040887311214 8.41706650360472 7.90382732125303 8.12705063089701 7.3698389734365 8.14338420767582 7.08742600436655 0.184452948551707 0.177081937674616 0.186229599088365 0.177997602334791 0.183142169516166 0.194373064376869 0.176217418393056 0.174445627991178 0.183022636743026 0.181740274884094 0.171394501055984 0.179910222983635 0.181749124010933 0.181694212925745 0.182329380093067 0.174710995670300 0.184959286340853 0.179618013011773 0.187135114978895 5 5 - 5291113 5291654 5291365.273 5290870 5297977 - gene protein_coding_gene TRUE TRUE AT5G16210.1 HEAT repeat-containing protein similar to Os01g0514300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043188.1); similar to Unknown (protein for MGC:146562) [Xenopus tropicalis] (GB:AAI24572.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594); contains InterPro domain HEAT; (InterPro:IPR000357) 0.868977871883585 6.63242983785428 4.45829812948995e-05 0.00098271116243413 10.4906292701682 14.9215594973089 0.868977871883585 0.169577225161591 AT5G48400_at 3.11446538136245 3.48666431314169 5.06489880959287 5.68145843700479 2.23576750552561 2.37698562417082 1.02390179844989 1.36299672104728 1.01977115288637 1.18198356928812 1.26885163333665 1.19430396142797 1.29078367666816 1.07527146767871 1.07331326943553 1.25669516047067 1.36053132898284 1.03127540817117 1.50274871690808 0.234674887596166 0.221514043054474 0.255623342290894 0.250098127497768 0.225508690183456 0.219695454663162 0.219695454663162 0.219695454663162 0.226700023707771 0.223961379303865 0.222729261859876 0.219695454663162 0.225437468205855 0.223429012608289 0.227794815481075 0.220969904447670 0.223496609956098 0.219695454663162 0.226106634541873 5 5|0 +|/ 19635801 19636414 19636132.6 19633470 19636472 + gene protein_coding_gene TRUE TRUE AT5G48400.1|AT5G48400.2 ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) (GLR1.2) [Arabidopsis Thaliana] (GB:Q9LV72;GB:Q8LGN3); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa (japonica cultivar-group)] (GB:BAD34106.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320)|Identical to Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) (GLR1.2) [Arabidopsis Thaliana] (GB:Q9LV72;GB:Q8LGN3); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.775907149575235 6.63027357364072 4.47090951661487e-05 0.00098499024378622 10.4878527891283 4.25774868276975 0.775907149575235 0.139907577744564 AT5G58110_at 9.42709225748998 9.6220284430763 10.1560966413042 10.1480083210692 10.3574026585992 10.0394139072818 8.99638477462332 9.25587489307235 8.56922812869855 9.02162813526256 9.51689202615978 9.3796051020045 9.5439353547740 9.44287311446002 8.83541852573816 9.6286841619627 9.39909062585922 9.0025181593283 9.29486599225148 0.170747864669947 0.170472089500186 0.175778969766511 0.174173180088530 0.173597714944389 0.195926895724182 0.167936741387865 0.165624599876578 0.184654906675498 0.167376255308589 0.1756536943389 0.167902830091451 0.164385870838262 0.171346537133075 0.180134183503628 0.168052987844470 0.193961460611002 0.185365843229412 0.165279817381575 5 5|0 +|/ 23532528 23533664 23533124.6 23532382 23533865 + gene protein_coding_gene TRUE TRUE AT5G58110.1 similar to Os02g0139100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045842.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55062.1); similar to Os06g0703800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058502.1); contains domain FAMILY NOT NAMED (PTHR13009) 0.615802502523208 6.62762758002313 4.48643759975083e-05 0.000987909263844013 10.4844447905916 18.9030550133262 0.615802502523208 0.0786433024950082 AT5G56750_at 4.29172569456185 4.41275883994347 5.36933591629162 5.1896213268431 6.65898190757362 5.70787116047758 5.14036088741412 4.15431654589531 4.77346770753336 4.20774986911262 6.70000859732462 5.68291966095065 5.60457587667614 5.27700125768181 5.23078422856202 5.64795386346771 4.671464949998 5.22190332425938 4.56548705281218 0.256225847912555 0.255979780409647 0.258365920610355 0.264787460914405 0.261962148340810 0.278464669845079 0.256465260752565 0.257814361348407 0.265128554803932 0.264283138977355 0.255979780409647 0.255979780409647 0.258949051874925 0.268467562439825 0.263044114447246 0.263192751808337 0.274018817050525 0.273163515214559 0.255979780409647 5 5|0 +|/ 22976837 22977765 22977509.556 22975103 22978142 + gene protein_coding_gene TRUE TRUE AT5G56750.1 Ndr family protein similar to Ndr family protein [Arabidopsis thaliana] (TAIR:AT2G19620.1); similar to SF21C1 [Helianthus annuus] (GB:ABB79742.1); contains InterPro domain Ndr; (InterPro:IPR004142) 1.11033517294422 6.62655112250593 4.49277139368365e-05 0.000988801774452749 10.4830580383949 10.1256938747173 1.11033517294422 0.240031338585353 AT5G57410_at 3.92077215567008 3.65559579131461 3.74233111552118 3.66978667815357 4.89583444414414 4.17373100952093 3.44521966185022 3.48393914625339 2.94171383473076 3.08322137162296 4.42779989923754 4.65651123675172 3.63058923110988 4.44220518945319 5.15756598236749 3.68379091361590 3.58993720569945 3.70124541191173 3.39596481311791 0.246864311529466 0.247871768420429 0.248149902821533 0.252765630180866 0.250800992911554 0.251871279857487 0.250402143487258 0.256232899837232 0.256025352250128 0.253145162201327 0.251160542099704 0.249732944539781 0.250046156710516 0.247695453019636 0.250685066505931 0.246864311529466 0.253012260583971 0.254781967162364 0.258271538555793 5 5|0 -|/ 23282449 23283496 23282926 23282122 23285097 - gene protein_coding_gene TRUE TRUE AT5G57410.1|AT5G57410.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18876.1); similar to hypothetical protein MtrDRAFT_AC135801g19v1 [Medicago truncatula] (GB:ABE82185.1); contains domain no description (G3D.1.20.5.170); contains domain SUBFAMILY NOT NAMED (PTHR21736:SF5); contains domain Cytochromes (SSF47175); contains domain FAMILY NOT NAMED (PTHR21736) 0.757472375170348 6.62537840267772 4.49968252476754e-05 0.000989820379507364 10.4815470837228 7.52415407043297 0.757472375170348 0.133881441802376 AT5G66440_at 4.85764741016058 4.98073143848666 4.89583045168124 5.00765682355652 4.58042166413282 5.2117880217204 3.74300504074224 3.80396119701849 3.85202472918260 3.49984751820714 4.60697813703011 4.95189492833137 4.30470315203791 4.09515585157189 4.90346600929131 4.31103262022084 4.04262493788492 4.29984564856128 3.5016011020301 0.204873133128552 0.211317265254800 0.209837505861294 0.210250091404770 0.206993269093935 0.218981444834756 0.212058009685968 0.203343373954738 0.212676043943982 0.211413622260176 0.210588626570644 0.209254161945821 0.204496151226497 0.209069384517974 0.204265377867548 0.207020130073211 0.215235733013147 0.202866950720274 0.211506961939277 5 5 - 26547503 26547984 26547789 26547461 26548323 - gene protein_coding_gene TRUE TRUE AT5G66440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34560.1); similar to hypothetical protein [Thellun (GB:ABB45849.1) 0.699613089740172 6.62161034577977 4.52196605479510e-05 0.000994217789447437 10.4766908914410 8.66377381114878 0.699613089740172 0.113478733076713 AT5G63990_at 3.91745279441959 4.40329400475387 4.04513696939654 4.13316463008969 3.43232253142093 3.52905343667363 2.39510957172502 2.75771306481527 2.31677069765406 2.42085999555546 3.35197221368181 3.76818518291189 2.65740028032188 3.09859349163086 3.8622168577542 3.31234786331955 3.08997007452475 3.59666711901715 2.44044258822231 0.231977593734389 0.217800319198780 0.227873885021675 0.219392301532565 0.218578045283491 0.232406214864215 0.216581709005125 0.224981598023451 0.232671070889877 0.222431528826598 0.216581709005125 0.220552635957524 0.216654211640325 0.227846943008843 0.231854344069061 0.223641055686986 0.224300681148024 0.218146121758009 0.222314291560181 5 5|0 +|/ 25632128 25632938 25632477.9 25630484 25633106 + gene protein_coding_gene TRUE TRUE AT5G63990.1|AT5G63990.2 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative Identical to Probable SAL3 phosphatase (3'(2'),5'-bisphosphate nucleotidase 3) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase 3) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 3) (IPPase 3) (SAL3) [Arabidopsis Thaliana] (GB:Q8GY63;GB:Q8L8N7;GB:Q9LVN5); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239)|Identical to Probable SAL3 phosphatase (3'(2'),5'-bisphosphate nucleotidase 3) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase 3) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 3) (IPPase 3) (SAL3) [Arabidopsis Thaliana] (GB:Q8GY63;GB:Q8L8N7;GB:Q9LVN5); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to Os12g0183200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066325.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.683002537275706 6.61844268352744 4.54079071685299e-05 0.000997850646509485 10.4726068749424 6.44408599001475 0.683002537275706 0.107325805903052 AT5G23580_at 4.80464316277448 4.77835776259377 5.83958634418819 5.74295424186002 4.74242422173309 5.68795667611193 4.1904585905884 4.44801885603346 4.45667357955804 4.39289724861078 5.28705983063715 5.48079841942415 4.6328574336623 5.27692683285742 4.76941135466452 5.23356806123223 4.472878315092 5.42453530003907 3.99403950062204 0.245937114135257 0.236798689562364 0.235553284970349 0.236770949705824 0.224186149267614 0.236856123096681 0.229237248366294 0.223870882344112 0.232863665112475 0.228178817290962 0.223870882344112 0.231327682764415 0.229517686433923 0.228886956459210 0.223870882344112 0.229881511408287 0.236701055347162 0.227986726179794 0.229266930920108 5 5|0 -|/ 7950402 7951142 7950770.3 7950205 7952535 - gene protein_coding_gene TRUE TRUE AT5G23580.1 CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9); calcium- and calmodulin-dependent protein kinase/ kinase unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+ similar to ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G35670.1); similar to CPK4 (calcium-dependent protein kinase 4), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G09570.1); similar to CPK1 (calcium-dependent protein kinase isoform AK1), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to calcium dependent protein kinase [Solanum tuberosum] (GB:BAB63464.1); similar to calcium-dependent protein kinase 1 [Vicia faba] (GB:AAV28169.1); similar to calcium-dependent protein kinase [Vitis labrusca x Vitis vinifera] (GB:AAR28766.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.8694558892483 6.61390663318613 4.56789414889419e-05 0.00100320233609979 10.4667560714718 9.70602892517611 0.8694558892483 0.170474005059182 AT5G53500_at 5.49736775704754 5.33034525220613 5.53545934769462 5.49193351451913 7.34295123186909 7.02572136008771 7.29688692725126 7.02785500828632 6.77964446624353 6.2930171203555 8.02246797169477 7.75428056348895 8.07250634211286 7.97806693167108 7.16868533506808 7.20318083597822 6.86161025420851 7.533647846804 6.15496108325301 0.205786736456001 0.213870416552255 0.211818826092064 0.207315715701762 0.205343313035318 0.220404272167529 0.204414977451066 0.202926648880898 0.208551169697579 0.202061698280633 0.205751639485386 0.20735236681317 0.200285683404897 0.215889780026651 0.203706538052711 0.200285683404897 0.205932659745025 0.206243351284030 0.203571870512823 5 5 - 21743395 21744010 21743627.818 21742667 21746526 - gene protein_coding_gene TRUE TRUE AT5G53500.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G24320.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.613000415427893 6.61359349659978 4.56977157978837e-05 0.00100320233609979 10.4663520630419 13.3103217082431 0.613000415427893 0.0779330270179513 AT5G57850_at 6.095517106506 5.83337458518227 6.4877979670745 6.40287646940928 6.58791559129794 6.72269367685744 6.11935415704924 6.12093597526032 5.43649883903522 5.97628302402323 6.761487674154 6.97907054469886 6.52077673600938 6.46728280406136 6.74483439322123 6.63469309105679 5.79946812877986 6.47318638667695 6.35026392047796 0.174512995102372 0.171421380062021 0.167885448614041 0.172533237284823 0.171981410863563 0.173748362916991 0.177098783716592 0.179269637686613 0.19538578897536 0.169062214657566 0.176506943956345 0.169266557543028 0.172123807169506 0.173041265243977 0.175104001410749 0.167885448614041 0.184529831919661 0.182467866984430 0.172064606989049 5 5 - 23452798 23453444 23453173.455 23452517 23454553 - gene protein_coding_gene TRUE TRUE AT5G57850.1 aminotransferase class IV family protein Identical to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8L493;GB:Q9FJM9); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT3G05190.1); similar to 4-amino-4-deoxychorismate lyase [Lycopersicon esculentum] (GB:AAT74744.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544) 0.567305089406915 6.61253309853847 4.57613542576902e-05 0.00100409099123687 10.4649838326365 12.5306158065852 0.567305089406915 0.0530852047664645 AT5G23150_at 3.63865925186065 3.43039808861872 3.56351369477134 3.99394754415272 4.77148518782032 4.38480601179741 3.18999956886981 2.64622066220182 3.72187505280332 3.07644370731254 3.83391386162698 4.18901080941033 3.78926518422636 3.54729486414711 3.93450747480941 4.29748447900197 4.33546771886961 3.9517139322964 3.33210336622716 0.240887995839459 0.235413428707195 0.243027532629236 0.239793291313235 0.240657883644197 0.245958816416812 0.235833769974565 0.236049838793907 0.235228140400723 0.233439937485816 0.238153508939644 0.234500666360772 0.232847384415901 0.236738033929875 0.246458506812332 0.237000120859584 0.240963760264698 0.232847384415901 0.234532992987277 5 5|0 +|/ 7791229 7792038 7791559.222 7785838 7792492 + gene protein_coding_gene TRUE TRUE AT5G23150.1 HUA2 (ENHANCER OF AG-4 2) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08230.1); similar to PWWP; Regulation of nuclear pre-mRNA protein [Medicago truncatula] (GB:ABE89069.1); similar to Putative PWWP domain-containing protein [Brassica oleracea] (GB:AAV25878.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain PWWP; (InterPro:IPR000313) 0.780071815924273 6.61073907406387 4.58692373112987e-05 0.00100594906671533 10.4626686316254 7.3831985842597 0.780071815924273 0.142059043587167 AT5G19840_at 3.13863483019578 2.4871887584234 4.01257483410817 3.86073162956647 4.24301481353213 3.86243810321761 3.21053402484752 2.84533814750131 2.34513528242457 2.27937832365383 2.59785731749674 2.60332617486354 2.93689655897376 3.06477911128464 2.687140138257 2.98402619005999 3.12458279521582 2.50571592397519 2.26030050295120 0.186405905230532 0.183611589813214 0.191859245897163 0.186946636386352 0.190993664118139 0.204773228409490 0.183016688971318 0.187448859550947 0.188667562800038 0.192227821066089 0.183016688971318 0.183016688971318 0.196629357951025 0.184920362410915 0.184109569192379 0.183528762849673 0.187554160104806 0.186894435962240 0.188485648209193 5 5|0 +|/ 6708067 6709347 6708502.222 6705374 6709794 + gene protein_coding_gene TRUE TRUE AT5G19840.1 transcription factor jumonji (jmjC) domain-containing protein similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G20810.1); similar to transcription factor jumonji (jmjC) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52940.1); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Cupin region; (InterPro:IPR007113) 0.796184197393365 6.60957432942085 4.59394251133249e-05 0.00100685760246136 10.4611652693585 6.01154617397856 0.796184197393365 0.147416268176482 AT5G61480_at 3.91892373082014 3.75890529686921 3.67317376519352 3.82816996947123 3.8187815738925 4.02292179698357 3.72528602637927 3.96412152033704 3.83169526872977 4.07776184061258 5.50129754873756 5.73799472462446 5.02471306010792 5.39815952167854 5.86801600458205 5.09323995488492 4.75829440800535 4.94111307733132 4.40220635405638 0.185544058323222 0.185133052498407 0.182395736210684 0.186584690951349 0.189013447093199 0.201921489266850 0.180544628821404 0.197860803658860 0.191196536958391 0.180755018140622 0.192926580811755 0.196527834674573 0.195761611907076 0.187614150647391 0.190211611131806 0.184584116439113 0.187251430608252 0.188958656574594 0.185948678494237 5 5 - 24741846 24742502 24742217.545 24741767 24745068 - gene protein_coding_gene TRUE TRUE AT5G61480.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G28650.1); similar to CLAVATA1 receptor kinase (CLV1) [Arabidopsis thaliana] (TAIR:AT1G08590.1); similar to BAM1 (big apical meristem 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G65700.1); similar to putative receptor-like protein kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:AAP68887.1); similar to Protein kinase; Actin-binding, actinin-type [Medicago truncatula] (GB:ABE92015.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17351.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.590209174572446 6.60928116445543 4.59571094784124e-05 0.00100685760246136 10.4607868435418 8.53590613930677 0.590209174572446 0.0666530874899634 AT5G66120_at 9.32618641800082 9.2955203327694 10.0225384087342 10.1241093231706 9.83063090889946 9.60359268259638 9.65655217713476 9.78323767176581 9.31149511417735 9.47913536369685 10.054707067038 10.1156519675591 10.0433459817581 10.0416053119756 10.1365059699483 10.1551546396571 9.9792237290378 9.94782933974752 9.16636106405619 0.105923601183558 0.101194984708313 0.102602320223688 0.101194984708313 0.102916867397406 0.116405251644412 0.101590142420132 0.104716848284528 0.120286488097257 0.102717628607446 0.105092227966131 0.101194984708313 0.101194984708313 0.105483737195777 0.102101801573485 0.101194984708313 0.112109169698918 0.113573991467732 0.111799492093613 5 5|0 -|/ 26448758 26449664 26449167.889 26448602 26451004 - gene protein_coding_gene TRUE TRUE AT5G66120.1|AT5G66120.2 3-dehydroquinate synthase, putative similar to putative 3-dehydroquinate synthase [Fagus sylvatica] (GB:ABA54866.1); contains InterPro domain 3-dehydroquinate synthase AroB; (InterPro:IPR002658)|similar to dehydroquinate synthase [Lycopersicon esculentum] (GB:AAL77575.1); similar to Os09g0539100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063802.1); similar to putative 3-dehydroquinate synthase [Fagus sylvatica] (GB:ABA54866.1); contains InterPro domain 3-dehydroquinate synthase AroB; (InterPro:IPR002658) 0.560049750564597 6.60587851724573 4.61629007082437e-05 0.00101085541668011 10.4563936911070 19.3944210811258 0.560049750564597 0.0485949791444152 AT5G05470_at 4.73881587148848 4.92477834540193 5.14346035065192 5.32586658532604 5.72319780283596 5.05407057851026 4.51486030534807 5.02424382897975 3.66958317526674 3.38024495718759 4.24131207241681 5.24584219600099 4.48269221511818 4.6972292814186 4.41711742595588 4.40060801822285 4.54503012509866 4.42900641294164 3.29118548589136 0.229449112786311 0.225020046706270 0.244224048096121 0.23512452715007 0.233217260215887 0.232477360155643 0.233302662202428 0.231555661446147 0.228557396134814 0.225715977899224 0.227472150194668 0.224497265371968 0.224304308371902 0.228725007665439 0.226803693089121 0.224304308371902 0.226506603436305 0.224304308371902 0.232508980512747 5 5|0 +|/ 1621237 1622079 1621489.429 1620459 1622341 + gene protein_coding_gene TRUE TRUE AT5G05470.1 EIF2 ALPHA (eukaryotic translation initiation factor 2 alpha subunit); RNA binding protein synthesis initiation factor eIF2 alpha similar to eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative [Arabidopsis thaliana] (TAIR:AT2G40290.1); similar to eukaryotic translation initiation factor 2 alpha [Oryza sativa (indica cultivar-group)] (GB:CAI29542.1); similar to Os03g0296400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049829.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029); contains InterPro domain Eukaryotic translation initiation factor 2, alpha subunit; (InterPro:IPR011488) 0.810662210237313 6.60367291334299 4.62968238047333e-05 0.00101327625157192 10.4535451372609 9.05834133749043 0.810662210237313 0.152352680424423 AT5G22400_at 4.69956074909313 4.78180545359467 4.90579925643045 5.16402217977828 5.20239071126419 5.10160750408753 5.19821806353606 5.11898370259755 4.66490036342786 4.6402862737747 6.04648602480318 5.42304073441174 5.72999001124478 5.66438974834762 5.87538810550554 5.41292974623472 5.3897640349666 5.60527826715862 4.67602277423171 0.222178091823336 0.217771759401655 0.215572105036113 0.210427246379945 0.217661014017027 0.207851336450745 0.214695198998918 0.213051066292046 0.228487872087378 0.208936325315428 0.2171437268938 0.213025885091880 0.211894146157253 0.214918233483677 0.207851336450745 0.207851336450745 0.232866385692606 0.207851336450745 0.213127557566018 5 5 - 7423083 7423709 7423374.545 7422719 7425470 - gene protein_coding_gene TRUE TRUE AT5G22400.1 rac GTPase activating protein, putative similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT3G11490.1); similar to RhoGAP1 [Nicotiana tabacum] (GB:ABG85154.1); contains InterPro domain PAK-box/P21-Rho-binding; (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198) 0.563409058812053 6.58853603337388 4.72272656345427e-05 0.00103311886929108 10.4339765875712 10.1734541881622 0.563409058812053 0.0518813750142667 AT5G62570_at 7.55024750944903 7.76919089360363 9.03085594468128 8.89633047483963 9.06848482653804 8.45504864387774 8.2682005520485 8.17844552313442 8.02510640148185 7.9236006265259 8.68261922243841 8.47021298406437 8.44505427308614 8.6246853456767 7.76097154301277 8.83629963585069 8.59802432587515 8.34218172147796 8.00662866890212 0.136406442262407 0.123252369864739 0.134379077837125 0.131975695357264 0.128522528404265 0.129544548255712 0.133032813054972 0.128771856728825 0.144189480043963 0.127675300129329 0.129856700510509 0.123130789788826 0.12474829226572 0.140968411579150 0.133712109620444 0.123130789788826 0.138317816370206 0.12822787500883 0.125656310143527 5 5 + 25133564 25134150 25133896.636 25131617 25134193 + gene protein_coding_gene TRUE TRUE AT5G62570.1 calmodulin-binding protein similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to hypothetical protein MtrDRAFT_AC146914g39v1 [Medicago truncatula] (GB:ABE91845.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 0.703026542695298 6.58613723745335 4.73765510560412e-05 0.00103586192412465 10.4308724176288 16.6296595612242 0.703026542695298 0.116139307329783 AT5G45600_at 5.28848647795355 5.96056671200652 6.24728265003058 7.0302589408131 7.51658672102653 5.88408349230354 5.40819542936226 5.44159476386333 4.18645114488050 3.82126033695356 5.80472576796996 6.38431721000233 5.88030296824529 6.37458023271806 6.11648432474286 6.35957859134743 4.75144986408331 5.7008893140801 4.4904648890938 0.288259285503513 0.284449752203780 0.296986578801351 0.287618566195227 0.282032759570987 0.303043720979624 0.288825543647158 0.28361169033345 0.286033520415408 0.285329407053848 0.283669340938142 0.282847690603534 0.281851868868603 0.286848945663473 0.285564960230299 0.286630689033719 0.29571721291149 0.289575076806788 0.285764385348990 5 5|0 +|/ 18506054 18506663 18506365.111 18505129 18507096 + gene protein_coding_gene TRUE TRUE AT5G45600.1 GAS41 (Gliomas 41) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man. similar to YEATS family protein [Arabidopsis thaliana] (TAIR:AT2G18000.1); similar to YEATS [Medicago truncatula] (GB:ABE79958.1); contains InterPro domain YEATS; (InterPro:IPR005033) 1.4501621745432 6.58248250261167 4.7604973333128e-05 0.00104033162497172 10.4261413793371 11.1409318106489 1.4501621745432 0.334265555426363 AT5G10390_at 4.6650026230491 4.82614264570251 6.53000177076366 6.62437824823559 4.4983253097331 4.63857299565928 5.73015723078577 5.78529569965537 5.22333428740288 5.43825280451188 5.69633911921336 6.80529881121256 5.4865121774619 6.03151752310006 6.92086795445643 5.78658041858003 5.35014984747119 5.16766953316508 4.72911502324169 0.234599393634953 0.221809576863217 0.219881548641972 0.219293285561538 0.219569814693201 0.226673034099360 0.217569048805696 0.215610866662038 0.232901206612279 0.21671246302376 0.227421434523327 0.216618702896749 0.222470417483595 0.225749975211277 0.229962120274477 0.215610866662038 0.229261642612941 0.228013622631047 0.225450613675732 5 5 - 3269110 3269440 3269266.545 3268848 3269551 - gene protein_coding_gene TRUE TRUE AT5G10390.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.548276457998405 6.57814213347196 4.78777859403046e-05 0.00104576641430222 10.4205202544359 10.9301600461821 0.548276457998405 0.0415268782629275 AT5G20885_at 5.20834642117719 5.60942603408449 5.72656118992745 5.84821898696886 5.57485223444555 6.78981763669138 4.60165125521743 5.9793172728024 4.37308782068322 3.98708724237149 6.68045516900314 6.66741887663838 6.62114268948076 6.74130438492767 6.5136556600284 6.43598572460397 6.25245434894428 5.35916072375635 4.2652838954611 0.165190739569517 0.167051016456521 0.165933664976076 0.168123058758814 0.165190739569517 0.169040661619929 0.172435894473667 0.175302968357171 0.189712593760766 0.177480750991052 0.174816388433170 0.165190739569517 0.172989661263751 0.172983164970990 0.165433302910397 0.171030843223644 0.179073356002398 0.178988800295927 0.179879811421090 5 5 - 7084147 7084623 7084425.818 7083967 7084736 - gene protein_coding_gene TRUE TRUE AT5G20885.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G43430.1); similar to RING-H2 protein [Medicago sativa] (GB:AAN32654.1); similar to Os04g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053644.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.41781907192777 6.57611793874237 4.80055899381038e-05 0.00104802998730800 10.4178978187312 10.9759906372534 1.41781907192777 0.326049410284255 AT5G13760_at 4.1864662657706 4.76376764092823 4.43007173639004 4.87031007739944 5.47662720608752 5.48428292431812 2.96513417999506 3.77122728603511 4.61407132329641 4.07207862316267 4.99628195909334 5.46531919974298 5.43630603095591 5.46548643504774 4.80381351730109 5.84631987571625 4.76339004135512 4.91988035109983 4.86143636802749 0.231786028780644 0.22810188216319 0.248157196880539 0.226901509809631 0.225099599972287 0.232872110543642 0.256042464227697 0.229616862159022 0.239039742653456 0.230142972946254 0.226649303936579 0.225096649617609 0.225085684932372 0.225651170193509 0.228719340118766 0.226499623608287 0.242256276865070 0.225770774023649 0.237618607975585 5 5|0 +|/ 4443501 4444427 4444085.8 4442017 4444938 + gene protein_coding_gene TRUE TRUE AT5G13760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04440.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20799.1); similar to Os07g0656100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060501.1); contains InterPro domain Protein of unknown function DUF580; (InterPro:IPR007603) 0.919955857163354 6.56781604950936 4.85336028996981e-05 0.00105851085175993 10.4071360770410 9.35746680517446 0.919955857163354 0.187740892985588 AT5G16720_at 2.06744028958870 2.02908816155357 2.35258066045829 2.06397608709233 2.80160327985832 2.91573419969942 2.19738356440447 2.47828008888359 2.31886295234504 2.95017147768841 3.51925867451973 4.55866999970156 3.48352776210348 3.77655746235335 3.92432916384412 3.90652879005346 2.77843483049606 3.43133466038497 3.18008966373930 0.213653165183865 0.217096304274094 0.215504677065425 0.22521135181084 0.222738897883912 0.2120660076696 0.214167111773117 0.214893092361597 0.216605931654301 0.214162679309409 0.210505566765156 0.220712464034233 0.219211170417895 0.217650625129459 0.212995980337985 0.215848817416589 0.219243122750892 0.209601020380247 0.222098863140474 5 5 + 5496051 5496512 5496288 5494231 5496813 + gene protein_coding_gene TRUE TRUE AT5G16720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70750.1); similar to Os03g0708700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051039.1); similar to Protein of unknown function, DUF593, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX95673.1); similar to Os03g0259900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049616.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.598190500338673 6.56780204029214 4.85344991622754e-05 0.00105851085175993 10.4071179083661 5.60761322437051 0.598190500338673 0.0727431342145927 AT5G08220_at 1.51601871085992 1.24307800943732 1.84688658007709 1.81510068394423 1.71809793574534 1.76860858832676 1.18159829280483 1.26138111148932 1.60660925404421 1.17234674970011 1.76807682388602 1.80566942809256 1.78695553692124 2.45902955541127 1.89807037374516 2.39256203467796 2.30977748084132 2.11670350431746 1.52750686349074 0.174798216574535 0.174896126650181 0.177312774618057 0.174798216574535 0.176554890278746 0.179704228450222 0.175780972652777 0.182894475835503 0.181426886913383 0.179666125978479 0.187128193494462 0.182461022294527 0.184300956021692 0.18481186397632 0.181316621737801 0.180965126255288 0.192256572492832 0.175870753277507 0.179160698973264 5 5|0 -|/ 2642293 2642963 2642771.111 2642281 2642992 - gene protein_coding_gene TRUE TRUE AT5G08220.1 unknown protein 0.559136192850223 6.56635619727943 4.86270950058181e-05 0.00105999711866112 10.4052426276201 3.29514284640975 0.559136192850223 0.0502823105459911 AT5G38830_at 7.33610495609658 7.86461772120287 8.6862428389819 8.57309343961692 9.29646753937883 8.21760423447709 7.76103526078202 7.96398106430407 6.97182589290033 6.76453139748997 8.2214138089751 8.1214328714046 7.75223854090576 7.69979087551934 7.90023148875388 8.31275443722186 7.67012997395478 7.42016496265109 6.80757427160303 0.195646177592117 0.192166337070427 0.196752945912425 0.198378424980005 0.204473508393254 0.214620018980578 0.192390639178938 0.198908957525786 0.225000763561487 0.204745072789834 0.199061742533104 0.192166337070427 0.193201801696734 0.219933337968739 0.196467636610042 0.196888984924264 0.215804838058918 0.206495383872951 0.202925192449785 5 5|0 -|/ 15562998 15563805 15563352.6 15562799 15565416 - gene protein_coding_gene TRUE TRUE AT5G38830.1 tRNA synthetase class I (C) family protein similar to tRNA synthetase class I (C) family protein [Arabidopsis thaliana] (TAIR:AT3G56300.1); similar to Os09g0556500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063899.1); similar to Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93925.1); contains InterPro domain Cysteinyl-tRNA synthetase, class Ia; (InterPro:IPR002308); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080) 1.00060484755474 6.56274487481441 4.8859204156416e-05 0.00106452154266454 10.4005573500135 15.5800167854822 1.00060484755474 0.211754254752414 AT5G40370_at 12.5463207864789 12.745206344818 13.1423453896978 13.1615656856412 13.0771630962074 12.9255641413853 12.5935170756115 12.7389802326775 12.0857244928546 12.3647004881237 12.8853008466305 12.5836646580213 12.8293978557396 12.8413458623500 12.397344038134 12.9001171441462 12.9513676201414 12.9048929454429 11.8230028067322 0.0771527532934315 0.0745406108237663 0.0776219485885917 0.080012166258153 0.0745406108237663 0.0779832826218421 0.074573099059029 0.0754330577696751 0.0892622309772931 0.0747793866340052 0.0785513639435769 0.0751251646172081 0.0774367072959472 0.0750330197724203 0.0761578607000372 0.0745406108237663 0.0879740836855009 0.0790996816683393 0.0754963120231997 5 0|5 /|- 16165090 16165970 16165416.375 16164822 16166426 - gene protein_coding_gene TRUE TRUE AT5G40370.1 glutaredoxin, putative Identical to Glutaredoxin-C2 (AtGrxC2) (GRXC2) [Arabidopsis Thaliana] (GB:Q9FNE2); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G63030.1); similar to glutaredoxin [Tilia platyphyllos] (GB:AAL04507.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin active site; (InterPro:IPR011767) 0.558094871879369 6.55595433960054 4.92988786549205e-05 0.00107344636008310 10.3917422368683 25.3052435776793 0.558094871879369 0.0501759033399396 AT5G22840_at 4.06993863330097 3.94744629267588 4.54938413446235 4.35171543237328 4.69012523933281 4.53814763782058 3.18234369775266 3.33754375497938 3.08992500935323 3.28142971843207 3.40339520410680 3.38058309925466 3.57173810573981 3.3409563617257 3.37378270070528 3.71458413859922 3.89799550575107 3.02283491474224 3.32007056687075 0.257643410357882 0.256420690470502 0.251087224148649 0.257822834835581 0.258420548208658 0.253742791526151 0.249789394717568 0.253756297492372 0.249828355763404 0.267590346014910 0.248254906732890 0.249154872693477 0.255166655799257 0.262955264549394 0.258581322556544 0.249357090351073 0.25136882050228 0.258255874305026 0.259782754900485 5 5 - 7631106 7631805 7631416.636 7630720 7633226 - gene protein_coding_gene TRUE TRUE AT5G22840.1 protein kinase family protein similar to SRPK4 (SER/ARG-RICH PROTEIN KINASE 4), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT3G53030.1); similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G44850.1); similar to putative serine/ar (GB:AAS79595.1); similar to SRPK4 [Oryza sativa] (GB:AAL58968.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.565391835964723 6.55422110169162 4.94117820902948e-05 0.00107494033978234 10.3894911573317 7.43018502886063 0.565391835964723 0.0550687943775771 AT5G67190_at 3.15287449187046 3.1558514058865 3.39633292268232 3.89071331953197 3.63077268035317 4.14969532312088 3.01811209941493 3.46968209319074 3.35285614397491 3.11000775358893 4.50866350715408 4.40926018793226 4.65057714393446 4.43431649740668 4.06561013216535 4.36876726535543 4.564421299148 2.95687929920329 3.25546307399484 0.230734708122624 0.226211336587433 0.226490208992463 0.223323126751739 0.227287676462937 0.232777193745997 0.233428253807147 0.235509034871815 0.226485869537184 0.224918887485555 0.223323126751739 0.227201590167529 0.234499086001525 0.23437802453426 0.227201436514041 0.228007658656972 0.232712895630236 0.225924704309785 0.228970635729494 5 5 - 26826424 26826891 26826669.455 26826361 26826915 - gene protein_coding_gene TRUE TRUE AT5G67190.1 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. similar to ATERF#011/CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G50260.1); similar to dehydration responsive element binding protein [Gossypium hirsutum] (GB:AAQ08000.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.78655906575799 6.55021729230624 4.96736541452092e-05 0.00108009535306568 10.3842894421906 7.22513141220154 0.78655906575799 0.146598548192212 AT5G37130_at 5.47413892034146 5.1977155740551 6.00807638756448 5.86124563793868 5.77602723940051 5.55711383153262 4.93713387643488 4.96829694140932 5.27071314525505 5.59199733277966 5.93801262570845 5.97074711737987 5.82270517139471 5.98466190332652 5.98211149836777 6.06958482948003 6.08406043009352 5.71882917692112 5.43957710961564 0.176847136634686 0.174929288552723 0.179592034982660 0.176981887031753 0.172835763136011 0.176222526126731 0.18474699403449 0.171184189931998 0.182123976699128 0.172316634176404 0.179562152880865 0.174855362004966 0.171116434436566 0.171116434436566 0.180124023618662 0.174881379043633 0.172858967895229 0.177415437966521 0.171116434436566 5 5|0 +|/ 14703032 14703656 14703307.625 14698608 14703914 + gene protein_coding_gene TRUE TRUE AT5G37130.1 similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G17270.1); similar to Os07g0455100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059558.1); similar to tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC65407.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105) 0.58426883879138 6.54965400124515 4.97106160576133e-05 0.00108035724246934 10.3835574307382 11.1626860294017 0.58426883879138 0.066319314171644 AT5G53830_at 2.24943127482817 2.61946975757561 3.63265882369514 4.12081182671413 2.16856955077739 2.66571462893424 2.02323047570698 1.71535071889954 2.07240214280082 2.28287081219604 2.25045618543573 3.17926186169503 2.72687518893592 2.57131978693142 3.69179349780310 2.91935359313795 2.48695123903111 3.10967314041838 2.51317541734598 0.230368514361485 0.228733617642685 0.229919564791968 0.228285524939126 0.225480143551596 0.227408013872119 0.239128987576001 0.227303503312771 0.235132894177241 0.225480143551596 0.227174279141641 0.230380720556317 0.233895131016234 0.230341447238294 0.225480143551596 0.225636415731049 0.227399742899481 0.225480143551596 0.226450098346836 5 5 + 21874436 21874943 21874753.364 21874276 21875210 + gene protein_coding_gene TRUE TRUE AT5G53830.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT3G15300.1); similar to DNA-binding WRKY; VQ [Medicago truncatula] (GB:ABD32365.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.786272960835139 6.54899688988888 4.97537715841136e-05 0.00108075340739077 10.3827034385955 5.22762630836866 0.786272960835139 0.146552372378102 AT5G60360_at 12.6873398752856 12.7988214842259 13.4803290291083 13.6195456842043 13.5443647235888 13.3143843110629 13.0364347852686 12.9903177658447 12.8492999465856 12.8872770764285 13.3046223268928 12.9611976127126 13.5851680021202 13.4618102831836 12.9427031138952 13.3646419783902 13.4610779945513 13.5618549528264 12.7371526265941 0.0798644162064911 0.0750467502415703 0.078540316684948 0.0793196398745947 0.0764064942847291 0.0787340264379556 0.0760554931588371 0.0766211123477039 0.0781080996439938 0.0755627951092614 0.074942634335889 0.0757391891631176 0.0760893860935396 0.074942634335889 0.0773939036822481 0.074942634335889 0.0784799099052494 0.0769280292824996 0.0754327209054235 5 5|0 +|/ 24298567 24299343 24298878 24297123 24299623 + gene protein_coding_gene TRUE TRUE AT5G60360.1|AT5G60360.2|AT5G60360.3 AALP (ARABIDOPSIS ALEURAIN-LIKE PROTEASE); cysteine-type peptidase|AALP (ARABIDOPSIS ALEURAIN-LIKE PROTEASE) Encodes AALP protein. Identical to Thiol protease aleurain precursor (EC 3.4.22.16) (AtALEU) (Senescence- associated gene product 2) (ALEU) [Arabidopsis Thaliana] (GB:Q8H166;GB:Q9LL83;GB:Q9S9A9); similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G45310.1); similar to cysteine protease [Brassica napus] (GB:ABA71355.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60582.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668)|Identical to Thiol protease aleurain precursor (EC 3.4.22.16) (AtALEU) (Senescence- associated gene product 2) (ALEU) [Arabidopsis Thaliana] (GB:Q8H166;GB:Q9LL83;GB:Q9S9A9); similar to cysteine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G45310.2); similar to cysteine protease [Brassica napus] (GB:ABA71355.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60582.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) 0.558617721268488 6.54799150114631 4.98198779905954e-05 0.00108138914656552 10.3813966972523 26.2614227487941 0.558617721268488 0.050993074281151 AT5G66030_at 8.22127134576496 7.9705027371528 9.00832163198585 8.696529499567 9.41611680749615 8.93752413677948 7.9871131712506 7.60654237314804 8.37108068712931 8.48814854960211 8.97670952180505 8.84267553906395 8.86635460473438 8.7442610804967 8.56401990906797 9.0811622199598 8.65157153302582 8.90810073576906 8.46935326851293 0.138240123403860 0.138343269993051 0.149271237672750 0.144044735034895 0.144566828301882 0.152095575543141 0.146645224222587 0.145269093526082 0.154451689792788 0.149847179817325 0.142098102895683 0.139553303239312 0.141193226933247 0.137023568633991 0.137628105890245 0.136625246506894 0.148710647821995 0.140512203797622 0.151174494441077 5 5 - 26422380 26423326 26422713.364 26422120 26427481 - gene protein_coding_gene TRUE TRUE AT5G66030.1|AT5G66030.2 ATGRIP/GRIP; protein binding|ATGRIP/GRIP Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization. similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to myosin heavy chain-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72643.1); similar to Os07g0472500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059614.1); contains InterPro domain GRIP; (InterPro:IPR000237); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) 0.727380835018457 6.54779329785407 4.9832921399155e-05 0.00108138914656552 10.3811390675389 17.116599076929 0.727380835018457 0.126458362671200 AT5G39830_at 8.64091664055188 8.44183700107434 9.11839696662808 8.97153569156838 9.73470721183582 9.1107886183086 9.32094904411178 8.66335376365101 7.85668748420206 8.3852521174798 9.10905355278582 9.5529639043636 9.38140152636132 9.43790143948068 9.55980616793689 9.66986922512316 9.50321309204145 9.0571195239192 8.37366927765332 0.129003145659464 0.125890007895286 0.129671316567482 0.129038877186143 0.126523639750894 0.131558264087625 0.130761611042664 0.128297997945581 0.140877212777172 0.135006314043925 0.127780919319212 0.128634629648825 0.130482453042684 0.130721948266490 0.136110971726638 0.128827009922137 0.129428971237402 0.125386610944657 0.132481151211207 5 5|0 +|/ 15961878 15962618 15962201 15960025 15963053 + gene protein_coding_gene TRUE TRUE AT5G39830.1|AT5G39830.2 DEGP8 (DEGP PROTEASE 8); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 8, chloroplast precursor (EC 3.4.21.-) (DEGP8) [Arabidopsis Thaliana] (GB:Q9LU10); similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to OSJNBa0072F16.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD40980.2); similar to Peptidase S1 and S6, chymotrypsin/Hap [Medicago truncatula] (GB:ABE84843.1); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) 0.835403051980542 6.54521450058951 5.00029622084989e-05 0.00108453627151932 10.3777865559474 17.8073701241062 0.835403051980542 0.162607571476733 AT5G04250_at 3.98583822378941 4.16962638884869 4.65604984371971 4.33143956768465 5.19255564932511 4.53331464964804 3.04703270512553 3.43147123802451 3.29128411905432 3.28550402701679 3.69728782870351 3.33599175062888 3.89418415742182 3.51991003629666 4.04682214979972 4.33514583098524 3.90608974282376 4.16880921050427 3.35836722858652 0.251504443140021 0.243894251222210 0.253312567396345 0.259948888390491 0.267025214838434 0.256160545003656 0.259000481752931 0.242844652853041 0.249267887886913 0.248545955802928 0.247657669980595 0.245692563343413 0.242197210358547 0.252024885139252 0.24384205889179 0.242654836139223 0.251782153919509 0.248457104478151 0.246951888464322 5 0|5 /|+ 1177628 1178331 1178012.833 1176009 1178701 + gene protein_coding_gene TRUE TRUE AT5G04250.1 OTU-like cysteine protease family protein similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT5G03330.2); similar to OTU-like cysteine protease-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22968.1); similar to Os03g0859800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051970.1); contains InterPro domain Ovarian tumour, otubain; (InterPro:IPR003323) 0.785579709411808 6.53200537117114 5.08837723967616e-05 0.00110308873137616 10.3605990108459 7.75579030657805 0.785579709411808 0.146998869971527 AT5G57560_at 6.12925638447625 6.11340563022568 6.35416351220377 6.37578668335068 7.59665794596784 7.46481814038993 3.15934767364091 3.91738177022259 7.59482333692527 4.30953564508408 7.12736354516325 3.77388310685998 3.50577430531269 6.60020208605884 5.06595637954861 4.90231173282886 2.95862558556173 4.45805488338789 4.37763900301401 0.250230883928800 0.245032380981565 0.241173083276302 0.251673377618395 0.241173083276302 0.255664236858732 0.24158265335229 0.241173083276302 0.256117651356213 0.243427739128120 0.241173083276302 0.244523854964161 0.241173083276302 0.250686863657057 0.247326369013214 0.243537019312667 0.242322478884489 0.249119736634032 0.241173083276302 5 5 - 23324552 23325033 23324809.727 23324356 23325508 - gene protein_coding_gene TRUE TRUE AT5G57560.1 TCH4 (TOUCH 4); hydrolase, acting on glycosyl bonds Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli Identical to Xyloglucan endotransglucosylase/hydrolase protein 22 precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) (XTH22) [Arabidopsis Thaliana] (GB:Q38857;GB:Q8H783); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.744848748626237 6.53138285202974 5.09256922490833e-05 0.001103445772022 10.3597883654826 11.0020292749420 0.744848748626237 0.133231439151948 AT5G02790_at 11.7650023139546 11.775147009414 12.6618122480539 12.3706590584454 12.6099322788610 12.2978730763657 12.3718406891693 12.0854293679237 11.4859833803333 11.8200477349873 12.3534989074143 12.2511221078399 12.5527046452944 12.5521178383247 12.0325349803773 12.5151795706283 12.6526423044277 12.4093495615492 11.6224162364150 0.0808872676345507 0.0780903107986849 0.0799437224977647 0.0794914190963176 0.0783207668677896 0.0800265579781366 0.0807494396835702 0.079530158581564 0.0933748907625522 0.0780903107986849 0.0790479814114429 0.0791383787727125 0.0780903107986849 0.0793463065941774 0.0789496978845343 0.0780903107986849 0.0841712328619625 0.0819508516884835 0.0800752718063776 5 5|0 +|/ 633518 634262 634010 632800 635123 + gene protein_coding_gene TRUE TRUE AT5G02790.1 In2-1 protein, putative similar to In2-1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G02780.1); similar to In2-1 protein [Glycine max] (GB:AAG34872.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, omega-class; (InterPro:IPR005442); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.628896137943118 6.52586916577641 5.12986018128654e-05 0.00111097067990789 10.3526059516472 24.2710667669704 0.628896137943118 0.0889651600061002 AT5G25060_at 6.899785332039 6.85078398302623 7.57309328015651 7.61169824779296 8.07278463091984 7.40100313672598 7.00959397060823 6.51977704866345 6.81115683037338 7.00468692478797 7.88482289447255 8.06534371564807 7.61217139411745 7.82306908013177 7.57906444326468 7.8682668602307 7.25805591818909 7.41810804879272 7.12483794752046 0.145023926779653 0.142776075427436 0.150315085779207 0.150605575086279 0.150899074865836 0.149856896900403 0.144160884514135 0.144958216592702 0.155626354989799 0.144740652890181 0.145581432926520 0.144407664856289 0.142162404147673 0.148897006431446 0.146454672610279 0.148572410894581 0.144085064038488 0.146489941498188 0.151002897594519 5 5 - 8634234 8635404 8634856.909 8634077 8640220 - gene protein_coding_gene TRUE TRUE AT5G25060.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G10800.1); similar to putative U2-associated SR140 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28014.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034); contains InterPro domain SWAP/Surp; (InterPro:IPR000061); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain mRNA splicing factor, Cwf21; (InterPro:IPR013170) 0.776522650221604 6.52456284495609 5.13873818011158e-05 0.00111233776940853 10.3509036163115 14.5767349680331 0.776522650221604 0.144280528164075 AT5G49230_at 7.22023909832794 7.50944306225779 7.79032466378001 8.18553355617424 8.67163559722241 8.21068364749385 8.1360704820613 8.0647960490126 7.64462634434974 7.36955981716258 8.53066782253785 8.73935919565311 8.22859688794924 8.35356439541318 8.46702016260035 8.62646476407954 7.82962977156315 8.61448805630939 7.50980679519365 0.179026366232666 0.181730613036917 0.202388612390395 0.174568604585663 0.172260024302866 0.184910551858907 0.179290580389613 0.173622895535951 0.197106723753175 0.177231123587247 0.182474859754487 0.176097080396735 0.175943247242685 0.192227791247264 0.185740025768969 0.175932594698578 0.194976326569092 0.181357876451761 0.176149469764038 5 5|0 -|/ 19976287 19977411 19976609.7 19976099 19977770 - gene protein_coding_gene TRUE TRUE AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06760.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19; (InterPro:IPR008598) 0.698816711515309 6.52407314165628 5.14207054561702e-05 0.00111250367875155 10.3502653936162 15.9394515366655 0.698816711515309 0.117037388086361 AT5G67390_at 5.68126859294131 5.89360373596309 6.5238525305246 6.59647831896447 7.61243200259041 6.79664470405289 7.14416624525129 7.17193070504712 7.08211496889447 7.14353728465753 8.57961046380043 8.56752102509377 8.3040204417562 8.44253250897349 7.77139797044246 8.53315773839592 7.9001581817255 7.67438374622018 6.97219985865418 0.189575242961526 0.180508609091164 0.196181170286873 0.189707448863731 0.183053186195768 0.198021750712213 0.180508609091164 0.184746489753006 0.187254505958436 0.185323485923151 0.185038457160080 0.194682619466979 0.193574369101105 0.191209301384592 0.181983883515185 0.186294630615570 0.195812535875375 0.185651162174544 0.190496387162174 5 5|0 -|/ 26905121 26905711 26905415.5 26904896 26906464 - gene protein_coding_gene TRUE TRUE AT5G67390.1|AT5G67390.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57340.1); similar to hypothetical protein MtrDRAFT_AC137703g30v2 [Medicago truncatula] (GB:ABE82530.1) 0.78262831235733 6.51998315160244 5.16999318241595e-05 0.00111742963276159 10.3449335975978 14.3213213362268 0.78262831235733 0.146498771215714 AT5G27560_at 9.73794956088357 9.791190784922 10.2695883119717 10.1936450699740 10.4303811404082 10.3210431229360 10.1587702531148 10.2289719873942 9.76895172676834 10.0857789645548 10.6184351938537 10.6962751606345 10.7227754997210 10.5783494622816 10.6570375200076 11.0275266135042 10.6193409584352 10.5859692467539 10.0104492606791 0.0860234460319249 0.0808944133382336 0.0808944133382336 0.0847404557841483 0.0812264437771702 0.0861101912860472 0.083007105212455 0.0808944133382336 0.0877690708744095 0.0864187531996797 0.086864706854249 0.0810569335017409 0.0818612342252033 0.0871479672706097 0.0881981115623672 0.0829223483657177 0.0872768294576672 0.0817460875577181 0.0856747740790443 5 5|0 +|/ 9732630 9733599 9733147.1 9731605 9733921 + gene protein_coding_gene TRUE TRUE AT5G27560.1 similar to Os06g0146300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056793.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54638.1); contains domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain (SSF55424) 0.528798743821021 6.51719845012685 5.18909767564547e-05 0.00112069268036802 10.3413019966926 20.4630793744004 0.528798743821021 0.0276265332004002 AT5G47870_at 6.3761461463934 6.31533196961723 7.23770539868843 6.93305955281837 7.25493359784018 6.91951404575349 6.71103402560537 6.69102384438483 7.3321689606693 6.90039647676776 7.80280623521344 7.54611447065022 7.72176495074351 7.74973114249751 7.7070430989465 7.98151839316033 7.41776911605716 7.8216968124847 6.97180655110083 0.193105372372429 0.19145250793036 0.197998278292254 0.203786358597418 0.193371487874040 0.197831250274436 0.197639040143366 0.201813065342417 0.197275668531884 0.196916897794040 0.188029123178090 0.196891935725828 0.190163159508401 0.19015343370059 0.192405491517288 0.188491069204603 0.196269241346790 0.189947036827525 0.193155869845198 5 5|0 -|/ 19401785 19402992 19402480.8 19401594 19403095 - gene protein_coding_gene TRUE TRUE AT5G47870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71310.1); similar to Os03g0851500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051915.1); similar to Os09g0512800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063645.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD34413.1) 0.606675341782393 6.5170294047967 5.19025985228177e-05 0.00112069268036802 10.3410815036406 14.1981833344619 0.606675341782393 0.0791929111532477 AT5G47830_at 6.10189941576126 6.09925107909845 6.56639100790254 6.77467349091812 7.24441950030155 6.99823194288129 6.05363877412071 6.24792704375454 6.82770167193598 6.33992032069543 6.94927392514827 6.80461790990654 6.94165324302734 7.06977176142819 7.16843484726018 6.82225833550826 6.58913788881233 7.03834614192987 6.43910567788236 0.186469270463073 0.182806940681571 0.194266142296509 0.174083324270732 0.185474298930471 0.196833243278566 0.181864006130958 0.184990219470358 0.178027004007016 0.170271295901694 0.173799974148649 0.174235117494346 0.175373457063347 0.17490192709088 0.169124262907655 0.174245289896072 0.182628180449518 0.174728561012150 0.170624441806628 5 5 - 19390280 19391505 19390878.111 19390124 19391557 - gene protein_coding_gene TRUE TRUE AT5G47830.1|AT5G47830.2 similar to hypothetical protein MtrDRAFT_AC150207g26v1 [Medicago truncatula] (GB:ABD32636.1) 0.578805386886753 6.51216331110584 5.22383407358198e-05 0.00112738065783683 10.3347326491304 13.2400603552417 0.578805386886753 0.0651533805920298 AT5G09310_at 7.11434197742418 7.89249383670747 7.93161835722965 8.36394459047028 8.68056649640441 7.960276622753 7.11582098420285 7.3417772894699 7.25956281975067 6.50727247027629 8.00410185076935 7.69997665123183 7.74948157054996 8.22865738815264 7.68759688676314 8.05016533405261 7.79543819666104 7.87977732283218 6.74160211063363 0.195406066850207 0.179145839845057 0.198657095536110 0.182735238204028 0.186064452315445 0.190937625555151 0.182627598712051 0.183123270577095 0.197987041020449 0.193927148120376 0.182321159446150 0.179073408317251 0.191752178754558 0.184332702156219 0.182793924103902 0.179014620248516 0.190908598671842 0.180019364908637 0.181025662792321 5 5 - 2887450 2888452 2887962.182 2887194 2888539 - gene protein_coding_gene TRUE TRUE AT5G09310.1 Identical to Gamma-secretase subunit PEN2-like protein [Arabidopsis Thaliana] (GB:Q9FY84); similar to presenilin enhancer 2 homolog [Rattus norve (GB:NP_001008764.1); similar to Os01g0960000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045463.1); similar to Presenilin enhancer 2 homolog [Danio rerio] (GB:AAH92674.1); contains domain FAMILY NOT NAMED (PTHR16318) 0.959373297334815 6.50989928893578 5.23953440746461e-05 0.00113020645045663 10.3317775640705 15.1616276195061 0.959373297334815 0.201985267120338 AT5G27710_at 5.16351694590556 4.95310280162919 6.89655967565998 6.25186856897699 7.48958460585192 6.48490406994557 5.979120904766 5.53459065183721 4.18199729092798 4.51294986945497 5.1134975179987 5.02193869997235 5.40969366296096 4.8329098425328 4.80267680723626 5.68741696711825 5.01294660661214 5.04493763377866 4.57813188135791 0.271159845095643 0.270695797342181 0.263569039848908 0.276284055122815 0.266049812448865 0.273782196038315 0.261764900583342 0.262261594294499 0.26746237537187 0.266350275251121 0.262880819882296 0.261764900583342 0.269380106987542 0.278175295743146 0.270857096372188 0.263711027044156 0.278106611542607 0.265114919526236 0.268501934930015 5 5|0 +|/ 9813837 9814995 9814517.778 9812992 9815424 + gene protein_coding_gene TRUE TRUE AT5G27710.1 similar to At5g27710 [Medicago truncatula] (GB:ABE92866.1) 1.03226947038505 6.50697634737424 5.25987913542289e-05 0.00113403076483027 10.3279613185571 10.8642119769998 1.03226947038505 0.223427636097398 AT5G58130_at 6.2670106731281 6.0441415105565 6.66149199242396 6.3473193240961 6.80368936096589 6.7197904142655 5.58081086988947 5.86738086531357 6.1674662078678 5.76572150120319 6.3808572019249 6.99020150605781 6.62491726189093 6.5205502360591 6.76414863566127 6.66708115668374 6.12247337282088 6.71518938744011 6.24169909802442 0.20065613138979 0.191092579683538 0.195429877607954 0.205875563847583 0.192129149060668 0.211523107127839 0.191803053493449 0.191854806189075 0.208326668900798 0.191092579683538 0.193707645513129 0.194448290906191 0.193755276413307 0.203663240079830 0.198481261339035 0.195053852248955 0.221787678306121 0.200177643327806 0.196676689829970 5 5 - 23538500 23538854 23538682.909 23538275 23541023 - gene protein_coding_gene TRUE TRUE AT5G58130.1 RNA recognition motif (RRM)-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to Os02g0138200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045836.1); similar to marker Xucw84 [Triticum tur (GB:ABI15899.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.616559267834079 6.50478794953222 5.27516669954728e-05 0.00113676149429566 10.3251032841425 12.6146908499211 0.616559267834079 0.0843428956494765 AT5G63520_at 6.49633841276581 6.65898399592326 7.09741175666491 7.21658406352546 7.98890727263131 7.18903837198504 5.94927685419981 6.23533525835845 6.80046198549391 6.13109534135753 7.52987897751092 7.43746275262735 6.67023684277119 7.17003645587501 7.04925455578468 7.35237532629451 6.53038451099332 7.00923165477922 6.69735403956191 0.235414576267894 0.217935221977764 0.221792756348307 0.224430350751511 0.221445319226722 0.228436652102098 0.225342795298317 0.217935221977764 0.225167495701678 0.226970600047504 0.220442208663889 0.217935221977764 0.226303014396503 0.220814619642812 0.224417246430793 0.220766858471288 0.238094304619750 0.223961234896768 0.228751999910196 5 5 - 25443536 25444260 25443793.182 25443403 25446338 - gene protein_coding_gene TRUE TRUE AT5G63520.1 similar to hypothetical protein sll0524 [Synechocystis sp. PCC 6803] (GB:NP_442809.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.79431945749913 6.5018365678542 5.29585987401426e-05 0.00114065380317868 10.3212476817479 13.6722735432821 0.79431945749913 0.151091220656359 AT5G50720_at 2.24984121748126 3.22095493854750 3.78673722907106 4.48292509830722 3.85823555833724 3.84048023822679 3.84962237915559 3.98920761867615 2.75815168455657 3.2683156723956 3.93228991476939 4.26170867608927 4.43952750306585 4.37883153279782 4.11342209628579 5.04329544662458 4.89729361489258 3.90177411401638 3.20902191301356 0.249386431629671 0.238538513353125 0.244178167247895 0.245856304744461 0.244251114852179 0.256177573630008 0.243467107104052 0.248035157669610 0.252204636932338 0.241052791753516 0.241598382128504 0.244306706839517 0.244242793082662 0.252767831361628 0.248956836357712 0.241644042117839 0.266580921272169 0.25141112783619 0.247498042185474 5 5|0 -|/ 20651045 20651701 20651253.778 20650419 20651778 - gene protein_coding_gene TRUE TRUE AT5G50720.1 ATHVA22E (Arabidopsis thaliana HVA22 homologue E) Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. Identical to HVA22-like protein e (AtHVA22e) (HVA22E) [Arabidopsis Thaliana] (GB:Q9FED2;GB:Q9LUE9); similar to ATHVA22D (Arabidopsis thaliana HVA22 homologue D) [Arabidopsis thaliana] (TAIR:AT4G24960.1); similar to Protein HVA22 (GB:Q07764); similar to Os11g0498600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067939.1); similar to hypothetical protein [Triticum aestivum] (GB:BAC80265.1); contains InterPro domain TB2/DP1 and HVA22 related protein; (InterPro:IPR004345) 0.978604715758125 6.49760703533063 5.3256667140444e-05 0.00114650422765792 10.3157201045260 7.38450767754516 0.978604715758125 0.208208473241113 AT5G52410_at 3.95339777720819 3.39523669197894 4.39673762376179 4.37862215735291 4.37270424569192 4.30040462017717 3.74865922796613 3.10201432669499 3.79677265426752 3.4249657145255 4.5934666100615 4.65543592598491 3.86281635699718 4.37779949766909 4.00224511487806 4.24714216727139 4.27449661260835 4.27545669514328 3.36370893634117 0.190026440755125 0.186360498852360 0.191936141331690 0.189305070134120 0.186935160223594 0.189717460765044 0.189387637310788 0.191102716830641 0.192390523742502 0.186360498852360 0.186997701142444 0.189867922647381 0.186360498852360 0.187456011771823 0.186360498852360 0.186360498852360 0.186558542500687 0.186360498852360 0.198870975075898 5 5|0 +|/ 21295750 21296477 21296151.7 21293182 21296670 + gene protein_coding_gene TRUE TRUE AT5G52410.1|AT5G52410.2 |oxidoreductase/ transition metal ion binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23890.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG00038.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1); contains InterPro domain S-layer homology region; (InterPro:IPR001119)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23890.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG00038.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1); contains InterPro domain S-layer homology region; (InterPro:IPR001119); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 0.784957546657936 6.4920975220988 5.36476442257105e-05 0.00115434798156382 10.3085157714591 7.86326698766473 0.784957546657936 0.148388580191819 AT5G46020_at 10.3437657322307 10.5175901433349 10.9684834456838 11.0104241387526 11.2702796687359 11.0880709741390 10.3939649531562 10.6007698964998 10.6182586650446 10.7632925940358 11.2869950725005 11.2142719817228 11.3024600498189 11.3605077569261 11.2033290655476 11.2919475552262 11.1159119422481 11.0819522153766 10.8034924504854 0.088375164189006 0.0866477495687255 0.089505588492291 0.088574264201969 0.0882551807603811 0.0946592621636017 0.0899012809787047 0.0866477495687255 0.0965666576439183 0.0875499691560301 0.0874758488041485 0.0871516796820395 0.0866477495687255 0.0866477495687255 0.0894613044124393 0.0869213773546936 0.0931493173815612 0.0872708261134388 0.0867455159419586 5 0|5 /|- 18680478 18680970 18680703.4 18680073 18682066 - gene protein_coding_gene TRUE TRUE AT5G46020.1 similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to Os01g0752800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044269.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT01307.1); contains domain SUBFAMILY NOT NAMED (PTHR22055:SF4); contains domain FAMILY NOT NAMED (PTHR22055) 0.562057963627341 6.48271135565459 5.43208395496163e-05 0.00116825349276262 10.2962319665961 21.7544285481213 0.562057963627341 0.0568563560788734 AT5G43070_at 3.43746125696958 3.49289204084859 3.57383153157797 3.69766483634352 3.73335061376474 4.13285641919554 3.72181491654852 3.64071692689759 3.41916629225601 2.90118918963897 4.45123523921163 4.52235331711177 3.86609375477786 3.94043169564537 4.73890917318527 3.75517940060236 3.86528501327172 4.1382511357604 3.23229013033991 0.192567466048140 0.192458761967346 0.195936433230158 0.192965527703731 0.193069771189729 0.193093609580116 0.190692172893190 0.194326801792539 0.193756256536850 0.194157932469471 0.198539431480169 0.192101312335875 0.201878417685802 0.190808550838450 0.186694181271124 0.186694181271124 0.194743126888895 0.186694181271124 0.195326094196992 5 5 - 17306549 17306921 17306753.091 17306328 17307004 - gene protein_coding_gene TRUE TRUE AT5G43070.1 WPP1 (WPP domain protein 1) similar to WPP2 (WPP domain protein 2) [Arabidopsis thaliana] (TAIR:AT1G47200.1); similar to MFP1 attachment factor 1 [Lycopersicon esculentum] (GB:AAF63657.1) 0.593353351010938 6.47986790640882 5.45265633298691e-05 0.00117209650309406 10.2925081439672 7.3507898404053 0.593353351010938 0.0743509040832856 AT5G41240_at 3.11753316665946 2.60779248156624 3.71622504056822 3.61429516551317 3.7455655977429 3.65175010151807 2.95212985349328 2.96999939704642 2.62822304435221 2.55105315953035 2.79339706019467 2.80057757146478 2.86328987781750 3.07022984149588 2.71008020954065 3.18164032820536 2.9595619979131 3.1349712364458 2.16892658913459 0.225083604113215 0.226409886616091 0.23911531022907 0.229201668024359 0.240521144763394 0.238789459655078 0.22431588514902 0.226183732945974 0.229211089345627 0.22962623349848 0.22431588514902 0.229214137899183 0.225977626500033 0.232316149478617 0.23189995964159 0.22431588514902 0.254466509603936 0.227488514116588 0.233567273960209 5 5|0 -|/ 16516785 16517637 16517121 16515383 16518086 - gene protein_coding_gene TRUE TRUE AT5G41240.1 ATGSTT2 (Arabidopsis thaliana Glutathione S-transferase (class theta) 2); glutathione transferase Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTT3 (Arabidopsis thaliana Glutathione S-transferase (class theta) 3), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41220.1); similar to glutathione S-transferase GST 23 [Glycine max] (GB:AAG34813.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.62995641801162 6.47767814034786 5.46855631947065e-05 0.00117493183068627 10.2896395821901 5.99122107370869 0.62995641801162 0.091464904385446 AT5G64010_at 5.31559211745835 5.77920971208897 6.49247106675971 6.27911398343331 5.48743734506037 5.61153131407422 3.86226525450152 4.32089172806544 4.74421219779675 4.49101031375928 4.68359443026856 4.95354125326035 4.92966347062095 5.09963881691029 5.07209736752193 5.17683955149113 4.57876821175558 5.09189370041444 4.83467712688456 0.253654230525138 0.250833615557953 0.251898202898049 0.257496691962131 0.256037095818187 0.256352353953943 0.256325816122503 0.246395054414745 0.272930003471061 0.253374945125991 0.246063038340488 0.246063038340488 0.254537052648222 0.24693850838127 0.246063038340488 0.246063038340488 0.251568820398527 0.246063038340488 0.251017396802292 5 5|0 -|/ 25636194 25637020 25636631.143 25635832 25637405 - gene protein_coding_gene TRUE TRUE AT5G64010.1 unknown protein 0.703218389218439 6.47377676862701 5.49700783032056e-05 0.00118045973767285 10.2845270902451 10.2126746383939 0.703218389218439 0.120667639875539 AT5G02840_at 10.1228539323557 10.1391476387437 10.8310565515372 10.8972218500589 11.3412214751251 11.5112633655889 10.4105745846676 10.5676500158455 10.9971757366752 10.6025051227396 11.2927940719869 10.8678894714616 11.3283985093063 11.2141933384190 10.7587911147293 11.3166873568204 11.1438781629931 11.0436986924718 11.0294020641439 0.0580351044565003 0.0585063086173532 0.058435235144651 0.0576188994595054 0.0582010433616342 0.0632933121825522 0.0562020105789342 0.0579267723135069 0.0617553948634074 0.0595947782212206 0.0580032882177279 0.0556931781005614 0.0571087781454455 0.0564641045518035 0.0593050531742166 0.0556931781005614 0.062907987710362 0.0590510841029323 0.0561343076043141 5 5|0 +|/ 649797 650475 650088.571 648702 651970 + gene protein_coding_gene TRUE TRUE AT5G02840.1|AT5G02840.2|AT5G02840.3 myb family transcription factor|DNA binding / transcription factor similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G09600.2); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G09600.1); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.539782316464212 6.47281594120169 5.50403921302972e-05 0.00118138456456733 10.2832676444692 21.7261998338869 0.539782316464212 0.0417597316710873 AT5G66590_at 6.95561852906711 7.15730516443287 7.8267033560812 7.95835368143195 8.19633114747456 8.4503127640801 7.71877368658203 8.36740579074476 8.30573006178423 8.39917504452587 9.52317624831301 9.59434873535507 10.1049993975310 9.30564649506905 9.98746294245958 9.94519144396734 9.53437430650942 9.42062752631714 9.66819929242475 0.166128013643844 0.165553357001442 0.153661866493626 0.161348401640262 0.153475915873706 0.152548200439197 0.154378091351908 0.149204591510156 0.160125812147988 0.149204591510156 0.151014536917414 0.149204591510156 0.153181545412929 0.149204591510156 0.158106387216856 0.153988764595027 0.153654155835690 0.152795757967903 0.149204591510156 5 5 + 26591536 26591945 26591709.545 26591407 26592100 + gene protein_coding_gene TRUE TRUE AT5G66590.1 allergen V5/Tpx-1-related family protein similar to allergen V5/Tpx-1-related family protein [Arabidopsis thaliana] (TAIR:AT4G25790.1); similar to STS14 protein precursor (GB:Q41495); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) 0.722046515961088 6.47235397693882 5.50742332722832e-05 0.00118152601548679 10.2826620565269 17.0628571082461 0.722046515961088 0.127549572823095 AT5G42010_at 3.55440768010907 3.5289353897155 4.91648921989796 4.65673841394576 3.90681414759941 4.07317211826581 2.83989796559968 3.01349577655201 3.20110893852087 2.85571238030698 2.67745087909707 2.63443723753908 2.91414456024251 3.15648900350968 3.0601446668726 2.80103735669269 3.09490752596342 3.15509681326215 2.80596675467812 0.234424636913171 0.230214351592528 0.24975178507516 0.259244476841181 0.236041943428155 0.246501640487721 0.235477021157363 0.239807552856258 0.237423665669498 0.234216808445412 0.230951653328397 0.230020060349015 0.238092630678206 0.231063390036385 0.240325185021172 0.230291584632407 0.243036660295904 0.235256294344723 0.236912946940691 5 5 + 16821303 16821916 16821682.455 16819508 16822241 + gene protein_coding_gene TRUE TRUE AT5G42010.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G64610.2); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.568285043080956 6.4675093973477 5.54304709433826e-05 0.00118858038685217 10.2763094119263 6.75673193724368 0.568285043080956 0.0614113663292128 AT5G08330_at 9.58538592856361 9.72433962428806 9.60727944967308 9.60263393691917 10.4504077055511 10.2599336888662 9.79602023683991 9.81473281630437 10.5087755654176 9.68503669153342 11.4222483065154 11.1099089128213 10.8354212840770 11.1505995834499 11.1367454255327 10.4418273081309 10.1365288513582 11.0571922144408 10.0637074270101 0.0989812324665404 0.0996953053334255 0.106761943912416 0.106554041246341 0.0967485049067719 0.102661447836366 0.101028146227793 0.0971969278765484 0.103074371268169 0.100260379195003 0.0993199170454453 0.0994985877706767 0.0997581223188424 0.100055139500653 0.098867232734472 0.0976250474639776 0.103618562911917 0.0978508121626578 0.0973098243403643 5 5 + 2680965 2681463 2681164 2680745 2681814 + gene protein_coding_gene TRUE TRUE AT5G08330.1 TCP family transcription factor, putative similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G23280.1); similar to unknown [Brassica rapa] (GB:ABB97033.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) 0.537706567445216 6.45987225871317 5.59970877844716e-05 0.00119954370409431 10.2662878830123 20.3536661135979 0.537706567445216 0.0409376607209018 AT5G58020_at 8.64631407709397 9.21158768930368 9.59514373322797 9.62801681246527 9.96830358809404 9.6412370485267 9.15347706168233 9.17776847652786 8.9068605084613 8.81618123950437 9.49187991506883 9.6500530966696 9.67684384320467 9.78156556907907 9.28556197495195 9.6744951218121 9.12671184038933 9.45364234790826 8.7231177411559 0.132004579765304 0.124722814439912 0.130658490197886 0.124722814439912 0.13160787716632 0.125752502363408 0.132517184807733 0.128891268763169 0.133080350582508 0.131724390910261 0.124821882142072 0.124722814439912 0.124722814439912 0.125279715566587 0.130390562430967 0.124722814439912 0.136692364513891 0.136445344549007 0.135036784277317 5 5 + 23503280 23503851 23503545.364 23502726 23504044 + gene protein_coding_gene TRUE TRUE AT5G58020.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54721.1); similar to Os06g0183900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056989.1); contains InterPro domain Protein of unknown function DUF602; (InterPro:IPR006735) 0.681548093344079 6.45658100001798 5.62431882284158e-05 0.00120422058328738 10.2619664063629 18.5442214158699 0.681548093344079 0.113238791026850 AT5G60230_at 3.70150726930492 4.02879260840216 4.46777163783956 4.20585230001321 4.60170754441843 4.73498268659783 4.13641823413461 3.82099192210972 4.08683998538805 3.69515016807383 4.19571515380136 4.59509150860287 5.09846813521884 5.02033665172873 4.82687877211005 4.56284131720623 4.40572029831272 4.60264557109883 4.15256949452246 0.219341974235025 0.221500669112283 0.218184402027456 0.212860373881078 0.212860373881078 0.213065833768868 0.216289909214243 0.21401164058328 0.213081117335594 0.220275118260834 0.215850743333619 0.215878208212641 0.218482919422121 0.220781957243748 0.217362282413707 0.220372878564854 0.217971322106196 0.220817159674587 0.224495253982338 5 5 - 24267429 24267978 24267719.455 24267317 24268839 - gene protein_coding_gene TRUE TRUE AT5G60230.1|AT5G60230.2 SEN2 (SPLICING ENDONUCLEASE 2); tRNA-intron endonuclease putative subunit of tRNA splicing endonuclease Identical to tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (AtSen2) (tRNA-intron endonuclease Sen2-2) (SEN2) [Arabidopsis Thaliana] (GB:Q9LSS3;GB:Q3E887); similar to ATSEN1 (SPLICING ENDONUCLEASE 1) [Arabidopsis thaliana] (TAIR:AT3G45590.2); similar to tRNA intron endonuclease, catalytic C-terminal [Medicago truncatula] (GB:ABE94660.1); contains InterPro domain tRNA-intron endonuclease; (InterPro:IPR006676); contains InterPro domain tRNA intron endonuclease, catalytic C-terminal; (InterPro:IPR006677) 0.632963330205623 6.45615009209366 5.62754947813308e-05 0.00120431757283196 10.261400498789 8.53307738802159 0.632963330205623 0.0936693365119405 AT5G23080_at 4.89081684949011 4.53395194407604 6.06162584772787 5.15623648415153 6.57032097356403 6.67847657779521 4.84379505908747 4.55065972569769 5.43420139483707 5.66999345574215 5.65700410075817 5.95723988596681 5.91442519661525 5.38565277054905 6.08438666054687 5.95385806062428 6.19884696733942 5.88199414265885 5.55476362718172 0.208653629938616 0.210546374715957 0.200551495604656 0.214128826685096 0.214965130652267 0.206268479696889 0.208516802000268 0.214214927047427 0.209851545610572 0.208606572464854 0.203759611111031 0.200551495604656 0.203631814422097 0.207670749707126 0.224383394684504 0.200551495604656 0.204810026559209 0.203654762687477 0.202933440395046 5 5 - 7743281 7743753 7743540.182 7742943 7748936 - gene protein_coding_gene TRUE TRUE AT5G23080.1|AT5G23080.2 TGH (TOUGH); RNA binding Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to PREDICTED: similar to G patch domain containing 1 isoform 2 [Canis familiaris] (GB:XP_853864.1); similar to Os06g0489200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057672.1); contains InterPro domain Protein of unknown function DUF1604; (InterPro:IPR011666); contains InterPro domain SWAP/Surp; (InterPro:IPR000061)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to PREDICTED: similar to CG8833-PA [Apis mellifera] (GB:XP_624553.2); similar to Os06g0489200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057672.1); contains InterPro domain Protein of unknown function DUF1604; (InterPro:IPR011666); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) 0.869024445050265 6.45535827667056 5.63349116775511e-05 0.00120499435239457 10.2603605431031 11.1268164988917 0.869024445050265 0.176880865746504 AT5G61260_at 1.77805871831851 1.82501632409254 2.50319662535353 2.39431698822987 2.53779793065387 1.87170864560519 0.621760831770685 0.703394560522361 1.27741262630864 0.966972446449001 1.7120990185492 1.86570069062834 1.06828251727718 1.40286990125481 1.68859659030723 1.52399954143771 1.02953524977607 1.77267771061908 1.40139021900116 0.223142682171472 0.226512812011319 0.234574852141640 0.222794838162358 0.223267241456661 0.227870210333532 0.224044478904225 0.226243709477536 0.228497638739747 0.222948681433070 0.230386063081718 0.222019822853427 0.222019822853427 0.226831788260436 0.230459028873278 0.222862527629941 0.225284046939527 0.235328996319077 0.231453668544613 5 5 + 24655227 24655801 24655513.909 24654335 24655825 + gene protein_coding_gene TRUE TRUE AT5G61260.1 chromosome scaffold protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07820.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to HMG box family protein [Tetrahymena thermophila SB210] (GB:XP_001033066.1); similar to Micronuclear linker histone polyprotein (MIC LH) [Contains: Micronuclear linker histone-alpha; Micronuclear linker histone-beta; Micronuclear linker histone-delta; Micronuclear linker histone-gamma] (GB:P40631); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.693704580339765 6.45405344572373 5.64329716308158e-05 0.00120624024097855 10.2586466003539 3.14102061960205 0.693704580339765 0.117931235753064 AT5G10320_at 3.6132632357141 3.43188196988327 3.95526340518716 4.461324255819 5.30597344757318 4.60375626560808 3.89470934955151 3.18491575698039 2.85300535068408 3.48685608538216 3.76529396909505 4.16251292369635 4.06818960731707 4.82896913816792 3.51028339442528 4.40764870920084 4.85033599240054 3.75651704501913 3.72555603907233 0.242691693931014 0.238673568761583 0.249675894638104 0.238907350852665 0.243705641430346 0.248851620036071 0.251732162591693 0.251129836514184 0.254902196066152 0.240859450101438 0.241074659243578 0.236682678966120 0.242981261421847 0.242308272780820 0.242490510911803 0.244008936330952 0.241246781299927 0.237229007047130 0.236682678966120 5 5|0 -|/ 3244183 3245347 3244625.5 3243957 3246722 - gene protein_coding_gene TRUE TRUE AT5G10320.1|AT5G10320.2|AT5G10320.3 similar to 80A08_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67614.1) 0.931983227275141 6.45384304853421 5.64488004344965e-05 0.00120624024097855 10.2583702124789 7.81831496368698 0.931983227275141 0.196240681988477 AT5G08370_at 8.50209059549172 8.25481761385381 9.23725374242485 8.8635464087845 9.27171671054198 9.28186979448558 8.78229108329143 8.57557022338043 8.57789145628824 9.07889935543006 9.37592094297054 9.38019931654275 9.36751536555812 8.97849031066005 9.51304157741693 9.30299976270875 9.520356932854 9.71514368913764 8.74671203027058 0.113747711621355 0.111426099008986 0.111292406330763 0.113451097659113 0.106997059769099 0.107567056787092 0.109713212827789 0.112415725310577 0.11620986750181 0.113368178836625 0.113272161770931 0.114300970750016 0.106938901702743 0.113393613827997 0.117587405413320 0.108124770368767 0.108774389305260 0.109062799208209 0.118898346436377 5 5|0 -|/ 2691141 2692214 2691476.5 2690880 2693551 - gene protein_coding_gene TRUE TRUE AT5G08370.1|AT5G08370.2 ATAGAL2 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 2); alpha-galactosidase similar to ATAGAL1 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 1), alpha-galactosidase [Arabidopsis thaliana] (TAIR:AT5G08380.1); similar to acid alpha galactosidase 2 [Cucumis sativus] (GB:ABC88435.1); contains InterPro domain Glycoside hydrolase, family 27; (InterPro:IPR002241); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111) 0.613972579144845 6.45273990420675 5.65318712918254e-05 0.00120742027980918 10.2569209619927 17.9438325721455 0.613972579144845 0.0854192101789502 AT5G04980_at 5.98245887364045 5.85459340261275 7.39829559539269 6.93109367597551 8.06921886963269 7.4720123902815 7.56480215446904 6.94933724013614 4.79953624385994 5.26530757064686 5.95256794648038 5.4600532233822 6.23392514252879 6.1550654459986 5.07153198265125 6.30848361313432 7.03643593255275 5.94511857564233 5.5475599122495 0.274838656654038 0.265197177469126 0.271078374590182 0.280574388741783 0.265781398297692 0.267304936854135 0.268328535282714 0.264909030926164 0.270197745821463 0.268996161933248 0.270634030941652 0.265483261169385 0.262369449333057 0.276510991062812 0.269392064536012 0.264466159511895 0.270300170793159 0.2704167299526 0.269858040010138 5 5|0 -|/ 1468682 1469419 1469070.222 1468576 1470773 - gene protein_coding_gene TRUE TRUE AT5G04980.1|AT5G04980.2 endonuclease/exonuclease/phosphatase family protein similar to BST1 (BRISTLED1), hydrolase [Arabidopsis thaliana] (TAIR:AT5G65090.1); similar to putative inositol-1, 4, 5-trisphosphate 5-phosphatase [Oryza sativa (japonica cultivar-group)] (GB:BAB90404.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135)|similar to BST1 (BRISTLED1), hydrolase [Arabidopsis thaliana] (TAIR:AT5G65090.1); similar to Os05g0489000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055889.1); similar to putative inositol-1, 4, 5-trisphosphate 5-phosphatase [Oryza sativa (japonica cultivar-group)] (GB:BAB90404.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) 0.848060186158448 6.45182216602758 5.66010803804593e-05 0.00120830323964565 10.2557151509700 12.6399926794585 0.848060186158448 0.170446092844553 AT5G07950_at 3.64392843454088 3.8877865126115 4.84961146431006 5.0989508744551 5.38082150179375 4.78803736433302 3.88893258296387 3.80669452688002 3.50499998864176 3.48317744462758 3.5731619326895 3.80410216682434 3.98091605709824 3.2917337816199 3.23320354493992 3.95718387239909 4.33493679292204 3.86153181878301 3.75294673061147 0.234981771314286 0.241790548218094 0.237220162549519 0.249365270281630 0.258864552669911 0.258338017475278 0.238422873022204 0.236355552598904 0.251045462789295 0.241128969768376 0.238282468438341 0.233947461655721 0.233078178587520 0.237829753867082 0.244579714152946 0.233078178587520 0.238199364437562 0.239183543181274 0.239624440878222 5 0|5 /|- 2540689 2541513 2541044.9 2540285 2542137 - gene protein_coding_gene TRUE TRUE AT5G07950.1 similar to Os03g0213200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049360.1); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) 0.698370655794909 6.44900205187921 5.68143225001814e-05 0.00121225859209426 10.2520090403438 8.08558089133758 0.698370655794909 0.119869937160973 AT5G22790_at 2.47827181912238 3.01754898344139 3.26251563891160 3.30502954966728 3.37881681577808 3.55662919187925 3.20845162288901 2.65358681541235 2.66012201747082 2.91221783098869 3.38944802644704 4.12082284278387 3.59807308772549 3.33162117353513 3.59386549733005 3.42387585462368 3.67961748260452 4.15372645310621 2.53494704834767 0.228832825381031 0.219812752036998 0.224130116741962 0.226159663920650 0.219812752036998 0.227190681983442 0.226188018845262 0.219812752036998 0.227524497534955 0.233850453920000 0.223263663074722 0.219812752036998 0.223336705236247 0.224267118175873 0.221614213408185 0.219812752036998 0.243329162262083 0.221316138724962 0.219812752036998 5 5 - 7599402 7600606 7599988.364 7599149 7601693 - gene protein_coding_gene TRUE TRUE AT5G22790.1 similar to LCD1 (LOWER CELL DENSITY 1) [Arabidopsis thaliana] (TAIR:AT2G37860.3); similar to Os04g0524400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053349.1); similar to OSIGBa0153E02-OSIGBa0093I20.13 [Oryza sativa (indica cultivar-group)] (GB:CAH67884.1); similar to unknown [Euphorbia esula] (GB:AAF31706.1) 0.747617662754937 6.44604071906429 5.70391714029152e-05 0.00121645758783286 10.2481160796191 6.28951143857361 0.747617662754937 0.137588741389055 AT5G14730_at 1.60851976656891 1.64259934194416 2.03428163135849 2.00732326239042 2.25378024056865 2.54486643636004 0.978647063699344 1.04227149209676 1.54520716911838 1.28518301404833 1.50520877971157 1.74371325540643 1.65809915209913 1.89014619834509 1.15652208642472 1.83462401755264 0.981587203008506 1.66377708341587 1.20216496784089 0.161656174471125 0.163516774540227 0.162784267974048 0.167253283813216 0.161223199533628 0.163868174796843 0.163312969940219 0.163805783237495 0.163531816545686 0.168910625588448 0.166396440168830 0.162312386797871 0.163568745201034 0.164914844684869 0.171874173460352 0.162849671314845 0.160430438337597 0.164527822409411 0.165611785903469 5 5 + 4756463 4756977 4756721.727 4756221 4757660 + gene protein_coding_gene TRUE TRUE AT5G14730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01513.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84838.1) 0.551039074125865 6.43994956407209 5.7504671029688e-05 0.00122578221854155 10.2401045880693 3.21323354053903 0.551039074125865 0.0521085416267777 AT5G49580_at 8.04285843990188 7.82539778508923 8.7002747917273 8.48933760262592 8.6474543737222 8.67342364128117 7.74837140695185 7.4658134885949 8.2765006551604 8.17494333026723 8.68228662465824 8.54708295745561 8.68357930631434 8.41469646784218 8.4291553805395 8.74899835533797 8.71623046779856 8.3914166733205 8.34362742694615 0.129174055908784 0.130459031287519 0.123423156202240 0.122959944754967 0.124155792157528 0.133348798384302 0.130007702030753 0.134765938588515 0.131012777393044 0.133448644806705 0.1242195431535 0.122288708844975 0.132130635515795 0.125378947302270 0.127857749905124 0.12217795116786 0.129527154198221 0.12217795116786 0.125265076626756 5 5 - 20141090 20142013 20141410.636 20141049 20144039 - gene protein_coding_gene TRUE TRUE AT5G49580.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative [Arabidopsis thaliana] (TAIR:AT1G16680.1); similar to putative heat shock protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46232.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.584334648619228 6.43500173928147 5.78857963784958e-05 0.00123330002812657 10.2335928429898 16.6199687328783 0.584334648619228 0.0718326988481909 AT5G46270_at 6.12807145837455 6.49825913948603 7.25911107473231 7.06200267568322 7.58097075597576 7.05200927261552 6.71477135208072 6.50358228057914 5.7501674463479 6.1748195271581 6.34156381647456 6.41708420925038 6.60859438273796 6.81290160802765 6.15724619732646 6.98840651046682 7.17770441926542 6.37711928980134 6.0154368419245 0.193145869834809 0.194136189598693 0.19499957823701 0.20089797516239 0.188771469671543 0.192464640776271 0.191725192251896 0.188336069094604 0.199858447572843 0.188581361229138 0.190580308602908 0.190507738017692 0.186237832625773 0.191787829407078 0.195601035106571 0.190792389643906 0.220545174070251 0.194748956680622 0.188939946024684 5 5 - 18782245 18782673 18782451.182 18782099 18786068 - gene protein_coding_gene TRUE TRUE AT5G46270.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46520.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46510.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44392.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.703644334740126 6.43434530063698 5.79365644797247e-05 0.00123377540251638 10.2327286436336 13.1449566641804 0.703644334740126 0.122403817712214 AT5G25910_at 1.94528287448478 2.12884230446986 3.23347342772764 3.07442915706056 2.86118651053995 2.30118206721785 0.816636062148021 0.981503092873673 1.68469959772666 1.61440540706231 1.21820218674193 1.39675653810847 1.38532272575986 1.73515838444278 1.51972960139126 1.56981321835025 1.73585705412698 0.978610819820264 1.21096589445433 0.230572825583578 0.226011441360618 0.238248375441011 0.241877243022508 0.231637682381268 0.221471275393910 0.231231210413350 0.221643250668899 0.219587892225757 0.222108555103089 0.221770808640109 0.223095702171075 0.228461521442632 0.224689261981402 0.230509471986946 0.219587892225757 0.224157046788583 0.232169503363330 0.219587892225757 5 5 + 9040865 9041339 9041076.091 9038863 9041380 + gene protein_coding_gene TRUE TRUE AT5G25910.1 disease resistance family protein putative disease resistance protein induced by chitin oligomers. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G25930.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G11080.1); similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT3G11010.1); similar to Hcr2-p3 [Lycopersicon pimpinellifolium] (GB:AAX19025.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.669288028410353 6.4339524507239 5.79669698327527e-05 0.00123381689260502 10.2322114275076 3.64071107831887 0.669288028410353 0.109418627910511 AT5G20840_at 8.37883160896928 8.18983273684759 9.08194797524184 8.94594579659501 9.4596980186389 8.77902444881283 9.00932070280978 8.49922396341299 8.2038170327189 8.11825299424175 9.26292092342264 9.1606453440905 9.39646251538862 9.4705473900949 8.88506821407223 9.29996646129716 8.93777879894756 9.38613617816029 8.25290062645072 0.136515757466814 0.131109934041751 0.130901570530077 0.128753131301057 0.130624986371859 0.133518244179546 0.128911736816123 0.129189941554097 0.139027532530698 0.138959526488248 0.130476512195472 0.131099607972948 0.127371633889190 0.134872009971087 0.129611750947803 0.132178694005223 0.156822152404974 0.131500077251791 0.144977412156017 5 5|0 -|/ 7061641 7063271 7062487.2 7061105 7069221 - gene protein_coding_gene TRUE TRUE AT5G20840.1 phosphoinositide phosphatase family protein similar to ATSAC1 (SUPPRESSOR OF ACTIN 1), phosphoinositide 5-phosphatase [Arabidopsis thaliana] (TAIR:AT1G22620.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G43220.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G14205.1); similar to Os03g0182400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049173.1); similar to Putative phosphoinositide phosphatase [Oryza sativa] (GB:AAK92639.1); similar to SacIy domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94324.1); contains InterPro domain Synaptojanin, N-terminal; (InterPro:IPR002013) 0.790317825263006 6.43148668322055 5.81582040705654e-05 0.00123727987718438 10.2289645399075 17.5012769627434 0.790317825263006 0.152615411607800 AT5G55540_at 5.83523248866547 5.56026300313217 5.21590131993146 5.57564825799218 6.55686088068181 6.58331885268409 5.9844906881024 5.85313740507689 6.1210893596181 5.8535746045783 6.76332124248884 7.47138319613064 6.92563172392307 7.02524841882073 7.21544031402879 6.61847951907965 6.74891714198066 6.97718673682417 5.83145075279215 0.192217613857655 0.178183779253706 0.186116945488674 0.191818112273760 0.178102330814763 0.180098969593088 0.186371074464974 0.176564396496213 0.181761917432842 0.177812840480632 0.179699600193073 0.179772447203372 0.178010695894392 0.182255779273702 0.188809390759513 0.180785837482102 0.185667531142878 0.183496015105285 0.198007285227487 5 5 - 22513548 22514064 22513813.545 22513422 22517769 - gene protein_coding_gene TRUE TRUE AT5G55540.1 TRN1 (LOPPED 1, TORNADO 1) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. similar to EMB2004 (EMBRYO DEFECTIVE 2004), protein binding [Arabidopsis thaliana] (TAIR:AT1G10510.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAR87265.1); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor type; (InterPro:IPR007091) 0.6037404479541 6.42878426645211 5.8368569842319e-05 0.00124114627697271 10.2254050028308 12.3473929165279 0.6037404479541 0.0817176851686447 AT5G42960_at 5.18003512456372 5.89958911909797 6.48018182066835 6.40002079875094 6.56801817477737 6.57949088089803 5.96823581873512 6.07598530343551 5.31142454887054 5.36916946572196 5.75936839536387 5.74542402003635 6.20137816444704 6.04109117054889 5.42591151743857 6.17734735737237 5.89740521888726 5.95073115448689 4.91410430693226 0.185680479096761 0.182319882151576 0.188489869750327 0.181123317074204 0.193839347002702 0.190753865420829 0.190192638530135 0.191682486329932 0.182294772914413 0.198288867172680 0.182585948095895 0.186124334939876 0.192090022002517 0.180121102143978 0.195345828382561 0.182424427902333 0.193677632700153 0.190585770451227 0.206590331787783 5 5 + 17252462 17253628 17252819.091 17252320 17253907 + gene protein_coding_gene TRUE TRUE AT5G42960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45170.1); similar to pore protein of 24 kD (OEP24) [Pisum sativum] (GB:CAA04468.1) 0.713782964148329 6.41967359788568 5.90838160913786e-05 0.00125507917074587 10.2133967573649 11.692977079448 0.713782964148329 0.126687989450066 AT5G05690_at 10.9771429591481 11.2821512082387 11.5486537040649 11.6521135958741 12.0204520486493 12.0463907450476 10.8892657330711 11.2173406851594 11.9232690783285 11.7807477193497 12.5398024983679 12.3689765606750 12.5761974169928 12.3275794952799 12.1615383029444 12.3519532824376 12.1653575250905 12.0793218863756 11.8445641543569 0.0741839901134076 0.0710973173529542 0.0725018489667063 0.0724252827532113 0.0718093986270755 0.0746205442097503 0.0728248757434126 0.0717864089497101 0.0811299951075546 0.0717192546805748 0.075900132803377 0.0710973173529542 0.0710973173529542 0.07263983599644 0.0713237139743389 0.0710973173529542 0.0824177197266183 0.0749504356193317 0.0730338079316435 5 5 - 1702908 1705539 1703415.455 1702689 1706788 - gene protein_coding_gene TRUE TRUE AT5G05690.1|AT5G05690.2|AT5G05690.3 CPD (CABBAGE 3); oxygen binding|CPD (CABBAGE 3) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to DWF4 (DWARF 4) [Arabidopsis thaliana] (TAIR:AT3G50660.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); similar to cytochrome P450 [Vigna radiata] (GB:AAF89209.1); similar to cytochrome P450 [Nicotiana tabacum] (GB:CAD27417.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to DWF4 (DWARF 4) [Arabidopsis thaliana] (TAIR:AT3G50660.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to CYP90D1 (CYTOCHROME P450, FAMILY 90, SUBFAMILY D, POLYPEPTIDE 1), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding [Arabidopsis thaliana] (TAIR:AT3G13730.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.598620632006718 6.41950240502986 5.90973455446134e-05 0.00125507917074587 10.2131710003468 23.5396227624227 0.598620632006718 0.0796878622692437 AT5G60640_at 10.0948627359254 10.1945115479639 10.7437319185097 10.7540796692938 10.8701707266698 10.5232767294845 9.953371264388 9.95982758020126 10.1247323007678 10.1333530019379 10.6965840918550 10.7034026079068 10.5125661530766 10.5049568987249 10.6597695110762 10.5483005807831 10.2511081777018 10.7892074994941 10.1127208453023 0.0756008931196601 0.0755025515787082 0.0780274796546887 0.0749586894187312 0.0754257464835953 0.0787806177951362 0.0774373850410547 0.0762126785316887 0.076822846496793 0.0753480956661882 0.0742393200007518 0.0741095035203875 0.0773814790564115 0.0779817306476873 0.07498974005252 0.0737551645374543 0.0805503587067193 0.0760242427376947 0.0740595181157703 5 5|0 -|/ 24388399 24389196 24388711 24388185 24391264 - gene protein_coding_gene TRUE TRUE AT5G60640.1|AT5G60640.2 ATPDIL1-4 (PDI-LIKE 1-4); thiol-disulfide exchange intermediate Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. similar to ATPDIL1-3 (PDI-LIKE 1-3), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G54960.1); similar to protein disulphide isomerase [Elaeis guineensis] (GB:AAO26314.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792)|similar to ATPDIL1-3 (PDI-LIKE 1-3), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G54960.1); similar to protein disulphide isomerase [Elaeis guineensis] (GB:AAO26314.1); similar to Os02g0100100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045579.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792) 0.565903184805553 6.41933413037985 5.91106476112311e-05 0.00125507917074587 10.2129490874228 20.7401485162612 0.565903184805553 0.0624950424349844 AT5G12130_at 8.65209359265005 8.87909642923432 9.27387432664868 9.1026517090753 9.49569575424423 9.16767651616076 9.08842497198923 9.07246300490267 9.10724511842546 8.65337972091237 9.79800103594412 9.99161041484571 9.4489044728662 9.62077060648816 9.61406338408872 9.92817416588672 9.2368714865133 9.62276335356958 8.68834637740472 0.166165332604685 0.153814639241501 0.171413403147736 0.163352712272978 0.153026903148540 0.159986407129466 0.158658795973885 0.154438925282633 0.171084632569997 0.161380355998352 0.156694556778139 0.155521468796365 0.158884955867840 0.170712591866617 0.162796181944645 0.153026903148540 0.165600999597102 0.164313348018116 0.161145723054852 5 5|0 +|/ 3920681 3922096 3921334.444 3919595 3922486 + gene protein_coding_gene TRUE TRUE AT5G12130.1 PDE149 (PIGMENT DEFECTIVE 149) similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57657.1); similar to Os05g0121200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054496.1); contains InterPro domain Integral membrane protein TerC; (InterPro:IPR005496) 0.589138101474653 6.41605656524372 5.93703801477294e-05 0.00125997696523749 10.2086259479693 18.3284813400829 0.589138101474653 0.0751740530996244 AT5G06850_at 4.25152796127009 4.67448765724627 5.1193090099138 5.19497802787359 5.0633776333019 5.34797105293912 4.23007091906554 4.57404281786682 4.6021759596863 4.65387486770752 5.20982375408658 5.3867479048775 5.45080479887737 5.30189218664791 4.40126130484874 5.50051131621147 5.6734222403763 5.66972766653869 4.99562410203705 0.223547532103157 0.205181849379939 0.218259159337504 0.207970510893866 0.218435057090975 0.212649083644908 0.21359623610739 0.212936346982025 0.236226637887021 0.225359537262172 0.205644799338914 0.224437305001855 0.216655068104462 0.219120741303360 0.226285408516086 0.209449915192846 0.216466282494903 0.212823515523145 0.238672874988103 5 5 - 2127293 2127743 2127516.273 2126976 2129325 - gene protein_coding_gene TRUE TRUE AT5G06850.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48060.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to H0305E08.5 [Oryza sativa (indica cultivar-group)] (GB:CAH67434.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to C2 [Medicago truncatula] (GB:ABE85066.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.661296089446351 6.41048110640507 5.98150288184075e-05 0.00126817195967417 10.2012682094559 9.84438673811882 0.661296089446351 0.107228388012819 AT5G18580_at 9.33589563057453 9.3645833290278 9.6645965147574 9.8881325000804 10.0346349511819 10.0992832740033 9.15323682626137 9.52673422419093 9.36196573204693 9.22183594968155 10.0121522597992 9.91103203894469 9.94597997184226 9.87775633781423 9.68049308842383 10.014566335856 9.89872936650022 9.9037990403169 9.31830835963143 0.104757145551623 0.0989743550051823 0.100121101499095 0.100005703780555 0.0984983953128493 0.107272446118871 0.0993330474437073 0.0967054072364174 0.104923686440111 0.09835450679968 0.0975329692624867 0.0988294607075702 0.099443171009989 0.09779818229943 0.100372303547893 0.0985597845156857 0.102403289875806 0.100276596663978 0.100679172326480 5 0|5 /|+ 6177511 6178154 6177827.111 6174998 6178403 + gene protein_coding_gene TRUE TRUE AT5G18580.1 FASS (FASS 1) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to hypothetical protein LOC362739 [Rattus norve (GB:NP_001014218.1); similar to Os05g0149800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054660.1); similar to PREDICTED: similar to chromosome 14 open reading frame 10 [Gallus gallus] (GB:XP_421240.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.590704757654636 6.40833148765601 5.99874166189084e-05 0.00127120523382593 10.1984302024369 19.2365206072883 0.590704757654636 0.0763151510566569 AT5G37660_at 0.628362132226653 0.840492372043792 1.86474772384002 0.96697749301161 0.9494295762432 1.07900638465335 1.08822913472634 0.836797808406936 0.903434152959998 0.71234359725239 1.90048552368879 2.44652905389266 1.78000212180108 1.98994943878885 2.827363072492 2.16349007603335 1.9227419438712 1.99663749226902 0.880491052832126 0.231820789974079 0.235479465211951 0.230295759709646 0.239948447485504 0.233074300740835 0.233847259574305 0.231939660917517 0.234487574934770 0.240484037806975 0.237040393375152 0.243279581859073 0.237078988224982 0.244944367274051 0.238726454006907 0.261100514018434 0.239852625229806 0.23321941423701 0.233327489529085 0.233041502912185 5 5 + 14977245 14977787 14977475.727 14977027 14978824 + gene protein_coding_gene TRUE TRUE AT5G37660.1|AT5G37660.2 receptor-like protein kinase-related similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G01660.1); similar to Os04g0537800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053427.1); similar to receptor-like protein kinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25786.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 0.831440085962948 6.40796255666903 6.00170564594004e-05 0.00127121202181111 10.1979430571125 2.51200004882872 0.831440085962948 0.166977438924047 AT5G16560_at 3.93759772796784 3.74009771789089 3.64935900079133 3.89328066428154 4.45623761991238 3.79415757076075 3.26411515202819 3.72635204865211 3.32762879867527 3.50256522037454 4.88289353999842 4.87393448048041 4.64582117272487 4.97926209240698 4.29131478961275 5.23248924048465 4.12090512808211 4.14603901713327 3.27742756369761 0.221475002294737 0.216880900351671 0.215974186372132 0.219203193580444 0.227102676783082 0.218218983876503 0.220702506166730 0.228975169229071 0.235720059852649 0.220998613797262 0.217766200479895 0.215268898013458 0.230230734550344 0.219579753754038 0.220102702494358 0.220222862543724 0.224153825616896 0.225890417731527 0.232928961429105 5 5|0 -|/ 5408244 5410455 5409420.7 5406866 5411427 - gene protein_coding_gene TRUE TRUE AT5G16560.1 KAN (KANADI); transcription factor Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule. similar to KAN2 (KANADI 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32240.1); similar to myb-like DNA-binding domain, SHAQKYF class, putative [Medicago truncatula] (GB:ABE90149.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.779296645334018 6.40750795308805 6.00536008359074e-05 0.00127136497567230 10.1973427598986 7.81554450121791 0.779296645334018 0.149921378508659 AT5G50170_at 2.41423843763518 2.35004347525213 3.07752340649846 3.12158643325136 3.10765633584188 2.88940974077888 2.97326932595977 2.58816181537725 1.57168273778955 2.60378129298355 2.99671376653842 2.70462921705279 2.81582089167508 2.88691534672384 3.05376877534677 3.20941786884528 3.28611834082821 3.02192613695321 2.65805455346618 0.226023620812429 0.225107126294455 0.226494196901411 0.224560195160431 0.226574703573093 0.229576042416962 0.234417155225322 0.232019875596640 0.225396555841531 0.221659868763169 0.224872455022416 0.220683650891147 0.237782769428300 0.228792900107157 0.228993214216358 0.225416528477818 0.231925504148682 0.224131103003120 0.222598790817582 5 5|0 +|/ 20441946 20442726 20442239.2 20438299 20442812 + gene protein_coding_gene TRUE TRUE AT5G50170.1 C2 domain-containing protein / GRAM domain-containing protein similar to C2 domain-containing protein / GRAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G03370.1); similar to no pollen; Osnop [Oryza sativa (japonica cultivar-group)] (GB:AAU09489.1); similar to OSIGBa0106G07.15 [Oryza sativa (indica cultivar-group)] (GB:CAH67319.1); similar to OSJNBa0022H21.21 [Oryza sativa (japonica cultivar-group)] (GB:CAE05501.2); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973); contains InterPro domain GRAM; (InterPro:IPR004182) 0.593344990226127 6.40491914348478 6.02621640998835e-05 0.00127507926719274 10.1939236917613 5.45261278186197 0.593344990226127 0.0777787663923996 AT5G16120_at 8.43940298207682 8.3621481837391 8.76467017832637 9.01607145893001 9.70563908554974 8.96206015127696 8.27660037748683 8.05075687792196 7.63168698745079 7.75385847224563 8.15899588356679 8.40469423062582 8.50928964445135 8.46620990476076 8.24452615441025 8.64289776836674 8.30449437637445 8.18219827141312 7.66354120348853 0.168663854290749 0.15928132771802 0.193838691391095 0.168713612141832 0.176556405794047 0.17597884457359 0.16070999153781 0.168484216192441 0.169100610960957 0.163439851444626 0.172857493138316 0.164322740799424 0.156542656748552 0.179622296145999 0.178569949299972 0.159708040251267 0.168321623407840 0.161894916598176 0.161869982422704 5 5 + 5266945 5267724 5267377.818 5265942 5267982 + gene protein_coding_gene TRUE TRUE AT5G16120.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G77420.1); similar to Alpha/beta hydrolase [Medicago truncatula] (GB:ABE78761.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.755508752366217 6.40460079691359 6.02878648004956e-05 0.00127507926719274 10.1935031794992 16.7207647454007 0.755508752366217 0.141977174971702 AT5G17380_at 8.93711573510847 9.1215208246186 10.0016704693066 10.1687484661836 9.53211029455443 9.38577599900782 9.01314949360299 9.31241820903122 8.77582037618516 9.03959240559372 9.32205448469296 9.19733875160364 9.32426880849799 9.3059138985921 9.11806257065171 9.55922234570213 9.29618186365169 9.36046451748928 8.65388472458912 0.105130129885670 0.102447965501880 0.102694407852911 0.103646491036606 0.104098874537989 0.107419986349921 0.105141249361067 0.106056931527575 0.123085062584649 0.108361555682505 0.104037392127509 0.102447965501880 0.102447965501880 0.109212684157527 0.110043572896594 0.102447965501880 0.105021892983844 0.106802063721786 0.109079236357776 5 5 - 5724988 5725539 5725237.455 5724761 5726748 - gene protein_coding_gene TRUE TRUE AT5G17380.1 pyruvate decarboxylase family protein similar to CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1) [Arabidopsis thaliana] (TAIR:AT3G48560.1); similar to Os01g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043144.1); similar to COG0028: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Escherichia coli E24377A] (GB:ZP_00700406.1); similar to thiamine pyrophosphate enzyme-like TPP binding re (GB:ZP_01503010.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain TPP-binding enzymes; (InterPro:IPR000399); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766); contains InterPro domain 2-hydroxyphytanoyl-CoA lyase/oxalyl-CoA decarboxylase; (InterPro:IPR012275) 0.58168223899682 6.40316043360924 6.04042950633874e-05 0.00127691886248013 10.1916003784058 18.5008324733765 0.58168223899682 0.0719574077923025 AT5G63310_at 9.87286053948904 9.95274047811124 10.1295410477928 10.0658287654357 10.2918734965329 10.1666391743028 10.1252939158417 10.3661589110056 10.0818690644685 10.3703776950861 11.1677127536689 11.6215327736596 10.9228628087088 11.0160277971461 11.8416698097444 11.1411446995707 10.8827557371022 11.1991168956964 10.2034825328504 0.091138431990472 0.0872621994275508 0.0921094769754279 0.0901855814697219 0.0925488226389728 0.0947721974319338 0.096220573572671 0.0898796742969754 0.102930433802707 0.0927919844402118 0.0895098519585046 0.0908336100216668 0.0872621994275508 0.0950100495756401 0.0922391201384255 0.0899317270234443 0.0920024298507116 0.0872621994275508 0.0951947680406454 5 5|0 -|/ 25389363 25390586 25389922.889 25389130 25391087 - gene protein_coding_gene TRUE TRUE AT5G63310.1 NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2); ATP binding / nucleoside diphosphate kinase Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning. Identical to Nucleoside diphosphate kinase II, chloroplast precursor (EC 2.7.4.6) (NDK II) (NDP kinase II) (NDPK II) (NDPK Ia) (NDPK2) [Arabidopsis Thaliana] (GB:O64903;GB:O65212;GB:Q9SMX6); similar to NDPK1 (nucleoside diphosphate kinase 1), ATP binding / nucleoside diphosphate kinase [Arabidopsis thaliana] (TAIR:AT4G09320.1); similar to nucloside diphosphate kinase 2 [Brassica rapa] (GB:BAC05487.1); contains InterPro domain Nucleoside diphosphate kinase; (InterPro:IPR001564) 0.544866819257319 6.40019921157455 6.06444210585686e-05 0.00128137026106131 10.1876874710307 20.8427067111709 0.544866819257319 0.0501976787645921 AT5G53170_at 8.96144783503226 9.17633003573455 10.1821358785498 10.0792678923132 10.1140550363383 9.8878928106849 9.79309267587878 9.55724096472854 8.84996584914644 9.6977193676598 9.76815910600304 9.71992435126848 9.79535761487305 9.82150593984605 9.44586448150448 10.2161019147920 10.1203041213064 9.7234328311183 9.54798382919862 0.123382782184516 0.122563969824191 0.126282547532191 0.129872264549046 0.124946885424573 0.133023364623004 0.124461456588925 0.129058542961257 0.153812271385164 0.128237355810336 0.126907414391918 0.123982679961117 0.127555510829379 0.130270070465740 0.122806893812266 0.125076335727618 0.137169743035363 0.134536026485502 0.125904485799866 5 5|0 -|/ 21580308 21581187 21580986.2 21579973 21585229 - gene protein_coding_gene TRUE TRUE AT5G53170.1 FTSH11 (FtsH protease 11); ATP-dependent peptidase/ ATPase/ metallopeptidase encodes an FtsH protease that is localized to the chloroplast and the mitochondrion similar to FTSH4 (FtsH protease 4), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT2G26140.1); similar to AAA+-type ATPase (ISS) [Ostreococcus tauri] (GB:CAL56292.1); similar to Ftsh-like protease [Pisum sativum] (GB:CAH10348.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.577459153191017 6.39790176890196 6.08314267360391e-05 0.00128469547816012 10.1846507744492 19.3147100463695 0.577459153191017 0.0699816381137566 AT5G09880_at 8.14148525758331 8.2711295659521 9.2251053735468 9.00366810176425 9.6117194931959 8.91087535345978 8.5227020482894 8.19235065017212 8.35393038716631 8.69763177975901 9.53863016316459 9.46224471779018 9.1865494978223 9.101701508715 9.05243269456064 9.569305465484 9.0015255761198 9.1295205972227 8.91732720802371 0.144102136363879 0.14929323763523 0.157515530075202 0.143916571887119 0.142448295392913 0.147910209548314 0.147399302117152 0.151918331618997 0.168960643222555 0.143193225058441 0.145247232073413 0.144511839667882 0.14473342393102 0.152285772715436 0.152308957601367 0.141083694567481 0.168134066351515 0.148858502535398 0.141083694567481 5 0|5 /|- 3081840 3082634 3082261.375 3081443 3085265 - gene protein_coding_gene TRUE TRUE AT5G09880.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G16940.1); similar to RNA-binding re (GB:ABE92730.1); similar to RNA-binding re (GB:ABE81620.1); contains InterPro domain Splicing factor, CC1-like; (InterPro:IPR006509); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.752433759643006 6.3965895328503 6.09385168302862e-05 0.00128633054643818 10.1829159456590 17.6906470984586 0.752433759643006 0.141244484261548 AT5G20350_at 9.05424715580342 9.2680289358315 9.7156672623946 9.8338329677997 9.97136757338212 9.62942106278365 8.82233044924948 9.0082707575348 9.53019044381685 9.2887163768006 9.73489136849043 9.79821200740755 9.87333662309694 9.91339286689401 9.58675337752868 9.9280360747426 9.77460226787148 9.95225755129841 9.3151433254667 0.0869699254869588 0.0820821800417579 0.0915588169548934 0.088527846907974 0.0829432386208267 0.0943204827372953 0.0820821800417579 0.0889465773631223 0.093583672635985 0.0862699474457904 0.0878251419427179 0.0848324924217818 0.0851817510018187 0.0820821800417579 0.084530325009113 0.0846403820721353 0.0892488807852305 0.0820821800417579 0.088035212413847 5 5|0 +|/ 6880227 6881052 6880708.3 6876591 6881272 + gene protein_coding_gene TRUE TRUE AT5G20350.1 TIP1 (TIP GROWTH DEFECTIVE 1) Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. Identical to Palmitoyltransferase TIP1 (EC 2.3.1.-) (Ankyrin repeat-containing S- palmitoyltransferase) (Protein TIP GROWTH DEFECTIVE1) (TIP1) [Arabidopsis Thaliana] (GB:Q52T38); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT2G14250.1); similar to Os06g0644500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058187.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE93297.1); similar to Os02g0184000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046105.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 0.595760721895046 6.39246709193191 6.127626273137e-05 0.00129283048958007 10.1774642514688 19.0119967618612 0.595760721895046 0.0795236546677382 AT5G24840_at 4.75419311132508 5.35271693944204 5.64287680337476 5.97014506053981 5.88369063939804 5.47578533144972 5.16599380895214 5.28233737218380 4.13504510474712 3.91226946211778 5.16631921925429 5.37303180827147 4.77026480935011 4.89462907170823 5.47159712785544 4.76510812278463 5.36198898920637 4.70181988108522 4.48293225542628 0.221680886535809 0.220298961940337 0.226140560518507 0.223027291885993 0.217579030458447 0.230060445060438 0.222954637111607 0.220622341359071 0.236156460856004 0.229833119878195 0.226462137907077 0.220913250153012 0.230695050000748 0.225743334650780 0.217579030458447 0.217579030458447 0.241295208908497 0.217754854816979 0.221917048945166 5 5 - 8533900 8534440 8534159.091 8533790 8535046 - gene protein_coding_gene TRUE TRUE AT5G24840.1 methyltransferase Identical to Probable tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA(m7G46)-methyltransferase) [Arabidopsis Thaliana] (GB:Q8GXB7); similar to methyltransferase [Arabidopsis thaliana] (TAIR:AT5G17660.1); similar to Putative methyltransferase [Medicago truncatula] (GB:ABE93367.1); contains InterPro domain Putative methyltransferase; (InterPro:IPR003358); contains InterPro domain Conserved hypothetical protein 91; (InterPro:IPR004395); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) 0.745330044320282 6.39107771999032 6.13905441974238e-05 0.0012946116631774 10.1756263178533 10.0608892930598 0.745330044320282 0.139011252487705 AT5G48800_at 2.57610906231702 2.67859986342881 3.01491012120586 3.43538834250115 2.98786404056037 3.72439211576963 2.34186693301809 2.28182003375996 2.22183066083726 3.65362391372865 3.7028902409004 4.21945508351843 3.38805834890402 4.17896387588777 3.91025351107296 3.67968314976147 3.65491015686767 3.84627768950594 3.43311863915887 0.220920743118413 0.230087696103720 0.216491239129066 0.217554175000130 0.218316653741848 0.223426899136260 0.220534930483223 0.222679757541517 0.235596607323705 0.219539633707984 0.215693989140032 0.221759617466749 0.231256574857612 0.232450887665077 0.224894761409289 0.218153527530993 0.223800424982818 0.221952412017111 0.225877804756866 5 5 + 19805565 19806155 19805859.545 19803990 19806355 + gene protein_coding_gene TRUE TRUE AT5G48800.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G03010.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91176.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.770371725511179 6.37606549959985 6.26400509137167e-05 0.00132031924231392 10.1557490964076 6.34282843655041 0.770371725511179 0.148200434797221 AT5G39785_at 3.11576850748557 3.9026667779499 4.27772263229591 4.56182398447343 3.96405195690736 3.60587430907454 3.1523299198909 2.75212357473955 2.24208417754073 2.54362236855346 2.76238257960670 3.7531564241322 3.10885462120688 2.87655489748718 2.67494850745198 3.87080110170891 3.07282401911575 3.36493642366508 2.32790751893797 0.166508491057225 0.171058957696961 0.170557970020834 0.169924793474911 0.167641957977470 0.167363550481894 0.171139350739371 0.168665384246173 0.177597465491727 0.169117346681352 0.169460606754354 0.165118576105797 0.168365325966767 0.167779003401064 0.170776558452664 0.165084707336877 0.173356575738351 0.173335865952523 0.173022991157684 5 5|0 +|/ 15946806 15949403 15948006.55 15946416 15949504 + gene protein_coding_gene TRUE TRUE AT5G39785.1|AT5G39785.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69610.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD32213.1); contains InterPro domain Protein of unknown function DUF1666; (InterPro:IPR012870) 0.842999329562059 6.37521282463164 6.27118355610066e-05 0.00132119002047484 10.1546190911922 6.44492621292259 0.842999329562059 0.172046174938908 AT5G07020_at 10.3982281721182 10.3766359517789 10.8310108293875 10.9383965038891 10.8885654017013 10.7121171971891 10.8034099585610 10.8825979905206 11.0163078093366 10.9731033786076 11.7426732660462 11.8674420900423 11.5405837872173 11.6355506575201 11.8532199754987 11.9764467225638 11.6147491360139 11.6406705676958 10.7281132555242 0.0751828246611495 0.0749254672079274 0.0795359060399281 0.0744529421829494 0.0750582495456708 0.0771751504328631 0.0783734882504734 0.073135308567476 0.0785878820072703 0.0793305489096657 0.0733810846616095 0.073135308567476 0.0754332878753595 0.07585809296817 0.0753305921485021 0.073135308567476 0.0819638821358312 0.0768288410733436 0.0764717869017632 5 5|0 -|/ 2180699 2182147 2181149.4 2180503 2182419 - gene protein_coding_gene TRUE TRUE AT5G07020.1 proline-rich family protein similar to unknown protein [Lycopersicon esculentum] (GB:AAU03360.1) 0.527690004482845 6.37377649708851 6.28329561621149e-05 0.00132309883984021 10.1527153577560 22.0487495038837 0.527690004482845 0.038464341373715 AT5G03070_at 4.34557349836074 4.56800706340695 5.42801248626955 5.0720008910428 5.46401875673876 5.4760033874775 5.02693202848912 5.06234949902182 4.32602100047723 4.53295014523595 5.04108222244 5.04289371186541 5.14100099463583 4.99146816489482 5.1274385789928 5.05831488286327 4.96565713570591 5.24114587240135 4.71241567165205 0.216708158275423 0.210634837065572 0.210474745314152 0.215124778334141 0.22413514058875 0.212914866495075 0.209989599606071 0.216384567337202 0.220707566881442 0.216776613584986 0.213176537257819 0.210934230732116 0.220129536068489 0.211479637137741 0.214450888672981 0.212862287569084 0.213952679180347 0.212389919324617 0.215716254324495 5 5 - 718504 719628 718979.273 718203 721538 - gene protein_coding_gene TRUE TRUE AT5G03070.1 binding similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.2); similar to unnamed protein product [Oryza sativa (japonica cultivar-group)] (GB:BAA31220.1); similar to Os01g0158000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042074.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.580811473874504 6.37296078231148 6.2901854338473e-05 0.00132390667119203 10.1516340587811 9.85532260198257 0.580811473874504 0.0729336566568312 AT5G19750_at 6.3268777264999 6.1687855726592 6.85391028648758 6.49057153378165 5.80350024855785 5.76842492539304 5.35277342356608 4.37387127076926 4.47216403396307 3.63980680592371 4.16049591566515 5.88051975995387 4.22462882573941 4.96514231543147 5.36077962704626 4.71002878038049 5.13217989406307 5.06421616134666 3.45986942491826 0.252919109603361 0.255076149913053 0.256213664129552 0.252618073485703 0.26195541501928 0.252405384088345 0.251899690822879 0.255589529715184 0.260479341184544 0.250618744863677 0.253767823148935 0.250618744863677 0.255624737971088 0.265009090281058 0.257714624936603 0.250618744863677 0.264429831776083 0.250618744863677 0.250618744863677 5 0|5 /|+ 6677692 6678335 6678002.625 6677071 6679386 + gene protein_coding_gene TRUE TRUE AT5G19750.1 peroxisomal membrane 22 kDa family protein similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT2G14860.1); similar to Mpv17/PMP22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91342.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) 0.876746785933183 6.37143532380317 6.30309176380797e-05 0.00132548015860805 10.1496116691003 10.2896038725751 0.876746785933183 0.182856462917201 AT5G48520_at 3.67750753460208 4.35292519563529 4.65339384972409 4.14802377744869 5.84684644813453 4.78077804209098 4.7267979808901 4.56298621497407 4.19448200756151 4.01975486738489 5.63847598421949 5.86671333400991 5.89232195628754 6.15559461773593 5.69191791260314 5.60006994210956 5.56619354839954 4.98248294164197 4.04808811306548 0.261504076498035 0.252763166500443 0.261446768274307 0.253301470080232 0.245640050624916 0.279123131579515 0.242557541023111 0.247981696028866 0.257022482316078 0.244156084661205 0.242557541023111 0.242557541023111 0.253031512488426 0.261567465073216 0.256897591190118 0.246989234007013 0.259507372030998 0.247474287329824 0.242557541023111 5 0|5 /|+ 19682675 19683329 19682931.556 19678439 19683662 + gene protein_coding_gene TRUE TRUE AT5G48520.1 similar to Os06g0186500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057010.1); similar to Os07g0185700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059066.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_788829.2); contains domain FAMILY NOT NAMED (PTHR19378); contains domain gb def: Gb|AAB97010.1 (PTHR19378:SF1) 1.05699295738972 6.37135458339567 6.30377566927036e-05 0.00132548015860805 10.1495046171786 9.47448885158573 1.05699295738972 0.236960059374827 AT5G10260_at 1.91280186138263 1.83781692373508 2.23651763184694 2.53640777660401 2.56688540508874 2.18753451310586 2.63670740968102 2.40694243818566 2.52725820227921 2.35072221462982 3.63158375381135 3.89973962292082 3.01290173778576 3.5794026329535 3.76482724962857 3.38454721230788 3.29354462389743 3.53578996066759 2.46497913350585 0.204999609617123 0.198405433819178 0.200617228869663 0.194723188433902 0.194043511733290 0.202791221959549 0.191815471152286 0.194196286448766 0.213340107945358 0.201983016533638 0.202761360750965 0.199918250667566 0.205907437505696 0.194341115197427 0.200965159510178 0.193375347853583 0.200681246562287 0.202172588966664 0.193103089214725 5 5|0 +|/ 3220018 3221173 3220510.375 3219992 3221516 + gene protein_coding_gene TRUE TRUE AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding similar to AtRABH1d (Arabidopsis Rab GTPase homolog H1d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22290.1); similar to 80A08_22 [Brassica rapa subsp. pekinensis] (GB:AAZ67607.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.624204044595137 6.3694987649207 6.31951720532527e-05 0.00132814598884060 10.1470437614485 5.27042438631286 0.624204044595137 0.0935545550716222 AT5G18150_at 6.12247799933892 6.48985068409561 6.50584985976652 6.65697387591391 6.94152355851962 6.73298782466496 5.86493683261722 5.92225647957526 6.06377584181236 6.24888184810676 6.8894312114315 7.01678561253674 6.76098106260456 7.0941359433934 6.52673438604166 6.92498550687647 6.33290018082307 6.72977211723251 6.32462775872741 0.179516656950217 0.168702545572167 0.173387461207386 0.179286726338767 0.176013011161393 0.184862996520181 0.178323487546069 0.174902000371025 0.205246732993917 0.170289503867925 0.169038606119391 0.167911223347797 0.172213305181581 0.175357569668431 0.176962376066013 0.167911223347797 0.183692897116025 0.179924909274149 0.169087296626882 5 5 - 6000048 6000300 6000196.6 6000016 6000333 - gene protein_coding_gene TRUE TRUE AT5G18150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58375.1); similar to hypothetical protein MtrDRAFT_AC156827g5v1 [Medicago truncatula] (GB:ABE86386.1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133:SF1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133) 0.590745275272408 6.3660655107591 6.34875026015841e-05 0.00133364331712016 10.1424898422305 12.9030542570613 0.590745275272408 0.0782723493411452 AT5G03780_at 3.98587160985698 3.58551089308345 4.42662122035174 4.72316158094029 4.37690329355132 4.35789022109629 3.31095622088010 3.72691010925529 3.78714266342553 3.63400107733152 4.73532256385938 4.29599597150560 4.12272085100214 4.11735248623686 3.61427746218166 4.32753283862637 4.5795935839391 4.80133534307185 3.992663997965 0.234068577316744 0.231355389869455 0.249945015409328 0.230882958855772 0.253354013335676 0.236949122457986 0.229713521120536 0.234074503927044 0.234879620273118 0.23835691649941 0.228498901752149 0.235950760264048 0.235340968812807 0.22816625678252 0.229596366380611 0.24531252332087 0.245828098862346 0.241999480955813 0.235469750151880 5 5|0 -|/ 999279 999920 999676.2 999101 1001028 - gene protein_coding_gene TRUE TRUE AT5G03780.1 TRFL10 (TRF-LIKE 10); DNA binding Encodes a protein whose sequence is similar to human telomere proteins. This belongs to TRFL family 2, which do not show DNA binding in vitro. similar to DNA binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G01150.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95463.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.669247839347404 6.3613350315834 6.3892666841975e-05 0.00134100815289579 10.1362123940476 8.12616262719038 0.669247839347404 0.112366196662017 AT5G61560_at 4.41570970267584 5.12439208768661 6.3746850980627 6.44142249810734 6.3801266750712 5.9471136707733 4.82779121182676 4.51849201173727 5.17093067808897 4.84409603688725 5.49884576204613 4.99274741338754 5.34126718224424 5.07469219921193 4.65346656389326 5.7191014595706 4.98602022964397 4.73403123279316 5.34137902414940 0.187165430632243 0.184152813197505 0.186609322623142 0.183432310016551 0.190677089014831 0.196595388407152 0.184281414843886 0.189759055995815 0.199994194405582 0.185126318300929 0.182506654106396 0.182813675798232 0.182200571214191 0.185058478029329 0.187513838062206 0.181984976909069 0.188858409183468 0.186306935350852 0.183963158031946 5 5 + 24773087 24773636 24773298.727 24770094 24773944 + gene protein_coding_gene TRUE TRUE AT5G61560.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61550.1); similar to U-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93477.1); similar to Os10g0561500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065387.1); similar to Os06g0140800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056754.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain U box; (InterPro:IPR003613) 0.785230162164496 6.36125016422877 6.38999609905737e-05 0.00134100815289579 10.1360997428505 10.625628328688 0.785230162164496 0.153799830130081 AT5G47890_at 9.28131108156308 9.56617311388242 9.9584694593233 10.1115471590512 10.3462393833650 9.87541347356937 9.37463252443485 9.62725694233642 9.34778056681447 9.64858379619706 10.5109233863118 10.5089789587736 10.3284229041335 10.3076428451820 10.1145815220747 10.3348640797834 10.0161885558705 10.0355844513045 9.69499993142118 0.136953222363975 0.129447052161897 0.133910940339521 0.129952883909007 0.127877909753283 0.139146400519613 0.128141838092279 0.128914308152155 0.134400477503605 0.128953696140629 0.136929080567524 0.132728470206525 0.127031142091699 0.136267664681166 0.126405310489548 0.134986443574890 0.134740397683491 0.133724275714323 0.128060995700411 5 5|0 +|/ 19406064 19407611 19406904.1 19405963 19407855 + gene protein_coding_gene TRUE TRUE AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative similar to Mitochondrial ribosome [Medicago truncatula] (GB:ABE92961.1); contains InterPro domain Mitochondrial ribosome; (InterPro:IPR007741) 0.658217096529028 6.35988034037388 6.40178177858054e-05 0.00134283153532663 10.1342813184161 19.6843486102274 0.658217096529028 0.108083034665248 AT5G64350_at 11.6041458790294 11.6534250767536 12.2735836543516 12.2666342705288 12.0523753618681 12.0747184524673 11.5658491717794 11.7675733304711 11.1494202777668 11.7199663179563 12.0467161040606 12.0699173070771 11.9696595062907 11.6214430617533 12.0773644394996 12.0473836537894 12.0341571708283 12.0472168067973 11.5116181101604 0.0744365487306364 0.0710464057618898 0.0723396749958924 0.0721137757606465 0.0711838159164556 0.0727274618689105 0.0700789308616718 0.0721768353267555 0.0748701048256695 0.0705889224146717 0.0710892681060569 0.0706271080316288 0.0720083750285226 0.082674764081407 0.0705150712575897 0.0720191526399305 0.0758657194031923 0.0723096344146037 0.0714015540571023 5 5|0 -|/ 25752060 25753183 25752365.444 25751824 25753297 - gene protein_coding_gene TRUE TRUE AT5G64350.1 FKBP12 (FK506-binding protein 12 kD); FK506 binding / peptidyl-prolyl cis-trans isomerase Identical to Peptidyl-prolyl isomerase FKBP12 (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Immunophilin FKBP12) (AtFKBP12) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (FKBP12) [Arabidopsis Thaliana] (GB:Q8LGG0;GB:O04263); similar to immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related [Arabidopsis thaliana] (TAIR:AT4G25340.1); similar to ROF1 (ROTAMASE FKBP 1), FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25230.1); similar to CONSTANS interacting protein 3 [Lycopersicon esculentum] (GB:AAS67371.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) 0.523988462298214 6.35925323759116 6.40718502081761e-05 0.00134331502785431 10.1334487540146 23.6320717287678 0.523988462298214 0.0361632837207123 AT5G18660_at 6.89893986305784 7.39745829292306 6.6285801778564 6.73733051790298 7.68256758754241 7.15706480134608 8.47867730735224 8.3418524428224 7.31289884707392 8.03834448154783 9.88648942917567 10.5366993681118 9.23319962195608 9.75707034637447 10.2578622213007 10.0012400516306 9.16546685845523 10.0125180594391 7.75606225811662 0.219759881293577 0.214235832324501 0.228278973923222 0.231599903279907 0.216476385947637 0.230269506216597 0.212743384462577 0.213334837946322 0.234708232681315 0.230871043666809 0.227392163859472 0.226581707255695 0.216548846270124 0.222768405558899 0.234030905242065 0.224112874693465 0.228763289065612 0.218611729403261 0.223501794528860 5 5 - 6220888 6221411 6221136.091 6220783 6222230 - gene protein_coding_gene TRUE TRUE AT5G18660.1 DVR (PALE-GREEN AND CHLOROPHYLL B REDUCED 2); 3,8-divinyl protochlorophyllide a 8-vinyl reductase Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll. similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT3G18890.1); similar to flavin reductase-related [Arabidopsis thaliana] (TAIR:AT2G34460.1); similar to Os03g0351200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050115.1); similar to Isoflavone reductase [Chlorobium phaeobacteroides BS1] (GB:ZP_00532631.1); contains InterPro domain NmrA-like; (InterPro:IPR008030) 0.713018421799541 6.35687599826003 6.42771226001216e-05 0.00134688265278444 10.1302921137201 16.1946855939179 0.713018421799541 0.128948542881619 AT5G11520_at 9.47847194415567 9.40928181715097 10.0974663877865 10.1190157101844 9.958859192623 9.49008146762042 9.19634737015007 9.11813259144765 9.03134153377666 8.94613794945308 9.49932004282383 9.42260284185187 9.4967405995635 9.50698543857972 9.6800157137254 9.4318740231699 9.24019786817227 9.54998967487294 8.70489199163343 0.105586187924193 0.100510465539409 0.102780864361194 0.100418688300972 0.102746268586710 0.107703913636205 0.101353383374631 0.0983419387523363 0.110749625210975 0.0995186112384282 0.103803287517803 0.101544090868929 0.098199585784023 0.0978827339129651 0.0978827339129651 0.0982899924704215 0.103435379712239 0.102658050167122 0.110862084482827 5 5|0 -|/ 3685260 3686169 3685629.7 3685090 3687765 - gene protein_coding_gene TRUE TRUE AT5G11520.1 ASP3 (ASPARTATE AMINOTRANSFERASE 3) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. Identical to Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) (ASP3) [Arabidopsis Thaliana] (GB:P46644); similar to ASP2 (ASPARTATE AMINOTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT5G19550.1); similar to aspartate aminotransferase P1 (GB:AAA50160.1); similar to aspartate aminotransferase glyoxysomal isozyme AAT1 precursor [Glycine max] (GB:AAC50014.1); similar to aspartate aminotransferase cytosolic isozyme AAT2 [Glycine max] (GB:AAC50015.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.600069604609023 6.3565636709502 6.43041441672303e-05 0.00134688265278444 10.129877324399 18.7947518602895 0.600069604609023 0.0831962440843829 AT5G44520_at 7.96497858271659 8.07683500528266 8.73088190986495 8.38667201775583 9.13212824937767 8.72348530774208 9.07914520925442 8.7356991348197 8.18286769808816 8.10836574789926 9.1840183490052 9.25795736427025 8.86151723385384 9.00557924631172 9.29614901820454 9.27782601055463 9.23585620867469 9.12779561483977 8.0131693396836 0.164744633664074 0.160962905867815 0.159497152427671 0.171927204116369 0.155926857425482 0.165976047408053 0.153227808257622 0.160162600924502 0.170504547133778 0.183660105947694 0.159206035278327 0.153648457265175 0.158442900916274 0.154655067019969 0.165616735090846 0.155129718058268 0.164710629927800 0.157977300579242 0.17344257854173 5 5|0 -|/ 17951852 17952740 17952263.571 17951514 17953754 - gene protein_coding_gene TRUE TRUE AT5G44520.1 ribose 5-phosphate isomerase-related similar to ribose 5-phosphate isomerase-related [Arabidopsis thaliana] (TAIR:AT3G04790.1); similar to Os03g0781400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051457.1); similar to ribose 5-phosphate isomerase-like [Saussurea involucrata] (GB:ABC68263.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788) 0.666748586828727 6.35602941869738 6.43503942334801e-05 0.00134720056216412 10.1291677718590 17.2323806650707 0.666748586828727 0.111608394414061 AT5G09250_at 4.81103801376111 4.9537114709451 5.1213830870537 4.93706563617903 5.43052215507824 5.51150328191657 4.2219070931602 4.82216575300714 5.52565030783167 4.98903879530707 6.20791857971163 6.26115844847411 5.60792658605844 6.69220337717484 5.8023984593269 5.99243003110468 5.08263963610729 5.47501768423397 4.79112618738796 0.212790024671086 0.213401820291000 0.227666491561134 0.220238777239451 0.218257992360749 0.213899850131772 0.212790024671086 0.216176338652483 0.223361995611432 0.212790024671086 0.212790024671086 0.213481406100596 0.212790024671086 0.217882633166269 0.218705979352952 0.213809673718094 0.243822488101004 0.212790024671086 0.214430771628009 5 5|0 -|/ 2875444 2876300 2876003.444 2875233 2876576 - gene protein_coding_gene TRUE TRUE AT5G09250.1 KIWI; DNA binding / transcription coactivator putative transcriptional co-activator (KIWI) mRNA, complete Identical to RNA polymerase II transcriptional coactivator KIWI (KIWI) [Arabidopsis Thaliana] (GB:O65154); similar to transcriptional coactivator p15 (PC4) family protein [Arabidopsis thaliana] (TAIR:AT5G09240.1); similar to Os02g0553600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047113.1); similar to p31A, putative [Aedes aegypti] (GB:EAT39474.1); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173) 0.66809306371846 6.35168089346895 6.47281749433045e-05 0.00135445553803722 10.1233908173737 10.4722370766124 0.66809306371846 0.112311948809520 AT5G12220_at 2.98980453681947 3.50999166616100 3.80546003155953 3.90623728862409 3.89812617516455 3.94644214052573 3.09801306732325 2.8471846428022 2.19683575179789 2.42321192355739 3.14629917673909 3.0169294060249 2.53179871143193 2.78515742506067 3.13545954291325 2.89039646875291 3.24173167942911 2.41007294205057 2.54820841094193 0.242952833649560 0.243409584180307 0.244323028200853 0.241133622530287 0.237108222655899 0.242794467268696 0.240816093739225 0.240745882381174 0.239013259357735 0.237910139121484 0.237422126115524 0.237084166297325 0.244221639926195 0.243389028611970 0.240944540324105 0.238469702282563 0.246505386462736 0.243923031823711 0.236500519511741 5 5 + 3952422 3952982 3952620.909 3950156 3953086 + gene protein_coding_gene TRUE TRUE AT5G12220.1 las1-like family protein similar to Las1-like [Medicago truncatula] (GB:ABE77696.1); contains InterPro domain Las1-like; (InterPro:IPR007174) 0.64156495215495 6.34862640181861 6.49949580232612e-05 0.00135891872423363 10.1193312858673 6.14223212586383 0.64156495215495 0.101793812428365 AT5G54510_at 6.61931472343887 6.85868235576214 5.94252337468952 6.50199227958885 6.37869156399397 6.70877247817239 6.96321847813162 7.51769702441707 5.17579558339303 5.64302210948948 9.23048018874896 8.7963461963739 7.70099123156922 7.63628571837133 8.26682434215677 7.71021080376014 7.43830048156505 9.2626927155396 7.43057579011721 0.235303003558508 0.211621881743965 0.220037907990045 0.212400237222182 0.209474462687454 0.224338135296063 0.214856637329664 0.208015387228435 0.249562128980333 0.220110495361065 0.216578296266831 0.218382459347435 0.215821822527887 0.214100340418019 0.208937713611045 0.208372646157922 0.216645495631574 0.220098793682307 0.219162299044316 5 0|5 /|- 22148558 22149091 22148880.6 22148319 22150904 - gene protein_coding_gene TRUE TRUE AT5G54510.1 DFL1 (DWARF IN LIGHT 1); indole-3-acetic acid amido synthetase Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). Identical to Indole-3-acetic acid-amido synthetase GH3.6 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 6) (AtGH3-6) (DWARF IN LIGHT 1 protein) (DFL-1) (GH3.6) [Arabidopsis Thaliana] (GB:Q9LSQ4;GB:Q8VYV6); similar to GH3.1 [Arabidopsis thaliana] (TAIR:AT2G14960.1); similar to YDK1 (AUXIN UPREGULATED1, YADOKARI 1), indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT4G37390.1); similar to GH3.5/WES1, indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT4G27260.1); similar to auxin and ethylene responsive GH3-like protein [Capsicum chinense] (GB:AAS02074.1); similar to Nt-gh3 deduced protein [Nicotiana tabacum] (GB:AAD32141.1); similar to auxin-induced GH3 protein [Pinus pinaster] (GB:CAJ14972.1); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 0.782701038717239 6.34819157879638 6.50330318205173e-05 0.00135891872423363 10.1187532772073 13.8555603451546 0.782701038717239 0.153492969031882 AT5G51350_at 4.63280291502251 4.57605808710217 3.76330733738341 4.20123137077001 4.3386383151418 5.00233324490847 3.13018149216761 3.31874019874645 3.05431555485326 3.53033467127038 4.54666710793487 5.00681798851978 4.19229175847829 4.26749063408142 4.59281233069607 4.04548650844868 3.73895899488516 4.692649751043 3.31796466300739 0.192472560551905 0.195751758109294 0.198042039098281 0.195549964946951 0.192766188019411 0.205128720016982 0.195295701086886 0.200926319774372 0.194489667122754 0.200533424133016 0.195249688137373 0.198427907736665 0.199015825248587 0.192197346611320 0.192594625945571 0.195405985808777 0.192152218257028 0.196621951869737 0.199546136939029 5 5 - 20885111 20885684 20885376.636 20884828 20887971 - gene protein_coding_gene TRUE TRUE AT5G51350.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G61480.1); similar to Protein kinase; Actin-binding, actinin-type [Medicago truncatula] (GB:ABE92015.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.7482285741709 6.34816347227819 6.50354936952462e-05 0.00135891872423363 10.1187159143467 7.96354587714093 0.7482285741709 0.141761536600519 AT5G11300_at 2.14777704262819 1.96655506616292 2.85420080920317 2.51467288233601 2.33695770185321 2.37246008826422 2.01617904985957 1.61136358451035 2.28992843616757 2.73153338949713 3.19355430201807 3.22494489585024 3.18671855602614 2.92404140928117 3.0742370214059 2.73199536979804 2.9867957166424 3.33554975785147 2.19999371697928 0.213688815565320 0.209869235336493 0.213921183296655 0.218310377810400 0.212090410025894 0.209067775722504 0.209393448864512 0.216754865629138 0.217291568888594 0.217225859506700 0.212960078311550 0.211911402030472 0.213701843559567 0.209384252744882 0.211726481127525 0.214349229821113 0.213635755533597 0.212907113452838 0.217150546056071 5 5|0 -|/ 3601838 3603002 3602317.8 3601518 3605260 - gene protein_coding_gene TRUE TRUE AT5G11300.1 CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS); cyclin-dependent protein kinase regulator mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ). similar to CYCA2,1 (CYCLIN A2,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G25380.1); similar to cyclin 2 (GB:AAA90945.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.62959098284254 6.34638977147547 6.51910561350297e-05 0.00136151305552636 10.1163578413687 4.97221151618079 0.62959098284254 0.0968575371423204 AT5G48580_at 8.05569113626969 8.31239524176712 8.62238393078008 8.53343214007113 8.57649461879178 8.53093228375064 8.16185340367692 8.23763724606657 8.5587298507331 8.09440085863159 9.09254543231248 9.31841899537955 8.92930161266357 9.01754526014436 9.29528637481429 8.7954198253331 8.35644525890948 9.03103162558983 8.17466876255737 0.146592341900014 0.145354854644125 0.143157909803527 0.145189139640594 0.142322369934294 0.152200499115432 0.139292373185704 0.149170259321259 0.153404267781581 0.146267700496621 0.146041001926129 0.139577337870330 0.151086754544621 0.146313037713821 0.149592872011246 0.138918601868388 0.144766747273155 0.141328337888295 0.149928321439010 5 5|0 -|/ 19713455 19714498 19713831.111 19713155 19714551 - gene protein_coding_gene TRUE TRUE AT5G48580.1 FKBP15-2 (FK506-binding protein 15 kD-2); FK506 binding / peptidyl-prolyl cis-trans isomerase immunophilin (FKBP15-2) Identical to FK506-binding protein 2-2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-2) (FKBP15-2) [Arabidopsis Thaliana] (GB:Q38936;GB:Q9FJL2); similar to FKBP15-1 (FK506-binding protein 15 kD-1), FK506 binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25220.1); similar to immunophilin (GB:AAC49391.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) 0.538741313619654 6.34069515260269 6.56932068297587e-05 0.00137127882887542 10.1087838795983 17.0065687278721 0.538741313619654 0.0494429428077419 AT5G04770_at 4.43755921987359 5.67851353311183 5.64561950238798 6.27467028522143 6.05895554989744 6.62654144979193 4.11325605654864 4.72132023123627 3.4812690906435 3.60685646007486 3.87495113095143 4.55774469817057 4.75282557139977 4.79776630265464 3.8408386608354 4.91627544889634 5.56303835553564 4.32362745152081 3.66604992669877 0.240905740127428 0.241842683671225 0.236521862805354 0.240403432518610 0.242470407120814 0.245064383825315 0.241497546241168 0.241671921136090 0.234911646573134 0.241015286080971 0.240396481394432 0.239659131800306 0.244866861300583 0.254083579919691 0.240730778640548 0.234911646573134 0.237235747023421 0.234911646573134 0.234911646573134 5 5|0 +|/ 1380513 1382219 1381904.5 1379069 1382420 + gene protein_coding_gene TRUE TRUE AT5G04770.1 ATCAT6/CAT6 (CATIONIC AMINO ACID TRANSPORTER 6); amino acid transporter/ cationic amino acid transporter Transporter for essential amino acids, with preference for large, neutral and cationic amino acids. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. similar to CAT7 (CATIONIC AMINO ACID TRANSPORTER 7), cationic amino acid transporter [Arabidopsis thaliana] (TAIR:AT3G10600.1); similar to Amino acid permease family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96501.1); similar to Os11g0155500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065789.1); similar to amino acid transporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92723.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) 1.20372136499432 6.34037106533589 6.57219093187267e-05 0.00137127882887542 10.1083526915549 9.52610878432595 1.20372136499432 0.280517728783232 AT5G21160_at 6.65803562467644 7.00414473062784 7.20912780195564 7.72287193260796 7.44863809016373 7.88923028323895 4.97360719553612 6.33387771559096 5.70047376351441 5.56596713111749 6.7378534800279 7.00342018955572 6.61412599958855 6.62930908368603 7.39968399093702 6.76490961219092 6.09520506065649 6.74801239703369 5.96573863113517 0.211316081775627 0.211927884838598 0.208615228584824 0.213669907686917 0.216995407289240 0.226464420499595 0.208615228584824 0.211435340959233 0.221544280436054 0.223622492839750 0.209594313389461 0.214364381577255 0.208615228584824 0.212671377947818 0.208615228584824 0.208615228584824 0.218068923500976 0.217536217225752 0.215861637037938 5 5 - 7199286 7200389 7199984.182 7198744 7204093 - gene protein_coding_gene TRUE TRUE AT5G21160.1 La domain-containing protein / proline-rich family protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G35890.1); similar to la related protein -like [Oryza sativa (japonica cultivar-group)] (GB:BAD81188.1); similar to Os01g0266000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042674.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630) 1.16502792258546 6.33825036071339 6.59100599183621e-05 0.00137454309186030 10.1055307738334 13.1515040811157 1.16502792258546 0.269664587204091 AT5G58300_at 5.26507189943104 4.79105927180834 4.71120829151696 4.6811482728333 4.80329518020368 4.7263807896903 4.31732289558415 4.44495563542007 4.24807745005316 4.293942403467 5.63781287244811 6.57567400188764 4.73837159131306 5.68474542727944 6.36973776000527 5.27681496322417 4.93542573262885 5.26542417736005 4.59141670848761 0.223590214461784 0.219118373610213 0.218758792463537 0.223390948312428 0.218047875518215 0.224889287240610 0.218047875518215 0.222158635398181 0.220728980264792 0.226678207634055 0.218343907282356 0.226374653338512 0.218619841801805 0.221924470288743 0.244402766307377 0.225031041680717 0.222078002910159 0.220975653320080 0.218985922329165 5 5 + 23591535 23592063 23591827.545 23589105 23592310 + gene protein_coding_gene TRUE TRUE AT5G58300.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08680.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G05160.1); similar to Os01g0819100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044637.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB62593.1); similar to Os05g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055854.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.604297168216278 6.33459817733532 6.62354403009667e-05 0.00138066474400394 10.1006694221353 9.6867117811131 0.604297168216278 0.08614533851491 AT5G16250_at 1.94322124520652 2.58075374398574 2.17252634523311 2.50836273885779 2.22842205645640 2.72453158383740 2.37796108010004 2.70850385431266 2.67444238136204 2.93486277644145 3.87671112534364 4.74894435378883 4.45839990123016 4.41914870616132 5.19432335211732 4.16380265961881 4.49037537438916 4.40522595781665 2.98563115843863 0.235305607199887 0.225803276078268 0.237688784377259 0.2266624230707 0.223756742098836 0.224779080531975 0.232286870733719 0.227621485559577 0.224396869437394 0.2328794363829 0.223756742098836 0.228163442496504 0.223756742098836 0.231853977680114 0.245908587690539 0.223756742098836 0.233939594472575 0.230341361104165 0.22795901657117 5 5 - 5310275 5310764 5310540.273 5310098 5310954 - gene protein_coding_gene TRUE TRUE AT5G16250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02640.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78001.1) 0.805244178461232 6.32717820075255 6.69018198069017e-05 0.00139388515682927 10.0907867121619 6.07283293144318 0.805244178461232 0.161842379505897 AT5G67100_at 2.12025079926916 2.16364342557160 2.69599288757165 2.73091449518652 1.86676710414451 2.19275028560474 2.36301499449803 2.61034578515553 2.2218600832322 2.47131575758563 3.33464503668894 4.11254552536473 2.77778143587768 3.74282516172142 3.74808990005605 3.10679057631016 3.06959871971145 3.57856731664944 2.34133047817703 0.204090030984401 0.200212914293809 0.201447117425060 0.200536726998478 0.202164614446390 0.200924825506154 0.203418430260681 0.200212914293809 0.21049045228676 0.210037885586778 0.210011387435199 0.207783398210074 0.205496583782600 0.201185969126824 0.200212914293809 0.211283309589208 0.203179697396791 0.206322089247852 0.204453400220447 5 5|0 +|/ 26801162 26802281 26801836.3 26794220 26802330 + gene protein_coding_gene TRUE TRUE AT5G67100.1 DNA-directed DNA polymerase alpha catalytic subunit, putative Identical to DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (POLA) [Arabidopsis Thaliana] (GB:Q9FHA3); similar to DNA-directed DNA polymerase delta catalytic subunit, putative (POLD1) [Arabidopsis thaliana] (TAIR:AT5G63960.1); similar to DNA polymerase alpha catalytic subunit [Oryza sativa] (GB:BAA24573.1); similar to DNA polymerase alpha catalytic subunit (GB:O48653); similar to putative DNA polymerase alpha catalytic subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD81999.1); contains InterPro domain DNA-directed DNA polymerase B; (InterPro:IPR006172); contains InterPro domain DNA polymerase B, exonuclease; (InterPro:IPR006133); contains InterPro domain DNA polymerase (pol2); (InterPro:IPR004578); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain DNA polymerase B region; (InterPro:IPR006134) 0.573156230692903 6.31952644369773 6.75965536631865e-05 0.00140751671228306 10.0805866969873 5.23230542148143 0.573156230692903 0.071465498722273 AT5G07730_at 3.22438731863449 3.10252154212921 3.41741945624475 3.48146507184356 3.81843474992393 3.92818589292648 2.6405587029286 2.77578230751238 3.96603977169228 2.85480622491680 3.96560073438062 3.54164817823923 3.42552680013364 3.7464972966837 3.6096088358302 3.54735752843832 3.19638392724533 4.03995115992374 3.11931030646612 0.202090064457528 0.205309432061128 0.218238348007684 0.207977263907765 0.202500861661447 0.208366914935151 0.202579359143502 0.205677655769446 0.206555121652438 0.210546627766014 0.209286610084801 0.205793732000290 0.207262496054643 0.215002367325014 0.205627582706535 0.202090064457528 0.204441772784953 0.206779812636997 0.202090064457528 5 5 - 2457566 2458150 2457885.545 2457348 2458431 - gene protein_coding_gene TRUE TRUE AT5G07730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61360.1) 0.523125099092227 6.31925856321044 6.7621015383539e-05 0.00140751671228306 10.0802294463126 6.7723230012518 0.523125099092227 0.0384180749479119 AT5G41010_at 7.72106378775162 7.89946426936504 8.64150931755142 8.57303660432714 8.8358826016995 8.11853829222256 7.89129974293998 7.78588877348004 7.25701621389475 7.34528389147574 8.12980183626458 8.24972466216375 8.10935510099242 8.12907452043417 8.13768761650869 8.17150353899066 8.18407078063566 7.47995474277307 7.5072368268143 0.125694078777711 0.123350275738792 0.132780568789201 0.123615924305631 0.124782071878638 0.123626584398682 0.128802927049615 0.126190125539629 0.137308237399128 0.122539385508115 0.125889476525077 0.131362410043614 0.124084392125528 0.123279003859241 0.124222915539014 0.121585327967662 0.130180561441204 0.137620846525258 0.130877890558333 5 0|5 /|+ 16441712 16441752 16441732.833 16441278 16442180 + gene protein_coding_gene TRUE TRUE AT5G41010.1 DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative similar to DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative [Arabidopsis thaliana] (TAIR:AT1G53690.1); similar to polymerase (RNA) II (DNA directed) polypeptide K isoform a [Mus musculus] (GB:NP_001034457.1); similar to unnamed protein product [Mus musculus] (GB:BAB31480.1); similar to metallothionein-I gene transcription activator [Mus sp.] (GB:AAB27565.2); contains InterPro domain RNA polymerase Rbp10; (InterPro:IPR006591) 0.71093175817488 6.31843670650101 6.76961231548333e-05 0.00140840392212421 10.0791333352882 15.9052065456206 0.71093175817488 0.12975748727848 AT5G63040_at 4.43535220249153 4.99228204651334 5.67028074970812 5.89435430929877 6.02261815600139 5.20297355670674 6.4976560386493 6.1483869395163 4.02401846204810 5.39581669751412 6.59837731782823 6.36310878859813 6.22058317389375 6.52649930026695 6.01354561685372 7.09707995722587 6.48446062326828 6.06720831894535 5.10838130503833 0.244920874623504 0.236197032141185 0.240384080477583 0.247425708672299 0.243809107622188 0.259974019240344 0.241100119315401 0.234600862384776 0.284539037501807 0.246971779772072 0.236563465875861 0.241665891591579 0.241124063584605 0.25255307544287 0.254951130987205 0.239642279192729 0.241635154444786 0.258590063433141 0.245639276375329 5 0|5 /|+ 25306953 25307515 25307203.222 25305372 25307638 + gene protein_coding_gene TRUE TRUE AT5G63040.1|AT5G63040.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48460.1); similar to hypothetical protein MtrDRAFT_AC124952g33v1 [Medicago truncatula] (GB:ABE93586.1) 0.878878225856327 6.31613895392384 6.79065851755102e-05 0.00141210494764290 10.0760682860400 11.2400363541825 0.878878225856327 0.185917900342116 AT5G65940_at 8.08734249511914 8.16375890679775 8.88245121759505 8.7674614833358 9.05785648134975 8.67960995674143 8.15864535546412 8.18122807793596 7.84924028629409 8.53122678620331 8.93625823894391 8.8838677550069 8.7718180551675 8.83897394717355 8.7753194321847 8.9159322274662 8.62702345598818 8.45552146367788 8.62591047725481 0.151632358396112 0.148712395362307 0.14931082996884 0.151331211157789 0.154186186696241 0.150111670287829 0.151782744286339 0.15094589032899 0.160498911948968 0.151496355050570 0.148774176521776 0.147612035189130 0.157120585268772 0.148960552453057 0.143284699486310 0.148102778317401 0.162841822341309 0.151540047727996 0.150623293945275 5 5|0 -|/ 26394063 26395093 26394572.3 26393836 26396461 - gene protein_coding_gene TRUE TRUE AT5G65940.1|AT5G65940.2|AT5G65940.3 CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase|CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1) hydrolyzes beta-hydroxyisobutyryl-CoA similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative [Arabidopsis thaliana] (TAIR:AT2G30660.1); similar to Os12g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066529.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96998.2); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753)|similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative [Arabidopsis thaliana] (TAIR:AT2G30660.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97000.2); similar to Os12g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066529.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96998.2); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753) 0.569615607313316 6.31490238611893 6.80201386494597e-05 0.001413788195373 10.0744184607836 17.0528184993933 0.569615607313316 0.0697911500562468 AT5G54880_at 2.63279353853563 2.88892450261264 3.48936318054352 3.70525108378883 4.04572973422372 3.63463103720298 3.18395878440097 3.17716719196989 2.74422741382882 3.38087384291865 3.84167408445886 3.86222768040448 3.51692693285519 3.43536295599323 3.83859450633785 3.67365765805027 3.17815132807101 3.26552001460512 3.16090850613186 0.207253414582816 0.212277470704350 0.211297068444851 0.208358791021083 0.210979828748741 0.216903595475344 0.209651602615886 0.221722588258908 0.214323388233833 0.216802534763317 0.209141429032201 0.209753003347254 0.21252235896255 0.207164519691999 0.216309364998106 0.209702246822102 0.224591348352325 0.213997565672014 0.209902916170605 5 5 + 22309789 22310162 22309958.182 22309112 22310526 + gene protein_coding_gene TRUE TRUE AT5G54880.1 DTW domain-containing protein similar to Os03g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050511.1); similar to DTW domain containing protein [Pseudomonas mendocina ymp] (GB:ZP_01526409.1); contains InterPro domain DTW; (InterPro:IPR005636) 0.614605281015271 6.31260258520842 6.8231870345715e-05 0.00141750947160701 10.0713494662423 6.6806528730215 0.614605281015271 0.0917775503933968 AT5G53360_at 5.55759133424867 5.72779554869601 6.73635939480721 6.49944316996537 7.88368550192408 6.3718860290987 5.31394616753264 4.82542164243535 5.14643634520196 4.75165499052494 6.23434279155531 5.80176110927563 6.08901421274545 6.0315763125318 4.95900512826542 6.29535579032684 5.52086159261676 5.57396308159998 4.93748651502545 0.276656967646687 0.277482677276301 0.279020844965181 0.267607380238194 0.274528886100424 0.285418071312247 0.267416377287308 0.267416377287308 0.268664431866492 0.278146700911886 0.273417046247809 0.272093833871515 0.270412833316460 0.267416377287308 0.269363743768851 0.267416377287308 0.301097905730168 0.272037332233201 0.267416377287308 5 5 + 21665871 21666457 21666131.818 21665128 21666793 + gene protein_coding_gene TRUE TRUE AT5G53360.1 seven in absentia (SINA) family protein Identical to E3 ubiquitin-protein ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5) (SINAT5) [Arabidopsis Thaliana] (GB:Q8S3N1;GB:Q8GYS3;GB:Q9FK06); similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT4G27880.1); similar to E3 ubiquitin-protein ligase SINAT5 (Seven in absentia homolog 5) (GB:Q8S3N1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 1.19234861808394 6.2985720728591 6.95390006138457e-05 0.00144397306731864 10.0526091965013 11.4937299082295 1.19234861808394 0.279540476922684 AT5G19370_at 9.60763679371414 9.58136697136715 10.1942158977399 10.2063091950255 10.0455842781857 9.84044414281064 9.81340031608 9.77261706888104 9.91534699816176 9.94160618666369 10.4827012148824 10.6020731913630 10.3486490544702 10.5345326288681 10.7912828011807 10.7137422900634 10.3551247380486 10.5238655734963 9.79568916013296 0.0822166363050387 0.074640741932269 0.0775764583014604 0.0757545931601194 0.077173291099283 0.082450917639072 0.0753747429258504 0.077236027548674 0.0801352674445223 0.0778089206139378 0.0744120526026773 0.0744120526026773 0.0744120526026773 0.0820816225204013 0.0762247342632625 0.0744120526026773 0.079355329540702 0.0757402692309867 0.078849196562881 5 5|0 -|/ 6524249 6526083 6525020.1 6524122 6526689 - gene protein_coding_gene TRUE TRUE AT5G19370.1 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.2); similar to PpiC-type peptidyl-prolyl cis-trans isomerase; Rhodanese-like [Medicago truncatula] (GB:ABE77684.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain PpiC-type peptidyl-prolyl cis-trans isomerase; (InterPro:IPR000297) 0.51883270624516 6.2918912536293 7.01708242404568e-05 0.00145639533868761 10.0436754308425 20.0968021087419 0.51883270624516 0.0365395814099055 AT5G55960_at 7.0473772632205 7.84134870907007 8.41729067722135 8.82822146317592 9.31703663535663 8.81296395953956 8.89455933813263 9.08543332442862 7.90961706048371 8.32503720937775 9.39771792853012 9.46879635388464 9.50057177492315 9.2064741865171 8.85349828764963 9.384859167261 8.82298678828061 9.43012270010681 8.26896890241894 0.241314802932328 0.209474287523542 0.207755590781581 0.210412617286982 0.209101787948592 0.208253728718788 0.211621315464296 0.212836711751033 0.237932748990328 0.205550958564893 0.214807093107233 0.208436130157919 0.202155577625406 0.213351214289838 0.214497276527574 0.207660138406090 0.222327185658357 0.221715507999311 0.200696235383156 5 5|0 +|/ 22681304 22681768 22681574.3 22679802 22682313 + gene protein_coding_gene TRUE TRUE AT5G55960.1 similar to Unknown protein [Medicago truncatula] (GB:ABE89316.1); similar to Os06g0297700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057438.1); contains domain TRANSMEMBRANE PROTEIN (PTHR21716) 0.858476266372206 6.28908342667057 7.04382032522565e-05 0.00146124529451162 10.0399187410894 17.2435303158453 0.858476266372206 0.180655882967001 AT5G61540_at 4.0086986179447 3.92293227545796 4.47366267250755 3.95477704184653 4.72690348316679 4.2612834064973 3.89220650843124 3.45364364053442 4.06130507390665 3.43591785624848 4.8408211630081 5.15997175792397 4.65447077716438 4.89822799056279 4.47370609947669 4.88619446940227 4.66368921616028 4.24209718168711 3.81647217828469 0.204967961452098 0.201760415542523 0.199583980110969 0.199577979376574 0.199636687813245 0.201590698893757 0.200771660281971 0.202952394833474 0.198716754111357 0.202270534376477 0.20733856867091 0.199141586293451 0.205480252458980 0.201763599053773 0.206351437430732 0.204368447824015 0.211405455994821 0.202290901229442 0.200876839711273 5 5|0 +|/ 24763307 24764342 24763818.5 24762173 24764750 + gene protein_coding_gene TRUE TRUE AT5G61540.1|AT5G61540.2|AT5G61540.3 L-asparaginase, putative / L-asparagine amidohydrolase, putative|asparaginase Identical to Probable L-asparaginase 3 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 3) [Contains: L-asparaginase 3 subunit alpha; L- asparaginase 3 subunit beta] [Arabidopsis Thaliana] (GB:Q56W64;GB:Q5M760;GB:Q9FKG7); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to OSIGBa0134H18.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67499.1); similar to ENSANGP00000016583 [Anopheles gambiae str. PEST] (GB:XP_320240.3); similar to Os04g0549300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053482.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246)|Identical to Probable L-asparaginase 3 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 3) [Contains: L-asparaginase 3 subunit alpha; L- asparaginase 3 subunit beta] [Arabidopsis Thaliana] (GB:Q56W64;GB:Q5M760;GB:Q9FKG7); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to hypothetical protein FG02189.1 [Gibberella zeae PH-1] (GB:XP_382365.1); similar to OSIGBa0134H18.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67499.1); similar to Os04g0549300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053482.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) 0.745476009761194 6.28727505278391 7.0610986344955e-05 0.00146412915120181 10.0374986307229 8.33607797316655 0.745476009761194 0.143305313030420 AT5G42810_at 7.06152086243686 6.95080997447241 8.2683726127374 8.2382613598512 8.75048366998083 8.0862451072286 8.33553614594789 8.21164162040744 7.52674679518876 8.05660290138548 8.65702561743 8.14596642689527 8.54338663214142 8.38770575147562 8.1737028798042 8.61272401241896 8.83159273291739 8.57968979946253 7.91402930032987 0.164279443711567 0.154527569390186 0.158899614610306 0.16367558908578 0.155151331053627 0.155495551673732 0.156789789973958 0.153111984464262 0.164222157769593 0.153098107045752 0.155606457015623 0.153272827141459 0.155210558787566 0.151598473947149 0.167111482910380 0.150529557982109 0.153878961381484 0.152895601693124 0.152523193863959 5 5 + 17185753 17186156 17185953.909 17184046 17186687 + gene protein_coding_gene TRUE TRUE AT5G42810.1 ATIPK1 (Inositol-pentakisphosphate 2-kinase 1); inositol pentakisphosphate 2-kinase Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. Identical to Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (AtIPK1) (IPK1) [Arabidopsis Thaliana] (GB:Q93YN9;GB:Q9FMY6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22100.1); similar to Os04g0661200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054147.1); similar to H0112G12.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67064.1); contains InterPro domain Protein of unknown function DUF941; (InterPro:IPR009286) 0.677489051283417 6.28679817835502 7.06566255370292e-05 0.00146437516364842 10.0368603578330 16.1498258677343 0.677489051283417 0.118605751914193 AT5G58210_at 3.10138585465782 3.12913010391116 4.0219678540704 4.05999390704163 4.03033251908984 3.68341932392809 3.17659699906129 3.39335730316970 3.00238794652644 3.38813035311978 3.66270406699195 3.42961776886993 3.77834379426448 3.39976989454320 3.66045585659986 3.87999701042980 3.55891694694108 2.93234051565471 3.05258157965046 0.201389610225753 0.193531557750917 0.201488971526679 0.200944949079626 0.206938998829513 0.205244781628571 0.199880111256533 0.195375095633174 0.204953958572696 0.207023177637885 0.206915353854370 0.199834309829162 0.194492486143251 0.198634695507368 0.196478150417991 0.199275066512284 0.200323103826778 0.205475169716430 0.199172163322969 5 5|0 +|/ 23570442 23571206 23570809.556 23569320 23571628 + gene protein_coding_gene TRUE TRUE AT5G58210.1|AT5G58210.2|AT5G58210.3|AT5G58210.4 hydroxyproline-rich glycoprotein family protein similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G52170.1); similar to hypothetical protein MtrDRAFT_AC138580g22v1 [Medicago truncatula] (GB:ABE81148.1) 0.569439553926909 6.28283093898571 7.10375381289539e-05 0.00147156624105859 10.0315490859278 6.91725707889246 0.569439553926909 0.0712576652051094 AT5G46210_at 10.0007844836561 10.0577138320074 10.5871118854045 10.5397766818924 10.8018225539232 10.4881111016929 10.0525573562235 9.96110649980043 9.8093283127176 10.1085485645916 10.5107136067128 10.6163441455786 10.5126772505476 10.4601142688517 10.4164992722107 10.5554557472595 10.4148010837816 10.4408871031553 10.0349595093052 0.0934470894043185 0.0873543036195058 0.0933878971566792 0.0916362781032825 0.0892771852068257 0.0950544585713605 0.089474679771742 0.0901126364832107 0.0977810770825837 0.0924161791197069 0.0885655491290842 0.0900804786794329 0.0909231315825275 0.0897107269755106 0.0920789270856016 0.0873543036195058 0.0918801267382738 0.0923432868729727 0.092316120230417 5 5|0 -|/ 18748883 18749936 18749434.75 18748645 18754037 - gene protein_coding_gene TRUE TRUE AT5G46210.1 CUL4 (CULLIN4); protein binding / ubiquitin-protein ligase Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. similar to ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G26830.1); similar to putative cullin protein [Oryza sativa (japonica cultivar-group)] (GB:AAT75245.1); similar to Cullin-4B, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99238.1); similar to putative cullin protein [Olea europaea] (GB:AAL27655.2); contains InterPro domain Cullin; (InterPro:IPR001373) 0.546411388515240 6.28185453127739 7.11316247502773e-05 0.00147281159225957 10.0302415272335 20.5487307269752 0.546411388515240 0.0579822760692304 AT5G11240_at 2.78094563707415 3.35671085540781 4.02947469570262 4.51111742016983 3.4769945960225 3.40120581949376 2.94229830161236 3.61837308907223 1.91989856633732 2.1124010271212 2.9852930129352 3.81211855859920 3.0750537930261 3.30214747169833 2.95745861086908 3.48577508567743 3.41390181747405 2.63812517303238 2.59088243538481 0.218853847143918 0.213061878404422 0.217575688154227 0.229500479081002 0.217965892109669 0.207077668932544 0.209296376212807 0.212403428582464 0.210644616384598 0.214751913044706 0.209125861491092 0.213045665798313 0.220625478927848 0.209970554713068 0.21773077890236 0.212575482920076 0.214793659358738 0.222443492161595 0.212898548218714 5 5|0 +|/ 3585732 3586547 3586203.4 3582541 3586987 + gene protein_coding_gene TRUE TRUE AT5G11240.1 transducin family protein / WD-40 repeat family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15420.1); similar to Unknown (protein for IMAGE:8332239) [Xenopus laevis] (GB:AAI25999.1); similar to LOC398447 protein [Xenopus laevis] (GB:AAH79723.1); similar to Os03g0300300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049856.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Protein of unknown function NUC189, C-terminal; (InterPro:IPR012979) 0.840561504760868 6.28013025958288 7.12981020461448e-05 0.00147555391989719 10.0279321165608 6.22287081850028 0.840561504760868 0.175316106706504 AT5G55930_at 7.59421955940441 7.89987873872871 4.93302236181166 4.57790792578036 5.93413079929495 6.40172397978567 1.34073286334152 1.51026176612772 3.80136858668281 1.66042684333811 3.25588566094329 3.64447601432438 2.01135266731477 3.48464202638408 2.52637396104265 4.07714989509937 1.89154858588289 2.02174949477859 1.70637714728420 0.305808750485018 0.306906410072053 0.294991761255408 0.291463502673871 0.293498085230006 0.302428331361940 0.289493708056428 0.300434896749569 0.296362835890148 0.299528358095797 0.289493708056428 0.289493708056428 0.294999738387174 0.294984809330607 0.300400649478831 0.292747432252189 0.294913261933902 0.303019360342217 0.29818048298423 5 5 + 22672455 22673003 22672738.909 22669941 22673332 + gene protein_coding_gene TRUE TRUE AT5G55930.1 ATOPT1 (oligopeptide transporter 1); oligopeptide transporter oligopeptide transporter Identical to Oligopeptide transporter 1 (AtOPT1) (OPT1) [Arabidopsis Thaliana] (GB:Q9FG72); similar to ATOPT2 (oligopeptide transporter 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G09930.1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT5 (oligopeptide transporter 5), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G26590.1); similar to Ribosomal protein S2; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93772.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93771.1); similar to Ribosomal protein S2; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93773.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) 0.675089731943558 6.27312916465016 7.1978357959055e-05 0.00148892149239138 10.0185506020446 7.65075382294585 0.675089731943558 0.118250573916199 AT5G62610_at 8.76976574392535 8.8104990879127 9.46016448334132 9.22196017112607 9.39373557487741 9.12706234216632 8.28209149772564 8.25984504846847 8.50779931803735 8.3372291185353 8.72516883567436 8.77959853704956 8.81060443405435 8.79614317854341 8.49615629907528 8.8164800673942 8.38331727457376 8.75202376922139 8.23516293211519 0.11988376051847 0.116891803187748 0.124282214503679 0.124224495602172 0.122559788860250 0.121075173486390 0.127356297241817 0.129146721455250 0.119648773583057 0.125723921042067 0.121747841419803 0.117434528980905 0.117667715563785 0.119695134920867 0.120069464811463 0.116047468591349 0.143659710141861 0.125388618414306 0.122529244473423 5 5|0 -|/ 25150345 25151069 25150629.333 25150125 25152014 - gene protein_coding_gene TRUE TRUE AT5G62610.1 basic helix-loop-helix (bHLH) family protein similar to ZCW32 (BIGPETAL, BIGPETALUB), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G59640.1); similar to bHLH transcription factor [Gossypium hirsutum] (GB:AAV51936.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.552526529127705 6.2694413142755 7.23394807657966e-05 0.0014956779774583 10.0136059090700 17.4431406631984 0.552526529127705 0.0623981503052814 AT5G58730_at 4.74385633132768 5.38133965377536 5.06574292564557 5.42689923983786 5.59876906339785 5.34721327007567 4.28562599795785 4.15195750177694 3.87697821634169 4.1888190891438 4.8406491729579 5.00493829713526 4.39677167757428 5.15184766710642 4.54529745925348 4.9600257906192 4.08197395567131 4.71311593477627 3.89107190456576 0.209510497230159 0.207517536649959 0.210402632032044 0.229164130746104 0.209552643648415 0.212663599456921 0.218444564503417 0.213466055422035 0.215335978579719 0.206833561642294 0.216612142763001 0.206833561642294 0.218546912289015 0.217767102542808 0.213717030628752 0.206833561642294 0.228303709982250 0.207530142115026 0.206833561642294 5 5 - 23740858 23741979 23741414.818 23740630 23742691 - gene protein_coding_gene TRUE TRUE AT5G58730.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G10260.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP03418.1); contains InterPro domain PfkB; (InterPro:IPR011611) 0.72258283894973 6.26762937813823 7.25176210559408e-05 0.00149864651162973 10.0111757080968 9.34890078017627 0.72258283894973 0.136039728970460 AT5G66530_at 10.0815177651999 10.0854095063137 9.99441218509844 9.92352275857594 10.6378411038040 10.2416720595704 10.2265335240215 10.2857159633257 9.91956318339437 10.0265316781025 11.2109136217951 11.3252187673891 10.9006270456063 11.1153817537640 11.2622703187888 10.8642174735390 10.4274161110831 10.8163278678422 9.7159655430136 0.0802207551812606 0.07931584128843 0.0865373508524056 0.0830056153122502 0.0835529589686865 0.0843170883187146 0.0862666403759714 0.0798116831895648 0.0911520207551096 0.0901317681207045 0.084338432111859 0.079693505529582 0.080757592276898 0.0822787217835511 0.0812403887696197 0.0806695826253565 0.088179552700684 0.0828110178682556 0.0901267505627595 5 5 - 26571053 26572047 26571554.182 26570972 26572917 - gene protein_coding_gene TRUE TRUE AT5G66530.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G57330.1); similar to Os09g0327400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062890.1); similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] (GB:AAF34174.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) 0.566255494426399 6.2652388007686 7.27533704376682e-05 0.00150280219746675 10.0079686714031 20.6234031523118 0.566255494426399 0.0704000600268369 AT5G36160_at 9.39918751876012 9.55682710069535 10.5651764240934 10.5618454641094 10.8465633862640 10.4497245521399 10.8606757559609 10.5880202715947 9.38176524716597 10.4233022638976 10.9280575738264 10.5541593961686 10.4973489816866 10.6990790602921 10.4854286530736 10.5051139212270 10.4578141665310 10.6016745223623 9.87719118239422 0.0862436641311717 0.0842163048291203 0.0839165720238797 0.0830567576728596 0.0868944284818707 0.0921105292317389 0.087131573841473 0.0854001088477055 0.0967351435343185 0.0870653742243229 0.0855213774012488 0.0828454906380564 0.0822475508676491 0.0817828548362882 0.088148183412461 0.0813662786897537 0.0883641543840304 0.0860562270018722 0.0841705843079874 5 5|0 -|/ 14250556 14251336 14250933.333 14250340 14252381 - gene protein_coding_gene TRUE TRUE AT5G36160.1 aminotransferase-related similar to aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT5G53970.1); similar to Os02g0302700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046628.1); similar to Os02g0302400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046626.1); similar to putative nicotianamine aminotransferase A [Oryza sativa (japonica cultivar-group)] (GB:BAD23582.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005958); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.600824049071143 6.26366484457831 7.29090364025841e-05 0.00150511825150236 10.0058566913574 20.5960879419765 0.600824049071143 0.0876762982105793 AT5G46740_at 3.60906266855958 3.62850495308029 4.38586001633227 4.50351188154359 3.8379730500348 3.99894151083486 2.81000030313074 3.50791586393945 3.01655553782616 3.19489633174304 3.48994881487178 4.07020552876535 3.37699233194432 3.82431836454613 4.37167592399144 3.55120443195081 3.6866564653994 3.43908429269239 3.18368085459735 0.217662363658576 0.216115626019555 0.225305283481909 0.221867032814747 0.224224258906907 0.228170754486508 0.224854826578343 0.220431302424577 0.222956748298023 0.217675330393868 0.219643702878204 0.228993741230137 0.218059881142889 0.21704487577616 0.216908435203831 0.216115626019555 0.226910750887200 0.2251642584454 0.224856905996216 5 5 - 18982733 18983536 18983277.727 18982498 18985969 - gene protein_coding_gene TRUE TRUE AT5G46740.1 UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin-specific protease 20, putative (UBP20) [Arabidopsis thaliana] (TAIR:AT4G17895.1); similar to Os02g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048381.1); similar to putative ubiquitin-specific protease 23 [Oryza sativa (japonica cultivar-group)] (GB:BAD72518.1); similar to Os06g0184300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056992.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.693625264361775 6.2634034459693 7.2934923570056e-05 0.00150511825150236 10.0055059032160 7.2142071195948 0.693625264361775 0.125654482453302 AT5G22830_at 9.4655794874706 9.27368063454952 10.3342285724334 10.0697562245049 10.4739650729852 10.0441087023443 9.8795432729029 9.60277036203592 9.76520033059473 9.80674819049143 10.6647581581577 10.3143392587616 10.3333780247189 10.3664487494145 10.2825358389968 10.3952037091434 10.0895840351164 10.3920635613261 9.67500620365546 0.0825574141692101 0.0840880199249358 0.0825339090948426 0.0835595099684846 0.0802037050460327 0.0834752063782514 0.0818197455850844 0.082401602337635 0.0866954319565087 0.0805249686257485 0.0801430483232442 0.0801430483232442 0.0806644009757548 0.0812047683170647 0.0813715145743176 0.0801430483232442 0.0881555885203631 0.0821676337224326 0.0801430483232442 5 5|0 +|/ 7629393 7630594 7629999.714 7627600 7630996 + gene protein_coding_gene TRUE TRUE AT5G22830.1 GMN10 (Arabidopsis thaliana Mg transporter 10) putative Mg(2+) transport protein similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98245.1); similar to Os03g0684400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050919.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.640462606267227 6.26130628306697 7.31429696050024e-05 0.00150869350056096 10.0026912108768 19.9448409537542 0.640462606267227 0.105001626545295 AT5G10400_at 5.45769124991026 5.98400626824468 6.99084292975531 7.06067672429742 5.33225669545486 5.66463718995359 5.89767673972702 5.86435401622568 5.46852605459917 6.1823669719049 6.92516983587648 7.38586291020446 6.16833199421107 6.58851633044292 7.49708361634682 6.84652060490815 6.45032789279671 6.04513424350383 6.0536579479509 0.183216966435624 0.179681021342460 0.184478800805671 0.185358208228689 0.190717071694152 0.188748082784542 0.185475157569067 0.187461688963211 0.199997562785693 0.186545078349614 0.184929675311456 0.184094460499941 0.17736715232072 0.182603412140767 0.195780502279543 0.180633934112683 0.186281629697035 0.178436760582631 0.179770184435539 5 5 - 3270544 3270848 3270713.636 3270290 3270953 - gene protein_coding_gene TRUE TRUE AT5G10400.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.649011376694848 6.25970701105373 7.33020507142395e-05 0.00151110568188251 10.0005443167109 12.3514604367068 0.649011376694848 0.108552523357872 AT5G55220_at 8.85210373699515 8.84777705932052 9.2679387375881 9.06649046185852 9.7844282189141 9.5534371350655 9.4639168521975 9.125496668392 8.63040457994293 9.24877792790224 9.77718428222043 10.1910063306290 9.61250619051196 9.3214799834989 10.6239117959891 9.86009398231988 9.69876146176473 9.32184958309736 9.0665659389959 0.0931696195949533 0.0915191064960005 0.0899590709975366 0.0946826058589803 0.0910371864393482 0.092474881267531 0.0901593697085433 0.0910347451757455 0.095441201143863 0.0957775195745722 0.0899806043847447 0.0897919408673236 0.0929304312828122 0.095058337229651 0.0890510097232701 0.0890510097232701 0.0890694474558523 0.093967261289485 0.0940057083033447 5 5 + 22416917 22417870 22417260.7 22414842 22418068 + gene protein_coding_gene TRUE TRUE AT5G55220.1 trigger factor type chaperone family protein similar to Os06g0308000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057472.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL52285.1); contains InterPro domain Bacterial trigger factor, C-terminal; (InterPro:IPR008880); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179); contains InterPro domain Bacterial trigger factor, N-terminal; (InterPro:IPR008881) 0.582341555718579 6.25943023500025 7.33296195291891e-05 0.00151110568188251 10.0001727282245 18.6365812838919 0.582341555718579 0.0790170758826993 AT5G18210_at 4.5752368405634 4.78575667544716 5.62879730082977 5.57704727450595 6.2077779102134 5.05797938986077 4.53545478517829 4.07112270227471 4.32617797034908 4.30992397887302 5.41250477366864 5.22196928355536 4.82342162300293 5.19421725012199 5.19933514994615 4.72265007708496 5.01266242203136 5.32490498981925 4.23909972803401 0.223703768253276 0.218221136382856 0.216961723200957 0.219249191403601 0.231971368892178 0.228319269563775 0.215375684776715 0.236134759677324 0.228512275524949 0.227093900540749 0.213163177374129 0.213163177374129 0.219102416013144 0.221740787316205 0.217989299766907 0.213163177374129 0.220274306021875 0.235646886610479 0.213163177374129 5 5|0 +|/ 6018076 6018611 6018277.5 6017867 6019995 + gene protein_coding_gene TRUE TRUE AT5G18210.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G03980.1); similar to short chain dehydrogenase [Solanum tuberosum] (GB:BAE46415.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.974116010860857 6.25726070252606 7.35461055211772e-05 0.00151484683101520 9.9972596030953 9.75774265414544 0.974116010860857 0.217845345128232 AT5G43790_at 3.91889105327343 4.03473031644531 4.59114737329666 5.13950288883169 5.35892975071298 5.10994068889237 4.53873036964586 4.37753225796926 3.18330309919355 3.93717187914356 3.91291481578923 4.30216288012285 4.18861779715906 4.13190286792183 4.07847299067277 4.7262437834549 4.93906129108884 3.58425295428218 4.16665841572987 0.20945597752369 0.207887040034394 0.215334508724636 0.208845138039609 0.207598926191960 0.210904478122494 0.212470090820540 0.209470146478546 0.211657506004171 0.206364867147369 0.208948469120985 0.206605527236467 0.208925482270576 0.215847016696914 0.211818873569709 0.212677270594266 0.218318578291192 0.208553733375313 0.207238118360963 5 5 - 17609346 17609813 17609611.182 17609234 17610708 - gene protein_coding_gene TRUE TRUE AT5G43790.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G37380.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE78210.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.651492525319548 6.25530257225242 7.37420852448669e-05 0.0015181622553144 9.99462973160843 8.63134132267533 0.651492525319548 0.109735337857438 AT5G10450_at 12.1439718717648 12.0514949481175 12.6218430654068 12.554337369242 12.9941478822825 12.7768581966565 12.2451500596311 12.0037696253684 12.2525593189355 12.1224781106735 12.7134241931558 12.6330397738658 12.7282648356803 12.6729883090688 12.5579588449952 12.7198860601035 12.6760353113690 12.7347200871266 12.2611916772752 0.0768523696869727 0.074432605624835 0.0764329037503133 0.0786319718864356 0.0753516466422736 0.0790844267757503 0.074798266189907 0.0751098632976692 0.0840466304610716 0.0754136120058415 0.0764200829987154 0.0747713861086249 0.0751538187996682 0.0760321135253668 0.0792455107693254 0.0747396093472055 0.0747953573105878 0.0770973599663056 0.0750216324828501 5 5 - 3284705 3286072 3285543.091 3283854 3286348 - gene protein_coding_gene TRUE TRUE AT5G10450.1|AT5G10450.2 GRF6 (GF14 LAMBDA); protein phosphorylated amino acid binding Encodes a member of the 14-3-3 gene family that is a lambda isoform (14-3-3λ). Interacts with APX3 (ascorbate peroxidase) and AKR2 , suggesting a role in mediating oxidative metabolism in stress response. This protein was shown to colocalize and interact with SERK1 by which it is phosphorylated. Identical to 14-3-3-like protein GF14 lambda (General regulatory factor 6) (14-3-3- like protein RCI2) (14-3-3-like protein AFT1) (GRF6) [Arabidopsis Thaliana] (GB:P48349;GB:P42647;GB:Q9LX97); similar to GRF8 (GENERAL REGULATORY FACTOR 8), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G65430.1); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 lambda (General regulatory factor 6) (14-3-3- like protein RCI2) (14-3-3-like protein AFT1) (GRF6) [Arabidopsis Thaliana] (GB:P48349;GB:P42647;GB:Q9LX97); similar to GRF8 (GENERAL REGULATORY FACTOR 8), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G65430.2); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.546581655067856 6.25426778504035 7.3845878129548e-05 0.00151957754042095 9.99323972626012 24.8697546502497 0.546581655067856 0.0595942378362896 AT5G05710_at 7.1910936178163 7.28874061615991 7.70325854205672 7.8758607601353 8.18079469182095 8.1895567265796 6.83361823270379 7.3102720557294 7.38530812719853 7.12498341478817 7.9959161080434 7.74436082902469 7.49294877677247 7.72931821907122 7.39939826631997 7.76872218599957 7.46063373871828 7.69041092381606 7.3529187004529 0.204339068066812 0.198549359649509 0.198589019604555 0.204034484666586 0.198452155661068 0.205077004077546 0.213040398554909 0.196214698070778 0.202907703378518 0.198555162364478 0.196024692129828 0.192738477569374 0.199076271239221 0.204129661367929 0.195146499533955 0.192473783106677 0.208014144732822 0.201573402496023 0.192473783106677 5 5 + 1715955 1716322 1716135 1715876 1716496 + gene protein_coding_gene TRUE TRUE AT5G05710.1 pleckstrin homology (PH) domain-containing protein similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to pleckstrin homology (PH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB63699.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) 0.601956716518318 6.23752529718055 7.55471593034995e-05 0.00155311173602558 9.97072763597611 15.0456245946005 0.601956716518318 0.0893542250859934 AT5G23630_at 8.4639964806747 8.33895027690547 8.9883116467796 9.20706428159621 9.10595409476246 8.49787515058192 8.52287202933435 8.21971348335058 7.95183037804797 7.83168915979603 8.90029613090147 8.79154609956137 8.67652365660393 8.64735494256106 8.91086661426212 8.85143678643251 8.16112235547894 8.71193057269325 7.88776376660072 0.171240100444861 0.165318058618119 0.161669013610686 0.158306800971759 0.16264918391931 0.173082396329291 0.169676623746699 0.176223030429204 0.182524409583419 0.171187500488347 0.166507485968307 0.171265243307662 0.158780449415835 0.158564152591188 0.161426125060250 0.158306800971759 0.181497677654246 0.162700726950696 0.174298762932883 5 5 - 7960826 7961323 7961034.091 7960490 7967647 - gene protein_coding_gene TRUE TRUE AT5G23630.1 (MALE GAMETOGENESIS IMPAIRED ANTHERS); cation-transporting ATPase A novel member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. Identical to Putative cation-transporting ATPase (EC 3.6.3.-) [Arabidopsis Thaliana] (GB:Q9LT02); similar to ACA2 (CALCIUM ATPASE 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G37640.1); similar to Probable cation-transporting ATPase 13A1 (GB:Q9HD20); similar to PREDICTED: similar to ATPase type 13A [Apis mellifera] (GB:XP_396194.2); similar to KIAA1825 protein [Homo sapiens] (GB:BAB47454.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain P-type ATPase of unknown pump specificity (type V); (InterPro:IPR006544); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.689687551263687 6.23378370878497 7.59330746185745e-05 0.00156030561871403 9.96569091973312 16.9664983869782 0.689687551263687 0.125408450472458 AT5G63580_at 2.22715100350904 2.01714331305073 2.31660172437297 2.53270344977727 2.03496603122589 2.76354692653621 3.0646702985558 3.27596806569565 2.19743750990983 2.43931368894446 4.27067564810671 3.9072032612161 3.05945462761752 5.13329453811035 3.72796974936284 4.73310158160986 4.4279650406774 4.20750533559946 2.81374499579696 0.224319505343562 0.224139554852675 0.217137167772181 0.219687782518224 0.218192323399061 0.222816539267842 0.218640913270701 0.217157914170843 0.228108517269142 0.217137167772181 0.226748009016994 0.220277711812014 0.218644278425604 0.226225134139836 0.221050087013020 0.22941866888907 0.226982125947228 0.224371485483334 0.222053015833792 5 5 + 25472140 25473154 25472685.273 25471956 25473702 + gene protein_coding_gene TRUE TRUE AT5G63580.1 flavonol synthase, putative encodes a protein whose sequence is similar to flavonol synthase similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (GB:O04395); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.732809427006197 6.22944472148438 7.63832551968667e-05 0.00156881261061948 9.95984738912184 5.86254132875942 0.732809427006197 0.141257564432534 AT5G66490_at 8.43550542329719 8.54653818913276 9.44191678392441 9.38408724657987 9.636867585168 9.58410628011001 8.75796181085689 8.96912863855904 8.69955501957202 8.94608703966188 8.89862369481803 8.8713791122057 9.3793950758431 9.1516661777668 8.47044861347739 9.32810056017907 9.52625421787686 8.88803830469081 8.92397596140134 0.082131563152892 0.0802906553350887 0.0850934194201348 0.0869969082249228 0.079361417429333 0.0866351408435067 0.0787866476686098 0.0883665190080411 0.0900948409497886 0.0801655879658683 0.0809913847747744 0.0802509586157767 0.0809122104963154 0.0857647086164746 0.0843009102958279 0.0806364142745524 0.088032068794829 0.0852811836691918 0.078674055637117 5 5 - 26564663 26564948 26564839.091 26564453 26564994 - gene protein_coding_gene TRUE TRUE AT5G66490.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50900.1); similar to hypothetical protein [Thellun (GB:ABB45855.1) 0.521079918939789 6.22418567768652 7.6932732914941e-05 0.00157935001498639 9.9527609859019 18.054902774613 0.521079918939789 0.0434528216828563 AT5G41000_at 3.01144563545773 3.28398059704553 3.35212608144765 3.03256894209639 3.42398926355111 3.51347230019455 2.90578068993871 2.72426661582581 3.06022111719720 2.65442764171849 3.76762996903487 4.3077287961433 3.77410060758027 3.62251196333795 4.17841351197008 3.34308248150757 3.15312242794085 4.02591996973166 3.15363343075993 0.214565814171463 0.221121185035281 0.226752556238079 0.225252852310731 0.217106793243456 0.221982197951059 0.221081282582425 0.218748470606435 0.239946199239892 0.225922322440328 0.218699515701380 0.214670975913420 0.220582897678018 0.224071440852471 0.222939258922331 0.214723670630652 0.225872436056306 0.21468057569558 0.221742969378862 5 5 + 16440387 16440859 16440610.7 16438008 16441058 + gene protein_coding_gene TRUE TRUE AT5G41000.1 YSL4 (YELLOW STRIPE LIKE 4); oligopeptide transporter Arabidopsis thaliana metal-nicotianamine transporter YSL4 similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL6 (YELLOW STRIPE LIKE 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT3G27020.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91892.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91885.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91886.1); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) 0.582320207468042 6.22323774742984 7.70322249221415e-05 0.00158064407272013 9.95148323692803 6.5197826552602 0.582320207468042 0.0806788644484768 AT5G58720_at 7.5813836709075 7.86896388725532 8.3450148731277 8.2832491007923 8.64658233540461 8.3345806926104 6.92900519315704 7.67076477236086 7.29418695854238 7.11000672333625 7.97974023900871 7.82856472761206 7.80380076481716 8.09267852110798 7.4452140964637 8.16776933682917 7.57375866072073 7.50419835332683 7.15290249187288 0.19318253141754 0.186988073515288 0.198422142174324 0.193209745368204 0.196785437875185 0.192358933639937 0.197949834187101 0.194874101337375 0.207524152543698 0.203207670294869 0.188144136201049 0.186258652385743 0.191300690310423 0.196772357094708 0.199306347961832 0.186258652385743 0.208525573328291 0.193531919437645 0.196629004707982 5 5|0 -|/ 23737255 23738452 23737860.857 23736928 23740363 - gene protein_coding_gene TRUE TRUE AT5G58720.1 PRLI-interacting factor, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15390.1); similar to Os01g0225100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042457.1); similar to UBA-like; HSC20, C-terminal oligomerisation [Medicago truncatula] (GB:ABD28681.1); similar to Os02g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047541.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625) 0.751797116232764 6.22068060219774 7.7301303991694e-05 0.00158466545550734 9.94803569708665 15.4500252217368 0.751797116232764 0.148269544752330 AT5G03345_at 9.22007723061262 9.47653815573186 9.80531772753167 9.73622330686957 10.2340569855379 9.72321250336905 9.4015943940389 9.3443642364247 9.32377153652856 8.98946293067078 10.0329965846044 10.1223425741806 9.87191486385462 10.0315010306668 9.92415814140844 9.77433763705897 9.20418232740157 9.87206625052525 9.04491034885065 0.106448255948958 0.103327514523343 0.102909455195837 0.102487940957863 0.103837685183269 0.105838114000382 0.104114153180547 0.106307421220156 0.115237332530489 0.106756682412518 0.102976707696022 0.102487940957863 0.106707155906402 0.104121304337074 0.107088659440478 0.102487940957863 0.115839144440502 0.104561922432553 0.103297014842389 5 5|0 +|/ 814215 815448 814751.6 814084 815618 + gene protein_coding_gene TRUE TRUE AT5G03345.1|AT5G03345.2 similar to PREDICTED: similar to CG15168-PA [Apis mellifera] (GB:XP_001121144.1); similar to Os12g0566400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067053.1); contains domain FAMILY NOT NAMED (PTHR21181); contains domain gb def: Hypothetical protein (PTHR21181:SF6) 0.624432473743794 6.21787127887813 7.75980807764855e-05 0.00158999756440520 9.94424703949406 19.1044575832958 0.624432473743794 0.100130275054797 AT5G06580_at 6.97110176743601 7.05904738896803 7.48864212621936 7.59369157508698 8.17796442675428 7.49024230078092 7.09139628106647 6.88177503777658 6.65995826419037 6.88554854395217 7.52926024861917 7.50221717492419 7.32339642948635 7.30581042374758 7.47901266121315 7.67314222367484 7.17445400803384 7.58588954149319 6.71066616769627 0.195741930587201 0.176664718182878 0.197270126227585 0.175493754283436 0.182925111355652 0.183296547103226 0.173254482892722 0.175424946364342 0.191485784772884 0.178639647228810 0.178233418324715 0.18015561723977 0.178274485769061 0.183420091156988 0.177191424640867 0.180170367545596 0.18429536272237 0.177237004459750 0.180722355006639 5 5|0 -|/ 2011491 2013376 2012394.111 2011289 2016540 - gene protein_coding_gene TRUE TRUE AT5G06580.1 FAD linked oxidase family protein Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. similar to FAD linked oxidase family protein [Arabidopsis thaliana] (TAIR:AT4G36400.2); similar to Putative FAD-binding oxidase [Burkholderia xenovorans LB400] (GB:YP_557074.1); contains InterPro domain FAD linked oxidase, C-terminal; (InterPro:IPR004113); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094) 0.690697584342358 6.212765563631 7.81405798343227e-05 0.00160035714775947 9.93735843044751 14.4435853617671 0.690697584342358 0.126658117001684 AT5G11980_at 7.04556081975315 7.34969396167303 7.28174228925354 7.2385157784539 7.88095431908374 7.55831997281622 7.23035127359477 7.14244402648392 6.68730841014134 6.70682522292572 7.70500161199918 7.94916966505442 7.25194890381581 7.5009254950196 8.04149526116552 7.35333513712532 6.29360014740866 7.75805915458086 6.48260415580388 0.225106610561094 0.213435690283419 0.225745406113564 0.220087332017080 0.224897468529556 0.223536254574265 0.223366988879146 0.214804253588325 0.21904599968817 0.213996770883276 0.212236021111392 0.214428305293784 0.214417062497074 0.219310462013445 0.211674339758861 0.212805525184246 0.231103890321448 0.211674339758861 0.217422527867815 5 5 - 3868839 3869678 3869272.273 3868653 3872270 - gene protein_coding_gene TRUE TRUE AT5G11980.1 conserved oligomeric Golgi complex component-related / COG complex component-related similar to Os12g0538300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066940.1); similar to Gol (GB:CAL50480.1); contains InterPro domain Dor1-like protein; (InterPro:IPR007255) 0.576991614294913 6.21127190836146 7.83000531942806e-05 0.00160286609953238 9.93534245701862 14.3945833976281 0.576991614294913 0.0785801774142797 AT5G27360_at 3.61366895012570 4.45866366253396 5.0806574951238 5.20507535771243 5.66168455572959 5.31210985373242 5.75300415477462 5.70349992439371 5.2971115823108 5.98184854773566 7.32711598701124 6.25146578656114 6.15340576144859 7.00746111448951 6.6077994032505 6.52146891863443 7.1982121859869 7.12938351797005 5.6401480287836 0.221156660154866 0.224740019585647 0.229254608718560 0.218903127785679 0.21770175527088 0.225763638055391 0.229343697686379 0.225829288017855 0.231821610084084 0.220495943069233 0.219990367782884 0.218371960165487 0.220146555838005 0.221931454335073 0.228655413205780 0.215402304197730 0.233866828814702 0.215139120144209 0.219599776591084 5 5|0 +|/ 9660426 9662383 9661351.8 9657029 9662562 + gene protein_coding_gene TRUE TRUE AT5G27360.1 SFP2 (SFP2); carbohydrate transporter/ sugar porter Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence. Identical to Sugar transporter ERD6-like 18 (Sugar-porter family protein 2) (SFP2) [Arabidopsis Thaliana] (GB:Q94CI6); similar to SFP1, carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G27350.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G05160.1); similar to carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G05165.3); similar to Os03g0363600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050166.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.783754503713297 6.20285544162733 7.92052012878657e-05 0.00162063005097497 9.92397656065515 11.3056663962803 0.783754503713297 0.159937435772077 AT5G57440_at 4.62143154980707 4.70411976844812 3.47385150758230 4.44158785427792 5.6405603517193 5.52780058353333 4.44659366689248 4.58659725317897 4.98682711321931 4.25500113278071 6.41011785116096 6.43041471329345 5.30630040656908 6.3638575873306 6.76266675103181 5.52558157885062 5.6503498757431 6.07842326969504 4.6057743334228 0.259837469951779 0.249726882097524 0.268434438466854 0.254020858296271 0.244546662845528 0.262204261563612 0.249449283024557 0.242366289885603 0.255300043411060 0.242387973247385 0.246576018892505 0.242278914554019 0.246668069081694 0.242278914554019 0.249375002391155 0.242278914554019 0.253050337869413 0.243259628254934 0.249249944674176 5 5|0 -|/ 23288794 23289646 23289252.2 23288353 23290155 - gene protein_coding_gene TRUE TRUE AT5G57440.1 GS1 (GLYCEROL-3-PHOSPHATASE 2); hydrolase a member of haloacid dehalogenase-like hydrolase family similar to GPP1 (GLYCEROL-3-PHOSPHATASE 1), hydrolase [Arabidopsis thaliana] (TAIR:AT4G25840.1); similar to HAD-superfamily hydrolase subfamily IA, variant 3; Epoxide hydrolase N-terminal domain-like phosphatase [Medicago truncatula] (GB:ABE82173.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.815680496215805 6.19415813878706 8.01523461342141e-05 0.00163923614078924 9.91222022901304 10.0212335822717 0.815680496215805 0.170936205804751 AT5G20610_at 6.75650697778957 7.17574734875912 7.89875958324518 7.72689858061459 7.45068830110869 7.78026203763196 6.55265124273402 6.42450155213935 6.66079463428418 6.73132357520104 6.98679707787885 7.17323690915723 6.70896258810997 6.95758088535557 6.38237850000975 7.42206372408112 7.11212747720317 6.92261420170722 6.72039525170579 0.185905434722667 0.174417541431307 0.178277014469673 0.173514111044141 0.173432998306874 0.181211290530061 0.174305595135354 0.186957807789095 0.191417782437693 0.175936585316191 0.183969007425502 0.173313404393804 0.173313404393804 0.187194221684782 0.190427108979835 0.1789543395283 0.181628996895103 0.184823320887659 0.173313404393804 5 5 + 6972273 6972693 6972476.364 6968692 6972997 + gene protein_coding_gene TRUE TRUE AT5G20610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26160.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82279.1); similar to Os01g0714100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044057.1) 0.620424681001055 6.19343029442938 8.02321577358565e-05 0.00164009477857967 9.91123587045826 14.0519476150869 0.620424681001055 0.0994635175034216 AT5G54620_at 0.997305983229505 1.16839281599931 1.98940565293981 2.07753296518223 1.66633441507287 1.92678595532402 1.15150392330392 0.764523708278797 1.34150594610573 1.5150350576123 1.93290384253190 1.23360757483694 1.63257743916012 1.48545020011208 1.69487536817711 1.96436988289398 1.88047809224488 1.80993075749679 1.38300431669361 0.190708902945976 0.197798997852703 0.189760148715124 0.193154630528178 0.193910475188692 0.191477472540817 0.192782449962589 0.192758262834641 0.210025846507678 0.19244487170688 0.192801083723423 0.196517262971960 0.193174204283205 0.199046129096489 0.195587667088299 0.196582786889139 0.189760148715124 0.208364202798455 0.190289288814997 5 5 - 22204987 22205492 22205310 22204987 22206972 - gene protein_coding_gene TRUE TRUE AT5G54620.1 ankyrin repeat family protein similar to ANK (ANKYRIN), protein binding [Arabidopsis thaliana] (TAIR:AT5G54610.1); similar to Ankyrin [Medicago truncatula] (GB:ABE88815.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.592837755319016 6.18824535786586 8.08031812240817e-05 0.00165098916120778 9.90422130150104 3.02645113649244 0.592837755319016 0.0873241822927464 AT5G14420_at 5.97971358143888 6.11199266069088 6.4158828904326 6.6979568549634 7.92951079631453 6.66278356837252 5.59859882192929 5.56434833518038 5.74294424358162 5.22754278109509 6.67950524252107 7.14232599776115 6.27767770812648 6.7908885534904 6.15983960152379 6.6736177600339 5.35396904028143 6.06531268261475 5.61437021729692 0.255613180157269 0.245000500000555 0.261330291784034 0.248120975598874 0.247514276690070 0.274924426337196 0.260031366622636 0.249244855181859 0.258994236808359 0.248037272258030 0.243955739209642 0.243955739209642 0.243955739209642 0.247600181656941 0.258344036098074 0.243955739209642 0.270339042222803 0.252012830730762 0.248169030423274 5 0|5 /|- 4648713 4649158 4648849 4648114 4651312 - gene protein_coding_gene TRUE TRUE AT5G14420.1|AT5G14420.2|AT5G14420.3|AT5G14420.4 copine-related similar to copine-related [Arabidopsis thaliana] (TAIR:AT3G01650.1); similar to RING-finger protein [Capsicum annuum] (GB:AAX20031.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.98873825184024 6.1827883667212 8.14088738842668e-05 0.00166258131546174 9.8968343093175 12.3306873489746 0.98873825184024 0.225823701081000 AT5G63510_at 9.05090559814372 9.26320760945243 9.45258452213506 9.65566104672352 9.67476443588527 9.24804266497656 9.3274776254004 9.3089672252295 8.31098200406125 8.46213853616028 9.334645064911 9.62001288441222 9.2909265059106 9.31891596502791 9.51230483903361 9.20446550739135 9.08195954063383 9.34414043333455 8.46903985234061 0.124678375487963 0.124215096839769 0.131422189549044 0.126256057004217 0.125147868730358 0.135789359338521 0.126616549207691 0.128419679973314 0.155883181023332 0.132694493190533 0.127939957061943 0.124405034579718 0.129995494869028 0.124329951260247 0.128634812145421 0.124215096839769 0.138090914307075 0.136800719815983 0.124956046861068 5 5|0 +|/ 25441443 25442774 25442412.1 25441226 25443067 + gene protein_coding_gene TRUE TRUE AT5G63510.1 GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex. Identical to Unknown mitochondrial protein At5g63510 [Arabidopsis Thaliana] (GB:Q9FMV1;GB:Q8LBM1;GB:Q93XY3); similar to GAMMA CAL2 (GAMMA CARBONIC ANHYDRASE-LIKE 2), acyltransferase [Arabidopsis thaliana] (TAIR:AT3G48680.1); similar to mitochondrial NADH:ubiquinone oxidoreductase 29 kDa subunit [Chlamydomonas reinhardtii] (GB:AAS48196.1); similar to Os02g0508000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046924.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) 0.597245765634047 6.18066011366882 8.16464142667567e-05 0.00166664746542929 9.89395213208378 18.2489387443779 0.597245765634047 0.0897128335381731 AT5G12120_at 8.79155218269103 8.72403499304968 9.09584978565186 9.33613264202125 9.27978382353528 9.38855257537937 8.50569130966015 8.44157002935474 8.70152371218705 8.63427438500348 8.93649940196739 9.12076394788771 9.09365383784132 9.01220934134491 9.05025843791064 9.14683562801177 9.15664065865594 9.13232768827467 8.74380211168076 0.0950638378951452 0.0924848252945708 0.0961605198054314 0.0969537669518502 0.0991988718005801 0.097863692059715 0.096902499139906 0.0954097101548165 0.104971427808787 0.096984917217927 0.101301725548267 0.098116902951626 0.099702328269998 0.103123378593424 0.100096916105094 0.0932667698093276 0.0994573852381589 0.0924848252945708 0.0942208810058216 5 5 - 3916278 3916771 3916557 3916049 3918660 - gene protein_coding_gene TRUE TRUE AT5G12120.1 ubiquitin-associated (UBA)/TS-N domain-containing protein similar to ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26920.1); similar to Calcium-binding EF-hand; UBA-like [Medicago truncatula] (GB:ABE81075.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.523658063035535 6.17963143680101 8.176149400305e-05 0.00166821117681558 9.892558806673 17.8325702613482 0.523658063035535 0.0484047852470973 AT5G41180_at 2.27880608099429 2.91437136806292 3.71108074690558 3.71911411206953 2.83371842047671 2.63697701800961 1.92703085041929 1.6445367101054 2.31454314383678 2.27672093508965 2.87021002204781 2.91169988119121 2.42638601872138 2.64608251213844 3.34364204546495 2.24377137589457 2.35305107567168 2.67850655803222 2.46761001479209 0.244653670372313 0.248410241595164 0.261915228508388 0.256650851015089 0.244653670372313 0.252903262503103 0.247386846661438 0.253040775355721 0.245564338459337 0.255388343022798 0.249672586078014 0.249183065743524 0.254896780020271 0.247915140604102 0.245448405443436 0.244653670372313 0.250266850671919 0.255776052851057 0.254170766078818 5 5 + 16503658 16504414 16504082.909 16501099 16504654 + gene protein_coding_gene TRUE TRUE AT5G41180.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G63430.1); similar to H0306F12.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86176.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.682623488437828 6.1774713444 8.20037131644367e-05 0.00167236627153912 9.88963247976308 5.22676777207281 0.682623488437828 0.125093253862236 AT5G44785_at 5.44649607916146 5.83953990890357 5.57358917223543 5.40844691154978 6.55813292725168 5.93875669988644 5.90254507060547 5.70917649012719 4.10862564686333 5.44012302935873 5.53472296631979 6.65172245089567 5.56354051799856 5.79698253732087 7.0564520955292 7.12022295708374 6.7654607701518 4.99109695391756 5.19717866745713 0.228193926961271 0.222090221786162 0.248279301927549 0.235546850525258 0.226153668420296 0.243674366906541 0.228265657543101 0.227130065161039 0.24232332589331 0.22639534460786 0.222090221786162 0.225547390912445 0.225349221674535 0.236360532516381 0.231162618944833 0.227734758056747 0.224272183794362 0.230331297550411 0.222909554989619 5 5 - 18088140 18088993 18088503.364 18087908 18090356 - gene protein_coding_gene TRUE TRUE AT5G44785.1|AT5G44785.2 single-stranded DNA binding similar to PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9), single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G20010.1); similar to mitochondrial SBP40 [Solanum tuberosum] (GB:AAX34397.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Single-stranded DNA binding; (InterPro:IPR010913); contains InterPro domain Single-strand binding protein/Primosomal replication protein n; (InterPro:IPR000424) 0.707504041061913 6.17693545878623 8.20639229804845e-05 0.00167280734452994 9.88890639446366 11.3472525428211 0.707504041061913 0.134357052861538 AT5G02450_at 9.11204109634115 9.41410667101926 9.46912909438039 9.49150379080706 9.6574204183522 9.46080425693265 8.91314842213592 8.96127286396556 9.19970957030751 8.86836743561846 9.9291221106162 10.2502504873057 9.55400940592962 9.88549663039352 10.2606553364791 9.57116226949245 8.77715152485941 9.43483916540171 9.04217673122585 0.120250736327579 0.118289839880425 0.124555226746482 0.116861808902628 0.116858503425433 0.120066432327648 0.120555422505002 0.122904872484731 0.123555509487312 0.122332436737329 0.116972839803359 0.119776388920947 0.116522740249665 0.125977626905342 0.118182331458962 0.118619061573538 0.13236793200401 0.118050796554524 0.118511420893264 5 5 + 533499 534361 533861 533104 534654 + gene protein_coding_gene TRUE TRUE AT5G02450.1 60S ribosomal protein L36 (RPL36C) Identical to 60S ribosomal protein L36-3 (RPL36C) [Arabidopsis Thaliana] (GB:Q9LZ57); similar to 60S ribosomal protein L36 (RPL36B) [Arabidopsis thaliana] (TAIR:AT3G53740.4); similar to ribosomal protein L36 [Triticum aestivum] (GB:AAW50980.1); contains InterPro domain Ribosomal protein L36E; (InterPro:IPR000509) 0.545328373672518 6.17558780574393 8.2215548992975e-05 0.00167511057324777 9.88708023341447 18.6822218827553 0.545328373672518 0.063044675084576 AT5G49020_at 6.72616803893675 6.27807947377593 6.65066758759302 6.19598784038987 6.84325539005768 6.9070113123542 6.4961356506867 6.22661385359923 5.38301113476051 5.04160679917612 6.18843815891599 6.72581389632408 6.26642158322689 5.87809491864078 7.08700815820618 6.01678271935392 6.68045953283174 6.7062325915766 5.53906885722002 0.251962393929359 0.23697167344626 0.234561068486349 0.232531456976278 0.242242100000862 0.234042041134869 0.238126837590588 0.238365382032802 0.237632884505165 0.251078448080186 0.237463745024755 0.242827320053919 0.235325387211034 0.244097553535215 0.244146650257344 0.232531456976278 0.250061770563509 0.240232737320739 0.239847400137519 5 5|0 +|/ 19891100 19891885 19891356.571 19888477 19892146 + gene protein_coding_gene TRUE TRUE AT5G49020.1|AT5G49020.2 protein arginine N-methyltransferase family protein similar to protein arginine N-methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G06930.1); similar to Os07g0671700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060600.1); similar to ar (GB:CAL25348.1); contains InterPro domain Methyltransferase small; (InterPro:IPR007848); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) 0.669954396424007 6.17340658113934 8.24615976784043e-05 0.00167933456075034 9.8841239471696 12.4229325810592 0.669954396424007 0.120422155569761 AT5G14620_at 3.51885544330863 3.84803416774065 3.99986104457936 4.46794641371496 4.63353720057801 4.76924266748668 3.49276445054754 3.6179640249471 3.14488443708356 3.21722555393026 3.69466401596917 3.69527864206598 3.63167095860586 3.51702509969487 3.91951782714363 3.68047768074249 3.92448658350365 3.46140294064651 3.47973896978772 0.151180428026974 0.148376062933811 0.151011399862179 0.149620357572329 0.151055760609019 0.154256924209665 0.150140030178813 0.153475212868300 0.158052023829086 0.150669491090051 0.149021432378669 0.151867733305866 0.149407273909977 0.151026801795372 0.149784753394158 0.147649930732371 0.152898521290657 0.151905188278486 0.150190839866049 5 0|5 /|- 4715465 4718357 4716815.65 4715256 4718707 - gene protein_coding_gene TRUE TRUE AT5G14620.1 DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. similar to DRM1 (DOMAINS REARRANGED METHYLASE 1) [Arabidopsis thaliana] (TAIR:AT5G15380.1); similar to DNA methyltransferase [Nicotiana tabacum] (GB:BAC67060.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.629095729116557 6.17225055040554 8.25923212495656e-05 0.00168120708297772 9.88255684987591 7.52911657101971 0.629095729116557 0.104056583976689 AT5G45710_at 5.50042367246638 5.62760691651728 6.09731278922918 6.38612137068607 6.73190044955385 6.08643521573418 5.62253262022371 5.32405983226899 5.5384654448863 5.01008501961454 6.18612253945232 5.95296763008181 6.01502600103861 6.60816775559807 5.41900812739818 6.24344643621762 5.95468968345919 5.70202072338375 5.65684050382267 0.227434411800901 0.224868634531000 0.223838724798031 0.224559601596745 0.226763203702846 0.220207234927776 0.225910115419668 0.226894238976691 0.231522411121204 0.226909653385706 0.222722639450062 0.220207234927776 0.220207234927776 0.225040924203501 0.224379028249464 0.222138311583702 0.233979526796883 0.230393724937772 0.226527019176298 5 5 + 18559358 18559790 18559591 18558077 18560090 + gene protein_coding_gene TRUE TRUE AT5G45710.1|AT5G45710.2 AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-4c (AtHsfA4c) (HSFA4C) [Arabidopsis Thaliana] (GB:Q9FK72); similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to heat shock transcription factor [Phaseolus acutifolius] (GB:AAL12248.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Heat stress transcription factor A-4c (AtHsfA4c) (HSFA4C) [Arabidopsis Thaliana] (GB:Q9FK72); similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to heat shock transcription factor [Phaseolus acutifolius] (GB:AAL12248.1); contains domain HEAT SHOCK TRANSCRIPTION FACTOR (PTHR10015); contains domain HEAT SHOCK TRANSCRIPTION FACTOR (HSF)-RELATED (PTHR10015:SF7) 0.707585409284626 6.17093000720015 8.27419196178935e-05 0.00168340312975561 9.88076649584048 11.6280381590949 0.707585409284626 0.134638012915289 AT5G49840_at 7.79642060416337 7.78191628088143 9.0534033205199 9.01185962342602 9.45218090241186 8.7268258167386 8.74864145053708 8.24302950746449 7.12903700655088 7.89638600090657 8.06349269547816 8.36828009472124 8.45579283998986 8.15273047985632 8.08122412529796 8.70732008044146 8.16714884494771 7.98137657706118 7.91216911836561 0.177130383103515 0.18375284684758 0.199989153836593 0.183432133281466 0.191759453705123 0.195629447920438 0.182381640687767 0.181424756545862 0.200101660868684 0.183202902477454 0.182002633116767 0.176762307957708 0.185000931252532 0.195399522909591 0.185401904789288 0.183241905847963 0.195888764152024 0.188781989168266 0.183244349095812 5 5|0 +|/ 20275010 20276057 20275484.889 20272469 20276261 + gene protein_coding_gene TRUE TRUE AT5G49840.1 ATP-dependent Clp protease ATP-binding subunit ClpX, putative similar to ATP-dependent Clp protease ATP-binding subunit ClpX, putative [Arabidopsis thaliana] (TAIR:AT1G33360.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD15818.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain ClpX, ATPase regulatory subunit; (InterPro:IPR004487); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.759936065147859 6.1704102675096 8.2800878186392e-05 0.00168340312975561 9.88006177589256 16.5483020678505 0.759936065147859 0.153201736313999 AT5G54250_at 6.62458879974193 6.83383817903195 7.48051445943309 7.57893944265116 7.86290168168215 7.51313942750704 7.25722380599005 7.49008926945219 6.98396249383183 6.9269660377055 7.5827344365337 7.26758423968944 7.44249813963713 7.5566138799328 7.34121314905296 7.53929521259176 7.67531385829361 7.42968060209125 6.70700650478759 0.165673003488884 0.167697187704595 0.186247639657702 0.173460413465368 0.164507473462705 0.173290380965956 0.161786819892892 0.161152423047081 0.177606237844471 0.164640514602967 0.165521318670056 0.165032297924535 0.16240112760646 0.170124008192217 0.172067729550179 0.159457638131163 0.165404227683155 0.166036053623185 0.174282855188529 5 5 - 22042942 22043909 22043383.273 22042512 22047286 - gene protein_coding_gene TRUE TRUE AT5G54250.1|AT5G54250.2 ATCNGC4 (DEFENSE, NO DEATH 2); calmodulin binding / cation channel/ cyclic nucleotide binding member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. Identical to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic nucleotide- and calmodulin-regulated ion channel 4) (AtHLM1) (CNGC4) [Arabidopsis Thaliana] (GB:Q94AS9;GB:Q9XFS2); similar to DND1 (DEFENSE NO DEATH 1), calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G15410.1); similar to IQ calmodulin-binding re (GB:ABE84248.1); similar to cyclic nucleotide-gated ion channel 4 [Hordeum vulgare subsp. vulgare] (GB:AAY58304.1); similar to putative cyclic nucleotide and calmodulin-regulated ion channel [Oryza sativa (japonica cultivar-group)] (GB:BAD53284.1); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595) 0.582080208441928 6.17027099111356 8.28166851600345e-05 0.00168340312975561 9.87987292280354 14.5061602341043 0.582080208441928 0.083000007743459 AT5G57960_at 7.99838270522637 7.94048397669398 9.1368762274665 9.11466412114085 9.31368488391688 8.71177932518759 9.3534626604706 9.25325762553775 7.95703260713247 8.5349414915 9.10499537501578 9.17740546082338 9.08477616223962 9.11213125360988 8.92548205072195 9.49846808070073 9.27768374133803 8.91568986346237 8.4155477453022 0.161411619993223 0.156028024757486 0.150622727604878 0.152696648129042 0.150622727604878 0.158225506877833 0.150907311016513 0.151088315952783 0.188725155548938 0.162464045261712 0.158329215550711 0.150622727604878 0.15695621044741 0.155979142928172 0.155807943188133 0.152561474249042 0.160911921015399 0.161158353035844 0.155517594143852 5 5|0 -|/ 23480392 23481661 23480848 23479996 23483729 - gene protein_coding_gene TRUE TRUE AT5G57960.1 GTP-binding family protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G49730.1); similar to Small GTP-binding protein domain [Roseiflexus sp. RS-1] (GB:ZP_01357074.1); similar to Os11g0592700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068195.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) 0.633713057311599 6.16859185153085 8.300751139574e-05 0.0016864913614848 9.87759584841186 17.5726170806053 0.633713057311599 0.106140082819956 AT5G22030_at 5.83210876446614 5.89941638917586 6.75554121901001 6.70274086436134 7.16066846421839 6.4317628534282 6.99717327184784 6.50852325612758 5.97627764707544 5.14437919484924 6.45033294393844 6.41773506717994 6.73000215785174 6.59303867361277 6.40570301319502 6.57885668304552 6.786912866907 6.61864002168599 5.41090654963128 0.197292415452082 0.197292415452082 0.206094524563680 0.207565940715363 0.201892389161813 0.198939176722839 0.202583149274871 0.209731720769960 0.210369307239193 0.206547217261264 0.200115354657555 0.201786123379482 0.201594898842489 0.203080395873209 0.202277828358903 0.197943191857699 0.205293593317580 0.200721317363043 0.204551086451705 5 5|0 -|/ 7290189 7291104 7290733.2 7289706 7293597 - gene protein_coding_gene TRUE TRUE AT5G22030.1|AT5G22030.2 ubiquitin-specific protease 8, putative (UBP8) similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10570.1); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.1); similar to Os12g0621000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067298.1); similar to PREDICTED: ubiquitin specific protease, proto-oncogene isoform 8 [Pan troglodytes] (GB:XP_001163445.1); similar to PREDICTED: ubiquitin specific protease, proto-oncogene isoform 4 [Pan troglodytes] (GB:XP_001163293.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.757752238879265 6.16724036018773 8.31614442054908e-05 0.00168882747527641 9.87576278807755 12.5775787898023 0.757752238879265 0.152582839886180 AT5G65880_at 4.90164296353232 5.55740310273616 5.46735992641481 5.90206319165281 5.41468555663859 5.31654605953452 5.26500735918691 5.7067690991715 4.80287763149919 4.97063018092855 6.26449055291545 6.2823605974882 6.00585135900967 6.4381591443043 6.56065585408403 6.27239429279617 5.97021542251033 6.0143890144772 4.78526215701962 0.161268387042706 0.160302580990899 0.166810684242133 0.163126249714185 0.154904196183248 0.157955242486735 0.160490518793528 0.154943080508719 0.169831696656816 0.164145604294835 0.153777892082899 0.168177356450251 0.156875185973704 0.159254849222554 0.167714845569433 0.162668213862021 0.161852285288271 0.163830257700646 0.160917480232385 5 5|0 +|/ 26370328 26370783 26370560.667 26370221 26370987 + gene protein_coding_gene TRUE TRUE AT5G65880.1 similar to Os03g0675700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050887.1) 0.770299629476256 6.16310975828564 8.36338126472665e-05 0.00169715335487006 9.87015864778397 10.9809285837821 0.770299629476256 0.157067780576835 AT5G41700_at 12.4870380964924 12.3413176803441 12.8771752131363 12.8788173148802 13.2714659109840 13.0000359662776 12.2490455538621 12.39107057454 12.8099148928696 12.672152591584 13.4936905924721 13.0538657763711 13.4384182171676 13.3119737636977 12.8672513238886 13.2177572640264 13.0662453232071 13.2791122608089 12.8621078700781 0.0854424474975214 0.084107483576223 0.0917135723727921 0.0876991430393937 0.0866556282812899 0.093878686317333 0.083076519488121 0.0824758591493415 0.0874731280120544 0.0820504661609449 0.0834722980153322 0.0820504661609449 0.0857824779676626 0.082069899001183 0.0842012089623475 0.0820504661609449 0.0911863535520034 0.08551763802941 0.0832352888401632 5 5|0 +|/ 16693329 16694408 16694046.5 16693006 16694737 + gene protein_coding_gene TRUE TRUE AT5G41700.1|AT5G41700.2|AT5G41700.3|AT5G41700.4 UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin-protein ligase One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 Identical to Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC 6.3.2.19) (Ubiquitin- protein ligase 8) (Ubiquitin carrier protein 8) (UBCAT4A) (UBC8) [Arabidopsis Thaliana] (GB:P35131;GB:Q42308;GB:Q43276;GB:Q8LE19); similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to ubiquitin carrier-like protein [Arachis hypogaea] (GB:ABI84263.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608)|Identical to Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC 6.3.2.19) (Ubiquitin- protein ligase 8) (Ubiquitin carrier protein 8) (UBCAT4A) (UBC8) [Arabidopsis Thaliana] (GB:P35131;GB:Q42308;GB:Q43276;GB:Q8LE19); similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to UBC10 (ubiquitin-conjugating enzyme 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to ubiquitin conjugating enzyme E2 [Solanum lycopersicum] (GB:CAA51821.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.537201577685457 6.16297113439319 8.36497152148024e-05 0.00169715335487006 9.86997052705338 25.685711338839 0.537201577685457 0.0587067274584160 AT5G14850_at 5.32576751383964 4.98412388844998 5.72632026356121 5.28375596121415 5.9782898356667 5.84868424950513 4.81716424681908 4.65827887950540 4.91947712065409 4.96619703587285 5.37781623434331 5.5508483138173 5.2821858001796 5.66647728082284 5.41245732320694 5.48666755810737 5.13528620304113 5.30044488019701 4.85325496898445 0.1844264558462 0.185276794294167 0.189459213295627 0.186446216296638 0.186914116584210 0.192430136508070 0.184007735572360 0.185803319089377 0.195478830808174 0.193605509147012 0.182608010457699 0.186284487855658 0.191429280575823 0.181427479201053 0.186454610722496 0.190431158554668 0.187094720017999 0.19956671483339 0.181427479201053 5 5 - 4802103 4802887 4802468.727 4801900 4804993 - gene protein_coding_gene TRUE TRUE AT5G14850.1|AT5G14850.2 mannosyltransferase, putative similar to sugar binding / transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G16900.1); similar to Os02g0111400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045653.1); similar to Phosphatidylinositol glycan anchor biosynthesis, class B [Homo sapiens] (GB:AAH17711.1); similar to Os01g0580100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043404.1); contains InterPro domain Alg9-like mannosyltransferase; (InterPro:IPR005599) 0.625737759688624 6.16261269523378 8.36908494329262e-05 0.00169719372475616 9.86948409072848 10.4850477670126 0.625737759688624 0.103054843667859 AT5G18630_at 9.183176836 9.13362922085183 9.88086524693214 9.79677013355584 10.4293729781583 10.1241974618334 9.5263635779651 9.49022315650716 9.77544521653297 9.74528487765405 10.3322211861931 9.89456958591332 10.0902746121067 10.1028911953926 9.7671533071721 10.3449924943097 9.83833144289548 10.1778431885468 9.66574538507844 0.127222971547114 0.126447022014509 0.131292961784265 0.129924649249724 0.129586162145117 0.133765898164729 0.127011965867182 0.130192430710054 0.145220864945322 0.134418045766647 0.126447022014509 0.126447022014509 0.133120858524808 0.138739271550308 0.128038984256448 0.126447022014509 0.147069078503851 0.1370186854595 0.131576041375585 5 5|0 +|/ 6204414 6205426 6204935.7 6202611 6205739 + gene protein_coding_gene TRUE TRUE AT5G18630.1|AT5G18630.2|AT5G18630.3 lipase class 3 family protein similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to triacylglycerol lipase [Triticum aestivum] (GB:CAD32696.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to Os05g0372400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055362.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.53208136204999 6.15542757754034 8.451999678134e-05 0.00171320695833307 9.85972911372034 19.5942547196362 0.53208136204999 0.0557991088594447 AT5G08280_at 10.6713826538178 10.4014414558349 10.7262620680432 10.5592937045997 10.9446156913840 10.630270647118 10.6795379862999 10.1113226706944 10.4837107936477 10.2909728065550 11.4525924764350 11.8664885359586 11.1253571777935 11.2127249366957 12.0915809829145 11.2562316089685 10.8746586728761 11.3342784513826 10.0975595069681 0.0898214143901012 0.0887439585935757 0.089052014898247 0.0891806557059273 0.0905300890762325 0.0923361870980527 0.0907487113538304 0.0903079490469495 0.101052075806603 0.0973432419238836 0.0894968817672016 0.0897348314217034 0.0870756871410033 0.0912501681791106 0.0900541227127872 0.0911115254505962 0.093048211530591 0.0938631034865834 0.096101712250591 5 5 - 2663784 2664644 2664267.909 2663500 2665793 - gene protein_coding_gene TRUE TRUE AT5G08280.1 HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Identical to Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (HEMC) [Arabidopsis Thaliana] (GB:Q43316); similar to porphobilinogen deaminase [Medicago truncatula] (GB:ABE91027.1); contains InterPro domain Porphobilinogen deaminase; (InterPro:IPR000860) 0.680090369556136 6.15480371872987 8.45924029395628e-05 0.00171387336987871 9.85888175590673 21.4367592636081 0.680090369556136 0.125082509953648 AT5G58200_at 9.4012941298754 8.9687380620047 10.1210655191667 9.6816875348146 10.3169000498697 10.0184146243315 8.97592368432542 8.45786257419411 9.33346133777136 9.32351768340705 9.86088901283257 9.75870738157108 9.89313156968396 9.6839890574497 9.53132651572939 9.97439073755634 9.77775959075902 9.74838428257839 9.46246469875476 0.102500229900214 0.10426832843905 0.0980442586218912 0.104378497998204 0.110805434104325 0.0980442586218912 0.104717258270702 0.108750067857156 0.110532359834655 0.101605539665983 0.102093239235303 0.0990188764216173 0.102350511722104 0.108872850264995 0.106525073933295 0.102486967413242 0.100047273726653 0.102858966973699 0.102384326769927 5 5|0 +|/ 23568076 23569046 23568589.7 23566860 23569278 + gene protein_coding_gene TRUE TRUE AT5G58200.1 similar to Metallophosphoesterase [Crocosphaera watsonii WH 8501] (GB:ZP_00514094.1); similar to Os06g0182400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056984.1); contains domain Metallo-dependent phosphatases (SSF56300) 0.744493340660694 6.15174284126536 8.49486180971134e-05 0.00172020409830670 9.85472346138813 19.068595859905 0.744493340660694 0.148629540010333 AT5G12250_at 9.15706932820328 9.31404652007457 9.15476859324446 9.44840726795884 9.72969357348705 9.51772243995575 9.29177216949225 9.63888843724129 9.48408709649493 9.6398657481056 10.8743036874516 10.9603143359224 10.5334597343575 10.8357824884871 10.960175539171 10.5800533874392 10.2711990070566 10.7459705423576 9.79033207587236 0.109355864688488 0.112895284929743 0.112988525434382 0.109141598897229 0.113491455680201 0.116080969729657 0.108081894816479 0.115185696106180 0.123568816786442 0.123944216851012 0.112487842616922 0.112347348613877 0.109828940434911 0.112506650644864 0.112417605687376 0.111966747251167 0.116429653650944 0.111398889936261 0.108307148239714 5 5 - 3961366 3961892 3961587.909 3961107 3963523 - gene protein_coding_gene TRUE TRUE AT5G12250.1 TUB6 (BETA-6 TUBULIN) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment. Identical to Tubulin beta-6 chain (Beta-6 tubulin) (TUBB6) [Arabidopsis Thaliana] (GB:P29514); similar to TUB3 (Tubulin beta-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to TUB8 (tubulin beta-8) [Arabidopsis thaliana] (TAIR:AT5G23860.1); similar to tubulin B4 [Glycine max] (GB:AAX86048.1); similar to beta tubulin [Setaria viridis] (GB:CAE52516.1); similar to beta-tubulin R1623 - rice (GB:JC2510); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) 0.597133110849053 6.15143766250841 8.49842218386838e-05 0.00172020409830670 9.85430878940844 19.5856721980929 0.597133110849053 0.0909627357694633 AT5G55310_at 8.81226795632948 8.87594789848337 9.62422282778986 9.5847984821078 9.80762410608637 9.4247322981504 8.90925597900147 8.68911101037752 8.7246488691688 8.8725882632221 9.21860969349675 9.22774232385963 9.16529306313483 9.30218625542164 8.95923314014597 9.31818691745972 8.91967505966818 9.13557615115562 8.82682194984012 0.153127805213615 0.135638012791061 0.150444829242433 0.135077778887145 0.139072781328616 0.154852347292911 0.139021563669176 0.14062511471851 0.155209881425180 0.141120242489448 0.139518771372952 0.137645577158865 0.140154925303201 0.140002995646382 0.139355626340568 0.135077778887145 0.163153946180685 0.14602292961338 0.140333335160206 5 5 - 22447621 22448567 22448033.727 22447402 22452302 - gene protein_coding_gene TRUE TRUE AT5G55310.1 TOP1alpha (TOPOISOMERASE I) Encodes one of two Arabidopsis topoisomerase I genes. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. similar to TOP1BETA (DNA TOPOISOMERASE 1 BETA), DNA topoisomerase type I [Arabidopsis thaliana] (TAIR:AT5G55300.1); similar to DNA topoisomerase I [Daucus carota] (GB:CAB46363.1); similar to topoisomerase I [Pisum sativum] (GB:CAA74890.1); similar to topoisomerase I [Nicotiana tabacum] (GB:AAD08711.1); contains InterPro domain DNA topoisomerase I, DNA binding, eukaryotic-type; (InterPro:IPR008336); contains InterPro domain DNA topoisomerase I, C-terminal, eukaryotic-type; (InterPro:IPR013499); contains InterPro domain DNA breaking-rejoining enzyme, catalytic core; (InterPro:IPR011010); contains InterPro domain DNA topoisomerase I, catalytic core, eukaryotic-type; (InterPro:IPR013500); contains InterPro domain DNA topoisomerase I, C-terminal; (InterPro:IPR001631) 0.568245924475719 6.13934302416938 8.64081983359749e-05 0.00174754818819248 9.83786348387634 18.1979113296007 0.568245924475719 0.0775237298245802 AT5G05370_at 8.52135723661599 8.56915766543186 9.00974098862875 9.11160636874173 9.0440042568906 8.53157779991754 8.2879407612684 8.3719445243405 8.25505124073808 7.99958977557863 9.09509183749819 9.24711119616551 8.63445613516413 8.7555946700113 9.0063859552169 8.78537720670763 8.31798451652166 8.48218166204133 7.98821623252644 0.122472025168499 0.114191667582571 0.117051855210245 0.112831798548452 0.110603916993188 0.117886140644354 0.114115368203739 0.116493713139115 0.121682633884677 0.116560584533410 0.111125195583716 0.114933581526203 0.115614700658068 0.112550519391058 0.113309151719900 0.115344453836507 0.129357504128994 0.112835629830924 0.111891296467742 5 5|0 -|/ 1590978 1591820 1591614.4 1590798 1591904 - gene protein_coding_gene TRUE TRUE AT5G05370.1 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative similar to ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative [Arabidopsis thaliana] (TAIR:AT3G10860.1); similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) (GB:P46269); contains domain Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (SSF81508) 0.598101393882628 6.13927962974269 8.641572915733e-05 0.00174754818819248 9.83777722717325 17.1166538570779 0.598101393882628 0.0919470783134113 AT5G27270_at 6.55247108073194 6.14038594039691 7.51894391574165 7.35746227837051 7.90627990881977 7.03929591358679 6.93362327073519 5.85323784814656 5.68549874874891 6.4838945547022 7.28582306166188 7.42633885823523 7.27281897213746 6.83848638460739 7.2146552407202 7.81256140655713 7.30189892814179 6.81023771650299 6.42142539603127 0.176718887648059 0.178711133756025 0.185529921952834 0.175919172990613 0.182246593317285 0.180836759575306 0.174306468895260 0.176114598205031 0.194590513589245 0.178042496919165 0.174563727950762 0.177966599771208 0.182530478694972 0.187643922171809 0.174562968698024 0.174088140288524 0.194801515631424 0.190544396714813 0.174088140288524 5 0|5 /|+ 9609179 9609487 9609352.7 9605653 9609790 + gene protein_coding_gene TRUE TRUE AT5G27270.1 pentatricopeptide (PPR) repeat-containing protein similar to PGR3 (PROTON GRADIENT REGULATION 3), binding [Arabidopsis thaliana] (TAIR:AT4G31850.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67773.1); similar to Os06g0111300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056584.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.06698948685171 6.13601285733886 8.68047525874523e-05 0.00175384926313345 9.83333152034472 13.6338585883485 1.06698948685171 0.251661253915591 AT5G28150_at 5.32563617667504 5.84884358488139 5.76197079504265 6.30654702735154 6.31253060660757 6.13654608128896 6.24672968310862 6.47188686231856 5.79240560704771 5.62184554088186 7.07313081287148 7.45771366619892 6.64587544931196 6.90987977378914 6.85245119382404 7.25159976505687 6.57450048410432 6.9016380595529 5.62369493023476 0.206197662153689 0.208857864324899 0.223454173278112 0.219341332470578 0.20392429894709 0.205467048586928 0.208046667364176 0.210333521483312 0.222087175855256 0.224377850303698 0.211179283791007 0.211045495354128 0.209912272432922 0.20392429894709 0.213715141840009 0.211443055299155 0.219349636214779 0.22645827168968 0.209255884351193 5 5 + 10136129 10136661 10136468.182 10135438 10136981 + gene protein_coding_gene TRUE TRUE AT5G28150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04860.1); similar to Os07g0572300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060057.1); similar to Os03g0806700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051637.1); similar to Protein of unknown function DUF868, plant [Medicago truncatula] (GB:ABE92686.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) 0.717578921013688 6.13598382959833 8.6808217753131e-05 0.00175384926313345 9.83329200966485 12.3701683571477 0.717578921013688 0.139732995880949 AT5G17530_at 7.57218595787369 7.60030267237726 8.21707656678543 8.25947404218151 8.78214374759667 8.38136763740312 8.23391758594237 7.78617006526617 7.79801231546852 7.83369313282312 8.27344755841106 8.40472200594991 8.28616580079835 8.55245980154368 8.14980889084804 8.3314295018605 8.28306574929506 8.62237562992972 7.542428964049 0.134839447855365 0.133966360171019 0.13291590077458 0.135210910083250 0.134400422002378 0.135974383634847 0.139171708123492 0.134347421421899 0.156648024542789 0.132029461020171 0.137941180594435 0.134152287477736 0.137952247970290 0.139607754879630 0.142075842705557 0.133790739697051 0.14531361562542 0.144228763661355 0.134495872289646 5 0|5 /|+ 5781090 5781815 5781411.429 5777605 5782152 + gene protein_coding_gene TRUE TRUE AT5G17530.1|AT5G17530.2 phosphoglucosamine mutase family protein similar to phosphoglucomutase, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70820.1); similar to Os07g0447800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059541.1); similar to Phosphoglucomutase/phosphomannomutase C terminal:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III [Crocosphaera watsonii WH 8501] (GB:ZP_00515726.1); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; (InterPro:IPR005845); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; (InterPro:IPR005846); contains InterPro domain Phosphoglucomutase/phosphomannomutase; (InterPro:IPR005841) 0.625047162338066 6.12541010675863 8.808036180672e-05 0.00177872245551887 9.81889128439231 16.1479027034832 0.625047162338066 0.104363215724128 AT5G38850_at 3.83155104066230 3.89084709993891 5.13635398453749 4.66023389636105 5.85280338988863 5.49324494028276 3.76142618045564 3.40330491587115 4.37852911734774 3.87654031034016 3.6146960356773 3.56988710555999 4.05101932001958 4.23646659404013 3.56930064313240 4.26195789372663 3.92753287618999 3.51391647811307 3.97286750807372 0.215694465832855 0.229561175636831 0.228197337212178 0.215552350984802 0.221799921577975 0.239267391952585 0.225401318684583 0.214150314036563 0.228868269714275 0.217150124425291 0.217764361686088 0.214150314036563 0.217739468824292 0.217270018374361 0.218923177969524 0.214496218297347 0.228443288653008 0.219877313170925 0.227752992162275 5 5 + 15575076 15575557 15575270.364 15572386 15575962 + gene protein_coding_gene TRUE TRUE AT5G38850.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G16870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G58120.1); similar to RLM1 (RESISTANCE TO LEPTOSPHAERIA MACULANS 1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G64070.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.665497441627834 6.12200093211523 8.8494772110263e-05 0.00178625920804411 9.81424461181042 8.46325872944704 0.665497441627834 0.120858517686323 AT5G02690_at 3.42484731896878 2.93158807826206 4.18661406640263 4.29044865155939 4.53732978591406 3.63287905944264 3.17876085447419 2.79564267502863 3.0165713989223 3.18203149948586 4.11865333275355 4.11183261930796 3.91257592235687 3.72216174105118 3.64301286711719 4.27941475806059 3.56868723388457 3.64968836016799 3.4608061505704 0.232291720558976 0.236265822708183 0.238339236438838 0.232591788894172 0.235146580999690 0.24091603191617 0.231472287533683 0.232120243061329 0.247868145151291 0.237109344080688 0.237926455849953 0.233921882293052 0.234417949275061 0.242061036581526 0.235801291103956 0.23790082957008 0.237523228196415 0.245913144080014 0.236253891461441 5 5|0 +|/ 607365 607410 607380.778 607358 607608 + gene protein_coding_gene TRUE TRUE AT5G02690.1 unknown protein 0.867529248578782 6.11987126220114 8.87547087729233e-05 0.00179067236041553 9.81134100149488 7.17004199658839 0.867529248578782 0.191058693738777 AT5G65010_at 8.5583395868926 8.67459181279537 9.25192761560297 9.32452058182308 10.1840564829156 10.0825908762548 10.4631442661325 10.6700968865104 9.51457886447605 10.3966577106834 11.5432337202902 11.5004407170563 10.6901236743525 10.8719556432205 10.9187243411812 10.7574965245150 10.4091742113672 11.0988064798521 10.2752995852775 0.120608339227912 0.114087201971927 0.112788592563918 0.112079986515727 0.110496998393264 0.110496998393264 0.110496998393264 0.113238823860534 0.118921739954435 0.110496998393264 0.111610838234929 0.110496998393264 0.112033659654370 0.117784991180857 0.110496998393264 0.110496998393264 0.115974008010741 0.11285043533193 0.112197341295961 5 5|0 +|/ 25988648 25989467 25989021.25 25986415 25989801 + gene protein_coding_gene TRUE TRUE AT5G65010.1|AT5G65010.2 ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) Encodes asparagine synthetase (ASN2). similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.1); similar to aspara (GB:CAJ43590.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Asparagine synthase, glutamine-hydrolyzing; (InterPro:IPR006426); contains InterPro domain Asparagine synthase; (InterPro:IPR001962) 0.515398222450057 6.11272605628089 8.96328087049571e-05 0.00180737318130984 9.80159416207177 20.1691200806784 0.515398222450057 0.0464060771507816 AT5G52770_at 2.14763079246536 2.08341009874550 2.67576603552944 2.57987995909341 2.53006679854743 2.70767057329732 1.66740389197649 1.80267883601929 1.93763625826687 2.23322583048080 1.96267060452627 2.15595129487620 2.40524980248045 2.14674012044084 2.25678882865430 1.91358867812041 2.31916763493722 2.23862580429594 1.37723799020612 0.178885304079368 0.178030691466094 0.180216395848119 0.188328474995128 0.18128585384189 0.177595725544963 0.173680989194730 0.173857241583694 0.190435933237906 0.182643223399023 0.176751101864436 0.17935395878543 0.173680989194730 0.175928335534736 0.173680989194730 0.176184555452492 0.177158075222393 0.183280718177132 0.180465435773453 5 5|0 +|/ 21407003 21407377 21407205.9 21406992 21407415 + gene protein_coding_gene TRUE TRUE AT5G52770.1 heavy-metal-associated protein-related similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.511773044936049 6.11245860760369 8.96658565922586e-05 0.00180737318130984 9.80122918321046 4.2864206427223 0.511773044936049 0.0434917903275687 AT5G49960_at 4.82935063261107 4.62575528482976 5.15501980715996 4.57548221967347 5.58324861664499 5.25956373129367 4.92695671087890 4.50969013674182 5.18276075586424 4.87907166603856 6.58564860427607 6.51850218307681 5.79231889809276 6.00596808233193 6.04397053620369 5.81322827588775 5.60768754887996 6.21595931506342 5.12756919238092 0.237328886092673 0.231882428220872 0.233116915402106 0.245110950424311 0.231882428220872 0.239642404742286 0.233875897714108 0.235569022739669 0.243809816304048 0.233677643322941 0.231882428220872 0.237794979611083 0.238592839884911 0.234006326935566 0.242755370399779 0.231882428220872 0.23838784161196 0.238354849145259 0.231882428220872 5 5|0 -|/ 20341420 20342136 20341740.2 20341399 20344913 - gene protein_coding_gene TRUE TRUE AT5G49960.1 Identical to Putative ion channel DMI1 [Arabidopsis Thaliana] (GB:Q9LTX4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to Putative ion channel DMI-1 (Does not make infections protein 1) (GB:Q6RHR6); similar to Putative ion channel POLLUX, chloroplast precursor (GB:Q5H8A5); similar to putative DMI1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81711.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) 0.715083480738137 6.10398635045867 9.07195348038213e-05 0.00182776219375870 9.78966176465864 10.5011555434314 0.715083480738137 0.140184765245057 AT5G20300_at 7.8169776834676 7.82872636378084 8.28353828478868 8.18437060446 8.62487520534751 8.31297571895965 7.62611313709567 7.16011216048608 7.9686997137035 7.69523316318005 8.45158464939209 8.54315865020328 8.02839003651554 8.34650493606246 8.11814785019628 8.50009863765358 8.25242314514736 7.51876844390893 7.57902087702181 0.176348501862283 0.176741043007613 0.184828314758163 0.178829592228236 0.176520097627183 0.176077094131981 0.182731235213443 0.175629076049007 0.186310436639812 0.183107793539826 0.179727952719356 0.174545111130640 0.180667627784226 0.187694552475966 0.175545230313487 0.178398985889939 0.177058141749922 0.186161967354111 0.186934410731888 5 5 - 6853546 6854095 6853835.364 6853418 6856979 - gene protein_coding_gene TRUE TRUE AT5G20300.1|AT5G20300.2|AT5G20300.3 chloroplast outer membrane protein, putative|GTP binding similar to ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120), GTP binding / protein translocase [Arabidopsis thaliana] (TAIR:AT3G16620.1); similar to AIG1 [Medicago truncatula] (GB:ABE78362.1); similar to Os12g0197400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066359.1); similar to AIG1 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96654.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917)|similar to ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120), GTP binding / protein translocase [Arabidopsis thaliana] (TAIR:AT3G16620.1); similar to AIG1 [Medicago truncatula] (GB:ABE78362.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917) 0.607845454757284 6.08825562334848 9.27112728748047e-05 0.00186702294931698 9.76815537176702 15.9634790422666 0.607845454757284 0.0985668170608047 AT5G37850_at 9.01587149319392 9.10081345500163 9.70751214716462 9.47446277977816 9.94613074482905 9.44234497466945 9.03881429019809 8.81781118079247 8.41745141574206 8.48479171352803 9.13902249889419 9.24537116771425 9.05911657833187 9.10110824955163 8.83963165266143 9.1461742652527 9.10590986871627 8.87999061471538 8.51149175841271 0.156217722399084 0.155080126361256 0.152433470389692 0.162100165942145 0.151406600581017 0.154655813832659 0.151588296975788 0.150859947800347 0.164002064489959 0.159730569591491 0.152711336974433 0.147361601260675 0.15086799071339 0.161099403891177 0.155132866911421 0.147782412870806 0.158680686951099 0.161060511494208 0.153456988559651 5 5|0 +|/ 15084394 15085966 15085352.25 15082604 15086229 + gene protein_coding_gene TRUE TRUE AT5G37850.1|AT5G37850.2 SOS4 (SALT OVERLY SENSITIVE 4); kinase|SOS4 (SALT OVERLY SENSITIVE 4) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+. Identical to Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase) (Pyridoxal kinase- like protein SOS4) (Salt overly sensitive 4) (PK) [Arabidopsis Thaliana] (GB:Q8W1X2;GB:Q94EN4;GB:Q9FKE1); similar to TH1 (THIAMINE REQUIRING 1), phosphomethylpyrimidine kinase/ thiamin-phosphate diphosphorylase [Arabidopsis thaliana] (TAIR:AT1G22940.1); similar to Pyridoxal kinase [Medicago truncatula] (GB:ABE83533.1); contains InterPro domain Pyridoxal kinase; (InterPro:IPR004625); contains InterPro domain Phosphomethylpyrimidine kinase type-1; (InterPro:IPR013749) 0.62129035311629 6.0869982237229 9.28724870955357e-05 0.00186940120971035 9.76643469240413 18.0858629204737 0.62129035311629 0.104432377475337 AT5G08139_at 6.60517590454953 6.93020791496326 7.5050401836745 7.63533489018483 7.8707422969959 7.35024176396909 6.60436422069498 6.8631555946979 6.3973498754806 6.58340616082425 6.96928109911794 6.73814718532514 7.00733912333993 6.93823776392139 6.76076057282288 7.15457738974333 6.73179112367744 6.99021852156044 6.35592603254187 0.166588451993262 0.166253292746240 0.164354643964904 0.168533452679465 0.17267232078048 0.174353667669201 0.171224136162777 0.162131227522091 0.174618642335037 0.173510203004042 0.177245662599926 0.172945167730383 0.166170731059897 0.173751214333962 0.167589257177980 0.163259222665885 0.186240868258565 0.16466074710567 0.180284323825719 5 5 + 2617034 2617529 2617309.636 2616346 2617879 + gene protein_coding_gene TRUE TRUE AT5G08139.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G60820.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.652673641401326 6.08389693703976 9.3271395377581e-05 0.00187655951205638 9.76218973678098 13.8489602397433 0.652673641401326 0.117437233152236 AT5G55050_at 4.85020781390257 5.34793291191401 6.65390114333331 6.79379399593724 5.95191418074743 5.16022447274418 5.99329176928613 6.40699753640256 4.2634849438331 4.26341548844251 5.01036541300765 4.75191524523028 5.98327833773521 5.80614275604325 4.91152467385101 6.34183211665092 5.64277124236 5.18427735015559 4.36271566847349 0.226417951672575 0.224189611332573 0.229906124740227 0.237160394926769 0.224907821619336 0.243284230970849 0.231548954627431 0.228473231063822 0.232340136540626 0.226168707548033 0.225079409392764 0.221250317467342 0.230173090219144 0.221250317467342 0.225198909719128 0.223552290546097 0.226698658029655 0.22520111452175 0.232935867101546 5 5|0 +|/ 22356158 22356942 22356584.9 22354927 22357326 + gene protein_coding_gene TRUE TRUE AT5G55050.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G50400.1); similar to putative GDSL-like lipase/acylhydrolase [Oryza sativa (japonica cultivar-group)] (GB:AAP05801.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.823912815971881 6.08140704524401 9.35929899793367e-05 0.00188166661336237 9.75878058849047 10.7700590240979 0.823912815971881 0.178609293377230 AT5G47320_at 7.41152972570474 7.85298964042258 8.32631906860782 8.57785118691495 8.50923060199462 7.79046011917324 7.61253441598996 7.90343846525635 7.36045171903738 7.27073928644596 8.27124499196467 8.48055640933634 7.83654705692082 8.37704521768618 8.3686970038911 8.2612848442551 7.62358351209303 7.6748358163857 6.90257160778453 0.198503457808868 0.195841071166822 0.197694463645749 0.20195041066983 0.195567756981287 0.220177163989411 0.192888341547245 0.197647152843018 0.214504011665466 0.203722530883033 0.198248613896734 0.194987662482184 0.194679838351759 0.204388999667665 0.194702562880931 0.192237442408319 0.199691281427556 0.202785502033822 0.202951974103148 5 5 + 19221076 19222072 19221641.455 19220378 19222499 + gene protein_coding_gene TRUE TRUE AT5G47320.1 RPS19 (40S ribosomal protein S19); RNA binding Nuclear encoded mitochondrial ribosome subunit. Identical to 40S ribosomal protein S19, mitochondrial precursor (RPS19) [Arabidopsis Thaliana] (GB:P39697;GB:Q41991;GB:Q94AL0;GB:Q9LVS7); similar to GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4), RNA binding [Arabidopsis thaliana] (TAIR:AT3G23830.2); similar to glycine-rich RNA-binding protein PsGRBP [Pisum sativum] (GB:AAB71417.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Ribosomal protein S19, bacterial and organelle form; (InterPro:IPR005732); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.769822833903288 6.08125988715473 9.36120340591664e-05 0.00188166661336237 9.75857907095883 15.642866766836 0.769822833903288 0.160429367818529 AT5G41150_at 3.48255682689953 3.73930553475298 4.49886704839142 4.52454581160669 5.92646239472864 4.96111139409524 4.18152231213203 3.76732115910028 4.41788295376727 3.92695660713779 5.11114342336298 4.86554456859797 4.84113898365211 4.89310879059989 4.51042607743914 5.12721382973408 4.08999987798717 4.76070178741785 4.43664645847742 0.238983287671006 0.235944980574311 0.240261617520198 0.23639915445770 0.238274332304434 0.239450815659997 0.239626659713345 0.235944980574311 0.244058007403886 0.237832829573904 0.240926352970409 0.240326243629878 0.244710392181684 0.250709113050562 0.240939552551919 0.241386342387536 0.246667565793886 0.239190284659763 0.235944980574311 5 5 - 16490291 16490990 16490635.545 16489992 16494241 - gene protein_coding_gene TRUE TRUE AT5G41150.1|AT5G41150.2 UVH1 (ULTRAVIOLET HYPERSENSITIVE 1) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins Identical to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) (UVH1) [Arabidopsis Thaliana] (GB:Q9LKI5;GB:Q9SE36;GB:Q9SPL7); similar to Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4 (ISS) [Ostreococcus tauri] (GB:CAL54856.1); similar to Os03g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048645.1); contains InterPro domain RuvA domain 2-like; (InterPro:IPR010994); contains InterPro domain ERCC4; (InterPro:IPR006166)|Identical to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) (UVH1) [Arabidopsis Thaliana] (GB:Q9LKI5;GB:Q9SE36;GB:Q9SPL7); similar to Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4 (ISS) [Ostreococcus tauri] (GB:CAL54856.1); similar to Os03g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048645.1); contains domain DNA REPAIR ENDONUCLEASE XP-F / MEI-9 / RAD1 (PTHR10150) 0.849742265769516 6.07863264259337 9.39527314065567e-05 0.00188763974288614 9.75498078425125 8.90291406378488 0.849742265769516 0.187190794669158 AT5G60980_at 6.52197901640332 6.04750020720842 6.51606315473886 6.42387391508744 6.01708364534196 6.48186188603453 4.77316354877271 5.74336016575721 5.85825403386133 5.92956321565211 7.74626329810512 7.34751084440669 6.75365972031452 7.30414113262803 7.47831700640202 6.8899124273809 6.61153952531324 6.90518953590272 5.95244641907444 0.228608168874885 0.222253766415372 0.230644147675985 0.226302706982955 0.232465452308908 0.246548122429969 0.244762997554162 0.231230224516817 0.239380776218509 0.239773998197221 0.231070944756058 0.229725109962243 0.222342636776813 0.223263377015715 0.225930290336738 0.223580594860491 0.234011719616483 0.228698073411902 0.228444870394087 5 5|0 +|/ 24562293 24563220 24562722.556 24560586 24563495 + gene protein_coding_gene TRUE TRUE AT5G60980.1|AT5G60980.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to Os04g0372800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052571.1); similar to OSIGBa0140A01.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66639.1); similar to putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD23032.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.902182689604655 6.07665171454836 9.42104933696945e-05 0.00189111107004747 9.75226700500397 12.5871046470027 0.902182689604655 0.204096629844223 AT5G07110_at 2.38044827052795 2.6221747066893 2.04782021377939 2.00899595791439 2.72239271212544 2.69031656362033 3.08308503079769 3.28063459155334 3.51540033294835 2.92925311938411 5.61495847762056 5.31452403635847 4.89166948609928 5.06439282657704 5.3503606015878 3.99000813398041 3.48345283927082 5.20134628646298 3.58212531236238 0.256884988628341 0.242338369030937 0.246412124269561 0.249382347220395 0.257426979048124 0.250551182374646 0.242338369030937 0.242338369030937 0.25008861996006 0.242338369030937 0.242338369030937 0.246187727685934 0.246190581802601 0.256551919638816 0.24774881320387 0.242338369030937 0.242374080430426 0.242338369030937 0.246240915828749 5 5 + 2206338 2206746 2206542.818 2206001 2206929 + gene protein_coding_gene TRUE TRUE AT5G07110.1 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT5G05380.1); similar to prenylated Rab acceptor protein 1 [Oryza sativa (indica cultivar-group)] (GB:AAV65110.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) 0.523687604865436 6.07663445611374 9.42127423936812e-05 0.00189111107004747 9.75224335914194 6.70753284298912 0.523687604865436 0.0547229661654938 AT5G41060_at 1.77591558609807 1.7168006305913 1.51824997110835 1.64813665316978 2.27035878065222 2.22997077898861 2.49823371492682 2.42941217361835 2.48254065785366 2.30313639443830 3.69120094407934 4.9172761204868 3.19535287959063 2.97540001106237 4.59228205884467 2.92632303435632 3.04416072559911 3.65061551475377 2.56119994830458 0.238002313287499 0.237711424331789 0.237665651071089 0.237868537703223 0.235285935095310 0.244749134686478 0.243213271694232 0.235492457544588 0.242680020801858 0.238581269110121 0.235285935095310 0.2370932793137 0.235476255356759 0.24460436393037 0.245837531608488 0.235285935095310 0.235285935095310 0.236017694734664 0.235963549751533 5 5 + 16454132 16454692 16454310.273 16452596 16454927 + gene protein_coding_gene TRUE TRUE AT5G41060.1|AT5G41060.2 zinc finger (DHHC type) family protein|zinc ion binding similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G26935.1); similar to Os09g0508300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063622.1); similar to Os08g0535400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062355.1); similar to P0482D04.5 [Oryza sativa (japonica cultivar-group)] (GB:BAB89658.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594)|similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G26935.1); similar to Os01g0925300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045255.1); similar to Os09g0508300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063622.1); similar to P0482D04.5 [Oryza sativa (japonica cultivar-group)] (GB:BAB89658.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 0.493352965284445 6.07383342843575 9.4578519924589e-05 0.00189757473287699 9.74840506058884 5.04740249179192 0.493352965284445 0.0282946880473414 AT5G16060_at 6.74540961563188 7.08832660032488 7.7326911691375 7.89420744860245 7.20206029311821 7.22076308225014 6.85024543196962 7.21139310654974 6.2597978550338 6.58956267527449 7.22538548770526 7.32724658270934 6.69873523168487 7.50840443464674 7.732382610978 7.18265644220746 6.9965508646768 7.07877779857651 6.8899429636957 0.167248754444713 0.167512365091091 0.178930802141063 0.166435734947884 0.173273010912671 0.167746802827830 0.168403539655598 0.169479153110597 0.180778730217458 0.180576432117184 0.168196979240982 0.168433666765613 0.174928160770956 0.170937057231394 0.168049263174893 0.172068136537628 0.178675889504454 0.177123743409064 0.167914980761864 5 5|0 +|/ 5246167 5247188 5246636.111 5246125 5247434 + gene protein_coding_gene TRUE TRUE AT5G16060.1 similar to hypothetical protein [Cleome spinosa] (GB:ABD96913.1) 0.588793204985752 6.07220220162023 9.479223728113e-05 0.00190098297044225 9.74616921396697 14.1424047249394 0.588793204985752 0.0906609920933066 AT5G53590_at 4.05577019404522 4.66076348441815 5.26433709194324 5.35393521192754 4.87162195697634 4.42745865451252 4.82572666936347 4.84336731828017 3.40085318221977 3.94626310583462 4.61091571086779 4.94259255628742 4.96163843740477 4.71490678183113 4.75918669910025 5.11646804326952 4.94661523262198 3.9328803542875 3.93035193554932 0.250084059553170 0.247585646828671 0.260033749827546 0.250943869527932 0.249908378206386 0.255729906762431 0.253417369096559 0.247585646828671 0.269100940619186 0.256764853461191 0.253136946741068 0.247585646828671 0.247585646828671 0.255716274604060 0.259173974459440 0.248678676040889 0.256457103658166 0.256004013776579 0.260517816679221 5 5 + 21789393 21789719 21789590.636 21789047 21790020 + gene protein_coding_gene TRUE TRUE AT5G53590.1 auxin-responsive family protein similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G00880.1); similar to Auxin responsive SAUR protein [Medicago truncatula] (GB:ABE93517.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.68596285736869 6.07098715048533 9.49517648925121e-05 0.00190330182676298 9.74450353819268 9.04152584843001 0.68596285736869 0.130840877902994 AT5G40500_at 8.80753624578052 8.78783602670837 9.3520650396074 9.39929466041133 9.98669084971034 9.50734338461445 9.58341219627796 9.37888163140081 8.94839119739389 9.25394941673914 10.2666452474743 10.0974061715220 9.71266856515147 9.94789171213547 9.62055329916924 9.97687933805001 9.71564057758336 9.9246930737978 9.25685560822992 0.108204635278583 0.111156002778356 0.110884765396650 0.115180981035784 0.112025829484780 0.113699282629450 0.112853131574408 0.111317347288722 0.121770976574065 0.112852437286588 0.114603482033941 0.113128448949835 0.109215575303969 0.117374439112665 0.109456039459597 0.111940359436926 0.116238723731867 0.110078323770205 0.116684966848461 5 5|0 +|/ 16245221 16245712 16245537.1 16245062 16245921 + gene protein_coding_gene TRUE TRUE AT5G40500.1|AT5G40500.2 similar to Os04g0482900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053120.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55654.1) 0.588331899600052 6.06829070864414 9.5306816512536e-05 0.00190953599462155 9.7408062715999 18.8808138320963 0.588331899600052 0.090622744508129 AT5G55670_at 5.49506100350216 4.86103517056013 5.79548894547482 5.83825635110679 6.33194808706759 6.08617839936587 4.71256602953702 5.39384920541667 5.57370611280923 5.15038770620215 5.70209684966323 5.76262347743021 5.88694518726607 6.23776960517456 6.1433822957457 6.23336538651593 5.89520207308446 5.93004622351706 5.1725447397881 0.171020206496040 0.178228301580723 0.177427757812977 0.187302741203394 0.196023477743597 0.185222481080097 0.180356046540965 0.181016343029551 0.171020206496040 0.193159779543145 0.173806697875471 0.174528279397558 0.181515419833669 0.172104075407939 0.171020206496040 0.175053341992758 0.182719220924499 0.171536998859832 0.177483567023715 5 5 - 22561895 22562445 22562146.182 22561166 22564027 - gene protein_coding_gene TRUE TRUE AT5G55670.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT1G13190.1); similar to Os08g0490300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062111.1); similar to Os09g0476100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063463.1); similar to hypothetical protein DDBDRAFT_0205004 [Dictyostelium discoideum AX4] (GB:XP_639372.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.786194730599798 6.06462151128993 9.57922402340773e-05 0.00191837528942364 9.73577342838705 11.2007021024536 0.786194730599798 0.166741317388173 AT5G64816_at 6.52555540292904 6.82063280565377 7.47473993984449 7.84998899680894 7.9187655885428 7.11029858181535 7.30052951061565 7.1320564579674 6.19821200210792 6.27317506476274 6.8045385044361 7.26075414382158 7.09298006507942 7.21323984750139 7.35342140058054 7.92287976108558 7.25011660379615 7.44870003952154 6.65428846843618 0.190867215965196 0.182631467263765 0.180443716456969 0.190833138653793 0.184116820989501 0.181315609611097 0.180215720756317 0.187871202123036 0.198370033730988 0.183514692448102 0.194267779605799 0.184103093806263 0.180115953504800 0.193098961957883 0.180981006197244 0.185709476872981 0.194280286332119 0.18875838249069 0.183534785776329 5 5 + 25930715 25931050 25930887.818 25930226 25931253 + gene protein_coding_gene TRUE TRUE AT5G64816.1|AT5G64816.2 Identical to Protein At5g64816 precursor [Arabidopsis Thaliana] (GB:Q8L8Q8;GB:Q9LV96); similar to Os03g0185600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049198.1) 0.780929174876803 6.06186116441094 9.61591706690802e-05 0.00192483452203621 9.7319858632333 14.1008478976039 0.780929174876803 0.165073159964771 AT5G46830_at 1.37360608625226 1.87684307611325 1.69300714163742 2.14012851994019 1.91152198766069 1.52221990684908 3.19961131930487 3.45945677168074 1.56979932363825 1.44593684322584 3.48826191673016 3.66170703233995 2.98019700039731 4.06540567367065 4.50403975976748 4.54386544414227 3.10609182488834 3.43568949090810 1.88364233007011 0.255798290579761 0.249807614193685 0.255275845948142 0.249807614193685 0.25210652714544 0.255571117348248 0.251355630024544 0.251436760079975 0.257512486101294 0.250190395151473 0.252381864450328 0.251472877507246 0.259672634006087 0.257900468838640 0.264594030458899 0.264131983971433 0.252103430867902 0.253497860577614 0.250719152183942 5 5 + 19020889 19021446 19021115.727 19019946 19021481 + gene protein_coding_gene TRUE TRUE AT5G46830.1 basic helix-loop-helix (bHLH) family protein similar to ATMYC2 (JASMONATE INSENSITIVE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32640.1); similar to basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] (GB:ABD65632.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.714685588947432 6.06061839049941 9.63248625812247e-05 0.00192637246803093 9.73028023442726 4.82519106792994 0.714685588947432 0.141888020581487 AT5G46080_at 4.19150788306597 4.06645449299007 5.79756250950692 4.91905129660741 6.11282445855104 4.84345047016391 3.60929898448958 2.79351964747836 3.17259958425231 2.93443493630784 3.62054993686504 3.52289531521637 3.42342318308312 3.84129246523282 3.26014174689918 3.42977033470935 4.33677545641363 3.70292779336008 2.72000425157317 0.233454495788474 0.234184172232186 0.235023274577502 0.240461315260545 0.23942137245809 0.232526517233090 0.23785083073676 0.234845854734331 0.236540821885702 0.24627419401751 0.237997264405386 0.227455314418832 0.229050458177211 0.227455314418832 0.233383784669646 0.227729976582356 0.227455314418832 0.243625279432534 0.236208695248081 5 5 - 18706987 18707525 18707304.455 18706769 18708084 - gene protein_coding_gene TRUE TRUE AT5G46080.1 protein kinase family protein similar to ACR4 (ARABIDOPSIS CRINKLY4), kinase [Arabidopsis thaliana] (TAIR:AT3G59420.1); similar to Os05g0498900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055953.1); similar to Os03g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050726.1); similar to Putative receptor protein kinase CRINKLY4 precursor (GB:O24585); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 1.22645135164800 6.05798793427106 9.6676575434856e-05 0.00193251488807284 9.72666932750672 7.83399286103177 1.22645135164800 0.302931017537975 AT5G35180_at 9.44900639788147 9.37450551373664 9.93062948274484 9.85488161064336 10.3560321738188 10.0223849303294 10.0345925458480 9.76013753847483 9.5023013499226 9.59763668222998 10.2730616065531 10.39448584433 10.2417769804852 10.2587644270226 9.98733618143948 10.1954939678012 10.1816644032065 10.2772769287423 9.3824403391114 0.10673357174516 0.105929665544059 0.107397811660151 0.107713672408655 0.105385963762651 0.111174168665356 0.106221824484107 0.103791359191718 0.119613055049895 0.109348533929659 0.106730224228164 0.103430375559986 0.115000935123110 0.104938613416211 0.105128332942897 0.103430375559986 0.107837757308502 0.108201407132666 0.109016089716611 5 5 + 13448363 13449898 13449251.182 13441648 13450248 + gene protein_coding_gene TRUE TRUE AT5G35180.1 similar to EDR2 (enhanced disease resistance 2), lipid binding [Arabidopsis thaliana] (TAIR:AT4G19040.1); similar to Os08g0439100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061897.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) 0.559263984545878 6.05329216451222 9.73078602228e-05 0.00194423757034831 9.72022069617605 19.7079506072858 0.559263984545878 0.0769916593545655 AT5G43990_at 2.11027103384725 2.25138153106675 2.57184340739983 2.52272777526266 2.30297428880740 2.78054122077067 2.64655669695759 2.68003724328285 2.37576055564155 2.81179477719397 3.69988807789049 4.50555688183788 3.08688132435873 3.22879597343895 3.90444260569039 3.52699372872959 3.09553957167567 3.86407718460082 2.54967235046535 0.221551129949172 0.217860700370609 0.223507792858000 0.223410593430942 0.22025969409975 0.220101786707332 0.219710615188786 0.221163281292257 0.217071583753704 0.220784282883053 0.224737786491652 0.221876214033357 0.223597453172617 0.226925276919259 0.222806003123397 0.218742978929479 0.219908349056221 0.225678073320132 0.216558016669421 5 5|0 +|/ 17717767 17718766 17718343.8 17715085 17719232 + gene protein_coding_gene TRUE TRUE AT5G43990.1|AT5G43990.2|AT5G43990.3|AT5G43990.4 SUVR2; histone-lysine N-methyltransferase/ zinc ion binding Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. Identical to Histone-lysine N-methyltransferase SUVR2 (EC 2.1.1.43) (Suppressor of variegation 3-9-related protein 2) (Su(var)3-9-related protein 2) (Protein SET DOMAIN GROUP 18) (SUVR2) [Arabidopsis Thaliana] (GB:Q9FNC7;GB:Q941L4); similar to SUVR1 (Arabidopsis homolog of SU(VAR)3-9 1), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G04050.1); similar to SET-related re (GB:ABE92042.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Pre-SET; (InterPro:IPR007728); contains InterPro domain Nuclear protein Zn2+-binding; (InterPro:IPR003606) 0.578703035432863 6.05232381365366 9.7438590465501e-05 0.00194595284376791 9.71889045869162 5.57984055615509 0.578703035432863 0.0867892240091344 AT5G64660_at 3.40887449441153 4.04716835179069 4.16888363151733 4.73864385621842 4.46334707843202 4.16783528038086 3.48264274320794 3.32066469837412 3.71467083253272 3.38000681208051 4.71512662882373 4.08619677291943 4.14553766337495 3.86545189558040 4.57873771214761 4.14492111539350 3.65300098115942 4.04703447099948 3.25493181983798 0.220510480693069 0.226701762020507 0.225852258135862 0.237293228170407 0.235399146055190 0.233890556769919 0.226932703964764 0.229967405836643 0.229306940030152 0.242526495655538 0.227911546263094 0.228194451990140 0.22791863338245 0.239433012363475 0.227761134420503 0.221717885978026 0.233969692908496 0.223513691320576 0.228504241866733 5 5 - 25859368 25859918 25859675.273 25859139 25860678 - gene protein_coding_gene TRUE TRUE AT5G64660.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09800.1); similar to U box [Medicago truncatula] (GB:ABE81171.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.762235486628585 6.05089595968972 9.76316981973603e-05 0.001948911709358 9.71692873595017 7.77694288005839 0.762235486628585 0.159135960655118 AT5G16150_at 10.1899947456346 10.3148326766995 10.5496782041344 10.5610062658367 10.8464109307887 10.6987424488231 9.77248120036758 9.77721546843413 10.4639628567274 10.2480243920605 10.8337209853717 10.8255560565378 10.5723143457838 10.7316298880461 10.6625126640148 10.6047553159404 10.1043365882674 10.8383270488839 10.2039558672560 0.100102558069759 0.0969796329545773 0.0989957070258815 0.0998149897219486 0.0977341530284724 0.0997175065572584 0.101329625842041 0.106498044130246 0.103020159273213 0.09999329941101 0.0969796329545773 0.0969796329545773 0.0969796329545773 0.100093501460366 0.100058845930887 0.0969796329545773 0.109348632651359 0.103112066448884 0.104084870386197 5 5|0 +|/ 5274739 5275655 5275148.778 5272560 5275818 + gene protein_coding_gene TRUE TRUE AT5G16150.1|AT5G16150.2|AT5G16150.3 GLT1/PGLCT (GLUCOSE TRANSPORTER 1); carbohydrate transporter/ sugar porter Encodes a putative plastidic glucose transporter. Identical to Plastidic glucose transporter 4 (AtpGlcT) [Arabidopsis Thaliana] (GB:Q56ZZ7;GB:Q93Z41;GB:Q9LF13;GB:Q9LLD8); similar to hexose transporter, putative [Arabidopsis thaliana] (TAIR:AT1G05030.1); similar to plastid hexose transporter [Vitis vinifera] (GB:AAU07980.1); similar to hexose transporter [Spinacia oleracea] (GB:AAF74565.1); similar to hexose transporter pGlT [Olea europaea] (GB:AAK62031.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.495829089601435 6.04848388409268 9.79588467897163e-05 0.00195454232714449 9.71361409326948 20.8147744844000 0.495829089601435 0.0335303081398660 AT5G43850_at 10.8891878717461 10.9461892121407 12.1821669251269 12.2927337694371 12.2165255208186 12.1202431208840 12.1278303785847 12.2983390304817 11.5044670867733 11.9112281488406 11.9015891319165 11.5658728782811 12.4171368811323 12.184442809123 11.6265967963052 12.3781010792237 12.2953371009975 12.1601871956687 11.6809873029583 0.0820578531285354 0.0752922888043832 0.0827420064807877 0.076500792563837 0.0745812191837686 0.078937342533364 0.0769522561069878 0.0745812191837686 0.0865058183993338 0.0752380408516252 0.0757870020641032 0.0753139547215698 0.0764035677061385 0.0773196305542029 0.0752856040072336 0.0745812191837686 0.0838469296995392 0.077742165927589 0.0746033864065086 5 0|5 /|- 17644618 17646052 17645127.875 17644409 17646386 - gene protein_coding_gene TRUE TRUE AT5G43850.1 ATARD4; acireductone dioxygenase (Fe2+-requiring)/ metal ion binding Identical to 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 (EC 1.13.-.-) (Aci-reductone dioxygenase 4) (ARD4) [Arabidopsis Thaliana] (GB:Q8H185;GB:Q8LCE2;GB:Q9FG79); similar to ATARD2, metal ion binding [Arabidopsis thaliana] (TAIR:AT4G14710.2); similar to ARD-like protein [Brassica juncea] (GB:AAR03591.1); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Acireductone dioxygenase, ARD; (InterPro:IPR004313) 0.502397257692627 6.04626831240615 9.8260378013787e-05 0.00195965686472058 9.7105687066921 23.766678060455 0.502397257692627 0.0401463251006284 AT5G03120_at 4.24534819233866 4.24428923116415 4.71484834252867 4.88433326882657 3.83736478923159 4.25130889704009 6.15656460018783 5.78001247229748 6.84404779621222 5.78141704115867 9.9213716541497 8.01821539392108 8.58295761242429 8.66789117052871 8.22660337177598 6.94608004753013 6.71747823743266 7.6115438134661 5.92450628868734 0.256990489353522 0.26075091107184 0.257901813913613 0.257978887626949 0.264794212737341 0.259721558402000 0.255362593432782 0.257495929439196 0.258495959505397 0.265023324785383 0.270534809215428 0.258760697823777 0.270368224072391 0.258499393294734 0.262106583960034 0.254482955397187 0.261728429209255 0.263889462711537 0.260754620911754 5 5|0 +|/ 734066 734350 734234.333 733978 734942 + gene protein_coding_gene TRUE TRUE AT5G03120.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78315.1) 0.609302077188603 6.04322731757423 9.86758654879503e-05 0.00196703834201155 9.7063875334101 11.8991794098717 0.609302077188603 0.101184085374040 AT5G25580_at 1.70092484747637 1.37740351003504 2.17678693214065 2.11078463687432 1.58714311468599 1.66711999220231 1.48690854860993 1.26084930064662 1.58822798468923 1.14193152779777 1.96622853496264 2.73279634132939 2.04434764942875 2.01407626063535 1.94100930899874 2.22888048426604 2.06649929701501 1.71825217226745 1.54443784921053 0.184123893775687 0.184101375069269 0.189663241147951 0.18132757462445 0.188736434957530 0.189389648620372 0.190440868838354 0.181365292290436 0.184030904116259 0.186229568759302 0.194679958821087 0.186723969168657 0.185937916500466 0.184181364683804 0.180546444566828 0.180931606466097 0.193550497063404 0.19119967415192 0.184350818533222 5 5|0 +|/ 8904971 8906086 8905564.222 8903508 8906314 + gene protein_coding_gene TRUE TRUE AT5G25580.1 similar to aminoacyl-tRNA synthetase family [Arabidopsis thaliana] (TAIR:AT1G18950.1); similar to hypothetical protein MtrDRAFT_AC130799g7v1 [Medicago truncatula] (GB:ABE83622.1); contains InterPro domain B repeat unit of collagen binding surface protein (cna); (InterPro:IPR008970) 0.546541293082118 6.04280886140468 9.87331857231985e-05 0.00196727648818481 9.70581207322686 3.42792863200662 0.546541293082118 0.0706184841722013 AT5G60020_at 2.04379506955190 1.80179509071456 2.21799141795086 2.10810911929749 1.86507428493629 1.94524902328193 1.99654055045589 1.87453708125872 2.41558976849385 2.35538124438568 3.22923061443046 3.94236416013699 2.88575800948931 3.09116648291661 4.35687247817159 2.94721641550439 3.08027813652787 3.54980731840503 2.59581653073476 0.193548012107511 0.198251992356066 0.205148244938079 0.194865882550632 0.196068501549087 0.191474370540760 0.206910255604648 0.192830188878157 0.190658259027268 0.190688404488715 0.191892082032307 0.194299572539814 0.196618257171502 0.194164432936782 0.210249425096734 0.191139640469715 0.194493286840567 0.196717437051226 0.194145347814815 5 5 + 24186780 24187425 24187102.636 24185222 24187688 + gene protein_coding_gene TRUE TRUE AT5G60020.1 LAC17 (laccase 17); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to LAC2 (laccase 2), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G29130.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17194.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17192.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17193.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.517339933723862 6.04011922085946 9.91024654314696e-05 0.00197372740896155 9.70211265059026 4.90210272959056 0.517339933723862 0.0524760823870751 AT5G53430_at 4.04957576911787 4.20132367062936 4.91913617608078 4.49690730967694 5.72388735758621 5.08358406421402 4.7757484295685 3.7594204881073 4.41203072804125 4.35770093369454 5.37225807375448 5.43831635777206 5.74343394048647 5.13927536824438 5.3377623059398 5.67974968448035 5.45990898417176 4.89031776032014 4.23758855644969 0.207857842391827 0.201941257580537 0.207942339445987 0.198988097381297 0.19903539152439 0.219074491505377 0.203388397222924 0.204560660571732 0.211959772397593 0.201199218485008 0.206287141635112 0.198772121387764 0.198954561701099 0.198772121387764 0.213440988819403 0.198772121387764 0.199931483656889 0.202042954039952 0.209779552426409 5 5|0 +|/ 21699269 21700358 21699689.7 21694372 21700720 + gene protein_coding_gene TRUE TRUE AT5G53430.1 SDG29 (SET DOMAIN GROUP 29); DNA binding Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. Identical to Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43) (Trithorax- homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) (ATX5) [Arabidopsis Thaliana] (GB:Q8GZ42;GB:Q941G9;GB:Q9LV06); similar to PHD finger protein-related / SET domain-containing protein (TX4) [Arabidopsis thaliana] (TAIR:AT4G27910.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61740.2); similar to Histone-lysine N-methyltransferase ATX4 (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4) (Protein SET DOMAIN GROUP 16) (GB:Q9SUE7); similar to PWWP; Nuclear protein SET; SET-related re (GB:ABE82747.1); similar to PWWP; Nuclear protein SET; Zinc finger, RING-type; Protein kinase C, phorbol ester/diacylglycerol binding; SET-related re (GB:ABE80834.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain PWWP; (InterPro:IPR000313) 0.953108020434041 6.03885658957753 9.9276330774235e-05 0.00197628231509016 9.7003756064671 9.48539851585162 0.953108020434041 0.221902741712645 AT5G52960_at 8.5522314974936 8.45745130537072 8.70293674481979 8.59614007793468 9.52200432565543 8.97223154081799 9.0788611137745 8.6200563700747 8.49876625858151 8.35409428514302 9.8254260592293 10.0966907715384 8.97690665791819 9.42051656275902 9.9451077565941 9.4814286487954 8.44046166368106 9.03046147829175 8.1441386253584 0.225707369158014 0.218272612353096 0.223755553665965 0.224999336350248 0.215836634525743 0.225195221610726 0.216674695002110 0.215836634525743 0.246439596120877 0.229463691572086 0.219980785091831 0.217862668635751 0.228389848316802 0.221488153505979 0.219524412658827 0.215836634525743 0.250408425150078 0.247658283745926 0.221860005711570 5 5|0 +|/ 21494504 21494844 21494649.9 21494372 21495663 + gene protein_coding_gene TRUE TRUE AT5G52960.1 similar to hypothetical protein asr2994 [Nostoc sp. PCC 7120] (GB:NP_487034.1); similar to Os05g0569200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056361.1) 0.670484997059257 6.03796085177023 9.93998725996529e-05 0.00197783355155857 9.69914316339707 17.6799681250986 0.670484997059257 0.126358434123376 AT5G20740_at 3.52267968833015 3.44481702529417 3.22737678558251 3.35280514849892 3.40425942415397 4.11651189626985 3.68017659883851 3.7124771214252 2.97216965383481 3.45112428437766 3.92396766158407 5.06242749109652 5.03788919234565 4.48435204462583 5.63932006733344 5.16223246344201 4.24126887669228 4.16352167678886 3.50851425253452 0.244516862604716 0.237945285598276 0.243239611101329 0.247179341669465 0.241436878467403 0.237116110499258 0.237116110499258 0.243756590913224 0.243881857465636 0.239081185344541 0.237116110499258 0.242738942047876 0.247544573430984 0.237116110499258 0.245068166118964 0.238449288044092 0.23727661024202 0.238298373147564 0.237881786122313 5 5 - 7025885 7026373 7026093.364 7025688 7026534 - gene protein_coding_gene TRUE TRUE AT5G20740.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT4G25260.1); similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G62770.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.669485204571944 6.03727474265586 9.94946133688333e-05 0.00197881055161281 9.69819906555107 7.57012554329295 0.669485204571944 0.126002546555835 AT5G25830_at 1.98918919523088 1.87823839444055 1.92834799099272 2.13873255306585 1.79543426085053 1.75194220333091 1.88124294011794 1.49608811499046 1.63085543510452 1.70230164656222 2.71395671819056 3.11570619287447 2.58951485795895 2.46512157948532 3.03410318154506 2.96318446574533 2.65513239442144 2.55446021972912 1.86357852902007 0.191900588249755 0.191118230620101 0.191272489523030 0.198591057719695 0.191118230620101 0.19482084125499 0.192090502892223 0.200405644564392 0.195935860421066 0.194482651676162 0.192152875251685 0.202014824922884 0.203767688126189 0.196071689489494 0.199074070555027 0.191625591474606 0.207321721308884 0.191160872572706 0.194939127001944 5 5 - 9004414 9004925 9004638.909 9004401 9005505 - gene protein_coding_gene TRUE TRUE AT5G25830.1 zinc finger (GATA type) family protein Identical to Putative GATA transcription factor 13 [Arabidopsis Thaliana] (GB:P69781); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT4G32890.1); similar to Zinc finger, GATA-type [Medicago truncatula] (GB:ABE78372.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 0.560788419273282 6.03438625443374 9.98945292723296e-05 0.00198585338510661 9.6942236735504 4.10422328403051 0.560788419273282 0.0786985072924233 AT5G15550_at 5.37882628782543 5.4943774074596 6.4895736104145 6.38403787276142 5.3563681266805 4.79668646767571 4.37206343146983 4.44938296232887 2.72531066304373 3.15852077383495 3.62081342930765 3.58480921421322 3.40837874728617 3.16488812484775 3.90196955362650 3.65063266244617 3.74450088799175 3.27661088024920 3.5966338184376 0.274127218365412 0.265529223781669 0.265529223781669 0.268487966037543 0.265529223781669 0.271730238323167 0.265529223781669 0.269949797005530 0.274648350124197 0.269321902261004 0.269282260186698 0.269207344703217 0.266583227325429 0.272583685244866 0.27509083253144 0.266371411561328 0.274744819745433 0.282371377814317 0.279505418766113 5 5|0 -|/ 5059071 5059940 5059558.889 5058752 5062090 - gene protein_coding_gene TRUE TRUE AT5G15550.1|AT5G15550.2 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein / notchless protein, putative [Arabidopsis thaliana] (TAIR:AT5G52820.1); similar to WD40-like [Medicago truncatula] (GB:ABE82641.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain NLE; (InterPro:IPR012972)|similar to guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative [Arabidopsis thaliana] (TAIR:AT1G48630.1); similar to guanine nucleotide-binding family protein / activated protein kinase C receptor (RACK1) [Arabidopsis thaliana] (TAIR:AT3G18130.1); similar to WD40-like [Medicago truncatula] (GB:ABE82641.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain NLE; (InterPro:IPR012972) 0.608462174751363 6.02870871992172 0.000100685617805654 0.00200066251600832 9.6864060619752 8.69227978212772 0.608462174751363 0.101456641090014 AT5G14260_at 10.6347496287681 10.5685165686883 11.0867160530583 10.9537472587794 11.5933980727721 11.0913830959029 10.9668142418225 10.8350794703819 10.9076206299292 10.4303228783834 11.5676194024753 11.5461245450947 11.4102266362840 11.3916825190508 11.5083516786093 11.5681373090703 11.1227361618375 11.3826188079396 10.7284926815606 0.0915071146223298 0.0869265562728328 0.0906748474198663 0.0906953356887799 0.0920160681215429 0.0905123254660632 0.0879673352591045 0.0884096742259079 0.0876243043567327 0.0952389863622395 0.0869265562728328 0.0869265562728328 0.0869265562728328 0.0914037331453679 0.0911169936579933 0.0869265562728328 0.101642791141671 0.0906454571557426 0.0869265562728328 5 5|0 +|/ 4602774 4604025 4603508.333 4600999 4604485 + gene protein_coding_gene TRUE TRUE AT5G14260.1|AT5G14260.2|AT5G14260.3 SET domain-containing protein similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07670.1); similar to Os12g0236900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066466.1); similar to Nuclear protein SET [Medicago truncatula] (GB:ABE81113.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214) 0.589198105983563 6.01518268301716 0.000102597440463194 0.0020377173023172 9.66776184540363 22.0293001466898 0.589198105983563 0.0934239742625394 AT5G23880_at 5.29103209583077 5.40141326772705 5.79939723676254 5.80976095758909 5.37791965016834 4.93919738953263 4.06396361677986 4.52038035931713 4.12364565035862 3.95532951865271 4.1637568669479 4.72382568838376 4.30881180651607 4.70496164505559 4.44066796663264 4.69490262423912 4.73153019558193 4.65287853658351 3.78828013857534 0.197017745805811 0.199729456456277 0.196785561644173 0.206573984126084 0.19459444774519 0.200093644928233 0.204532451734408 0.19459444774519 0.196795788276006 0.197316807819577 0.199004400508025 0.196878170628697 0.202119636971943 0.199719183926723 0.198291833108136 0.19929152532341 0.19459444774519 0.200431588081357 0.199316125987776 5 5 + 8057232 8058118 8057696.273 8052507 8058357 + gene protein_coding_gene TRUE TRUE AT5G23880.1 CPSF100 (ENHANCED SILENCING PHENOTYPE 5) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus. Identical to Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit) [Arabidopsis Thaliana] (GB:Q9LKF9;GB:Q9FF92); similar to hydrolase [Arabidopsis thaliana] (TAIR:AT1G61010.3); similar to PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 1 [Strongylocentrotus purpuratus] (GB:XP_780045.2); similar to Os09g0569400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063978.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279); contains InterPro domain RNA-metabolising metallo-beta-lactamase; (InterPro:IPR011108) 0.629643310323227 6.01113427445512 0.000103177186685150 0.00204746514420562 9.66217614115667 9.40459241443249 0.629643310323227 0.111225138357766 AT5G55060_at 4.909019719029 5.21239066248935 6.06912038578123 5.54416855776938 6.08859492722471 5.95081999125146 4.32413133597341 4.80508153550152 6.19826670695386 5.42370896933405 6.25439472723348 6.35456767880579 6.00989071021943 6.62821760997887 5.78012983651992 6.43615984819297 5.98254033436864 6.38908787468095 6.20977158873626 0.222716875245938 0.217419775323168 0.214039543113132 0.21820960459068 0.222069911851089 0.21683195499908 0.215820199005983 0.217499588627354 0.231884739497406 0.214039543113132 0.214084866420274 0.215800094095346 0.221262325710803 0.218376818183039 0.22936141049899 0.216812371207716 0.218294586189216 0.220323545388673 0.220150340767739 5 5|0 +|/ 22362633 22363590 22363237.333 22359178 22363803 + gene protein_coding_gene TRUE TRUE AT5G55060.1 catalytic similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58510.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF94658.1); similar to Os07g0511000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059759.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 0.69298898737516 6.01109601050012 0.000103182682917049 0.00204746514420562 9.66212333542073 11.4495605556315 0.69298898737516 0.136032786072689 AT5G58410_at 7.2586287213886 7.49193834828959 7.65827192659067 8.00137810080535 7.99941803458724 7.76975625358697 5.97112337717786 6.54913875202587 6.37458868085116 6.31293623954876 6.73083266184391 6.85024021841089 6.6739858467909 6.87260282652431 6.36582115525825 7.08223445215488 6.59660172736883 7.21424162398551 6.77872751246302 0.221548998290030 0.218527010657392 0.227677468521024 0.221052619228658 0.221591421398675 0.241681164213601 0.226343985972832 0.216478822556037 0.232886624545304 0.222392061187772 0.222317811843956 0.219840621159199 0.216478822556037 0.226852455134272 0.221301878380983 0.219551925130271 0.244109282091505 0.222612853028809 0.216478822556037 5 5 + 23633695 23634530 23634064.273 23626889 23634612 + gene protein_coding_gene TRUE TRUE AT5G58410.1 binding / heme binding / protein binding / zinc ion binding similar to Os01g0977600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045575.1); similar to Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri] (GB:CAL57932.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Globin-related; (InterPro:IPR012292); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.674534016129974 6.00356807551749 0.000104270115300528 0.00206809668534097 9.65173016974247 13.9809921268048 0.674534016129974 0.129386751318367 AT5G40830_at 4.94642813231365 5.4367133370408 5.74238998242378 5.59449599443356 6.54329413939913 5.7617910264972 7.16723561108599 6.67627346581324 4.93046475301263 5.68121542831443 7.66806475467476 8.5465770872245 6.7015604304091 7.470958415102 7.57083632555405 6.5324442539857 5.99402248298436 6.09132055294474 5.21535038459694 0.318604803907154 0.318604803907154 0.325571006848541 0.324493071545091 0.318604803907154 0.318604803907154 0.322591832849846 0.318604803907154 0.319700525655764 0.318604803907154 0.322696490940622 0.324929555884008 0.318604803907154 0.325104417613315 0.322018684390749 0.320112810270610 0.328272549048478 0.327591247389462 0.318604803907154 5 5 - 16372090 16372397 16372215.5 16371608 16373517 - gene protein_coding_gene TRUE TRUE AT5G40830.1|AT5G40830.2 ATRAD3 (Arabidopsis thaliana Ras Associated with Diabetes protein 3) Ataxia telangiectasia-mutated and Rad3-related (ATR), plays a central role in cell-cycle regulation similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27230.1); similar to hypothetical protein [Prunus persica] (GB:AAO14627.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) 0.825063165838452 6.00023050114354 0.000104756156964962 0.00207627009183332 9.64711951693544 12.1574026577099 0.825063165838452 0.182656156851121 AT5G47750_at 6.54096560194421 6.88720419129027 7.06815787671643 7.36500370858437 7.94997721140098 8.01230309018768 6.46955749924569 6.86966333170972 7.04974220861725 6.67071395712754 7.12880341815561 7.06671481674949 7.43226455357516 7.05209969033733 6.90700954758515 7.48871134259313 7.01246371203093 7.27661537494272 6.82228803565277 0.190988376939315 0.179349036174499 0.187112615676551 0.185221744174394 0.175364080051745 0.186169115182919 0.176849769609775 0.173974195381999 0.180596870624846 0.191991091933174 0.181007037800552 0.173974195381999 0.176567013339816 0.180926484824996 0.186563983927782 0.17708304930167 0.196852421852403 0.176100847322539 0.186019691606219 5 5 - 19357244 19357676 19357438.091 19356929 19359587 - gene protein_coding_gene TRUE TRUE AT5G47750.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55910.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G44830.1); similar to protein kinase (GB:AAA33509.1); similar to Protein kinase PVPK-1 (GB:P15792); similar to G11A protein (GB:AAA33905.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.615008361102618 6.00008103159398 0.000104777980455699 0.00207627009183332 9.64691299440013 14.1544374176159 0.615008361102618 0.105544591082024 AT5G09270_at 3.8153504794914 4.72924881507786 5.00991541360457 5.04988178511352 4.97146307152349 5.13862195699206 3.41667830690751 3.66053129179377 2.85460667068880 3.49966329806387 3.4130055643557 3.50047347308753 3.16327351608879 3.19046610802509 3.67287921009668 3.28620471394318 3.91520294587263 3.90843084542852 2.91607567447808 0.230007357532512 0.234796544837421 0.243648779569969 0.227316453346730 0.232293706707716 0.244442661274112 0.230757141816127 0.231184629696688 0.224929502079010 0.227269739664313 0.228300684672176 0.224929502079010 0.233845221989806 0.244140812966077 0.234196254432261 0.231846510252307 0.242356747181691 0.235057266799399 0.235245230700567 5 5 + 2879682 2879982 2879831.091 2878885 2880817 + gene protein_coding_gene TRUE TRUE AT5G09270.1|AT5G09270.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83174.1) 0.776572583096396 5.99879579605446 0.000104965833841926 0.00207904237376295 9.64513704045104 7.77214002082428 0.776572583096396 0.166367903629385 AT5G46750_at 8.27950210627351 8.6078339754875 9.0126684355674 9.01951986325226 9.38734303311793 8.79526958982468 8.37448516640626 8.27007633223523 8.41724466683434 8.04033756792008 8.93102321658592 8.9280468640315 8.86262564295292 8.93932806506533 8.87636332535949 8.77380868195505 8.32393346137078 8.76225314227547 8.07613483792507 0.119951185115400 0.117858871317905 0.126159965390504 0.125081385885257 0.122181642986480 0.121849195103814 0.119918938911725 0.121800405376684 0.128627336385742 0.118702156246000 0.118655892159986 0.116678272159948 0.118726323032817 0.113889680985748 0.116654077508846 0.116262878994490 0.137129542152094 0.123952931383030 0.126042842275808 5 5|0 -|/ 18987209 18987961 18987623.7 18986976 18989159 - gene protein_coding_gene TRUE TRUE AT5G46750.1 AGD8 (ARF-GAP DOMAIN 8); DNA binding A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. similar to UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20), DNA binding [Arabidopsis thaliana] (TAIR:AT4G17890.1); similar to Os03g0854100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051935.1); similar to Os10g0574800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065477.1); similar to putative zinc finger protein [Oryza sativa (japonica cultivar-group)] (GB:AAW39027.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 0.646246472198168 5.99812475214548 0.000105064058591271 0.00208003767371324 9.64420968417896 17.2071265581920 0.646246472198168 0.118552035000426 AT5G21070_at 6.22117122530585 6.88662421831842 6.64177981410134 7.09829321844138 7.8450665748918 7.05125602249875 6.79721478942482 7.01000651302204 5.66291507697716 5.47422701775962 7.0070821278248 6.64061514971405 6.92237783318134 6.96132178246976 6.73462548466696 6.627740593999 6.36909309142082 6.91853885758156 5.22554845100368 0.251143336714750 0.237758682895733 0.255854576187495 0.249405071300625 0.234327903170602 0.247756530013328 0.248472743229531 0.237579993330394 0.253608956396893 0.238215423971894 0.235560116255877 0.235475882130514 0.240085683486323 0.242427858375459 0.245243390742031 0.238948865717090 0.244565787380963 0.236275646259897 0.249083174465022 5 5|0 +|/ 7156451 7157445 7157026.8 7156175 7157769 + gene protein_coding_gene TRUE TRUE AT5G21070.1 similar to Os01g0277700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042737.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81147.1) 0.874394452079665 5.98918510517819 0.000106382036031694 0.00210516946858764 9.63184891668792 13.0573788205109 0.874394452079665 0.199324695699289 AT5G37310_at 5.034484889096 5.05979282207522 4.95606005640654 5.59471882792376 5.01339524385504 4.77478396555873 4.251093582184 4.67371049398475 4.54136236326061 4.30463109060918 5.17496515618907 5.76621747483275 5.49841176747238 5.65614955610198 5.70040331888414 5.09222726267451 4.90931722399237 4.9193620898415 3.97588166739161 0.233580252788586 0.221833638860794 0.232591872906254 0.226684809669199 0.223750960540843 0.241557962030218 0.228591470848288 0.223271287845789 0.232576296115773 0.231732132152031 0.221833638860794 0.223838000426705 0.224083412019480 0.239441202046576 0.225518918433689 0.228815103311670 0.231988848973997 0.224337975766533 0.233277207570701 5 5 - 14790073 14790905 14790607.455 14789742 14793437 - gene protein_coding_gene TRUE TRUE AT5G37310.1 transporter similar to endomembrane protein 70 family protein [Arabidopsis thaliana] (TAIR:AT1G08350.2); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT1G14670.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G01970.1); similar to Putative endosomal protein [Oryza sativa (japonica cultivar-group)] (GB:AAK52585.1); similar to putative syntaxin SYP111 [Oryza sativa (japonica cultivar-group)] (GB:BAC57816.1); similar to Endosomal membrane proteins, EMP70 (ISS) [Ostreococcus tauri] (GB:CAL57055.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) 0.697821217047907 5.98666844135962 0.000106756253203755 0.00211161099966133 9.628366958024 9.7265500376367 0.697821217047907 0.138882800683297 AT5G47570_at 10.8719732638000 10.8762438741038 11.4140233992905 11.4284250877285 11.1706236166007 11.0945195966557 10.9327225537787 11.0049034946590 10.8582535050639 10.9444666484321 11.4415263458311 11.5248413853242 11.2486003765459 11.4322734158980 11.6653142666487 11.3488226858375 11.2555158345072 11.4765839444114 10.6583111177014 0.0664375539430851 0.0656178501527624 0.0708912161294757 0.0677845844368814 0.0653507267986853 0.0710050364305532 0.0651975576005488 0.0663305372272315 0.0685394173862517 0.0663365111276338 0.0651975576005488 0.0659213434859922 0.0714849755592696 0.0717169033953484 0.0663989036800325 0.0662033199877274 0.0712099594758848 0.0654037259263879 0.067248982086643 5 5|0 -|/ 19310120 19311854 19311483.222 19309834 19311963 - gene protein_coding_gene TRUE TRUE AT5G47570.1 similar to hypothetical protein 25.t00006 [Brassica oleracea] (GB:ABD64969.1); similar to hypothetical protein 26.t00015 [Brassica oleracea] (GB:ABD64995.1) 0.479639076646566 5.98515685004783 0.000106981697425758 0.00211510530759591 9.62627511601433 22.2214436302977 0.479639076646566 0.0183369009384686 AT5G03905_at 7.63962785993571 7.80941687391657 8.9848124417664 9.02141455732975 8.91845671509579 8.1145264222098 8.08103126635627 7.79180149393096 6.86673993816531 6.87924647993755 7.37763327554884 7.45915707056941 7.3792186331593 7.24761071075386 6.96715384463177 7.43518815585282 7.64983334494492 7.41924036277955 6.76064855347881 0.177278207271352 0.185173096172055 0.178311095918157 0.187726797673291 0.177556811511066 0.184913657493263 0.174033010903552 0.174247062944850 0.200416933638966 0.182929316721449 0.184154089226197 0.174033010903552 0.174690962785539 0.177358772671013 0.179942477862783 0.174033010903552 0.181092713618624 0.182243499812327 0.19052877691869 5 5|0 +|/ 1052733 1054003 1053247.3 1052579 1054271 + gene protein_coding_gene TRUE TRUE AT5G03905.1 hesB-like domain-containing protein Identical to Iron-sulfur assembly protein IscA-like 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8LCY2;GB:Q9FFM8;GB:Q9LZB9); similar to ATCPISCA (CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN), structural molecule [Arabidopsis thaliana] (TAIR:AT1G10500.1); similar to HesB/YadR/YfhF [Medicago truncatula] (GB:ABE77855.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR000361) 0.730333797409198 5.9829668430098 0.000107309227363360 0.00212061381849411 9.62324382041394 15.3963481614713 0.730333797409198 0.150878043965309 AT5G63440_at 4.92246584016943 4.83261624812335 5.16485579646465 5.13349382274725 6.3346092162007 5.48885236582434 4.96441601252645 5.08014426925697 4.74528538237719 4.25232984285969 5.40276243068407 5.60355332964772 5.48926814314878 5.56849020013093 5.37742137778417 5.42084838602404 5.67972599613435 5.22908132439087 4.81405780450502 0.222474351941484 0.211818314900496 0.220315599526493 0.215254665689739 0.219497628070554 0.223879866702398 0.215868112546895 0.217409107201529 0.213805747703899 0.2258688994651 0.211818314900496 0.211818314900496 0.215425200920068 0.225259137987208 0.216686979734252 0.211818314900496 0.214923863648866 0.223477972293302 0.218663373159881 5 5|0 +|/ 25423605 25424913 25424375.556 25423528 25425649 + gene protein_coding_gene TRUE TRUE AT5G63440.1|AT5G63440.2|AT5G63440.3 similar to Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS) [Ostreococcus tauri] (GB:CAL57463.1); similar to Os07g0295200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059406.1); contains InterPro domain Protein of unknown function DUF167; (InterPro:IPR003746)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49170.1); similar to Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS) [Ostreococcus tauri] (GB:CAL57463.1); similar to Os07g0295200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059406.1); contains InterPro domain Protein of unknown function DUF167; (InterPro:IPR003746) 0.724022548184667 5.98232561696899 0.000107405329919538 0.00212154599303211 9.6223561301668 10.2778241506177 0.724022548184667 0.148641183258554 AT5G07820_at 4.74509052981189 5.30454895189585 6.04531738249736 5.90099869264894 6.3057567643025 5.36867308884286 4.59434193863976 4.40170963851639 4.65321090871909 4.88102763276428 5.24839709340644 5.45054709130058 4.66586332175936 5.1218495275807 4.94234283882985 5.039362201855 4.48093895623011 4.91306735467377 3.716325452952 0.205054560769568 0.201716185297424 0.209478543533976 0.207800118211065 0.219029727103924 0.220794622258313 0.205368019410745 0.216294335657376 0.225542326616281 0.202791814884517 0.211691082039965 0.201716185297424 0.224868409546376 0.201716185297424 0.205121847767881 0.208567803008913 0.213460567181814 0.208059217760696 0.211109697424766 5 5 - 2498872 2499435 2499255.727 2498750 2501210 - gene protein_coding_gene TRUE TRUE AT5G07820.1 similar to chromosome scaffold protein-related [Arabidopsis thaliana] (TAIR:AT5G61260.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to erythrocyte binding protein 2 [Plasmodium falciparum] (GB:AAQ73468.1); similar to erythrocyte binding protein 3 [Plasmodium falciparum] (GB:AAQ73469.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.854852550374815 5.97985715086155 0.000107776147363499 0.00212790121021193 9.61893829102802 10.0331299799026 0.854852550374815 0.193407817618034 AT5G11460_at 3.49046372859 3.39434248094606 4.24231610294043 4.54012544124049 4.19539212573674 3.68693289954219 4.33395462136527 4.42466280426761 3.69811714798677 4.11873692934462 4.95694976226544 5.26281310034685 4.88620223913408 5.05167173334185 4.70018330847785 4.58127452542081 5.08778084301744 4.69597607439832 3.99615137175636 0.203513811158622 0.203758430077766 0.206408652859071 0.213201736255635 0.207583577883062 0.218667354523609 0.207334260759460 0.209126368921407 0.223608161771878 0.214278191936730 0.203513811158622 0.206012098231120 0.210099243737385 0.219961011323199 0.214186032865072 0.214161929072172 0.210346177827673 0.214468481192198 0.20632898920037 5 5 - 3657065 3657883 3657533 3656812 3658932 - gene protein_coding_gene TRUE TRUE AT5G11460.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.2); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABE83632.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 0.610261849421904 5.97726327181279 0.000108167281341354 0.00213465158324781 9.61534580680594 8.45878624124339 0.610261849421904 0.104506743662169 AT5G44060_at 5.5921520241014 6.154645826988 6.23341069542108 6.6863928101443 7.42175547064698 6.7992487421254 5.99857799114272 6.82074939145387 5.47114527484082 5.29618976735066 7.0884244856962 6.71564308725404 7.16135281010103 6.96644152765864 5.96699432653335 6.71346319853206 6.28868146545975 6.39561590680812 5.56982816316001 0.210609625221154 0.202062782239669 0.218569173531155 0.208317778881089 0.211999292916149 0.208784757994677 0.214341039190165 0.208360010041588 0.220890619972031 0.212210533176236 0.204498026120263 0.212942654153036 0.204896394361298 0.206305102574763 0.20775340762404 0.205605684416533 0.230745456564506 0.211815095065421 0.208725916608671 5 5 + 17748505 17748864 17748664.545 17748232 17749132 + gene protein_coding_gene TRUE TRUE AT5G44060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04000.1); similar to Os02g0621600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047462.1); similar to Os04g0512500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053299.1) 0.930013326858925 5.97335912625671 0.000108758858575377 0.00214437410450339 9.6099366938874 12.5172657037309 0.930013326858925 0.217875238456826 AT5G55910_at 8.3699205181026 8.62942218406469 9.38367824006802 9.37779175236796 9.8837896311196 9.27241027581725 9.2111555102203 9.20636384863168 9.3198048900762 9.28065157179129 10.2831735507638 9.93292208285444 10.1093548104866 10.2256252321789 9.4743339347099 10.1260070715158 9.73538696979028 9.70512414661995 9.31429782260471 0.156376329213486 0.143733489018457 0.148188646801949 0.143152088346151 0.141812363774330 0.157766248978017 0.140136852190578 0.145700780654022 0.15966089400546 0.150790248341226 0.137707981981384 0.143905451149607 0.141711485640714 0.145768390789028 0.152425702053099 0.139215605207010 0.160400989286990 0.144219226598469 0.141517004776899 5 5 - 22657320 22657839 22657555.818 22657070 22659580 - gene protein_coding_gene TRUE TRUE AT5G55910.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to protein kinase (GB:AAA33509.1); similar to Protein kinase PVPK-1 (GB:P15792); similar to G11A protein (GB:AAA33905.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.634637419814636 5.97284181731603 0.000108837503437654 0.00214494930734327 9.60921979912407 18.7937710298935 0.634637419814636 0.114945747813100 AT5G18950_at 3.84435248045597 4.07839799887330 4.62146408639939 4.69535871606618 4.78477818533025 4.7437162880218 4.0009502864444 4.32746392989963 3.88061904438298 3.92836137942651 4.34158974847677 4.58035754979963 4.33067648223015 4.7394461413262 4.07046667212499 4.35202505964904 4.60847084744182 4.20060186659344 4.1024797123342 0.183739288465197 0.185519171548721 0.191706990632224 0.190408631845805 0.186396529578897 0.185249632637487 0.181617243336120 0.1772593542572 0.184649662401769 0.178647173591938 0.176780309588965 0.179224912674627 0.176885630212740 0.182211270037468 0.182551767185198 0.182674836972480 0.179290628140867 0.175481648843166 0.180942140331023 5 5 - 6328542 6328958 6328758.909 6328381 6329972 - gene protein_coding_gene TRUE TRUE AT5G18950.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62670.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96889.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) 0.540502864471716 5.96773584396159 0.000109617021555998 0.00215933039185374 9.60214167834794 8.57378075043794 0.540502864471716 0.0710441477550896 AT5G60400_at 4.93432908005661 5.19438193439608 5.37375529843181 5.54946808411247 6.40904473794628 5.73677100455116 5.0540640695102 5.51406159889332 6.42301697805515 6.11589880228176 7.66392408855041 7.28975934587189 7.19595708766834 7.38442307956489 6.81418073448388 7.25823609650748 6.5033300042796 6.85199393954453 6.22723210405746 0.305762879385019 0.280636897377393 0.288582924402025 0.292015127405189 0.288935858316306 0.293093135522655 0.28296491625832 0.282014192442663 0.290535250333812 0.275395937767436 0.283634600835538 0.276177214044335 0.274881405460693 0.274881405460693 0.275927215531714 0.276329561195469 0.285348866700837 0.281757098900790 0.275016482114976 5 5 - 24308380 24308761 24308531.3 24308366 24309388 - gene protein_coding_gene TRUE TRUE AT5G60400.1|AT5G60400.2|AT5G60400.3 unknown protein| |similar to hypothetical protein MtrDRAFT_AC152176g22v1 [Medicago truncatula] (GB:ABE89561.1) 0.728946764736901 5.96723877339112 0.000109693226771101 0.00215985024367513 9.60145240582672 12.1585385635824 0.728946764736901 0.15106910629055 AT5G64730_at 4.9960193292164 5.5150938774587 6.24912269963285 6.21586960734696 7.0018021744652 6.07646302520551 5.47685214695136 5.87188913564535 4.9827681106207 4.6859652468084 5.72989245578374 5.30029612579795 5.61855029149617 5.95628285888713 5.417642093453 5.94298381986268 5.76970445344168 5.24586650640203 4.79787728757682 0.223639628211112 0.217937812205829 0.216160807838755 0.217486001203354 0.225699425321539 0.220502042482713 0.218030347763675 0.218388926790463 0.220830178879806 0.221380309098741 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.221600184250729 0.216160807838755 0.216745091298029 5 5|0 +|/ 25891176 25892202 25891619.1 25890338 25892493 + gene protein_coding_gene TRUE TRUE AT5G64730.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to Mitogen-activated protein kinase organizer 1 (MAPK organizer 1) (GB:Q3KQ62); similar to Os02g0543400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047075.1); similar to hypothetical protein LOC496482 [Xenopus tropicalis] (GB:NP_001011071.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 0.860649765824955 5.96482917335759 0.000110063443654960 0.00216615606032375 9.59811055456953 11.1478169364782 0.860649765824955 0.196006919263221 AT5G23460_at 4.87462342275594 5.31164277076294 5.4903059977207 5.85929852664931 5.81016113149394 6.45394154735694 3.91856019514002 4.56271078722977 4.10777303154834 4.08692118573481 4.85353146977516 4.46560040139817 4.74062702681537 4.93982633572837 3.94160581670829 4.83769571397026 4.93614817427971 4.71561954869831 4.56932183321002 0.249208770753234 0.230862484077548 0.235242987397580 0.239356625318463 0.228718378740914 0.233264987660749 0.232416154350763 0.235849790868014 0.228718378740914 0.23482621052709 0.237037991598081 0.233605248926840 0.232275347751457 0.243957572310582 0.235065975009130 0.232954329165693 0.245039608690419 0.232348201198819 0.228718378740914 5 5 + 7913111 7913382 7913246.909 7912772 7913508 + gene protein_coding_gene TRUE TRUE AT5G23460.1 unknown protein 0.830351150461853 5.96331879737952 0.000110296183091776 0.00216975169202311 9.5960153781713 9.75190746126508 0.830351150461853 0.186106159290098 AT5G24270_at 1.97815896365948 2.5054367585875 2.03612063428413 1.76772343628348 3.87527861133395 3.75957314044345 1.33979669757252 1.01605378498964 2.1741032775905 2.07796812436327 2.73356551629943 2.73188169116410 1.91281007915968 2.08990095169442 2.32006949201826 1.81562534714251 1.7753042199812 2.14192199140931 1.91896985700199 0.207155863035729 0.206376826770003 0.217113127198208 0.207219755733283 0.232203145007776 0.221798200997062 0.210694249358568 0.205288589927297 0.214210283660631 0.205436580077356 0.21024167177576 0.205425827998044 0.204358366793122 0.218242371620728 0.216185855650038 0.204185544284529 0.219475118786623 0.210137716326455 0.218371902457639 5 0|5 /|- 8238826 8239745 8239243.444 8238784 8240182 - gene protein_coding_gene TRUE TRUE AT5G24270.1 SOS3 (SALT OVERLY SENSITIVE 3) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. Identical to Calcineurin B-like protein 4 (Protein SALT OVERLY SENSITIVE 3) (CBL4) [Arabidopsis Thaliana] (GB:O81223); similar to CBL8 (CALCINEURIN B-LIKE PROTEIN 5) [Arabidopsis thaliana] (TAIR:AT1G64480.1); similar to calcineurin B-like protein 4-1 [Populus euphratica] (GB:ABJ09703.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 0.641466781253662 5.9567977999168 0.000111307090043614 0.00218765313485617 9.5869655399575 4.4083420854412 0.641466781253662 0.118420000038973 AT5G13270_at 1.95039639402371 1.96824746302424 2.26177420079383 2.35726499886365 2.40535682045085 3.06492906920234 1.95295210048958 1.69779965153607 1.76196566546333 1.85707107838344 2.62390381983102 2.49153926199029 2.44197317610505 2.56629372228241 2.61600262836892 2.58624923843799 2.69594361536525 2.22169888351138 1.93722724877505 0.201083227615797 0.204506474658465 0.200172792707659 0.202033810776710 0.208604734713389 0.221359827238563 0.202883322502230 0.207495626559632 0.203695601963770 0.205797219591520 0.208993931796547 0.200172792707659 0.210065252428190 0.201709929254301 0.208940251381265 0.204621893810896 0.206665499744454 0.204863493226507 0.208009690867912 5 5 - 4246959 4247458 4247206.091 4246957 4249215 - gene protein_coding_gene TRUE TRUE AT5G13270.1 pentatricopeptide (PPR) repeat-containing protein similar to EMB2261 (EMBRYO DEFECTIVE 2261), binding [Arabidopsis thaliana] (TAIR:AT3G49170.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.6541724578776 5.9558436311678 0.000111455838041001 0.00218958410099541 9.58564080214171 4.39860935768661 0.6541724578776 0.123534302571812 AT5G65780_at 7.61639536975571 7.55562877082211 8.67550850245394 8.31053553606396 8.79200455232049 8.35430769840649 8.6309350627317 8.29030429307962 7.971074371547 7.92190732235924 8.53148484457943 8.61860927749733 8.48050765829662 8.85416292574037 8.63834154190092 8.89505498502586 8.66006434074591 8.73091459421494 7.86377645142317 0.163452272380763 0.163007185268993 0.164901394980195 0.166327922025474 0.181048729091625 0.181120329912821 0.171680620624443 0.164216447998414 0.169497466432780 0.168365306390534 0.156686638500867 0.1633767871116 0.156686638500867 0.156789777197977 0.159958772486251 0.156686638500867 0.179678643572301 0.162975254111371 0.172733127382049 5 5 + 26334715 26335754 26335147.4 26332616 26336038 + gene protein_coding_gene TRUE TRUE AT5G65780.1 ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant Identical to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5) (BCAT5) [Arabidopsis Thaliana] (GB:Q9FYA6;GB:O49539;GB:Q9FLG9); similar to ATBCAT-3, branched-chain-amino-acid transaminase/ catalytic [Arabidopsis thaliana] (TAIR:AT3G49680.1); similar to branched-chain amino acid aminotransferase [Solanum tuberosum] (GB:AAF07191.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786) 0.633498168718817 5.95221295043525 0.000112023782303219 0.00219974482745503 9.58059881263 16.5757334245926 0.633498168718817 0.115377726396174 AT5G08030_at 1.71914947859309 1.50703455584520 1.78206132875441 1.41131626006893 1.87220679922673 1.87868887603258 3.01105785855414 2.73279414798572 3.07350218204591 3.38880144889592 5.00145164961981 5.71517409032159 4.35423910248355 4.66168688596655 6.10192990784143 4.24207718987316 3.13213400117947 3.75433992571660 2.44848387803258 0.226239184120204 0.233354050323860 0.224852175750818 0.225107320491879 0.22876869564524 0.224852175750818 0.23259081011152 0.228978494326674 0.229842233102388 0.226899805041398 0.233572795328629 0.229923294362397 0.225622531356781 0.233142727340384 0.243857510610132 0.229928425404682 0.226928154783554 0.228799575631427 0.238502569756181 5 5|0 -|/ 2575163 2575739 2575413.3 2575034 2576784 - gene protein_coding_gene TRUE TRUE AT5G08030.1 glycerophosphoryl diester phosphodiesterase family protein similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74210.1); similar to glycerophosphodiester phosphodiesterase-like protein [Manihot esculenta] (GB:AAV74406.1); similar to Os01g0763600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044335.1); similar to Os03g0603600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050628.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) 0.571837948454966 5.94965533327622 0.000112425726809337 0.00220663819100705 9.57704580055272 5.78460946169097 0.571837948454966 0.088226885517223 AT5G66470_at 6.84002559796821 6.57118080384217 6.7897363419533 6.75966417446684 7.1700014869492 6.8313206854053 6.74572501772272 6.6372243844763 6.08403420797238 7.20505029371932 7.52360805435158 8.03024166520453 7.6664871318905 7.42085248951564 8.24365410195267 7.66385418070723 7.63223430365848 7.26182275834072 7.02096591730245 0.132958285052781 0.129660242386637 0.135447784443269 0.139794725362411 0.133076559459738 0.134615506108132 0.136345359575271 0.132953520048013 0.145386026288904 0.129660242386637 0.134623494164094 0.138190995237124 0.130908556766856 0.129660242386637 0.138600450779621 0.131837166954273 0.136659918135098 0.136880045164874 0.133614574401310 5 5|0 -|/ 26559224 26560515 26559809 26558937 26561585 - gene protein_coding_gene TRUE TRUE AT5G66470.1 GTP binding / RNA binding / nucleic acid binding similar to GTP-binding protein (ERG) [Arabidopsis thaliana] (TAIR:AT1G30960.1); similar to hypothetical protein [Thellun (GB:ABB45853.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain KH, type 2; (InterPro:IPR004044); contains InterPro domain GTP-binding protein Era; (InterPro:IPR005662) 0.549734625281299 5.94335521979479 0.000113422423373046 0.00222519354194088 9.5682895079781 14.0182903826150 0.549734625281299 0.0773263799578483 AT5G63670_at 9.5766990113480 9.54206009159996 10.1663755902512 10.1991005337381 10.3224689392756 10.1294978891165 9.65570189844827 9.68383134460154 9.41654143470912 9.34697811513858 9.82716863033423 9.80776515647882 9.80223327299054 9.77380655195052 9.8922407420084 10.0738315134958 9.5997353947454 9.56666442259715 9.45738279027564 0.0990298190663988 0.0987618829408928 0.100353285116294 0.0981131734396645 0.103696917569438 0.101329715933810 0.095703694325324 0.0936548729757483 0.108952302695002 0.094866234035779 0.100458061842219 0.0938269398834082 0.0967254065067466 0.097158836729 0.0963628820473357 0.093889061629872 0.110759628587004 0.101554468297346 0.0972008040932766 5 5|0 +|/ 25505253 25506438 25505581.571 25505207 25506654 + gene protein_coding_gene TRUE TRUE AT5G63670.1 transcription initiation protein-related Identical to Transcription elongation factor SPT4 homolog 2 [Arabidopsis Thaliana] (GB:Q94C60;GB:Q9FFP7); similar to positive transcription elongation factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G08565.1); similar to Transcription elongation factor SPT4 homolog 1 (GB:Q8LCQ3); contains InterPro domain Transcription initiation Spt4; (InterPro:IPR009287) 0.487875457731617 5.93767767850762 0.000114328728292488 0.00224195954935137 9.56039332759767 19.5094159909388 0.487875457731617 0.0347404246857587 AT5G61670_at 10.9969104872053 10.8072731983194 11.8546699064570 11.6390254909233 11.6888720052514 11.6027571453124 11.6818504087777 11.5871004582919 11.2892615646351 11.3903308182531 11.9889984727724 11.8427176644253 11.9233754904043 11.9421139690595 11.7435245628898 12.0204363566143 12.0067497339612 12.0054966561264 11.3396562356568 0.069551242281567 0.0688704672444436 0.0687245576397434 0.0699020828843382 0.06791727969321 0.0719736500862605 0.069182418437869 0.072343228279438 0.0765864380044692 0.0670901076862857 0.0698620063872448 0.0670901076862857 0.0694635786235118 0.0730873351654173 0.0706942235675833 0.0670901076862857 0.0779479408765839 0.0673667891164443 0.0680035655691208 5 0|5 /|+ 24801547 24802388 24801984.75 24800730 24803171 + gene protein_coding_gene TRUE TRUE AT5G61670.1|AT5G61670.2 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. similar to chaperone protein dnaJ-related [Arabidopsis thaliana] (TAIR:AT5G06130.2); similar to Os02g0651300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047593.1); similar to Os02g0535000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047038.1); similar to chaperone protein dnaJ-related (ISS) [Ostreococcus tauri] (GB:CAL57920.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.51123728630206 5.93730756856705 0.000114388077270033 0.00224210929864335 9.55987841763499 23.1192704639656 0.51123728630206 0.0544113523436003 AT5G48230_at 7.33520128672385 7.25563969077476 7.37230591529311 7.3980955680879 7.92881164605378 7.80651893835573 7.68994226252367 7.85246405504971 7.38529475806968 7.14511187473012 8.62862841123625 8.6357827360737 8.15723414457271 8.22526034300003 8.48484816750705 7.84509730227899 7.7274538167562 8.41677553582138 7.59811089144473 0.136314961384591 0.130285749911189 0.140259248816348 0.136780199331111 0.135084411128224 0.139649637975460 0.132832679724414 0.128186539540202 0.139581263794918 0.139334377091989 0.134810645414542 0.136664446724096 0.128186539540202 0.130135231215466 0.129969432642306 0.131521352852237 0.135595979497028 0.139421989560408 0.132037621486560 5 0|5 /|- 19569797 19570448 19570142.714 19569368 19572755 - gene protein_coding_gene TRUE TRUE AT5G48230.1|AT5G48230.2 ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276); acetyl-CoA C-acetyltransferase Identical to Acetyl-CoA acetyltransferase, cytosolic 1 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 1) (Thiolase 1) (AAT1) [Arabidopsis Thaliana] (GB:Q8S4Y1;GB:Q93YW6;GB:Q9LUB1); similar to acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G47720.5); similar to Acetoacetyl-coenzyme A thiolase [Raphanus sativus] (GB:CAA55006.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Acetyl-CoA acetyltransferase, cytosolic 1 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 1) (Thiolase 1) (AAT1) [Arabidopsis Thaliana] (GB:Q8S4Y1;GB:Q93YW6;GB:Q9LUB1); similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative [Arabidopsis thaliana] (TAIR:AT5G47720.1); similar to Acetoacetyl-coenzyme A thiolase [Raphanus sativus] (GB:CAA55006.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); contains InterPro domain Thiolase; (InterPro:IPR002155) 0.491041871126956 5.93621105948818 0.000114564101542543 0.00224435458392368 9.55835279317668 15.4005262029765 0.491041871126956 0.0380578616887626 AT5G07870_at 3.25548151353343 3.67633226350631 3.85716263570681 3.74733302826455 3.96002969513732 3.66896849111346 3.15120670468992 3.13229745778838 3.74320868758467 2.90121801591644 4.79724042334913 4.75863231063375 3.70057351539552 3.80941413345776 4.18022398617031 3.95893037119902 2.87808662323619 3.80335716773528 3.37356488455112 0.223568066643787 0.212620631623694 0.210818197838688 0.218977375459588 0.218415357287879 0.215630863121557 0.210704267817495 0.219902426329152 0.223369738048528 0.222248358096105 0.211369821104951 0.217412576943564 0.226954753299619 0.215248689224198 0.225281016691278 0.210704267817495 0.263672424294293 0.225026114690695 0.220882348961695 5 5 + 2514770 2515122 2514939.727 2513795 2515419 + gene protein_coding_gene TRUE TRUE AT5G07870.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07860.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.575510382361201 5.93594935630319 0.000114606155975926 0.00224435458392368 9.55798864620262 7.21867039659146 0.575510382361201 0.0906271397174617 AT5G59480_at 6.30858652252857 6.57727281921237 7.0745183617648 7.23364283153054 7.03141997958202 6.74554182074464 8.58261972450556 8.34268213496042 6.61431728397474 6.6866693640807 8.38764220784029 9.11813364229752 7.94955450576929 7.76636921184914 8.31126401790943 7.71749343804605 7.68613520224004 8.0271259689294 6.39193532576685 0.214289216244608 0.209203390431154 0.208542868100823 0.214103897137487 0.203349389102769 0.208047572506161 0.20446522319111 0.212867005316024 0.224851253097252 0.203298278693456 0.209036249699341 0.203221353541667 0.203221353541667 0.213003204615929 0.203221353541667 0.203221353541667 0.210312918032891 0.216841950176772 0.221108643185669 5 5|0 -|/ 23996847 23997672 23997318.8 23996616 23998816 - gene protein_coding_gene TRUE TRUE AT5G59480.1|AT5G59480.2 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834)|similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to HAD-superfamily hydrolase subfamily IA, variant 3 [Medicago truncatula] (GB:ABE82011.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.562323948928243 5.9353178777566 0.000114707699540082 0.00224532898084024 9.55710993223555 14.5794215738374 0.562323948928243 0.0842136861036335 AT5G08040_at 8.89024417458957 9.00436945504926 9.49279902193524 9.62195732315005 9.62557910952307 9.42524458086455 9.45200685537395 9.54709685402364 9.06330084805402 9.26805768010441 9.94807943970291 10.2191502216891 9.74485397595577 9.98038156258457 10.1812888570510 9.97563865661806 9.63433554966152 9.91626733849644 9.45377006144879 0.104851099231963 0.108358783952064 0.109976561300204 0.105939938012347 0.102182295641969 0.103984032468241 0.102510345615929 0.104924102268781 0.124525035211782 0.105253780930439 0.105786307278294 0.101396276256043 0.108092295617046 0.108706145076226 0.104125698049146 0.100551451010185 0.117425875086692 0.105084563312757 0.100551451010185 5 5|0 -|/ 2577363 2578048 2577669.333 2577203 2578120 - gene protein_coding_gene TRUE TRUE AT5G08040.1 TOM5 (MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG) Identical to Mitochondrial import receptor subunit TOM5 homolog (Translocase of outer membrane 5 kDa subunit homolog) (TOM5) [Arabidopsis Thaliana] (GB:Q9SD80;GB:P83431); similar to hypothetical protein LOC_Os12g38650 [Oryza sativa (japonica cultivar-group)] (GB:ABA98999.1) 0.503127797229985 5.93433526188711 0.000114865898463357 0.00224741098987754 9.55574248345305 18.9882666618582 0.503127797229985 0.0486041754017639 AT5G47435_at 9.64721337783616 9.79870753753073 10.2099007444913 10.1436863907661 10.3863963121830 10.4669805537622 9.44005569578347 9.78988937944714 10.3033926114733 10.2138858961663 10.8533472012760 10.5783927972201 10.5445056783322 10.7485321018213 10.5606540060331 10.6169006088479 10.5721681207295 10.762706925238 10.1487394750375 0.0752530486296255 0.0738808673999035 0.0720186340662959 0.0720625459303662 0.0745969871069721 0.0757396702565876 0.072460424506681 0.0722670453070406 0.0807515440130106 0.0705484942456449 0.0703063469665628 0.0713847196063593 0.0726342110417604 0.0713617753236142 0.0722715616802681 0.0703063469665628 0.0732021268152819 0.0751205078411856 0.0703063469665628 5 5|0 +|/ 19259656 19260358 19259987.9 19258930 19261215 + gene protein_coding_gene TRUE TRUE AT5G47435.1|AT5G47435.2 formyltetrahydrofolate deformylase, putative similar to formyltetrahydrofolate deformylase, putative [Arabidopsis thaliana] (TAIR:AT4G17360.1); similar to formyltetrahydrofolate deformylase, putative [Brassica oleracea] (GB:ABD64983.1); contains InterPro domain Formyltetrahydrofolate deformylase; (InterPro:IPR004810); contains InterPro domain Formyl transferase, N-terminal; (InterPro:IPR002376) 0.532709719181434 5.93235407851533 0.000115185574697806 0.00225175847479086 9.55298493970002 20.4236822110565 0.532709719181434 0.0683975976462357 AT5G12400_at 5.41636745288352 5.16158459497133 5.89717057552138 5.91882106199602 6.3070447326365 5.9030461046304 5.13830629497862 5.07815457228998 5.43048737725411 5.13503394500067 5.3917643997341 5.77515846565062 5.31942654875095 5.79248369950609 5.52697891367503 5.80389148660918 5.37791405631673 5.82238283342128 5.29952701336027 0.239073703203888 0.233699107865910 0.245755399923508 0.235464750464893 0.246820769893000 0.243607194307741 0.241922356520656 0.233857326167924 0.256801654891530 0.251929866936032 0.241847599838195 0.246338240065514 0.238726413502330 0.23880698071777 0.237488226664854 0.241862585369163 0.242202597766448 0.247830165548916 0.244185171531935 5 5 + 4020319 4020840 4020632.364 4013814 4020910 + gene protein_coding_gene TRUE TRUE AT5G12400.1 PHD finger transcription factor, putative similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G22760.1); similar to PHD finger transcription factor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31424.1); similar to Os07g0661500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060538.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DDT; (InterPro:IPR004022); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 0.560408997584094 5.9323145042346 0.000115191969941621 0.00225175847479086 9.5529298514734 11.0473616715700 0.560408997584094 0.0833929882577307 AT5G51030_at 1.87011315816977 1.45106850420763 3.4351716969586 3.13710723136353 2.94669143055523 2.86250043513010 2.83946067088217 3.05050484676618 2.03205045165122 2.47624745663291 2.47089077924923 1.98696927001298 2.60863489650257 3.26174019479443 2.24064238964224 2.72704495136029 3.07719184779818 2.68173917716197 2.22925104293015 0.210317927781192 0.198770606854883 0.202043301068532 0.203516618438921 0.216309440513746 0.214938363940691 0.206806314618297 0.200772853378776 0.202856307315974 0.202286098315706 0.205111833621451 0.199163143146304 0.206137046984503 0.207197167423891 0.218980681050396 0.198770606854883 0.210852379972025 0.207987887141728 0.203872479112431 5 5 - 20765112 20765703 20765361.455 20764985 20766732 - gene protein_coding_gene TRUE TRUE AT5G51030.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G61830.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE80213.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.589293970702952 5.93060398200625 0.000115468755440836 0.00225615184270975 9.55054854071866 5.13793041611415 0.589293970702952 0.0972912974496633 AT5G05310_at 4.14880989589048 4.15709602490098 5.09845374835233 5.14779295117319 6.20203811802391 4.90223965005666 3.88949227719215 3.35448314979714 4.03400981207451 3.91851170657486 4.73060170780686 4.68092774688 4.33687191299375 4.90384457720923 4.17731569092521 4.6744373339014 4.71472241796812 4.32864415707903 4.07808186448044 0.248698606445819 0.250309107090171 0.258816872974463 0.245394975646207 0.245619337820057 0.249295854152773 0.245394975646207 0.250340736427585 0.248659154350705 0.245394975646207 0.245394975646207 0.245394975646207 0.255853114939361 0.245394975646207 0.254142908096959 0.25358526481655 0.247982599965196 0.249991798512242 0.247614876161107 5 5|0 +|/ 1572981 1574267 1573806.75 1571233 1574580 + gene protein_coding_gene TRUE TRUE AT5G05310.1|AT5G05310.2|AT5G05310.3 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96262.1); similar to Os12g0112300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065973.1) 1.00419017267092 5.92843124325233 0.000115821360088453 0.00226202202080832 9.5475231105426 8.90186163732605 1.00419017267092 0.243399636908079 AT5G66000_at 3.45730122180723 3.81217668146033 4.1913650104618 4.40507866952565 4.66911374009438 4.67670133145932 4.10332137749376 4.00642674881231 4.20008842247075 4.02192388668672 4.50135610805847 4.18855450709254 4.53456743077058 4.12953119509197 4.57070228858131 4.1565224917022 4.94215029294266 4.66363288572104 3.83510157686139 0.216714880521559 0.217538522009743 0.22092145861313 0.223694988993887 0.221772770691557 0.228947172092811 0.221141681826569 0.231665429326314 0.230369544420168 0.219856689906186 0.215751473439037 0.218019805296744 0.219196157002420 0.215751473439037 0.221457454255269 0.215751473439037 0.227922367264678 0.220172119199600 0.229320976207493 5 5 - 26413910 26414366 26414136.818 26413693 26414726 - gene protein_coding_gene TRUE TRUE AT5G66000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35510.1); similar to Os06g0728500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058643.1) 0.541298684240347 5.92554110925251 0.000116292174062961 0.00227019453301940 9.54349762857418 8.40514315364004 0.541298684240347 0.0736359817125092 AT5G49170_at 2.25030590350541 2.77628862563546 1.19935756752835 1.24783958601179 1.6456842658272 1.25520096939927 1.81863551607633 1.73488523253809 2.99013163498604 2.38482238232984 5.02430001568157 7.18005148269261 4.11397910943685 4.86774793944726 6.56093672863584 4.4658030956346 1.75466846814184 4.07058441428137 2.69611207194849 0.272998515267121 0.271244732836604 0.280960130176464 0.282292610089425 0.276438915309311 0.283254868230348 0.271244732836604 0.272775388565206 0.277260668271216 0.273706994616942 0.272711203183539 0.27981801311643 0.277912821364713 0.283519526424612 0.281994513606983 0.271244732836604 0.276632511133263 0.274240103886990 0.271409155241890 5 5 - 19956077 19956670 19956355.182 19955802 19956797 - gene protein_coding_gene TRUE TRUE AT5G49170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06840.1) 0.628197660704348 5.92020647916005 0.000117166591756254 0.00228623508244504 9.53606402196131 5.46358184323129 0.628197660704348 0.114595596875076 AT5G63890_at 7.63473855074953 7.72996522273258 8.32416079294993 8.3269317030065 8.35053051062665 7.73407850277038 8.2206048695947 7.95327906259753 7.50223074883978 7.8426796843633 8.60881176879064 9.1770758705467 8.20004378149403 8.46317749225834 8.97759417223212 8.48341703436422 7.82030681702307 8.49719066524694 7.32867282247006 0.161263146756826 0.153464401209820 0.158170179488124 0.164645455735507 0.163354561121829 0.167989352131323 0.158728552851100 0.163471582774863 0.167670862979640 0.161386224622208 0.15930733671359 0.163609906103586 0.171229778708526 0.174645374942934 0.163961315643770 0.154728815446359 0.171454197243772 0.165271998910582 0.164991001347557 5 0|5 /|- 25582907 25583345 25583075.889 25582657 25585432 - gene protein_coding_gene TRUE TRUE AT5G63890.1|AT5G63890.2 ATHDH (HISTIDINOL DEHYDROGENASE) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. Identical to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) (HDH) [Arabidopsis Thaliana] (GB:Q9C5U8;GB:Q8LA77;GB:Q9FN00); similar to Histidinol dehydrogenase, chloroplast precursor (HDH) (GB:P24226); similar to histidinol dehydrogenase [Thlaspi goesingense] (GB:AAC83459.1); similar to Os01g0232700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042506.1); contains InterPro domain Histidinol dehydrogenase; (InterPro:IPR001692)|Identical to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) (HDH) [Arabidopsis Thaliana] (GB:Q9C5U8;GB:Q8LA77;GB:Q9FN00); similar to Histidinol dehydrogenase, chloroplast precursor (HDH) (GB:P24226); similar to histidinol dehydrogenase [Thlaspi goesingense] (GB:AAC83459.1); similar to Os01g0232700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042506.1); contains InterPro domain Histidinol dehydrogenase, prokaryotic; (InterPro:IPR012131); contains InterPro domain Histidinol dehydrogenase; (InterPro:IPR001692) 0.634934782969951 5.9184403605675 0.000117457629961608 0.00229088301951815 9.53360204640585 16.0774427946129 0.634934782969951 0.117441780388959 AT5G65240_at 3.90380298937454 4.1918519107423 4.98576730682798 5.63909996526216 5.7039817307208 4.23114774598529 3.39243199261403 3.27676615855212 3.40167342456572 3.57427413656412 4.68246019905514 4.65680138792637 4.09507963967564 4.88136077775563 4.06233783147312 4.9327319826152 4.47363274816715 4.56753455663924 4.19879873848803 0.235758833671573 0.235758833671573 0.243071828694750 0.241091564820613 0.251602520640925 0.252760767868373 0.240156135400828 0.238934777055319 0.240407456271517 0.238248015979240 0.235758833671573 0.239911321791184 0.244837054853507 0.240113811372483 0.244120171779928 0.238565763064878 0.242565611136788 0.235758833671573 0.235782916100041 5 5 - 26092376 26092841 26092620.818 26092206 26094876 - gene protein_coding_gene TRUE TRUE AT5G65240.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10290.1); similar to 4D11_24 [Brassica rapa subsp. pekinensis] (GB:AAZ67538.1); similar to putative receptor-like kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07247.1); similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98429.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.13393144079289 5.91283245763962 0.000118386892463007 0.00230796904882739 9.52578145819256 8.5500601368196 1.13393144079289 0.283959147257704 AT5G40640_at 3.17319755008585 2.98516053265722 3.73677106044498 3.80765336055774 4.20375612082217 3.41159682918209 3.28768471958346 3.37650173790687 2.79527775179742 3.05159238617214 3.69766949331677 3.71858399897204 3.55304185670052 3.83974466759614 3.58060801525497 4.12114215378583 3.67704678274194 3.61506885377907 2.89502742486349 0.216073225485637 0.223887161705345 0.224271035777012 0.222843823957364 0.224832149478684 0.221044671325443 0.228344028786177 0.228944169607736 0.234480201078268 0.231307724932823 0.216073225485637 0.216073225485637 0.218786368006393 0.222731454009610 0.217228559156515 0.222686970938085 0.230619541518711 0.229818639439052 0.219423093276880 5 5|0 +|/ 16296712 16297341 16296951.5 16294270 16297652 + gene protein_coding_gene TRUE TRUE AT5G40640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27390.1); similar to Steroid nuclear receptor, ligand-binding [Medicago truncatula] (GB:ABD28762.1); contains domain Ribosome inactivating proteins (RIP) (SSF56371) 0.697852790592063 5.90934960953078 0.000118967977308208 0.00231825499842176 9.5209219847766 6.8174547799281 0.697852790592063 0.142261778257855 AT5G13950_at 8.54805775985167 8.63295331525703 9.218664404395 9.10758188892502 9.63978053620813 9.23253715300608 8.64204350368261 8.61167038383233 8.8785866775444 8.6519665950811 9.46538927694856 9.37821784442863 9.29372691984054 9.34283337469712 8.96557218135737 9.33371637640593 8.93494496014058 8.93225162588046 8.91094346261332 0.115169731262722 0.114459690218842 0.117827239560807 0.115023909608913 0.113093827462126 0.120826659469090 0.115749971702743 0.118354246028670 0.131346311759969 0.126717354415223 0.116129741647518 0.113016461190167 0.116343297103278 0.122956625287943 0.121965144969891 0.114110415145173 0.123081892317991 0.120216209315278 0.119980108418015 5 5 - 4496237 4496773 4496509.909 4495973 4500683 - gene protein_coding_gene TRUE TRUE AT5G13950.1|AT5G13950.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45830.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84162.1); contains domain NFRKB-RELATED (PTHR13052); contains domain NFRKB (PTHR13052:SF1) 0.541479539930219 5.90648306500425 0.000119448525774815 0.00232657349657137 9.51692102659521 17.9639930256657 0.541479539930219 0.0746979546663531 AT5G45500_at 10.2071113736644 10.3829338676944 10.4876963209233 10.5605101102806 10.2101437418125 10.2528356193622 8.82188137901488 9.15866128854073 10.0906195174335 9.2806746142065 10.0601575780754 10.0099989473970 9.76957701460575 9.9254975928794 9.49131166960681 10.0063494977694 9.86927868774906 10.0298001515772 9.34977443537785 0.0946647252136557 0.0951177427555218 0.0980410113793417 0.095842050267449 0.0913793414599582 0.0972769410562227 0.0982080392211256 0.102864676883725 0.0954818028190975 0.0975396495368286 0.0913793414599582 0.0923373706920853 0.0989483989258445 0.095097903554589 0.0994207514799628 0.0941693173266067 0.0981308378744638 0.0973366870442562 0.0995526020132704 5 5 - 18449880 18450386 18450118 18449685 18451475 - gene protein_coding_gene TRUE TRUE AT5G45500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45520.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN08222.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97474.1); similar to Os01g0799000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044526.1); contains domain no description (G3D.3.80.10.10); contains domain L domain-like (SSF52058) 0.528353170492162 5.90357240831813 0.00011993859428994 0.00233506986879829 9.51285721709251 19.7446896700600 0.528353170492162 0.0673488868643968 AT5G60940_at 6.94831652441216 6.50538695308043 7.24219468622401 6.92252572687372 7.87589243761763 7.25089716234721 6.63817742834989 5.81331639415681 6.90997674269554 6.14464534976602 7.7275915128661 7.55831498816899 6.92581612972525 7.41527872899097 7.78722279492885 7.35572576327557 7.1477022479202 7.38206736722329 6.49510505031206 0.197421844262352 0.185855036058436 0.181872639738639 0.189158292738733 0.187628524430442 0.192472822131661 0.189681070343697 0.193387656230437 0.196175345595779 0.190281090155093 0.185330832652501 0.186906862035453 0.193663885283217 0.187296618185737 0.192216551292780 0.183410254249296 0.184770420489018 0.187772636654361 0.184811752734337 5 0|5 /|+ 24542032 24542799 24542315.2 24540204 24543038 + gene protein_coding_gene TRUE TRUE AT5G60940.1|AT5G60940.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to Os03g0754900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051309.1); similar to 36I5.2 [Oryza sativa (japonica cultivar-group)] (GB:AAG45490.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046)|similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative cleavage stimulation factor subunit 1 [Sorghum bicolor] (GB:AAM47578.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.871233702822676 5.90092736064826 0.000120385807546222 0.00234244574549709 9.50916312584407 13.8641087420804 0.871233702822676 0.202510166852450 AT5G26960_at 6.10157408186563 6.0107074124633 6.07188758788209 6.30211669437678 6.56143307039784 6.25691028891193 5.62331893029519 5.5407574514572 6.46327661662146 5.76699502546405 6.4569867273751 6.67674715689008 6.69978374730264 6.45139402534805 6.70871033895727 7.07148253102636 6.47289177720688 6.49084954160046 5.90308693357408 0.212502117064850 0.210193880320850 0.218143624714306 0.212742189718651 0.217407665004007 0.213192671373798 0.218940764149827 0.228106252074263 0.219684700345475 0.212277976377205 0.225821890238173 0.210193880320850 0.217030099232197 0.214888914218755 0.214961874390617 0.216182746185160 0.224518392039126 0.214427845455636 0.216340280160155 5 5 - 9484933 9485440 9485188.909 9484737 9486152 - gene protein_coding_gene TRUE TRUE AT5G26960.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67480.2); similar to Kelch motif family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95749.1); similar to Os11g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065701.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.531575156765995 5.90069309290672 0.000120425502417087 0.00234244574549709 9.50883589451225 12.3951174843395 0.531575156765995 0.0693974480601938 AT5G56320_at 2.35897521524360 2.43711863723075 3.14711382189371 2.96090089341814 2.39613496877427 2.67811178054278 2.74031307919809 2.68761804850819 2.22705505262038 1.97340687885982 2.63930401225611 2.55268162783036 2.71434715575788 3.06674669779238 2.60286758933828 2.79345543926468 3.54114372019961 2.54510646255877 1.83640189403273 0.215052191814556 0.220463222280195 0.217226206235788 0.221684712040129 0.215617548397516 0.223872925078903 0.221291890208218 0.222215081632812 0.227186326963951 0.221739849299712 0.220080361624974 0.220674340838258 0.219101110070840 0.215003193490959 0.221862882110022 0.225454940651414 0.230891436756414 0.217249107624386 0.225369055908647 5 5|0 +|/ 22826457 22827107 22826767.3 22825867 22827463 + gene protein_coding_gene TRUE TRUE AT5G56320.1 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A14 precursor (AtEXPA14) (Alpha-expansin-14) (At-EXP14) (AtEx14) (Ath-ExpAlpha-1.5) (EXPA14) [Arabidopsis Thaliana] (GB:Q9FMA0;GB:Q0WLD1;GB:Q8L9W7); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to expansin [Pyrus communis] (GB:BAC67191.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) 0.517113883699593 5.89752796970527 0.000120963182720407 0.00235184927111037 9.50441394676528 5.08540807058239 0.517113883699593 0.0607097213931474 AT5G35100_at 7.44631547945753 7.90683036694847 8.1580428794737 8.22004026138075 8.19837513490863 8.685844395509 7.34357926542444 8.29210486510488 8.34380828501081 7.90111124794314 9.30790385493127 9.27767011024212 9.08134569396845 9.34305219582482 9.28595926839341 9.41267297226329 8.55658508579787 9.13891072608277 7.78529122150697 0.166869801859999 0.164651518606835 0.177438626492138 0.165002856149463 0.166852463877615 0.174054964468917 0.17615052476662 0.165932017241051 0.171266390046979 0.172110482056006 0.168225513902011 0.165221079049124 0.168440222153151 0.168146090292357 0.167040051642437 0.162578498772565 0.184926339606467 0.167790189032886 0.170644394766067 5 5 - 13377704 13378320 13378101.182 13377513 13378620 - gene protein_coding_gene TRUE TRUE AT5G35100.1|AT5G35100.2 peptidyl-prolyl cis-trans isomerase| similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT1G74070.1); similar to Cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL51850.1); similar to Os08g0292600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061466.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130)|similar to CYP5 (cyclophilin 5) [Arabidopsis thaliana] (TAIR:AT2G29960.2); similar to Cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL51850.1); similar to Os08g0292600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061466.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) 0.866905205267608 5.89638335469504 0.000121158257692159 0.00235458618443669 9.5028144454953 16.6241829509884 0.866905205267608 0.201312842141129 AT5G62550_at 1.93774308867055 2.22735961883274 2.23171117466433 2.49987403232198 1.98177110647413 1.99232859510578 1.98370477358437 1.83792863984538 1.93933539675658 2.31121535784131 3.1309668802574 3.85734208635764 2.77098988665663 3.15522625163344 4.09407759441230 2.78887293800232 2.32806899130039 2.88736596547582 2.4511144675983 0.178335538316681 0.179506186463723 0.179814066476289 0.185993549576736 0.181964878998505 0.191936454184182 0.181513099162745 0.194552390487911 0.181187581017235 0.184450251579469 0.187138410762099 0.205045667917107 0.181292081328396 0.183418993269136 0.205524283030058 0.185316910440546 0.187845424769290 0.186599191108019 0.176941621893465 5 5 - 25123364 25123749 25123536.636 25122803 25125177 - gene protein_coding_gene TRUE TRUE AT5G62550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to unnamed protein product; gene_id:K19B1.16 unknown protein-related [Medicago truncatula] (GB:ABE84483.1) 0.536231306885779 5.8856810778502 0.00012299859638152 0.00238928032903712 9.4878492602057 4.76680374451777 0.536231306885779 0.0728375535724408 AT5G01840_at 3.09063406350586 2.87743653699387 3.50454588163086 3.53316981693078 3.68649850392225 3.63720980594262 3.24316383332672 3.63520787827394 3.12009618268768 3.4556422071749 3.85728638306397 3.98522459765030 3.87672825442425 3.67203952763195 4.16010997239228 3.48624600972913 4.41756265239896 3.78764550797188 3.0068550435852 0.190991351070652 0.194599135020549 0.187807719641033 0.186161208498841 0.186234565905126 0.191693513690792 0.195574617768764 0.184912236348043 0.194406311657855 0.193423725761144 0.192938436455729 0.185313827872049 0.197415378995949 0.193125522581979 0.184912236348043 0.184912236348043 0.192525281603180 0.190731130240345 0.187884704384515 5 5 + 324817 325257 325038.364 324549 325513 + gene protein_coding_gene TRUE TRUE AT5G01840.1 ATOFP1/OFP1 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1); protein binding Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. similar to ATOFP2/OFP2 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G30400.1); similar to ovate family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87078.1); similar to Os05g0477200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055838.1); similar to Os05g0324600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055201.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) 0.544951488045052 5.88098518221694 0.000123815507987876 0.00240407196029798 9.48127738844257 6.95075987721941 0.544951488045052 0.0778554495751857 AT5G19140_at 13.4203073271959 13.5977657927329 14.0006013085614 14.0181672118770 14.0310827878716 13.9986959693857 13.3410519437145 13.3448569803375 13.4579551452925 13.2358090978217 13.7303473788618 13.4045009102366 13.9090953915520 13.8778482430999 13.1411796363425 13.7272430600778 13.5849287342310 13.6943384409417 13.0897736947863 0.0698402699199226 0.0678293663763502 0.069354296142054 0.0673725077768 0.0692766738970036 0.0696916133769039 0.069167388474811 0.0673781784193992 0.068120511009333 0.0701398049769552 0.0687000663994428 0.0676966775469215 0.0704284118898979 0.0676467769592324 0.0680393826586116 0.0676382595575631 0.0689799789978996 0.0690730519856901 0.0685132430297088 5 5|0 +|/ 6423510 6425222 6424612.333 6423155 6426168 + gene protein_coding_gene TRUE TRUE AT5G19140.1|AT5G19140.2 auxin/aluminum-responsive protein, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43830.1); similar to aluminum-induced [Brassica napus] (GB:BAA25999.1); contains domain ASPARAGINE SYNTHETASE (PTHR11772); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.479323610106579 5.87031539178956 0.000125693304262944 0.00243787101289955 9.46633258203935 27.1664984337353 0.479323610106579 0.0313718333831799 AT5G25110_at 2.44191726188389 2.42561554699711 2.64656010261638 2.81916011757337 3.82700289073738 3.37468872150126 2.31204072604932 1.97112943870942 2.51777628228864 2.33116547055086 2.60975168536146 2.14704623343329 2.95064608377793 2.94601322898642 2.67759593741206 2.49003872572601 2.72827128192367 2.45007106857498 2.09444452353687 0.207341835511258 0.202649395942416 0.208286320850882 0.203534733499011 0.204562259275491 0.21223384133237 0.209296121723487 0.199738344688202 0.216537176823953 0.20536988690168 0.200729043129453 0.199738344688202 0.199738344688202 0.204069698010871 0.203640621255361 0.199738344688202 0.202180510712870 0.209923108177703 0.199738344688202 5 5 - 8657817 8658318 8658048.364 8657629 8659325 - gene protein_coding_gene TRUE TRUE AT5G25110.1 CIPK25 (CBL-INTERACTING PROTEIN KINASE 25); kinase member of AtCIPKs similar to CIPK5 (CBL-INTERACTING PROTEIN KINASE 5), kinase [Arabidopsis thaliana] (TAIR:AT5G10930.1); similar to CBL-interacting protein kinase 6 [Populus trichocarpa] (GB:ABJ91234.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.594822201610592 5.87027250852127 0.000125700912529832 0.00243787101289955 9.4662724818623 5.19696003714598 0.594822201610592 0.102506972995635 AT5G10520_at 1.79614892830517 1.85663477390276 3.07056156600981 2.77655956433775 2.04796239538126 2.12739610680752 1.20552342792723 1.56115282808709 1.75114285051096 1.85654255250139 1.84898881014031 1.95331559330819 2.05154184554593 1.82926819126732 1.90176937748385 2.19345960806441 2.00600380609456 1.74046310315596 1.60893950604177 0.214019514626622 0.210856440538079 0.214902497313979 0.216008683557485 0.217355347509601 0.210856440538079 0.215191984701253 0.211616420753679 0.234280984321999 0.215759619882786 0.220185127726244 0.218676390765377 0.219941999093812 0.215366219157309 0.215168655380608 0.213071536685371 0.227985203269621 0.213927186543729 0.222404711877149 5 5|0 -|/ 3320591 3321461 3321014.3 3320371 3322911 - gene protein_coding_gene TRUE TRUE AT5G10520.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G65530.1); similar to putative receptor protein kinase PERK1 [Oryza sativa (japonica cultivar-group)] (GB:BAD45880.1); similar to Os06g0663900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058295.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.551240620388193 5.87013719072564 0.000125724923581518 0.00243787101289955 9.46608283441372 3.89498057962846 0.551240620388193 0.0816989765218116 AT5G60430_at 4.60956691318855 3.98457155748777 6.11145350360491 4.98463450938093 6.45647298148396 5.14699527141612 3.82394266781625 2.47691799338799 3.18376619179474 3.89107167825944 4.79458577163307 4.99306222670377 4.12236810471836 4.7252599812295 4.2294531452793 5.20879911661058 4.96453918712195 4.77497550455024 3.98367331218887 0.381711215934467 0.381711215934467 0.381711215934467 0.398771175156662 0.381711215934467 0.417073682781615 0.411438127993052 0.395248190428468 0.381711215934467 0.381711215934467 0.381711215934467 0.407861774137503 0.445582765130716 0.381711215934467 0.422520414403223 0.422144473874631 0.42001211097611 0.396997606821039 0.381711215934467 5 0 / Inf -Inf NA 24318838 24320294 + gene protein_coding_gene TRUE FALSE AT5G60430.1|AT5G60430.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16650.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE80926.1); similar to Os01g0968000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045514.1); contains domain MULTIDRUG RESISTANCE PUMP (PTHR11206:SF1); contains domain MULTIDRUG RESISTANCE PUMP (PTHR11206) 1.49579963457559 5.86481201358894 0.000126673738461149 0.00245517100279544 9.45861739606897 8.90571981162674 1.49579963457559 0.394228536099824 AT5G06110_at 6.11178001161532 6.55353070108665 6.74223621191512 7.3107682830205 6.79926026373816 6.59582635347964 5.42204612083597 5.91934860462626 5.70239278672245 5.50736642474054 6.14294180729528 6.58834715452264 6.07169482328217 6.48057046798676 6.63139967830778 6.28654182944447 6.1839348675656 6.28715785023079 6.00283995054907 0.209553048849237 0.208858379509688 0.20920305206356 0.211720039330987 0.206294982027027 0.217241410158503 0.226311568217074 0.206713637777193 0.213298601984722 0.212371161271488 0.218438884566635 0.213527535321773 0.206056182960849 0.206487181366409 0.206056182960849 0.206056182960849 0.207994577237229 0.210438104727975 0.210617311678352 5 5 - 1841019 1841585 1841259.091 1840831 1843001 - gene protein_coding_gene TRUE TRUE AT5G06110.1 DNAJ heat shock N-terminal domain-containing protein / cell division protein-related similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to gonidia forming protein GlsA [Lilium lon (GB:BAC77346.1); similar to DnaJ domain, putative [Medicago truncatula] (GB:ABE90980.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.728443462161362 5.86382738874704 0.000126850011498847 0.00245748893525499 9.45723656274347 12.4676528757064 0.728443462161362 0.155467007261042 AT5G43870_at 6.08691143927731 6.25807114451416 6.90990896510964 6.83563177391103 7.91021810578988 7.25727077894125 7.61898058417511 7.29748787045818 6.98671093819798 7.05586987626077 8.11784348723354 8.2048931879132 8.39652191776972 8.0347747773219 7.68294349684074 7.85786736139431 7.61559590700118 7.87691535244462 7.15475475462727 0.170101397483818 0.164242890794824 0.173814424977243 0.173313799430575 0.166004434026908 0.173760401772724 0.163915837148512 0.163712660051168 0.170519636919803 0.170087165711632 0.166000110451425 0.162220391618930 0.166295845256087 0.172426911389818 0.169325370346293 0.161193182909707 0.165300441302812 0.160638245098338 0.172084928417951 5 5|0 -|/ 17649780 17651313 17650467.2 17649573 17653138 - gene protein_coding_gene TRUE TRUE AT5G43870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14740.2); similar to Protein of unknown function DUF828, plant [Medicago truncatula] (GB:ABE80297.1); contains InterPro domain Pleckstrin-like, plant; (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant; (InterPro:IPR008546) 0.660267779646495 5.86213034153569 0.000127154442277055 0.00246228651212245 9.45485628408466 14.5414090622814 0.660267779646495 0.130022744485411 AT5G18100_at 7.89895599065601 7.77289061062853 8.31375046198252 8.17674751271996 8.92792680875486 8.261845656644 8.36299989862129 8.13259592433294 7.96960014708721 8.1906045172769 9.1567254372299 9.19147552673412 9.09342306480657 9.2036818730358 9.30516640175165 9.0965964636297 8.68284765570234 9.04062644689882 8.36313519719815 0.138717429138978 0.132753825390512 0.142527932980265 0.135286134566666 0.135578803072431 0.136800462265313 0.13709001274173 0.137333857127385 0.148921453807501 0.135223907141600 0.137513006587197 0.131680917222808 0.132652066530263 0.137029738841341 0.141264893808649 0.132315217023802 0.135648163153506 0.14113753778498 0.140659928738360 5 5|0 +|/ 5987262 5988668 5987871.125 5987189 5988887 + gene protein_coding_gene TRUE TRUE AT5G18100.1 CSD3 (COPPER/ZINC SUPEROXIDE DISMUTASE 3); copper, zinc superoxide dismutase A putative peroxisomal CuZnSOD inducible by a high-light pulse. similar to CSD1 (copper/zinc superoxide dismutase 1) [Arabidopsis thaliana] (TAIR:AT1G08830.2); similar to putative CuZn-superoxide dismutase [Populus tremula x Populus tremuloides] (GB:CAC33847.1); similar to putative CuZn-superoxide dismutase [Populus tremula x Populus tremuloides] (GB:CAC33846.2); contains InterPro domain Superoxide dismutase, copper/zinc binding; (InterPro:IPR001424) 0.650039121084252 5.8584884474589 0.000127810396620405 0.00247388385656488 9.44974667815557 16.8663463476647 0.650039121084252 0.126153452958044 AT5G26940_at 6.09953249757383 6.05442989292044 7.02400517905221 6.13234502431992 8.03490133810351 7.72158234264257 6.23211244864538 6.43769804326282 5.89074337087709 5.38530920268589 6.75464028134768 6.38079918601976 6.19628704804684 6.31223755591548 5.7894847108926 5.79174867123171 5.80188796024482 5.80454128712971 5.53382308421564 0.264417711752524 0.264981463714499 0.258129553444065 0.279732888734226 0.266743173536044 0.258363101583966 0.270342775695819 0.258129553444065 0.26681237814215 0.263528337453315 0.258129553444065 0.258129553444065 0.265729538287746 0.261683294637153 0.271141471461830 0.272064988198172 0.279550241119748 0.258625060186796 0.261102206012567 5 5 + 9481848 9482611 9482263.727 9480576 9482793 + gene protein_coding_gene TRUE TRUE AT5G26940.1|AT5G26940.2|AT5G26940.3|AT5G26940.4 exonuclease family protein similar to ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL55462.1); similar to Os03g0301400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049864.1); similar to OSJNBa0053K19.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE03499.2); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 0.761463351053152 5.85580828195661 0.000128295441448885 0.00248216422142235 9.44598509094452 12.5706984575800 0.761463351053152 0.167561808561281 AT5G62020_at 5.30471665663913 5.66780649312177 6.49250940936892 6.92075292292993 6.90322102603039 6.72425896592084 6.2435380943078 6.38139730174937 5.1537298460212 5.12587031417504 5.01731873963575 5.10185429927474 5.91299994783136 5.43380364825712 5.01587873166899 5.75542488107347 5.79973173691595 5.54832921849469 5.05793921347990 0.199991217328288 0.209663690757261 0.226835930043526 0.223540245749814 0.213243372837687 0.234863250301452 0.210208123119326 0.208828534186201 0.206564611392342 0.199920712374647 0.203495456372193 0.199995084770020 0.198754893374495 0.203918360831005 0.206335946439681 0.199896350566549 0.21853572586654 0.210102151306699 0.196642770966673 5 5 + 24933832 24934366 24934049.818 24933315 24934869 + gene protein_coding_gene TRUE TRUE AT5G62020.1 AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor B-2a (AtHsfB2a) (Heat shock factor protein 6) (HSF 6) (Heat shock transcription factor 6) (HSTF 6) (HSFB2A) [Arabidopsis Thaliana] (GB:Q9SCW4;GB:Q0WMX0); similar to AT-HSFB2B (Arabidopsis thaliana heat shock transcription factor B2B), transcription factor [Arabidopsis thaliana] (TAIR:AT4G11660.1); similar to Os08g0546800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062423.1); similar to putative heat shock factor RHSF2 [Oryza sativa (japonica cultivar-group)] (GB:BAD09238.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.598237735221651 5.85449984647318 0.000128532951109916 0.00248565021055211 9.44414831539488 11.6101154962349 0.598237735221651 0.104731578250864 AT5G45400_at 1.47333157254707 1.03193114042971 2.04457992600564 1.58955574503856 1.88900073682811 1.77957444805578 1.49555400077105 1.32285279181963 1.31876217350384 1.27714503533289 2.04541354621487 2.28526610957543 1.96159877797693 2.10710826812810 2.03777631764029 1.83507449055711 1.76146036957019 1.66311478382863 1.04526796248390 0.190381517443489 0.192113924386645 0.193869086373376 0.187933923024082 0.189706207918193 0.187453665838407 0.187049529060263 0.191571978578746 0.189002518005887 0.198910604529732 0.188462398482424 0.187377311165052 0.19254351405302 0.193849087280556 0.186611052262425 0.194269215799386 0.188992150771382 0.191785667380805 0.200633409108284 5 5 + 18418367 18418781 18418591 18416217 18418871 + gene protein_coding_gene TRUE TRUE AT5G45400.1 replication protein, putative similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT4G19130.1); similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT2G06510.1); similar to Os05g0111000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054445.1); similar to RPA 70kDa subunit [Pisum sativum] (GB:AAQ23194.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.621568431709864 5.84253161987837 0.000130727390954585 0.00252696055309072 9.42733523759412 3.16621086520860 0.621568431709864 0.115270666760732 AT5G09690_at 3.02775788884344 3.21537667551020 3.63146803924258 3.65882197811069 4.3668923397349 3.49677563662535 2.34225797633536 2.59585427384567 2.88784972946001 3.16099963503872 3.80840374714535 3.71195560641598 3.64062839955577 3.59024148029369 2.87823826306938 3.86970382402984 3.34647667647933 3.85853840788629 3.2616178942522 0.215060899334921 0.218034277673056 0.225468549350062 0.219474055464190 0.23316088354638 0.224907905262625 0.224336402370105 0.218767671712364 0.222138456311657 0.215060899334921 0.215060899334921 0.224063055226972 0.222541237747385 0.227698402709409 0.215060899334921 0.223265795628931 0.228178321498572 0.217983742823966 0.220360834459748 5 5 - 3001009 3001884 3001394.545 3000810 3003501 - gene protein_coding_gene TRUE TRUE AT5G09690.1|AT5G09690.2|AT5G09690.3|AT5G09690.4 magnesium transporter CorA-like family protein (MRS2-7) similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.1); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523)|similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.1); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain CheW-like protein; (InterPro:IPR002545); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523)|similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain CheW-like protein; (InterPro:IPR002545); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 0.738856004576929 5.8408632349795 0.000131036465728271 0.00253180620977055 9.42498973655598 6.6376567944609 0.738856004576929 0.160238078661206 AT5G57120_at 5.45445579393974 5.77806200401734 5.78185877382038 5.70953144087759 5.80633076244661 5.87067076337141 4.94184010598626 4.6139147183697 5.721375493133 5.24274163032473 6.20859980254098 6.27798956892968 5.82586283572577 6.12279457997542 6.31106953867149 6.24919080325648 5.93275051602983 5.89721332015716 5.84572851496357 0.173361405742044 0.163934884218217 0.166589461106087 0.164671642625686 0.169444417207493 0.178028161098440 0.180010149032710 0.177701364624821 0.167677907007540 0.169752116613871 0.167820868641749 0.172364962417688 0.173811405436150 0.164389100593148 0.162229877613618 0.175652280422889 0.162322729627333 0.170652113617660 0.166035987169667 5 5|0 -|/ 23140023 23140852 23140399.375 23139766 23141739 - gene protein_coding_gene TRUE TRUE AT5G57120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60030.1); similar to BRI1-KD interacting protein 132 [Oryza sativa (japonica cultivar-group)] (GB:BAD11359.1); similar to Os12g0613500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067264.1); contains InterPro domain SRP40, C-terminal; (InterPro:IPR007718); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 0.547465885368911 5.8346268128022 0.000132198723271661 0.00255312488088043 9.41621848742624 11.3478159204209 0.547465885368911 0.081469408166368 AT5G56290_at 9.54403261284826 9.58255963844613 10.1435203484515 10.1584947578778 10.2441673058045 10.1293140620572 9.66824548884336 9.64054118063176 9.56769965240677 9.62853676092254 9.8675181465986 9.90581809278824 9.9711612320503 9.97938573424827 9.84383511603546 10.1952869447735 10.2166098329119 10.0272844635192 9.67276303629373 0.0808428828247765 0.0778751041268428 0.0821847107559802 0.0804395285217678 0.0825550515674433 0.0766348415598028 0.0806658335631713 0.0786088090100344 0.0871417140550817 0.0793180424124236 0.0773770350161108 0.0769000392054659 0.0796174224667303 0.0811242960282385 0.0798514767493704 0.0779360640125417 0.0783865066937952 0.0783338161460626 0.0796254104335069 5 5|0 +|/ 22808320 22809159 22808657.3 22803732 22809387 + gene protein_coding_gene TRUE TRUE AT5G56290.1 PEX5 (PEROXIN 5); peroxisome targeting signal-1 binding Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions. similar to SPY (SPINDLY), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11540.1); similar to peroxisomal import receptor PTS1 [Brassica napus] (GB:ABB92565.1); similar to peroxisomal targeting signal-1 receptor [Citrullus lanatus] (GB:AAC97489.1); similar to peroxisomal targeting signal 1 receptor; PTS1 receptor; Pex5p [Nicotiana tabacum] (GB:AAC69177.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.468946008590021 5.82895687203448 0.00013326497549515 0.00257257126419881 9.40823880978841 19.7007905553234 0.468946008590021 0.0216611361561041 AT5G24510_at 1.15361524871032 1.39138143588278 1.80277867820063 2.19105286477681 1.93805081086511 2.01078848134142 1.52514971786932 1.16801869554815 1.30112622038985 1.05340442853766 1.63988868626682 1.65038523312287 1.43895758327543 1.64295744718794 1.85036824229735 1.84552742419353 1.61068004475065 1.83951466287710 1.223726555443 0.198448337397457 0.206769481912112 0.214743881387967 0.194913308247406 0.192086884603874 0.209175748552194 0.191455565565754 0.201090514411988 0.198797044559673 0.194045327456084 0.193240593203262 0.195965066468581 0.194101808783128 0.196679378838492 0.193456846993099 0.191455565565754 0.199646896650159 0.193145355034520 0.195455391265435 5 5|0 -|/ 8369441 8369813 8369559.333 8369298 8369869 - gene protein_coding_gene TRUE TRUE AT5G24510.1 60s acidic ribosomal protein P1, putative similar to 60S acidic ribosomal protein P1 (RPP1B) [Arabidopsis thaliana] (TAIR:AT4G00810.2); similar to ribosomal protein P1 [Triticum aestivum] (GB:AAW50990.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) 0.586579474166489 5.82351838581986 0.00013429634368885 0.00259132723081687 9.40058025543773 3.08887315012596 0.586579474166489 0.100925583721859 AT5G07370_at 8.4504446251313 8.80196468530318 9.57102730604895 9.49055250587775 9.86534616965085 9.1563473371529 9.09032717426881 8.9184990353185 8.61412128972792 8.40022952784765 9.5466392892219 9.24593859160794 9.26122276344451 9.505042478581 9.00149183848336 9.39622344459953 8.61394640926384 9.03939386876143 8.60319482515867 0.138775582910036 0.128763381053394 0.138047277760485 0.131857835850386 0.134803596033783 0.149910142877139 0.131376356556584 0.126739902957419 0.147031853129618 0.138102353574888 0.128701905732529 0.128619522082048 0.137251578129799 0.133782014493829 0.126960699011609 0.126739902957419 0.15548550861676 0.133147008253770 0.133899377102672 5 5 + 2331622 2332076 2331865.636 2330386 2332282 + gene protein_coding_gene TRUE TRUE AT5G07370.1|AT5G07370.2|AT5G07370.3|AT5G07370.4 IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA); inositol or phosphatidylinositol kinase Encodes inositol polyphosphate kinase, which phosphorylates inositol 1,4,5-triphosphate and inositol 1,3,4,5-tetrakisphosphate to generate inositol 1,3,4,5,6-pentakisphosphate similar to ATIPK2BETA (Arabidopsis thaliana inositol hexakisphosphate 2beta), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G61760.1); similar to putative inositol polyphosphate kinase [Thellun (GB:ABL11220.1); contains InterPro domain Inositol polyphosphate kinase; (InterPro:IPR005522) 0.683782452130598 5.82229158167469 0.000134530175335175 0.00259468441775269 9.39885202713 18.0382732130475 0.683782452130598 0.140829371860773 AT5G14460_at 7.97434172753395 7.89409740997689 8.25412272882128 8.33791309793717 8.67083809611464 8.3631743029623 8.02377502928727 8.15642955236933 7.88278844235514 7.85712682193305 8.3389481858467 8.70909197011865 8.39415381915683 8.4312703563628 8.43308772992942 8.95818761815652 8.52567851193315 8.47090837058134 7.97285588082342 0.141191433601379 0.144732047591895 0.151167531885463 0.143046434888207 0.141191433601379 0.151229837842409 0.151704947495712 0.146655716753979 0.174612962920283 0.147182495815183 0.157309998739746 0.143121250939267 0.141191433601379 0.141191433601379 0.150836590616967 0.148899984805874 0.162737819838481 0.163216565721025 0.143160696772775 5 5|0 -|/ 4660527 4661301 4661055.333 4660062 4662671 - gene protein_coding_gene TRUE TRUE AT5G14460.1 pseudouridylate synthase TruB family protein similar to NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) [Arabidopsis thaliana] (TAIR:AT3G57150.1); similar to putative tRNA synthase [Oryza sativa (japonica cultivar-group)] (GB:AAU44133.1); similar to Os05g0108000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054428.1); similar to putative tRNA synthase [Oryza sativa] (GB:AAK73131.1); contains InterPro domain tRNA pseudouridine synthase B; (InterPro:IPR004510); contains InterPro domain Pseudouridylate synthase TruB, N-terminal; (InterPro:IPR002501) 0.511379949278566 5.82080993750966 0.000134813160424298 0.00259898622045424 9.3967644927995 16.4277979274410 0.511379949278566 0.0613586069105556 AT5G42680_at 5.43780440281384 5.67362711911653 5.11844738180191 5.17297315840493 5.95785444304458 5.90108653994388 5.83307198190415 6.09184012712066 6.60675770736287 5.96223369818728 7.48971800578912 7.15281235035312 7.37538904575146 7.30709365078027 7.28559622546628 7.90636240845361 7.52270159275773 8.02656768936684 6.21998388688353 0.187779758636755 0.188402032698024 0.205512466087922 0.198118998806647 0.188434379874705 0.194648238441398 0.194276842841708 0.187779758636755 0.198576799512468 0.196262435845953 0.189143001842766 0.187779758636755 0.191370529481697 0.19306362448664 0.190943493860448 0.195420741506803 0.198477230695936 0.201067183575079 0.193575353276821 5 5 + 17132009 17132559 17132258.182 17131824 17132645 + gene protein_coding_gene TRUE TRUE AT5G42680.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21990.1); similar to Os09g0463600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063406.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09202.1); contains InterPro domain Protein of unknown function DUF617, plant; (InterPro:IPR006460) 0.511896415002634 5.81367805826149 0.000136184237429105 0.00262425158134457 9.38671147043034 12.533974086886 0.511896415002634 0.0620996145917306 AT5G52380_at 3.30204282110205 3.33106035450604 4.12584583303167 3.93190329668033 4.25097875885343 4.28786637561561 3.63745430025508 3.33797426111451 3.35510327128707 3.22396462683767 3.43975495282192 3.57700392762361 3.45947871716555 3.57574290642869 3.58244055515832 3.56487259230391 3.72722463396829 3.63218119857759 3.30112534503745 0.198390101620601 0.204254257550562 0.202499104877751 0.212550604535495 0.197210395176345 0.205074962379264 0.197006936034899 0.200555157832637 0.216203799683934 0.198815447474709 0.203886261073463 0.199402045993593 0.204880762473874 0.200273051032584 0.200095828110854 0.199017306496009 0.212051035104772 0.211585228873473 0.199625956032720 5 5|0 -|/ 21278807 21280043 21279396.1 21278579 21280377 - gene protein_coding_gene TRUE TRUE AT5G52380.1 zinc knuckle (CCHC-type) family protein similar to zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] (TAIR:AT3G43590.1); similar to Os04g0555800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053520.1); similar to putative actin depolymerizing factor [Sorghum bicolor] (GB:AAT42170.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.511727659793047 5.80864184813523 0.000137161404704552 0.00264073414151398 9.37960779526518 7.2072583417582 0.511727659793047 0.0622767726020787 AT5G47700_at 9.88714923441364 9.9734410660387 10.0860442222266 9.96257393794916 10.0975936910737 9.94971026784868 10.1777608012822 10.0840172438389 9.85830710655105 9.69031018272542 10.9607026025176 11.2023642122949 10.2078086024900 10.6037898357780 11.2055580009778 10.458398243081 10.4512906331055 10.2186456746195 9.52799472814783 0.0867258414961472 0.0861303316596647 0.0878791426855325 0.0916374134152127 0.0877768595082244 0.086800497611896 0.0879791221189639 0.0905961254741403 0.0923990208562917 0.100638512614968 0.0907034548627196 0.088219793490119 0.0902736829069073 0.0866265450875414 0.0944490053353632 0.0861303316596647 0.0907262025770682 0.088592555547479 0.0936840955936698 5 5|0 -|/ 19345248 19345926 19345592 19345029 19346209 - gene protein_coding_gene TRUE TRUE AT5G47700.1|AT5G47700.2 60S acidic ribosomal protein P1 (RPP1C) Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1A) [Arabidopsis thaliana] (TAIR:AT1G01100.4); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) 0.482377081590558 5.80756300277812 0.000137371704286926 0.00264360909274278 9.37808555776276 20.2051731737920 0.482377081590558 0.0399709646055008 AT5G41050_at 6.19076568090309 6.35565129318522 7.0083959935276 6.7304693722956 8.21259017609444 7.62410634857875 8.15466834933305 8.17227178872534 5.93422291656587 7.27513235499624 7.87064685129092 8.32383446249154 7.94437874705862 8.02976018750462 7.9918686902784 8.10530713513284 7.4764044237098 7.31959446452743 7.2453049743485 0.19781928458852 0.186149666684364 0.186936101047944 0.199416358698682 0.186050029544015 0.200152615637799 0.186050029544015 0.193209824455443 0.197068859984351 0.192708976084865 0.186050029544015 0.186050029544015 0.189978686005448 0.187579357508718 0.190647224147864 0.188508388895642 0.186579540507388 0.204298907142563 0.192178004975274 5 5 - 16450760 16451268 16451072.455 16450545 16451546 - gene protein_coding_gene TRUE TRUE AT5G41050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26960.1); similar to Os09g0508200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063620.1); similar to Os12g0472800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066754.1) 0.620027741433245 5.80667799748953 0.000137544475890691 0.0026457596173271 9.37683669328062 14.6565871014401 0.620027741433245 0.116224415138320 AT5G06810_at 3.2021413298981 3.34631464403855 4.1393821743317 4.06184737781417 4.22148681456425 3.62125562227175 3.10678598905404 2.74565928568170 2.62329193972903 2.88871894766216 2.82516549712613 3.26300187555156 3.20894697094983 3.20145492761707 3.21061279892825 3.04724307210930 3.10571346668753 3.2923608272554 2.81372959049014 0.193159166800657 0.192563096706461 0.202380750966257 0.217679893454728 0.199134683353078 0.200721503493613 0.193881017501377 0.195731322756988 0.202226355117708 0.191877223329914 0.191877223329914 0.194615210190256 0.219428591970843 0.199192315539851 0.193929856007969 0.197142354517352 0.199988217899519 0.193802942239973 0.194580176370685 5 5 + 2111668 2112203 2111988.091 2108494 2112257 + gene protein_coding_gene TRUE TRUE AT5G06810.1 mitochondrial transcription termination factor-related / mTERF-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19650.1); similar to Os08g0518200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062250.1); similar to Os07g0409400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059441.1); contains InterPro domain RuvA-like, C-terminal; (InterPro:IPR011132); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.639916644322529 5.80454344298336 0.000137962142059876 0.00265261685566523 9.37382404959426 6.51538878245107 0.639916644322529 0.124489656600680 AT5G35580_at 3.04984345983272 3.04104682630458 4.31368193995502 4.96145113384324 2.61721242600987 3.25892205070215 1.88747862667873 1.92091837195873 2.6227228822489 1.88484540077020 2.23820631028085 1.76693307365660 2.16143542604797 2.11802418619865 2.30078234889138 1.97892451006093 2.56460345784506 2.81456668703730 1.79402335835831 0.288430545338094 0.277971923667201 0.279079232487810 0.297115819724120 0.285974610632389 0.285707687960311 0.290773655023594 0.287387409382106 0.283222213952176 0.276979202079421 0.276979202079421 0.276979202079421 0.281299673625682 0.285297645760188 0.279105127158217 0.282617168660431 0.290060977166457 0.276979202079421 0.277970984478624 5 5 + 13780342 13780951 13780629.9 13779195 13781174 + gene protein_coding_gene TRUE TRUE AT5G35580.1 kinase similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G05940.1); similar to Avr9/Cf-9 induced kinase 1 [Nicotiana tabacum] (GB:AAP03880.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.727699509655211 5.80375213242126 0.000138117321244762 0.00265442337905897 9.37270704144674 5.3030518779747 0.727699509655211 0.157906266165643 AT5G65950_at 8.7296686105198 8.84686426250565 9.13039617229828 9.25184006816092 9.28358784472895 9.17542653103822 8.50401163779043 8.45521323827032 8.7027476067774 8.88229109410144 9.31532325697269 9.28600651870988 9.09234288108047 9.08773550142331 9.13919883145188 9.36247909911863 9.26883193472618 9.19607379230938 8.93599536139169 0.113066532187242 0.113910057486814 0.123791779582729 0.119826261829749 0.112604670063216 0.113919861046388 0.120833987837307 0.118436745439733 0.135099563652033 0.114729211672585 0.111255415640255 0.111255415640255 0.119803388945085 0.117631631857719 0.114233942005983 0.111255415640255 0.115883964856869 0.115479005400722 0.111719361799364 5 5 + 26401838 26402156 26401998.364 26397349 26402447 + gene protein_coding_gene TRUE TRUE AT5G65950.1 binding similar to Os02g0714500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047920.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33026.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Protein of unknown function DUF1683, C-terminal; (InterPro:IPR012880); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.477263753167792 5.79753438963198 0.000139343156948783 0.00267679571842826 9.36392678800743 17.9515478778629 0.477263753167792 0.0357028146507193 AT5G16620_at 8.35795939905918 8.33505291060808 8.97281215147646 8.82296926010831 9.03047640803254 8.60925501028049 8.70412245372947 8.49679038995574 8.36440711233228 8.4060253748778 8.9573909912179 9.11620261021165 9.17752843759122 9.07234637569894 9.29549368052692 9.07807243968565 9.04139804873046 8.80865151219792 8.28379785571845 0.115607866517692 0.119606369665684 0.123485625719526 0.120055268635545 0.115607866517692 0.116648349559116 0.115607866517692 0.116402501452915 0.120230939820778 0.121810578361097 0.120369111901601 0.115607866517692 0.118644834422812 0.120343001406290 0.122813868016684 0.115607866517692 0.128920198967230 0.119652628196754 0.122359541649975 5 5|0 +|/ 5452548 5454232 5453446.667 5450699 5454720 + gene protein_coding_gene TRUE TRUE AT5G16620.1|AT5G16620.2 PDE120 (PIGMENT DEFECTIVE EMBRYO); heme binding chloroplast protein import (Tic40) similar to translocon Tic40 [Pisum sativum] (GB:CAB50925.1); contains InterPro domain Globin-related; (InterPro:IPR012292); contains InterPro domain Heat shock chaperonin-binding; (InterPro:IPR006636) 0.551186158404701 5.79375747943738 0.000140093452245567 0.00269001710953840 9.3585904166756 17.3760775610523 0.551186158404701 0.085376067188384 AT5G41330_at 4.58255427858816 4.78732698606405 5.4726725558373 5.33803227170716 6.88896482308329 5.52743111910694 5.30251320746697 4.29661765819259 3.72337106967081 3.31027330552159 4.3452478280386 4.71752710804998 4.88019587101387 4.57236836644064 4.31503746123031 4.79046525107706 4.77299595605733 4.61628884517661 3.14075442086526 0.222444446902844 0.222444446902844 0.225855818897610 0.225273881585564 0.235262408215022 0.230767905700492 0.225607051327209 0.224606500078966 0.231535786142440 0.225254666996587 0.222468260594823 0.222444446902844 0.225423059552323 0.228465333871666 0.225554909858379 0.222444446902844 0.233593228810848 0.233912135903393 0.227079519977315 5 5 - 16553692 16554193 16553998 16552567 16555131 - gene protein_coding_gene TRUE TRUE AT5G41330.1 potassium channel tetramerisation domain-containing protein similar to potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G09030.1); similar to BTB/POZ [Medicago truncatula] (GB:ABD28655.1); contains InterPro domain K+ channel tetramerisation; (InterPro:IPR003131); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain BTB; (InterPro:IPR000210) 1.14966086519436 5.7905856578283 0.000140726880335862 0.00270098375225053 9.3541072847226 9.28338016312486 1.14966086519436 0.296002389207430 AT5G09800_at 1.29156222976334 1.31131966646373 1.65030382158550 2.05905067712947 1.43946057805839 1.51896502306928 1.12447965388287 1.00349445162265 0.555307157309952 1.43301579906832 1.61337789543577 1.86253537917904 1.59146186806710 1.52101730505529 1.61748696537993 2.08772738942182 1.47431312870923 1.92125374076802 1.40917682471147 0.210014237837902 0.201399335309122 0.214190492925701 0.215114934825698 0.207710161499818 0.210342431660304 0.210764031515735 0.202534095378717 0.210086857222166 0.216420257244696 0.204710207663383 0.206667912770088 0.202419986470034 0.204968607809783 0.201749118760772 0.201906910853467 0.205210683300274 0.208974016856319 0.208057164476266 5 5 - 3043198 3043687 3043409.182 3043013 3044414 - gene protein_coding_gene TRUE TRUE AT5G09800.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G64660.1); similar to U box [Medicago truncatula] (GB:ABE81171.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.531438903249814 5.78875211888091 0.000141094442411976 0.00270684015736583 9.35151501272636 2.84665283071287 0.531438903249814 0.0751190258282434 AT5G65600_at 2.35661698152154 2.41225182127895 2.89127324384941 2.80999522218952 2.60110490550895 2.72890167798582 1.22619591598448 1.17684656763816 1.33649577821870 1.29714091967575 0.837918907788056 1.32521524314732 1.10749814418761 1.16044066518581 1.14455975924426 1.12535663092055 1.62744346918414 1.14669585130572 0.989808654848914 0.269874587008472 0.272999541978983 0.27837308717511 0.286825399498029 0.292749224571501 0.302363325874004 0.270745348954586 0.273477063598596 0.279036735187164 0.273644462059303 0.272253175676911 0.269874587008472 0.269874587008472 0.269874587008472 0.273317903569554 0.272992499804462 0.269874587008472 0.277769891818885 0.27629217524093 5 5 - 26233355 26233873 26233553.091 26233352 26235379 - gene protein_coding_gene TRUE TRUE AT5G65600.1 legume lectin family protein / protein kinase family protein similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G10530.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE89762.1); similar to 117M18_32 [Brassica rapa] (GB:AAZ66951.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.470708453533476 5.78643686337757 0.000141560038565562 0.0027145712946606 9.3482409510152 3.47150139272038 0.470708453533476 0.0291989557520151 AT5G19150_at 6.26395246100343 6.45778625523857 6.62703800136663 6.92996141811121 7.66378006445537 7.04231961339093 6.3932871462526 6.37900354773943 5.9698348186807 6.59504350709946 7.1724044994313 7.38794058243915 6.77581892419048 7.40093677014626 6.97717084004508 7.5546031551228 6.97882544461425 7.02042458056581 7.16430432637687 0.189190774243687 0.180549851271137 0.192106974576843 0.182490585989962 0.177225278976362 0.199299378139735 0.183572065952658 0.189166458222843 0.197605736494385 0.193357928024027 0.188641423550040 0.180004444073802 0.180795713014377 0.183671285150042 0.187067013845652 0.177225278976362 0.199212296378003 0.184631975218709 0.183043897644778 5 5|0 -|/ 6426421 6427436 6426903.143 6423307 6428469 - gene protein_coding_gene TRUE TRUE AT5G19150.1|AT5G19150.2 carbohydrate kinase family similar to PREDICTED: similar to CG10424-PA [Canis familiaris] (GB:XP_849113.1); similar to Os11g0276300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067687.1); contains InterPro domain Carbohydrate kinase; (InterPro:IPR000631) 0.637194401978121 5.78453050177551 0.000141944639011737 0.00272074310009443 9.34554450072413 13.5870959719223 0.637194401978121 0.124280631815476 AT5G24350_at 4.96354541545993 5.33927314927619 6.25808131796742 6.40777851121219 7.58549483799606 5.78658000401344 5.25526691948201 5.17888894090055 4.37833677894037 5.43332352391593 6.02011082766643 6.75228375393321 6.56799294294546 6.21091503114287 5.61057720434494 6.53966316932214 6.1123166573445 6.6068735728942 5.72209397482333 0.258749145447409 0.248828924548787 0.262567013411397 0.249412438701363 0.254834873031336 0.26445453085629 0.251666495175989 0.258311022072174 0.278099776656518 0.252845885329181 0.260173411131995 0.249384153766656 0.247759299689136 0.260169833326827 0.263867304724768 0.247447444434290 0.26606157783692 0.259259307827962 0.258962166516507 5 5 + 8310170 8310716 8310445.182 8301108 8310898 + gene protein_coding_gene TRUE TRUE AT5G24350.1 similar to hypothetical protein [Brachypodium sylvaticum] (GB:CAJ26383.1); similar to Os12g0233600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066451.1); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.22495680695347 5.78410966946134 0.000142029690527809 0.00272117034347377 9.3449491801466 11.5871185057930 1.22495680695347 0.319355432718945 AT5G07270_at 6.85997408930896 6.82583762718744 7.34686302078708 7.73214943438984 8.65500114478477 7.47803231867347 7.5699139033672 7.04728410207368 6.81858382518447 6.65107616599992 7.68336970918401 7.77452513555647 7.67800487909848 7.76656137239295 7.3854508035864 7.75694181406334 7.61019891477118 7.62753384147681 6.02145710726247 0.174513012218267 0.180023697096118 0.181827655943826 0.175852147421354 0.173349157816337 0.189030546322064 0.179134158394947 0.173619417012055 0.182643474587346 0.175998110594601 0.173815723683587 0.170647290827256 0.174030152135983 0.175007786256582 0.18012716556051 0.170647290827256 0.186442775375495 0.174168045562013 0.191765482052493 5 5 + 2282843 2283155 2283014.909 2280668 2283594 + gene protein_coding_gene TRUE TRUE AT5G07270.1 ankyrin repeat family protein similar to XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G57740.1); similar to pollen ankyrin-like protein [Lilium lon (GB:AAY26120.1); similar to pollen ankyrin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47902.2); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.945271662562527 5.77799891501422 0.000143270848770693 0.00274373746593112 9.33630168992128 14.5180631258625 0.945271662562527 0.232693116046002 AT5G24165_at 10.6920187790199 10.8944707521763 11.5602738203267 11.4974723002978 11.6245899375545 11.4765670955124 11.3360528378274 11.2982390470973 10.9537513854299 11.4602400266692 11.6748695029591 11.8204727821941 11.8493248784444 11.6559108398645 11.5659851238654 11.7880638910343 11.7248499120062 11.6318784712618 11.2750198952773 0.100157628516662 0.096066565787001 0.0963736602517995 0.0959576635602544 0.0978111429812917 0.0950095463443552 0.103804373061765 0.0984873283240958 0.105640789406351 0.0938907334912317 0.0961136113230689 0.0925914539736936 0.0925914539736936 0.0995254314692074 0.0976962689718498 0.0925914539736936 0.0986636026711817 0.100114540661064 0.0964816319571074 5 5|0 +|/ 8188634 8188921 8188815.2 8188563 8189279 + gene protein_coding_gene TRUE TRUE AT5G24165.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23885.1); similar to Os06g0530200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057777.1) 0.484389711902135 5.76167141499118 0.000146644339018854 0.00280710228940175 9.31316817015445 22.7692555017245 0.484389711902135 0.0452171261865063 AT5G22510_at 8.89241677093723 8.92521948286263 9.8504843286971 9.97891549561274 9.84973426387364 9.58541036436726 9.7019638049491 9.3839423315335 9.38689111686463 9.3775574466066 9.74920250009211 9.77426332080378 9.54227603104552 9.79882057112263 9.67621557829574 10.0689977869356 9.90502014317626 10.1025780098522 9.31739717855551 0.117578297622965 0.104950731744710 0.104038170645792 0.105734349544188 0.107659744008182 0.110136027557351 0.106517169434738 0.106970693845265 0.107542037379505 0.105245857374228 0.104878376921681 0.101340792653972 0.103104014410133 0.107773383914314 0.105888555698177 0.101340792653972 0.106811518211555 0.104855681587829 0.107346909748396 5 5|0 -|/ 7475014 7475818 7475189.375 7474813 7477944 - gene protein_coding_gene TRUE TRUE AT5G22510.1 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT1G56560.1); similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT3G05820.1); similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT3G06500.1); similar to neutral invertase [Beta vulgaris] (GB:CAD19320.1); similar to alkaline/neutral invertase [Lolium temulentum] (GB:CAA05869.1); similar to Plant neutral invertase; Glycoside transferase, six-hairpin [Medicago truncatula] (GB:ABE94613.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Plant neutral invertase; (InterPro:IPR006937) 0.528403505445151 5.75509876070523 0.000148026212453809 0.00283230398791169 9.30384422117566 19.114904350358 0.528403505445151 0.0751494463380875 AT5G26731_at 2.06088198797882 2.65593589079306 2.97068386625087 3.03088252681476 3.20422670290561 2.56546419603271 1.04595523031924 1.42821890997181 1.58417250455409 1.16606551809967 1.60010651281692 1.73019068456440 1.50168103431241 1.22510458465658 1.67076866057688 1.15746727855589 1.8910071022644 1.44147649389961 0.819677535287739 0.247215356055480 0.251479981234695 0.249924167434719 0.267509030445008 0.259690146376335 0.252576280369723 0.244622301989957 0.248509192400898 0.244622301989957 0.248268472245177 0.247351801804613 0.252459639187201 0.246880756960466 0.244622301989957 0.250892546974403 0.244622301989957 0.257177634879881 0.247360312222925 0.250126532194856 5 5 + 9295701 9295953 9295850.364 9295577 9296383 + gene protein_coding_gene TRUE TRUE AT5G26731.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05937.1); similar to At5g26741/At5g26741 [Medicago truncatula] (GB:ABE81791.1) 0.741159879771986 5.74929238269151 0.000149258556052776 0.00285462364093105 9.29560180550486 3.72887973718488 0.741159879771986 0.165251898942666 AT5G20700_at 10.0081315727306 10.5210763041610 10.8981116379033 11.2424875586871 11.0493089702370 10.9233564547664 11.1017612250954 11.2039844269785 9.92425663788157 10.5114814278625 11.1287736633725 10.9613186806411 11.3667631913196 11.0751316152158 10.6315225961947 11.2807901061168 11.5706889969659 10.6964688970584 10.1863640412817 0.0992723462240861 0.091331554803571 0.0933537839541767 0.0905320331703761 0.0910993641355114 0.0950289847056956 0.090638916325535 0.0905320331703761 0.0993865897022295 0.0937496098843268 0.093029270982394 0.0949598370380488 0.0945525107856105 0.0945865432623666 0.0981458827763228 0.091848846025851 0.099591518103202 0.0958036907761177 0.0935487168364249 5 5 - 7006182 7006804 7006548.727 7005846 7007119 - gene protein_coding_gene TRUE TRUE AT5G20700.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G74940.1); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABE90961.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 0.600571311254546 5.74862692870856 0.000149400490292130 0.00285607833508957 9.29465683372087 21.5166770625045 0.600571311254546 0.110541257757240 AT5G61190_at 5.82487290422629 5.14349872416286 5.63391184499633 5.55024596211523 4.81448936000574 4.59598546584076 3.6263400317255 3.38349581549910 5.19307942557915 4.56530308153560 5.57885536314239 6.08142310878303 4.76294329659921 5.66140704914964 5.11068112619564 5.65721860469809 4.94169304547208 6.19409464329376 4.79241579160164 0.193157130946202 0.193374868024044 0.192125621885271 0.189648139364163 0.191259325467664 0.194035370537810 0.195454747778310 0.190335176355707 0.190731727498645 0.193170996023025 0.185797720570853 0.190976089702056 0.194421075205909 0.191888493281479 0.188294193254681 0.186253260390586 0.197751266996634 0.191817024044032 0.188834785709808 5 5 + 24636422 24637071 24636764 24632706 24637279 + gene protein_coding_gene TRUE TRUE AT5G61190.1 zinc finger protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); similar to Os07g0637200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060400.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96170.1); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.651189859715341 5.74707383481287 0.000149732309938250 0.00286116017272586 9.29245111318673 9.9960078281909 0.651189859715341 0.131565713646969 AT5G58760_at 2.03241992063417 2.23321889314006 3.35776444863441 2.84482843725228 2.73552931445782 2.75679596092579 2.91380814464223 2.45931626042623 1.81036367091073 2.27007338695756 2.89152371900336 2.68293362055911 2.99469719840042 2.8076350672723 2.24868766479783 3.46323257076315 3.4221835486478 2.16034877296641 2.17496618861768 0.202331698049968 0.205358131981182 0.195656844655278 0.194895931210841 0.200414369954370 0.196908289779034 0.20102938018808 0.197676011522455 0.203626753438227 0.209747747044524 0.194584582453444 0.197305990483497 0.202727522177402 0.199599939485066 0.236773671555945 0.198136271837646 0.203651187218088 0.195254306984082 0.198026029485498 5 5|0 -|/ 23748308 23748680 23748451.5 23747726 23750924 - gene protein_coding_gene TRUE TRUE AT5G58760.1 DDB2 (DAMAGED DNA-BINDING 2); nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G80710.1); similar to UV-damaged DNA binding protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAB16450.1); similar to Os01g0141700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041985.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.631404795206436 5.74623080729828 0.000149912752975885 0.00286334622698148 9.29125368180093 5.12623001541244 0.631404795206436 0.123638894834724 AT5G66055_at 7.46958884944569 7.51394973491844 8.07812240532684 7.90286927714512 8.81656307677442 8.08982222072618 7.92324482275703 7.59063308083202 7.45909501081762 7.55956098789616 8.12370176926182 8.21944907712554 7.69685005747677 8.13723887458847 8.39491941659767 8.22500381333771 8.07789024391654 8.27920996189862 7.14318986808151 0.155080070511227 0.155164970445189 0.158728592460621 0.155097495136857 0.150849084467923 0.153140283684233 0.158355956690261 0.148452411426697 0.156878564396791 0.153028121227638 0.145308721573215 0.158127207309277 0.154953463787499 0.161944186252744 0.148707050503268 0.154683231317229 0.159640863751695 0.151247748141703 0.148184262189125 5 5|0 -|/ 26435059 26435799 26435416.125 26434382 26436490 - gene protein_coding_gene TRUE TRUE AT5G66055.1|AT5G66055.2 AKRP/EMB2036 (EMBRYO DEFECTIVE 2036); protein binding Identical to Ankyrin repeat protein, chloroplast precursor (AKRP) (AKR) [Arabidopsis Thaliana] (GB:Q05753;GB:Q8GYN6;GB:Q940Y0); similar to EMB506 (EMBRYO DEFECTIVE 506), protein binding [Arabidopsis thaliana] (TAIR:AT5G40160.1); similar to ankyrin repeat-containing protein (GB:AAA32812.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.677245534590906 5.74493825148686 0.000150189865102017 0.00286737593076204 9.28941753161675 15.6888816121776 0.677245534590906 0.141806063307497 AT5G38360_at 3.1526679853618 3.24336068791664 4.30507495497819 3.7108286410008 4.84645203222738 3.56611198668978 3.69131088229477 2.95333124788449 3.53181118707115 3.46994975480506 5.17712409576274 5.41206600699144 5.01241564035324 5.04779884349043 5.23127977507279 4.84364459854627 4.04549506166476 3.90030584567242 3.58489858033891 0.232023223780741 0.236114126025545 0.231772688832182 0.233713305412343 0.237415016305484 0.242873888440354 0.231804297889205 0.250753774697823 0.238726164658601 0.237672515853823 0.251136110446491 0.240659354795498 0.237546578676152 0.253887256737086 0.258392702687325 0.233456887574951 0.247224618776774 0.231772688832182 0.231772688832182 5 5|0 -|/ 15349638 15350632 15350043.25 15348941 15350855 - gene protein_coding_gene TRUE TRUE AT5G38360.1 catalytic similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G33990.1); similar to SP1L1 (SPIRAL1-LIKE1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G26360.1); similar to OSJNBa0072D21.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD40743.2); similar to hydrolase or acyltransferase, alpha/beta hydrolase superfamily [Leptospira interrogans serovar Lai str. 56601] (GB:NP_712682.1); similar to hypothetical protein LIC11465 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] (GB:YP_001426.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 1.07591446444942 5.74190396288734 0.000150842541208559 0.00287856907644489 9.28510614383321 7.86496867271888 1.07591446444942 0.276088007940269 AT5G25800_at 4.30683099336052 4.37608627667933 5.09477499524539 5.00651233560526 4.86441141271384 4.84799988493538 3.99571305243571 4.55434280862481 3.18867879861767 3.21895238041915 3.97177733959949 3.92763476642437 3.85437281698539 3.67202856491502 3.9407462479834 4.1841374181311 3.72166546264894 3.821792592034 3.74958926225191 0.245725574484775 0.241163268437505 0.243112228110578 0.240891515680645 0.245082797645067 0.245381266577098 0.240568183177072 0.245100815243437 0.253204196983929 0.241101321761328 0.245179117084575 0.239062647704219 0.240165566948352 0.245150053565794 0.244544216112665 0.246826288559906 0.239470334368066 0.247562693954864 0.242557003334395 5 5 - 8979778 8980476 8980171.8 8979625 8982876 - gene protein_coding_gene TRUE TRUE AT5G25800.1 exonuclease family protein similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to exonuclease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96019.2); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 0.573105314171924 5.73862350172615 0.000151551579217286 0.00289082746959518 9.2804433854091 8.26708874404326 0.573105314171924 0.0986446701198094 AT5G42060_at 3.08236552894897 3.31921657799161 3.43734045038828 3.95190644143304 3.95221125039394 3.73621335124147 3.61469721957549 3.43240265295292 3.74807109848925 3.60324155556829 4.86493916194587 4.71196453125209 4.36437152942768 4.50360117283885 4.2685911355785 4.11755072126672 4.09964686274784 4.2471867005037 3.47931912293012 0.166447443675406 0.165228784239959 0.183764236686730 0.163166115842899 0.166888741140362 0.164119965480153 0.176938602713203 0.165837739992247 0.167941806941504 0.164413269415187 0.160809165582319 0.163892960718129 0.15986785519683 0.161998297063513 0.159850848892867 0.161903316885704 0.158994891624692 0.168883859211143 0.163633129015502 5 5 - 16835881 16836096 16835969.273 16835616 16836183 - gene protein_coding_gene TRUE TRUE AT5G42060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64490.1) 0.597134131556436 5.73736396126914 0.000151824761152029 0.00289476483722159 9.27865267077925 7.5695152187529 0.597134131556436 0.109553714355332 AT5G11280_at 8.13236536555898 8.4362638329166 8.74755937457022 8.81032990311469 8.59037548274915 8.7658967440668 7.39746267506384 7.9860830167856 7.925598960694 7.43339413329712 8.3411810315573 8.11497760535936 8.41160283291842 8.4154727657484 8.15671250969014 8.14761437707311 7.31910390053543 8.02767511969149 7.49876976054196 0.159856085462219 0.157826655216404 0.159643316962874 0.159671063177839 0.161696722685549 0.174688646444143 0.172540852687274 0.159779607496980 0.164183201694269 0.155228914629108 0.155236060627746 0.152378459306423 0.159518076265732 0.153975623275359 0.166832483816024 0.154476003514924 0.180442734180333 0.163967415288037 0.168549636486493 5 5|0 +|/ 3597364 3598226 3597850.4 3597248 3598522 + gene protein_coding_gene TRUE TRUE AT5G11280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80200.1); similar to Ankyrin [Medicago truncatula] (GB:ABE78998.1) 0.619017443260655 5.73345851889955 0.000152675162595362 0.00290969945408821 9.27309867764085 16.2263154506863 0.619017443260655 0.119090787673747 AT5G50970_at 2.2852484438234 2.15161130149641 3.15116164006223 3.04569097824229 4.07738921026652 2.94195787705629 3.04743874813052 2.64137995052719 1.55138223249949 1.22170776074204 2.34537701394501 2.41281106905146 2.94332492451465 2.80231542795918 2.7206672520295 2.49490617064952 2.57071183403108 2.24056985966820 2.01849437842050 0.298841542214028 0.294991051222543 0.304369728808182 0.295707388095904 0.302609223324194 0.296779762806483 0.294229502535055 0.293071446533832 0.294322710868661 0.304468685930776 0.300063316230285 0.293071446533832 0.295261870070329 0.293071446533832 0.293071446533832 0.293071446533832 0.309641600758775 0.301746896762428 0.299784700446697 5 5 + 20754013 20754355 20754129.714 20753563 20756521 + gene protein_coding_gene TRUE TRUE AT5G50970.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G19920.1); similar to WD40-like [Medicago truncatula] (GB:ABE80202.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408) 0.87088548441976 5.73178537597293 0.000153041041332438 0.00291539091938073 9.27071855882751 4.99949988596815 0.87088548441976 0.210748397133324 AT5G46280_at 3.13378680613921 2.78683902769011 3.60101108505787 3.22696295874058 2.75223804982399 2.48287284220304 3.43850740874397 3.33277874104278 2.55325124932434 2.49044107196449 4.03068812846073 5.22187688524839 3.06181500642622 3.76978332543494 5.14718237855251 3.01567121587637 3.39041184666385 3.36076560690789 2.63897561625285 0.218110488640515 0.216066867069731 0.222021194659001 0.21735255000266 0.228982504663268 0.221729172415074 0.225311501384211 0.215604157746063 0.216898778309681 0.225164038118638 0.217665923404125 0.229186448309801 0.221480641055954 0.220273220981667 0.225794657976692 0.215604157746063 0.228987541111726 0.226463738959519 0.223819035424528 5 0|5 /|- 18787298 18787935 18787549.2 18786924 18790885 - gene protein_coding_gene TRUE TRUE AT5G46280.1 DNA replication licensing factor, putative Identical to DNA replication licensing factor MCM3 homolog (Minichromosome maintenance protein 3 homolog) (MCM3) [Arabidopsis Thaliana] (GB:Q9FL33;GB:O65400); similar to PRL (PROLIFERA), ATP binding / DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT4G02060.1); similar to mini-chromosome maintenance protein MCM3 [Pisum sativum] (GB:AAN73053.2); similar to replication ori (GB:AAD48086.1); similar to MCM; Nucleic acid-binding, OB-fold [Medicago truncatula] (GB:ABE90103.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain MCM protein 3; (InterPro:IPR008046); contains InterPro domain MCM; (InterPro:IPR001208); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.57833911236741 5.72926178852041 0.000153594665953174 0.00292465232375794 9.26712783419844 6.31220642078532 0.57833911236741 0.101502266398420 AT5G10480_at 7.7076397123846 7.9426218436407 8.14428028581414 7.99039140622412 8.72456666827503 8.77358888474012 8.62612832803082 9.1525069126799 9.07723783270593 8.3458493339961 10.1874907424096 10.2194466283750 9.74287507892134 9.7415726844355 10.1396326767330 9.45927642568584 8.4616650393998 9.93171603801197 8.44028094461172 0.151979663963699 0.139262181420353 0.147799801252979 0.148367772188935 0.135394273321778 0.138773803181647 0.136546331526013 0.140159128114935 0.143704042872705 0.147312883405999 0.132348815503729 0.133510618906526 0.137471029292387 0.14277515211301 0.136395221790429 0.132348815503729 0.158341741092611 0.132348815503729 0.140731650634782 5 5|0 -|/ 3297976 3299387 3298821.125 3297805 3300152 - gene protein_coding_gene TRUE TRUE AT5G10480.1|AT5G10480.2 PAS2 (PASTICCINO 2) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59770.1); similar to Os01g0150200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042032.1); similar to protein tyrosine phosphatase [Hyacinthus orientalis] (GB:AAT08740.1); similar to Os04g0271200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052344.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59770.1); similar to Os01g0150200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042032.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); similar to Os04g0271200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052344.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482) 0.582659661277305 5.72657599332758 0.000154186226417104 0.00293462763015811 9.26330523789663 17.5610065642326 0.582659661277305 0.103598330222874 AT5G59400_at 7.92702382694162 7.77377242676396 8.81575002501934 8.80361013011568 8.35771095114032 8.10176460855095 8.83588551035953 8.45249701612552 7.28873423590304 7.49039924783762 8.63003390004687 7.73260585987518 8.0686863685198 8.1589144340049 7.99730788897767 7.58027995160715 8.27422720906105 8.84798974560145 7.26920002415422 0.125016638881318 0.122961027167607 0.127199895767067 0.12197423375291 0.125586958765618 0.127485950618059 0.122846237901497 0.12197423375291 0.132102994172173 0.134011856884748 0.122885878368444 0.125923886864301 0.126706902100226 0.126643667204902 0.125633085910812 0.124047504738624 0.133335866054337 0.12197423375291 0.126401497758163 5 5 + 23975585 23976690 23976096.182 23974963 23976933 + gene protein_coding_gene TRUE TRUE AT5G59400.1|AT5G59400.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11960.1); similar to unknown protein [Oryza sativa] (GB:AAK73156.1); contains domain DNA ligase/mRNA capping enzyme, catalytic domain (SSF56091) 0.542112700369524 5.72444634650067 0.000154657022116041 0.00294229667431522 9.26027340196103 16.1388518980488 0.542112700369524 0.0840925723743348 AT5G52520_at 9.34313915222515 9.393461274698 9.79658140288667 9.74944244763821 9.70405450665947 9.56387041121729 9.33047525956248 9.3117143196251 9.24174335802958 9.36277895262749 9.71487209766674 9.99793328678152 9.86228407056451 9.86605497473102 10.1978766241632 10.0573975523114 9.68647347152527 10.0480882992308 9.47421861521135 0.092029701523372 0.090560378397786 0.0906958508883223 0.091894274475421 0.0881657446030347 0.0936511070547953 0.0948917497606563 0.0938030956417574 0.104828801511815 0.091130834559258 0.0895120913478589 0.0909868486008407 0.0889083058903312 0.0944832405022513 0.090160216394401 0.0894157283195104 0.100081901653456 0.0876374680367482 0.095111615063144 5 5 + 21330357 21331076 21330753.909 21328289 21331406 + gene protein_coding_gene TRUE TRUE AT5G52520.1 OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT3G62120.2); similar to prolyl-tRNA synthetase [Raphanus sativus] (GB:BAC78195.1); similar to putative prolyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC79747.1); similar to Prolyl-tRNA synthetase (ISS) [Ostreococcus tauri] (GB:CAL57480.1); contains InterPro domain Prolyl-tRNA synthetase, archael and euk type; (InterPro:IPR004499); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain Prolyl-tRNA synthetase, class IIa; (InterPro:IPR002316); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195) 0.464040964535863 5.72266801107305 0.000155051330722578 0.00294850448882371 9.25774117211079 19.1683187746864 0.464040964535863 0.0272295618994775 AT5G22760_at 7.73373554301197 7.38768949608623 8.02104266710709 7.94343447163678 8.20759943521226 7.9841402287711 7.10300132730337 7.2584942396297 7.53792136667234 7.25518215986968 7.78152231858607 7.87433910220394 7.78328982694195 7.94837523249082 7.56668165814065 8.05458628501411 8.01795757526135 7.68331139121035 7.55269508431478 0.139277873494873 0.137758383214838 0.145237583474762 0.148133794543368 0.137126485084090 0.138632781176983 0.134812614473060 0.144432407262148 0.141695461982191 0.138024963405923 0.145423163709124 0.139509741544086 0.144817045988805 0.145133259485667 0.138775078367776 0.135311295884525 0.136540087383347 0.142709120055923 0.141511372445305 5 5 + 7577113 7577630 7577374.273 7571638 7577869 + gene protein_coding_gene TRUE TRUE AT5G22760.1 PHD finger family protein similar to peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein [Arabidopsis thaliana] (TAIR:AT5G35210.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92741.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DDT; (InterPro:IPR004022) 0.52924121797644 5.72094654108555 0.000155434053587226 0.00295448663877346 9.25528945317975 15.3485709064365 0.52924121797644 0.0773697503474164 AT5G48870_at 7.8738728795938 7.77240274701694 8.53680210130385 8.39271454762128 8.56670996399994 8.21365218803575 8.06942021858896 7.71908080900842 7.41296960919551 7.56272212185522 8.10743245141045 8.17388925125117 7.76686280673284 7.85527916444244 8.0445885364925 7.99254861070258 7.90684621888762 7.80694625298241 7.26535800108706 0.130095640099758 0.124440814816473 0.128965420634885 0.130051335583413 0.130240003104768 0.134792733749590 0.123967807292852 0.134370194447226 0.133678518618585 0.131150794468448 0.129206552438186 0.129628569367105 0.126077211901153 0.124729658842650 0.131490181545071 0.122659853156022 0.128373634113940 0.127756195674490 0.136233081951440 5 0|5 /|+ 19830831 19831559 19831164 19830564 19831780 + gene protein_coding_gene TRUE TRUE AT5G48870.1 SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1) SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. similar to Os05g0389300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055432.1); similar to U6 snRNA-associated Sm-like protein (ISS) [Ostreococcus tauri] (GB:CAL54562.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649) 0.555945727127498 5.71973092958651 0.000155704920099511 0.00295833831475874 9.25355790473517 15.8283231347255 0.555945727127498 0.0913172757002095 AT5G23050_at 4.28832401640031 4.87176321264579 5.71615252140068 5.45969111052449 5.93659503527764 5.8023878794655 4.75578508167625 3.98000059355840 2.94839122578584 3.52988271452145 2.94991316934749 3.15554295813264 2.99175624498596 3.26026706501157 2.85921433499507 3.72148767998635 3.86162626873435 3.86321625795126 2.69567454622439 0.270749781661695 0.267178277646468 0.273688411456356 0.275764175188285 0.271894272740377 0.269592553167647 0.269847386648483 0.270842307897596 0.27746013912588 0.268271929302234 0.271347068045471 0.27579869654079 0.267178277646468 0.269620136084797 0.267178277646468 0.267178277646468 0.270366668299758 0.273507495880074 0.273919241907898 5 5|0 -|/ 7731532 7732430 7731916.4 7731272 7735442 - gene protein_coding_gene TRUE TRUE AT5G23050.1 acyl-activating enzyme 17 (AAE17) similar to ligase [Arabidopsis thaliana] (TAIR:AT1G55320.1); similar to acyl-activating enzyme 18, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99434.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE78689.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 0.764816789573042 5.71471958164728 0.000156826899818399 0.00297726538829400 9.24641721996837 8.29676784448712 0.764816789573042 0.175292234881065 AT5G06670_at 3.07256113483876 2.92028269228338 3.15541583017477 3.55494691803681 3.71217863337855 3.68549815305265 2.90732770783270 3.20973833511874 3.69265638061502 3.22269776952857 4.18775787125428 4.98485099335132 3.89589056673327 3.83743626187433 4.86408494270161 4.20863303837373 3.21459473162323 3.74274292050692 3.60844862302041 0.203488013353386 0.198650394467027 0.203575164723181 0.208662818121186 0.203800684707061 0.196399676682464 0.200872462560710 0.199184269399811 0.199331611888817 0.195898341581756 0.197033038250185 0.198344008064412 0.193869834812183 0.198759519900042 0.194269193960346 0.195339546663734 0.206891374726959 0.200531683800326 0.19356839204953 5 5 - 2048285 2048679 2048488.5 2048244 2055020 - gene protein_coding_gene TRUE TRUE AT5G06670.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G12020.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT2G21380.1); similar to kinesin-related protein (MKRP1) [Arabidopsis thaliana] (TAIR:AT1G21730.1); similar to Kinesin, motor re (GB:ABE89527.1); similar to Kinesin heavy chain, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP54589.2); similar to kinesin motor protein 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD17149.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.554298537111648 5.71466824933953 0.000156838437075880 0.00297726538829400 9.24634405649383 7.08971026235138 0.554298537111648 0.0907469764225222 AT5G26980_at 3.2783597830003 3.2542581453822 4.14315459846702 4.27667068219938 4.44292813889865 3.67736636353389 3.04326592843451 2.88156346071874 3.5060712200826 3.6653509323976 4.18323243078961 4.06444791589011 3.93147539941779 4.01146094646227 3.8741155482206 4.21090997589135 3.89106297437466 3.99911593022232 3.9823537302684 0.208448974321446 0.207134129894488 0.210506947848292 0.208673788448771 0.204967977346111 0.226733186932949 0.214846071657018 0.210704299250919 0.219933981001385 0.216754995737980 0.207475007541418 0.219030905442594 0.218814236953635 0.216942175060250 0.224163654759004 0.210549941121786 0.215022045100380 0.219519742921075 0.204967977346111 5 5|0 -|/ 9488788 9490025 9489330.3 9488151 9490819 - gene protein_coding_gene TRUE TRUE AT5G26980.1|AT5G26980.2 SYP41 (SYNTAXIN OF PLANTS 41); t-SNARE member of SYP4 Gene Family Identical to Syntaxin-41 (AtSYP41) (AtTLG2a) (SYP41) [Arabidopsis Thaliana] (GB:O65359;GB:O04639); similar to SYP43 (syntaxin 43), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G05710.2); similar to putative syntaxin of plants 41 [Oryza sativa (japonica cultivar-group)] (GB:BAD67916.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 0.661735231149926 5.70910881455353 0.000158093336398634 0.00299977376677523 9.23841785386356 7.4940223547834 0.661735231149926 0.137427627406469 AT5G54280_at 5.01350920011258 4.67456990968059 4.83405112868751 5.00316038303502 5.53713807298991 5.48391683760237 5.20617884418641 5.04219575185959 4.64823801418363 5.35613720659405 6.30193089945766 6.79201838161008 6.3418709577306 5.884548418641 5.9144566204809 6.19629764874555 5.97638586542294 6.02589584366653 6.11500598106185 0.242481572826557 0.237582914847410 0.24285605683624 0.233805672699200 0.229999849526804 0.230126226970399 0.233544607134236 0.231673777295827 0.236075397610153 0.229999849526804 0.234695487973464 0.230609079873159 0.233970115628684 0.235117730443256 0.239023114786832 0.229999849526804 0.232191778427606 0.236624285374754 0.235732832534959 5 0|5 /|- 22056983 22057283 22057159.8 22056609 22063524 - gene protein_coding_gene TRUE TRUE AT5G54280.1|AT5G54280.2 ATM2 (ARABIDOPSIS THALIANA MYOSIN 4) Type VII myosin gene similar to ATATM (myosin 1), motor [Arabidopsis thaliana] (TAIR:AT3G19960.1); similar to VIIIB (Myosin-like protein VIIB), motor [Arabidopsis thaliana] (TAIR:AT4G27370.1); similar to VIIIA (Myosin-like protein VIIA), motor [Arabidopsis thaliana] (TAIR:AT1G50360.1); similar to myosin VIII ZMM3 [Zea mays] (GB:AAD31926.1); similar to IQ calmodulin-binding re (GB:ABE84244.1); similar to putative myosin [Oryza sativa] (GB:AAL31066.1); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048)|similar to ATATM (myosin 1), motor [Arabidopsis thaliana] (TAIR:AT3G19960.1); similar to VIIIB (Myosin-like protein VIIB), motor [Arabidopsis thaliana] (TAIR:AT4G27370.1); similar to VIIIA (Myosin-like protein VIIA), motor [Arabidopsis thaliana] (TAIR:AT1G50360.1); similar to myosin subfamily VIII heavy chain [Petroselinum crispum] (GB:AAG49341.1); similar to IQ calmodulin-binding re (GB:ABE84244.1); similar to putative myosin [Oryza sativa] (GB:AAL31066.1); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.518250845654233 5.70371440677159 0.000159321240431523 0.00302175044940845 9.23072240511749 10.8754913393939 0.518250845654233 0.0720208389105225 AT5G03420_at 6.89978450722511 6.82982637000395 7.70847870015441 7.38632664122063 7.82361951235044 7.42399648232332 7.30357095890328 6.82732295763043 6.95635171561719 6.86233995736878 7.38189231992038 7.44505420090204 7.11305411725634 7.48926505804565 7.60399623960075 7.60160633508162 7.46862168578328 7.45150791991192 6.64273094767315 0.148377610561171 0.152826411044603 0.153376808483278 0.152582567115934 0.156194267186145 0.159006351810397 0.148377610561171 0.163713868926093 0.172108271010459 0.160922786431083 0.148377610561171 0.150860044611120 0.154379403198628 0.151643631339163 0.159107725595072 0.155321553823416 0.154226257790051 0.167298503162885 0.154062801825152 5 5|0 +|/ 847252 848574 848185.556 845640 848601 + gene protein_coding_gene TRUE TRUE AT5G03420.1 dentin sialophosphoprotein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to Dentin sialophosphoprotein precursor (Dentin matrix protein 3) (DMP-3) [Macaca mulatta] (GB:XP_001098430.1) 0.622189831623942 5.70329771146881 0.000159416513696955 0.00302223537759486 9.23012777849311 14.407790236951 0.622189831623942 0.121777721552645 AT5G08130_at 7.32352167969453 7.67395117192575 7.11061289311707 7.3796708196075 8.49251863176373 7.97301345355177 7.15240680007525 7.13586782109819 7.98734404270546 6.89341486460097 8.4580630930266 8.57747605672826 8.41052572052648 7.88201558419 8.67508261751682 8.34118511283054 7.43219805161765 7.95001472284533 7.34037431530006 0.186049790120319 0.182669895320122 0.190220396510000 0.185922927908524 0.182465088628153 0.182105571029890 0.193283997940314 0.181365986193888 0.185468459691521 0.196764381105658 0.176837705331371 0.178017533569928 0.177187755592701 0.191943311924741 0.182548681472870 0.176298479042609 0.198806279638802 0.180890805547735 0.178632973421453 5 5 - 2606656 2607532 2607094.364 2606201 2609607 - gene protein_coding_gene TRUE TRUE AT5G08130.1 BIM1 (BES1-interacting Myc-like protein 1); DNA binding / transcription factor Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Identical to Transcription factor BIM1 (BES1-interacting Myc-like protein 1) (Transcription factor EN 126) (Basic helix-loop-helix protein 46) (bHLH 46) (AtbHLH046) (BIM1) [Arabidopsis Thaliana] (GB:Q9LEZ3); similar to BIM2 (BES1-INTERACTING MYC-LIKE PROTEIN 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69010.1); similar to Os08g0490000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062109.1); similar to Putative bHLH family protein [Brassica oleracea] (GB:AAV25873.1); similar to Os09g0475400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063459.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.613146396843156 5.7018973049488 0.000159737148913837 0.0030269904506343 9.22812919519114 15.3416276725771 0.613146396843156 0.118052225110342 AT5G63840_at 8.92379516012569 9.26086846706842 9.58439509437587 9.60365696579139 9.79188433804334 9.18405590942335 9.103208219125 9.02250169392735 8.47895013810084 8.8480800966804 9.42115475980045 9.83173286417166 9.46795448666381 9.47327471856329 9.57377556844915 9.6407264082103 9.20093686151997 9.48667371463392 8.879724217592 0.120708109791488 0.117639011697588 0.123491159455158 0.120055812435402 0.116795552329741 0.126966555931296 0.117259295904213 0.116795552329741 0.135662127147135 0.120179151234073 0.118300441644408 0.116795552329741 0.117749659351591 0.124018561905948 0.117414774938518 0.117008282954015 0.129775368201064 0.127984306262338 0.121659528021764 5 5 + 25565439 25566091 25565823.455 25562282 25566425 + gene protein_coding_gene TRUE TRUE AT5G63840.1 RSW3 (RADIAL SWELLING 3); hydrolase, hydrolyzing O-glycosyl compounds radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme. similar to HGL1 (HETEROGLYCAN GLUCOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G23640.1); similar to alpha-glucosidase [Solanum tuberosum] (GB:CAA04707.1); similar to alpha glucosidase II [Solanum lycopersicum] (GB:CAE54480.1); similar to Glycoside hydrolase, family 31 [Medicago truncatula] (GB:ABE79280.1); contains InterPro domain Glycoside hydrolase, family 31; (InterPro:IPR000322) 0.619924273570345 5.69671517525782 0.000160929645081653 0.00304825576047703 9.22073092958727 18.4331024760897 0.619924273570345 0.121133119370180 AT5G14120_at 10.9537654726289 11.0319566596547 11.2956789724997 11.2526432464299 11.4686028733035 11.4267257845422 10.6623413015482 10.7447048392224 10.8892255608457 10.9902700899769 11.5581726708556 11.2173519823368 11.3709626386206 11.2795100085621 10.7064362349598 11.5821574665851 11.4736557429351 11.2891118703886 10.8363334025445 0.0803895699469356 0.0794070722092382 0.0798196788770422 0.0794070722092382 0.0843294594221704 0.0843530378398357 0.0796385497508154 0.0849539332115046 0.0953460839313261 0.081705407240282 0.0804373132103972 0.0796904077731937 0.0815616028472427 0.0810841073279164 0.081631127659297 0.0794070722092382 0.0836875958660368 0.084118348210131 0.0863602317224387 5 5|0 +|/ 4557869 4558413 4558207.1 4555984 4558712 + gene protein_coding_gene TRUE TRUE AT5G14120.1 nodulin family protein similar to nodulin family protein [Arabidopsis thaliana] (TAIR:AT3G01930.2); similar to Nodulin-like; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE77921.1); similar to Os08g0532400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062339.1); similar to Os04g0388700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052632.1); contains InterPro domain Nodulin-like; (InterPro:IPR010658) 0.4585570633567 5.69566015562962 0.000161173585773523 0.00305056987400217 9.2192242267999 22.2120254827426 0.4585570633567 0.0222315496421276 AT5G15610_at 5.90456267852573 5.92186916500504 6.64734837123485 6.42653325056297 6.91695400408171 6.73844990248436 6.347877292363 5.70150280622908 5.84645652374705 5.99530291680574 6.80033288440489 6.64887425219202 6.34317175200572 6.19104624045117 6.87561571336243 6.27488034107174 6.61894669161878 6.18845334959171 6.04199063522074 0.156740583759519 0.151778976082119 0.152104204244342 0.158933716437995 0.155602748186326 0.162827066081259 0.157967170889079 0.159351236249430 0.161390956973955 0.167771180626728 0.151778976082119 0.151778976082119 0.157567111955947 0.161740809330828 0.165473608935991 0.159153773753734 0.159653112188531 0.156170598752558 0.161629498888818 5 5|0 +|/ 5081058 5081906 5081507.6 5079516 5082208 + gene protein_coding_gene TRUE TRUE AT5G15610.1|AT5G15610.2 proteasome family protein similar to proteasome family protein [Arabidopsis thaliana] (TAIR:AT3G02200.2); similar to unknown [Solanum tuberosum] (GB:ABB29949.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.62239176219486 5.69557827574766 0.000161192534471381 0.00305056987400217 9.21910728473426 12.5525947729834 0.62239176219486 0.122211703804183 AT5G65360_at 7.03503489339387 7.3009786198894 8.03611124331369 8.16230593857554 7.19596892365608 6.72065463041814 7.8860712904964 7.74824479661135 7.27835398701109 7.62736184011968 8.7561922453361 9.20364870484174 7.50528756818625 8.29990252037213 9.38059683037668 8.37572798631793 8.03876749502893 8.08499399774056 7.14617735397644 0.199456853622285 0.184881936807985 0.187779391471599 0.186782186097356 0.181734965242209 0.189826822833473 0.185934876700592 0.184923688832846 0.193375003633235 0.197427245475767 0.179307681750965 0.178454823596445 0.185555364941546 0.185961226260143 0.194985678586587 0.178454823596445 0.188202395148503 0.204783792893422 0.194990677454472 5 5 - 26137369 26137658 26137482.545 26137085 26137807 - gene protein_coding_gene TRUE TRUE AT5G65360.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.570593196024538 5.69203262677753 0.000162015357211127 0.0030648040420662 9.21404235018363 15.4138066564914 0.570593196024538 0.0996486842572892 AT5G64990_at 1.53540639864478 1.67731190111351 2.3239585239646 2.74248981801805 2.02814753007978 2.43355219022993 1.04551734627545 1.2020064740564 1.24587016376975 1.46596938861961 1.21927609050687 1.59101520979101 1.09678606260915 1.67942350595102 1.36495580350690 1.51325399502941 1.91172632932879 1.27370232429406 1.18721415540522 0.214225553292810 0.207071363578542 0.209018515813298 0.209640536108880 0.216676837718742 0.216112270831644 0.209429055026890 0.233459658811769 0.213129665294504 0.209657030065392 0.222054636583066 0.208554615238214 0.224776970637882 0.211572253330088 0.207071363578542 0.209892704925281 0.210166486940829 0.209265418023228 0.217804807856247 5 5|0 -|/ 25980812 25981940 25981185.25 25980788 25982018 - gene protein_coding_gene TRUE TRUE AT5G64990.1 AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding similar to AtRABH1e (Arabidopsis Rab GTPase homolog H1e), GTP binding [Arabidopsis thaliana] (TAIR:AT5G10260.1); similar to 80A08_22 [Brassica rapa subsp. pekinensis] (GB:AAZ67607.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.586779665706423 5.68747746330168 0.000163079041714038 0.00308358012955817 9.2075325025513 3.25152476499382 0.586779665706423 0.107258633043638 AT5G16710_at 10.6295301110280 10.6409684127130 11.2134077317147 11.1061812960013 11.3384502723011 10.8537118592289 11.0768286371161 10.9353542643142 10.8336993556167 11.0356667942838 11.7845815389589 11.7716732692257 11.5378261996496 11.5277838347197 11.9747093663885 11.7294341677126 11.3530526510113 11.7850622152435 10.8097047321590 0.111479560750210 0.105069088443724 0.110366835871231 0.112183466995572 0.11012349897288 0.113774314039624 0.105622737572529 0.104906562696044 0.110885133180300 0.104906562696044 0.106549105553762 0.108547850729098 0.105361403163164 0.112308485959027 0.107969502747961 0.104906562696044 0.113758798766803 0.109311102682947 0.106650273447980 5 0|5 /|+ 5484090 5484860 5484445.444 5483291 5485084 + gene protein_coding_gene TRUE TRUE AT5G16710.1 DHAR3 (DEHYDROASCORBATE REDUCTASE 1); glutathione dehydrogenase (ascorbate) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1); similar to dehydroascorbate reductase [Brassica oleracea] (GB:BAD14935.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.548629605764622 5.68490193594596 0.000163683755756114 0.00309366518726527 9.20385037258314 22.2623235894106 0.548629605764622 0.0893563312536068 AT5G64050_at 4.22693975047618 4.25416848088579 4.30066181198672 3.82446395670485 3.48120638201501 3.4912200121537 3.59253351437226 3.56897595123201 4.50827654157114 4.73681129830777 5.58757408740404 6.62425143706514 5.83110946484477 5.89621798065482 6.29757954414977 5.43012989978162 5.0421899159769 4.4615121618725 4.07323255639641 0.264943308905644 0.255211970555211 0.271735519028247 0.267212601688791 0.256552983462194 0.267326931842875 0.264597546495016 0.258766786144003 0.25975373825825 0.256854329993969 0.26103867945282 0.258635153191223 0.256721276910267 0.255211970555211 0.256108200034007 0.259406325537432 0.263604539952143 0.257606892593665 0.255211970555211 5 5 - 25647435 25648324 25647783.364 25647081 25650435 - gene protein_coding_gene TRUE TRUE AT5G64050.1 ATERS/ERS/OVA3 (OVULE ABORTION 3); glutamate-tRNA ligase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Identical to Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) [Arabidopsis Thaliana] (GB:Q9FEA2;GB:Q940P6); similar to glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative [Arabidopsis thaliana] (TAIR:AT5G26710.1); similar to Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) (GB:Q43768); similar to Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) (GB:Q43794); similar to glutamyl-tRNA synthetase [Nicotiana benthamiana] (GB:AAY18610.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain Glutamyl-tRNA synthetase bacterial/mitochondrial; (InterPro:IPR004527); contains InterPro domain Class I aminoacyl-tRNA synthetase, anticodon-binding; (InterPro:IPR008925); contains InterPro domain Glutamyl-tRNA synthetase, class Ic; (InterPro:IPR000924) 0.535307022925215 5.68122543068448 0.000164551122835707 0.00310793164213931 9.19859245569004 8.88540157925855 0.535307022925215 0.0826616452413867 AT5G47410_at 5.29342916402203 5.49209397438569 6.0249154825161 6.1031245890974 5.58203286670347 6.08064406922984 4.86744146200849 5.17526697226982 5.00101008304949 4.50124773832074 4.85047038516308 5.4124187387439 5.1389807242141 5.15309332961792 5.24051707052561 5.45038977688633 5.65668257741734 5.05810717953126 4.92914822271967 0.242259581402108 0.240815948181098 0.234865082121005 0.241350723447089 0.251030255328557 0.248064652714566 0.234865082121005 0.240129780146399 0.256023355187046 0.240194456189794 0.238549982245165 0.234865082121005 0.241626570605065 0.238498370013153 0.238335804490511 0.234865082121005 0.247302758333437 0.236611036760852 0.240602053610565 5 5 + 19249443 19249760 19249609.455 19249442 19249813 + gene protein_coding_gene TRUE TRUE AT5G47410.1 similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1) 0.587617575057168 5.6810951514862 0.000164581948407458 0.00310793164213931 9.1984061001868 10.6051441495920 0.587617575057168 0.107927584032765 AT5G48910_at 5.8236200658919 6.3688393407018 6.54770091217625 6.77013848704976 6.85990302379434 6.8101506382388 6.14941996488808 6.5815847746732 6.03345083875691 6.32355897837806 7.01156392890871 7.3500580131003 6.81023533014915 7.071335129139 6.89583199797065 7.38171498012951 7.03874865812347 6.88424761329855 6.56814704994602 0.159059668994224 0.159920452902972 0.166245211729488 0.168916310728208 0.163914005032371 0.168507028787760 0.171366701238449 0.163721051526545 0.178321156392895 0.163738008680441 0.163138742754101 0.165742181196673 0.167055557295902 0.162648355984726 0.16463191033506 0.162480217047091 0.178088746416086 0.170169320794106 0.168414958134730 5 5 - 19850203 19850727 19850478.909 19850098 19852160 - gene protein_coding_gene TRUE TRUE AT5G48910.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to Os03g0821700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051728.1); similar to putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16484.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.63159428138407 5.68032569021666 0.000164764137678912 0.00311001752959463 9.19730538526784 13.1708459402831 0.63159428138407 0.126694955716997 AT5G09410_at 9.05680514960486 8.96412720663228 9.70223010266223 9.57734787451066 10.0150290973431 9.73437304324277 9.3797187108261 9.21431512348392 9.58903760617545 9.6430116556745 10.0708247732235 10.0448300437243 9.94924573338823 9.92804667391047 9.90899411272442 10.1770082344751 9.99631041451342 10.015247429142 9.6097914922823 0.072917944845392 0.0763064849955956 0.0743849801391705 0.0742346798619762 0.072917944845392 0.0737160033987575 0.0779857742733756 0.072917944845392 0.086763278301906 0.072917944845392 0.0745798649784072 0.0730598699036993 0.0736656987707384 0.0749819972456737 0.075473252618703 0.0738550212188125 0.0741215843866322 0.0759543368924178 0.0736015436994883 5 5|0 +|/ 2926548 2927268 2926897 2921269 2927417 + gene protein_coding_gene TRUE TRUE AT5G09410.1 EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN); calmodulin binding / transcription regulator calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum) Identical to Calmodulin-binding transcription activator 1 (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (CMTA1) [Arabidopsis Thaliana] (GB:Q9FY74); similar to calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G64220.2); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.1); similar to putative calmodulin-binding transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR06369.1); similar to calmodulin-binding transcription activator [Brassica napus] (GB:AAM10969.1); similar to Putative calmodulin-binding protein similar to ER66 [Oryza sativa] (GB:AAM08530.1); contains InterPro domain CG-1; (InterPro:IPR005559); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.50043499532326 5.67712098086556 0.000165525252407984 0.00312302439622339 9.19272006968311 19.2681234610041 0.50043499532326 0.062470322192396 AT5G02650_at 3.50203127784081 3.41139344353914 4.05015895087448 3.63429839511989 3.85123962395106 3.67781508658403 3.33552722540018 3.1392040044061 3.31773320037207 2.90418321458617 3.7174453843836 4.28326394851524 3.72328897053625 3.68439458653746 3.90246915918743 3.95904227499964 3.78552466709766 3.68252394881988 3.4214190273088 0.225499427169267 0.232342805363090 0.225478848526435 0.228715974328961 0.226611430622227 0.23056147023036 0.225523809618317 0.230949005138229 0.258017110417063 0.23489655091591 0.228179959196359 0.234664309231873 0.238044632836558 0.225345619356537 0.227614794568771 0.231335085524249 0.233114468945205 0.233783279176606 0.231245133436154 5 5 + 599037 599741 599397.182 598774 599784 + gene protein_coding_gene TRUE TRUE AT5G02650.1 similar to binding [Arabidopsis thaliana] (TAIR:AT1G28260.2) 0.542068998211552 5.67531242383452 0.000165956438905873 0.00312979778080537 9.190131681274 7.10355313343046 0.542068998211552 0.0864882293468365 AT5G49720_at 10.5744176721653 10.5342285612884 10.8333161715751 10.8823060016742 10.9714789340074 11.1221763819890 10.6755580263492 11.0063598210270 11.2427127492227 11.0006315217520 12.12968019425 12.0151833499160 11.8523547466688 11.9032288107385 11.8769936390384 11.8040870057384 11.5194391742037 11.8398782734690 11.1182725209660 0.0688421284785452 0.0676586339316422 0.0673524994364297 0.0699981515409146 0.0689843124694936 0.0723616948735049 0.0673524255985852 0.0702317779054888 0.0717053975576901 0.0711610019611341 0.067692017414548 0.0676678323252878 0.0703167601944795 0.0699952735980851 0.0713617397065192 0.0681782265655599 0.0721033487624085 0.0682317585869144 0.0702100564911236 5 5 - 20214992 20215664 20215313.455 20214617 20217514 - gene protein_coding_gene TRUE TRUE AT5G49720.1 KOR1 (KORRIGAN); hydrolase, hydrolyzing O-glycosyl compounds Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. Identical to Endoglucanase 25 (EC 3.2.1.4) (Endo-1,4-beta glucanase 25) (Protein KORRIGAN) (Cellulase homolog OR16pep) (KOR) [Arabidopsis Thaliana] (GB:Q38890;GB:Q56W54;GB:Q56WU0;GB:Q8H0S4;GB:Q94C24); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT4G24260.1); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT1G65610.1); similar to endoglucanase [Cucumis melo] (GB:BAF30815.1); similar to Cel9A [Populus tremula x Populus tremuloides] (GB:AAT75041.1); similar to cellulase; endo-1,4-beta-D-glucanase [Brassica napus] (GB:CAB51903.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Glycoside transferase, six-hairpin, subgroup; (InterPro:IPR012343); contains InterPro domain Glycoside hydrolase, family 9; (InterPro:IPR001701) 0.500872535354949 5.65804786529497 0.000170133448856611 0.00320579650670871 9.16539757173872 22.3190524862093 0.500872535354949 0.0638556974499555 AT5G35320_at 4.15943929108159 5.13062124491829 5.19620945742098 5.33853586402491 5.84526379109781 5.6203070502422 4.39566074222840 4.73238861505624 4.14377151955925 3.49436137924291 4.4544443329015 4.41135062716443 4.77740026678065 4.50668960475473 4.29684976297497 4.61219264278013 4.70604457176887 4.56460454229574 3.98535867528772 0.219400386331899 0.219346036047025 0.223301564436336 0.236905516724247 0.222974206660325 0.220968564588427 0.217899827824439 0.216786042109413 0.227251497559109 0.218505547957282 0.214963435806462 0.215546394622617 0.214136135734864 0.217673927927039 0.218216205591232 0.214011842517368 0.223950007709 0.214011842517368 0.221703081400559 5 0|5 /|+ 13539436 13540324 13540047.9 13539009 13540655 + gene protein_coding_gene TRUE TRUE AT5G35320.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90606.1) 0.781125709969839 5.65804511418574 0.000170134123338492 0.00320579650670871 9.165393626713 9.26015037465426 0.781125709969839 0.183751328469613 AT5G55790_at 2.76240988169653 4.73538371585035 4.57020496294299 5.25388865328692 5.40774255176957 5.15615097274022 2.45642566013269 4.22187202222752 4.33449554692828 4.09409450493851 6.71348777974797 6.3637754110191 6.22784253660786 6.81646081634213 6.5743532840016 6.50685259036125 5.3334331463736 4.9994705446021 4.54046375593683 0.307352203765994 0.282788389623906 0.290010257067944 0.294098645815749 0.282788389623906 0.282788389623906 0.311077754875899 0.296526181836874 0.308985139858201 0.291251690409853 0.296818322126228 0.291211425216068 0.295089764066513 0.310820454000951 0.293138295278646 0.293536324722398 0.291635681338404 0.291816865347659 0.286121755421698 5 5 - 22598021 22598487 22598165.25 22597896 22598561 - gene protein_coding_gene TRUE TRUE AT5G55790.1 unknown protein 1.71095777145278 5.65127789609053 0.000171801894816504 0.00323581565996727 9.15568608223505 9.5779985273641 1.71095777145278 0.47519652093091 AT5G45020_at 4.35022752570510 3.94860362575794 4.12033882755156 4.21526679318371 5.4156809455049 4.97294339062138 4.01295848241493 3.44858496207052 4.53274006428868 4.59960890530338 5.298787568095 5.77704780931698 4.91608382016208 5.46288462427327 5.66465574799386 5.01386474679887 5.04369222180786 5.29596424060483 5.00327404840289 0.218048499910808 0.205404367133190 0.207607657721200 0.20254710364161 0.204889738751698 0.205315563134421 0.20254710364161 0.206268144541531 0.206875786354185 0.206980738240710 0.206293545117146 0.208855217836733 0.209302858820263 0.203800387965280 0.208002302838443 0.20254710364161 0.204314489117524 0.211011507407562 0.2082293099037 5 5|0 +|/ 18187061 18187688 18187414.3 18185909 18187878 + gene protein_coding_gene TRUE TRUE AT5G45020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABC75353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.669106049139106 5.64520251276845 0.000173314035581287 0.00326287877808066 9.14696498794783 9.32107403745788 0.669106049139106 0.143212232508052 AT5G03430_at 9.94734165994201 9.72113121153535 10.6168656861505 10.6067681452452 10.6470417995113 10.4106355598697 10.3654254676541 10.1526516274659 9.71933703761724 9.6902133120176 10.0088642705218 10.0789436131662 10.3078273346311 10.2068457977206 9.96880963871125 10.4652490176851 10.3861039293115 10.0613838290815 9.6850984478159 0.063327060030396 0.0615692078726728 0.0611057624521433 0.061435092788041 0.0615108893171434 0.0617771635500999 0.0619591920460645 0.0616861823886636 0.062971149512111 0.066492411583742 0.0606193209029221 0.0599167150591232 0.0620526001640651 0.0620954836406806 0.0606329067573498 0.0599167150591232 0.0677112057991065 0.0606732484652307 0.0652371805840107 5 5|0 -|/ 849271 850617 849890.556 848863 853141 - gene protein_coding_gene TRUE TRUE AT5G03430.1 phosphoadenosine phosphosulfate (PAPS) reductase family protein similar to Os01g0259600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042640.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81409.1); contains InterPro domain Phosphoadenosine phosphosulfate reductase; (InterPro:IPR002500); contains InterPro domain Molybdopterin binding domain; (InterPro:IPR001453) 0.505488734540788 5.64420777155444 0.000173562973591899 0.00326614716966629 9.14553651694767 20.2503424920070 0.505488734540788 0.067565324522205 AT5G11270_at 6.44159305744065 6.40140459717392 7.25281630980672 6.88346400341869 7.48776242795882 6.52143189794877 6.90906105808281 7.05395742882875 5.83244148714738 6.44350314986367 7.3506087675709 7.96542330846595 7.30607909569474 7.52681783890201 7.58194296605289 7.47805894897212 7.18053048771712 6.75723777946032 6.2838407878548 0.195763103796291 0.18926323951609 0.194324376965419 0.191823625533160 0.199557437626749 0.194673352337696 0.19709364895069 0.191512309945001 0.209759326376199 0.192267188056114 0.191551056873608 0.190237951080854 0.187952364934792 0.197028197999676 0.190403530662650 0.187952364934792 0.204794575505791 0.200385788103836 0.193038704325542 5 5|0 -|/ 3595558 3596281 3595908.9 3595286 3597099 - gene protein_coding_gene TRUE TRUE AT5G11270.1 OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3) Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT5G63740.1); similar to Calcium-binding EF-hand; Homeodomain-related [Medicago truncatula] (GB:ABE88496.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356) 0.770803440942138 5.64158057784846 0.000174222276363055 0.00327573272486885 9.14176307725082 13.6589026179456 0.770803440942138 0.180908426245493 AT5G19490_at 3.07660835772469 2.82957500911827 3.69332348781626 3.99120685628469 3.75558706099416 3.97516827570327 2.33702710811582 3.03575283718094 2.89012252604309 2.55310209066558 2.58211830518782 2.85713810627445 2.91363348584483 2.97169008296161 2.76843585962708 3.11328222529368 3.17883489359891 2.70887343702934 2.30503625028210 0.232375928399207 0.232375928399207 0.244998905887768 0.237655544743402 0.242613001105092 0.24427681366991 0.233740143429203 0.237517674127760 0.232375928399207 0.235103604872425 0.234127399257697 0.237415981048340 0.238459727459034 0.240567096012620 0.241370485489074 0.23552731067484 0.232375928399207 0.234411764256665 0.234728230159554 5 5 - 6576815 6577515 6577191.182 6576771 6577843 - gene protein_coding_gene TRUE TRUE AT5G19490.1 repressor protein-related similar to transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G12480.1); similar to Os05g0494100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055923.1); similar to Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula] (GB:ABE81057.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958) 0.669038884655811 5.64157589385738 0.000174223454210281 0.00327573272486885 9.14175634868647 6.071533335021 0.669038884655811 0.143352944437627 AT5G57940_at 8.30526979554627 8.38157173531398 8.76560606034246 8.82972955846754 9.31637402812716 9.12463265038278 8.17099638524204 8.31759973747228 8.79075234267557 8.7724200613492 9.14893168813537 9.01737691933394 9.01939836358734 9.18270380925925 8.87666962156186 9.27216858568688 8.99682029901517 8.95076427260002 8.91979497421764 0.113063250205446 0.108468076362953 0.119854666356355 0.11199263824864 0.119680785057845 0.120587200034056 0.120305364045313 0.111826882467859 0.118027766964150 0.119077764337142 0.110357926144718 0.112875856340948 0.112763338447317 0.114029446200533 0.111784925393654 0.107886926607988 0.121922733177505 0.114748283192316 0.119577424021317 5 5 + 23477130 23477638 23477379.364 23473791 23477839 + gene protein_coding_gene TRUE TRUE AT5G57940.1|AT5G57940.2|AT5G57940.3 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel member of Cyclic nucleotide gated channel family Identical to Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5) (Cyclic nucleotide- and calmodulin-regulated ion channel 5) (CNGC5) [Arabidopsis Thaliana] (GB:Q8RWS9;GB:Q9XFS3); similar to ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G30560.1); similar to ATCNGC6 (CYCLIC NUCLEOTIDE GATED CHANNEL 6), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G23980.1); similar to ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT1G19780.1); similar to Cyclic nucleotide-gated ion channel 9, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97880.1); similar to cation channel family protein, putative [Medicago truncatula] (GB:ABE88729.1); similar to Putative cyclic nucleotide-gated ion channel 8 (Cyclic nucleotide- and calmodulin-regulated ion channel 8) (GB:Q9FXH6); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.472837281543175 5.62462075379064 0.000178543249841369 0.00335549799300192 9.1173781940981 17.5943524876843 0.472837281543175 0.0451905035959627 AT5G06700_at 8.77534230339638 9.1320387399417 9.28389962880924 9.35842789161273 9.55928496147692 9.6191967055678 9.51052537816355 9.3777938759738 9.6464662535728 9.50523841058485 10.6582949423666 10.5249178863719 10.198412495039 10.1961450800294 10.2649532302677 10.2196666630046 9.96835459051072 10.3606073314518 9.48886908646551 0.133410969633194 0.120264650432709 0.121318154130573 0.124163552045947 0.120359763097389 0.119171847041442 0.123608735742849 0.128216483839576 0.127364332195185 0.122933800705079 0.117872161975792 0.117872161975792 0.118631228342800 0.119933155616889 0.12183656683829 0.118387853162039 0.123808219238466 0.117872161975792 0.119073544465232 5 5|0 +|/ 2065232 2065780 2065595.1 2063488 2066040 + gene protein_coding_gene TRUE TRUE AT5G06700.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12060.1); similar to lustrin A-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35858.1); similar to Os06g0207500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057100.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.504169166501828 5.62328537431617 0.000178888297815621 0.00336052607493196 9.11545630777568 19.2499521577451 0.504169166501828 0.0679102042561934 AT5G16070_at 6.67659378056608 7.38845686989697 7.02710314819652 7.7755566309602 7.90427632366165 7.69546631738568 6.85777975358623 6.82988155186792 5.8955465949393 6.77428405529229 7.52393704528304 7.63913430575987 6.80754333512776 7.03775639309965 7.53542404959372 7.07515348558131 6.93997466802819 7.65332494598487 6.51222644190123 0.199316299745751 0.198255553860870 0.203366449854898 0.201187532569617 0.201303268249523 0.219654989667258 0.206547779437169 0.206827645287064 0.214939565627477 0.208440751351764 0.201783449982507 0.198255553860870 0.209436853495588 0.217778276489035 0.206339752929196 0.199260618287614 0.218835678622811 0.214388545005479 0.198255553860870 5 5|0 -|/ 5247599 5248655 5248110.778 5247357 5251182 - gene protein_coding_gene TRUE TRUE AT5G16070.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G02530.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96914.1); similar to Chaperonin complex component, TCP-1 zeta subunit (CCT6) (ISS) [Ostreococcus tauri] (GB:CAL56563.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96959.1); contains InterPro domain T-complex protein 1, zeta subunit; (InterPro:IPR012722); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) 0.772467306959037 5.62232957837246 0.000179135702348471 0.00336371630430723 9.11408055242022 14.1046643266493 0.772467306959037 0.182432089428293 AT5G15410_at 9.0492814704416 9.21091921435076 9.7913634354451 9.78051550024736 10.3549927578974 10.1722833824454 10.0216468686761 9.70554754625934 10.5720084580106 10.0146792763336 11.2030604819960 10.4376800208805 10.7195666792338 10.9222419152986 10.5760774717906 10.7599040932637 10.1160233929072 10.9052438835319 10.0772340460597 0.112788964638201 0.114714193405816 0.106444981183887 0.107213002142000 0.108366906106175 0.112169673741775 0.106862543601684 0.104065704070123 0.114609139986576 0.107724812795980 0.104554167801359 0.104889594303417 0.102018687285373 0.105745226896981 0.103535491064392 0.102018687285373 0.114701250649508 0.107726475424419 0.103319602318955 5 5 - 5003468 5004135 5003751.455 5003310 5006903 - gene protein_coding_gene TRUE TRUE AT5G15410.1|AT5G15410.2 DND1 (DEFENSE NO DEATH 1); calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel|DND1 (DEFENSE NO DEATH 1); cation channel/ cyclic nucleotide binding / inward rectifier potassium channel 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Identical to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic nucleotide- and calmodulin-regulated ion channel 2) (DEFENSE NO DEATH 1) (CNGC2) [Arabidopsis Thaliana] (GB:O65718); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.2); similar to putative cyclic nucleotide and calmodulin-regulated ion channel protein [Oryza sativa (japonica cultivar-group)] (GB:AAK16188.1); similar to cyclic nucleotide-gated ion channel 2 [Hordeum vulgare subsp. vulgare] (GB:AAY58313.1); similar to CNGC2 [Gossypium hirsutum] (GB:AAX18166.2); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821) 0.505803738152489 5.61958786028865 0.000179847415003997 0.00337561853182939 9.1101333955018 20.2239597732191 0.505803738152489 0.0691235732568533 AT5G04480_at 5.3418461941155 4.71517948970716 5.76252363786354 5.36218844313295 6.05868904290746 6.0534711314762 5.44576998784095 4.78645261126687 5.33999397070493 5.16007060549103 6.28048464429508 6.44675839171666 5.72862713153517 5.50047079405061 5.92768382264611 5.63650701720325 5.30920487599624 5.9807846375844 4.81164060470167 0.259082641890421 0.256536710675449 0.266810067905957 0.253182180513325 0.256704029588634 0.263496066502438 0.255668807085167 0.271099632798935 0.259915080400499 0.259123805816439 0.256613769700383 0.255484139762081 0.254434361689605 0.269405544662124 0.2552971097846 0.266230903232726 0.275238262061818 0.264699343550483 0.258266402659384 5 5|0 -|/ 1272020 1272614 1272430.1 1271516 1277986 - gene protein_coding_gene TRUE TRUE AT5G04480.1 similar to glycosyltransferase family protein 1 [Arabidopsis thaliana] (TAIR:AT4G01210.1); similar to Os10g0546200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065214.1); similar to Os01g0622000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043608.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.742159715262491 5.61383246125479 0.000181351273064012 0.0034023720771893 9.10184379481725 10.918373512961 0.742159715262491 0.171987611944658 AT5G22820_at 3.1538175980417 3.88850586543697 4.31240486778713 5.01902346493363 5.08646250558223 4.71595532300642 3.96013420365081 4.40726745253174 3.39424749164411 3.21519935206968 4.3050820553755 4.16013206823373 4.43563029383763 4.17122727804648 3.60052691896351 4.18738685361173 3.30367537965241 3.74630366237125 3.17350287810589 0.279791860384571 0.269722817642752 0.280867006446937 0.280946057538387 0.275067363921194 0.27453685929179 0.269722817642752 0.269722817642752 0.289508380467206 0.269742900159730 0.269722817642752 0.269722817642752 0.269722817642752 0.278550228450635 0.285320199481177 0.269722817642752 0.284710038116369 0.274025265359403 0.273229056121369 5 5|0 -|/ 7624118 7625172 7624386.5 7623443 7626978 - gene protein_coding_gene TRUE TRUE AT5G22820.1 binding similar to hypothetical protein [Ipomoea trifida] (GB:AAS79588.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.829396291783508 5.60753434088561 0.000183012331865417 0.00343205048221775 9.09276667994702 7.94281081230537 0.829396291783508 0.203019040804349 AT5G55250_at 1.84727625907014 1.28969434313560 2.55700837566619 2.49786422917079 2.77662951632166 2.59246664059237 2.77902633203949 3.09538156411813 2.16779178204200 3.06355048461763 2.69118411195970 3.18070631233551 3.35083851889473 3.57612274970708 3.39830631611961 3.85067377780323 4.00263226285263 2.67701691965871 2.26342655685102 0.228721626299836 0.222904209136306 0.222840335962908 0.221293875894696 0.21989567426053 0.231344683429852 0.224446589348603 0.224268017475559 0.233127136806832 0.225204027843007 0.226144661535089 0.227822150007084 0.223489573090802 0.233722037701947 0.224848035843135 0.227308233253354 0.231720298088875 0.242298047842426 0.223354573449636 5 5|0 -|/ 22424836 22426706 22425801.3 22424699 22428170 - gene protein_coding_gene TRUE TRUE AT5G55250.1|AT5G55250.2 IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase|IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. similar to GAMT2, S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G56300.1); similar to OSJNBa0087O24.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE03582.1); similar to H1005F08.6 [Oryza sativa (indica cultivar-group)] (GB:CAH65977.1); similar to Os04g0665200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054175.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.597913206254884 5.6069847259726 0.000183158054904651 0.00343329825188142 9.09197426320968 5.34901410534927 0.597913206254884 0.115881028902812 AT5G43920_at 5.71178691994782 5.80171187466113 6.85604020490524 6.50138257712012 7.34176455716347 6.33935540816023 5.52180751672055 5.60458839422295 5.88179103194911 6.4035655300312 6.44845355450301 6.66496803039102 6.75051357858447 6.99201021874352 6.23455997707536 7.13866036157215 6.99755757831746 6.5965747513911 6.52901802684105 0.190000941980981 0.183134482841425 0.187969855039328 0.190663000950657 0.193651038151630 0.192059275262740 0.207671295887495 0.189630935964708 0.189927661502045 0.186940901150046 0.190432890041405 0.187084521092583 0.187048656489705 0.190406452617717 0.204798458582985 0.190992986145150 0.203566766190097 0.184854585227706 0.185153929360562 5 5 + 17692116 17692831 17692510.727 17689896 17693072 + gene protein_coding_gene TRUE TRUE AT5G43920.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G08560.2); similar to Os10g0465000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064796.1); similar to PREDICTED: similar to WD-repeat protein 26 [Danio rerio] (GB:XP_693216.1); similar to Os02g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046605.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 0.778058035248817 5.60576468340688 0.00018348197552401 0.00343788381370693 9.09021508027237 12.7094899079107 0.778058035248817 0.185220666679851 AT5G03940_at 9.67860126621683 9.72704634797625 10.0081991108273 9.89851201897382 10.6377176164002 10.2495941494221 9.79311106128078 9.49099671319656 9.88176356643547 10.0138509894561 10.5688795835433 10.7397731877609 10.1840073645876 10.4251749428830 10.9075111263449 10.3058338355818 10.2624292605396 10.5072108617776 9.92032031902624 0.0766229453770751 0.0788502509553627 0.0761535079727034 0.0742702533122096 0.080040641296022 0.07680996826257 0.0745855301688373 0.0833463981372358 0.0865969918539084 0.0749555732037567 0.0763589530814587 0.0763386572600772 0.0792077874779198 0.0813523915748088 0.0751560638077014 0.0751414020670675 0.0768193501792199 0.0751345521424646 0.0781051516521376 5 5|0 -|/ 1060287 1061182 1060756.667 1060133 1063318 - gene protein_coding_gene TRUE TRUE AT5G03940.1 FFC (FIFTY-FOUR CHLOROPLAST HOMOLOGUE); 7S RNA binding / GTP binding / mRNA binding mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit Identical to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) (FFC) [Arabidopsis Thaliana] (GB:P37107;GB:O82570); similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.1); similar to Signal recognition particle 54 kDa protein, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22369.1); similar to GTP-binding signal recognition particle SRP54, G-domain [Medicago truncatula] (GB:ABD32670.1); similar to signal recognition particle 54 kDa subunit precursor [Pisum sativum] (GB:AAC64109.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897); contains InterPro domain Signal peptide binding (SRP54) M-domain; (InterPro:IPR004125); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Signal recognition particle protein; (InterPro:IPR004780) 0.537512219404829 5.60498422371294 0.000183689507688598 0.00344028559685312 9.089089613393 20.1485960248784 0.537512219404829 0.0876092699198024 AT5G08480_at 0.728880191782336 0.773375188597573 0.881048332817772 0.9404446039192 0.861800511112287 0.786536089013624 1.11265298562421 1.13356892987425 1.26227384368298 1.45405813826433 2.47927590811524 2.59370641184506 2.27949661779026 2.40695820793376 2.18182016939564 2.07837395759348 1.57551520936993 2.37470665056674 1.11794667219904 0.174268824782512 0.16895131944589 0.177319171813561 0.171719758386379 0.176525026155205 0.169170211755018 0.170316426673739 0.169297053733172 0.169692510588002 0.173323891854929 0.182377796004628 0.174790681517456 0.174342205919720 0.180210144690740 0.170648665429053 0.170983413248392 0.1870354037339 0.168374383782331 0.173545559946510 5 5|0 +|/ 2744511 2744977 2744727 2743621 2745112 + gene protein_coding_gene TRUE TRUE AT5G08480.1|AT5G08480.2 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT1G28280.1); similar to VQ [Medicago truncatula] (GB:ABE85646.1); contains InterPro domain VQ; (InterPro:IPR008889)|similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT2G33780.1); similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT1G28280.1); similar to VQ [Medicago truncatula] (GB:ABE85646.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.449238408553471 5.60391489102282 0.000183974260909414 0.00344413093982423 9.08754742363105 2.66445061723851 0.449238408553471 0.0186465350040702 AT5G11950_at 8.28292980747284 8.52776955222833 9.19393818296063 9.08935994484516 8.96690751716532 8.6824496053764 8.3962735677157 7.98506420326725 7.63112021634104 7.71265851024829 8.28671632729289 8.24237643551148 8.07553762972882 8.09409190337953 7.78401891461912 8.4860054733912 7.49703954047972 7.39494491302659 7.3117458581233 0.194922225596104 0.18945365601895 0.198209493509038 0.191753824223362 0.187611202966377 0.194781920421667 0.187796804439914 0.191137448784608 0.204908272217153 0.197638893916848 0.192373348873042 0.188676533593943 0.194405293465626 0.196953731311275 0.199757489885716 0.189018611748454 0.197769884843678 0.217207840916978 0.189386089799649 5 5|0 +|/ 3855150 3856775 3856333.889 3854917 3856984 + gene protein_coding_gene TRUE TRUE AT5G11950.1|AT5G11950.2 Identical to Lysine decarboxylase-like protein At5g11950 [Arabidopsis Thaliana] (GB:Q84MC2;GB:Q570P8;GB:Q9LYH8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABE86251.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) 0.557952196928487 5.59971705631654 0.000185096666887392 0.00346364765970317 9.08149161753286 16.4078030078371 0.557952196928487 0.0980309310923484 AT5G09590_at 7.5237478824938 7.70763228954562 8.7236109795912 8.56054480683534 7.69432467825923 7.70372729783561 7.94360901815293 8.18691654838572 6.56599880589811 7.82290183342195 7.83430687791459 8.1574765417682 7.71506945120341 7.32322023796904 7.59915234563 8.2139174097709 7.95575520380886 7.61878209800929 7.07008976867169 0.123687132536529 0.130231867548976 0.125964076491865 0.131895429125241 0.125186794477046 0.131479007658117 0.134065808979093 0.135938922649128 0.144813310278710 0.129747997823552 0.126704103189815 0.126747603351797 0.136945934006745 0.130192852965838 0.126567927794010 0.125892326330730 0.131319955851879 0.135713078333618 0.13627871263342 5 5 + 2977910 2978120 2978001 2975549 2978751 + gene protein_coding_gene TRUE TRUE AT5G09590.1 mtHSC70-2 (HEAT SHOCK PROTEIN 70); ATP binding / unfolded protein binding heat shock protein 70 (Hsc70-5); nuclear similar to MTHSC70-1 (mitochondrial heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G37910.1); similar to CPHSC70-1 (chloroplast heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G24280.1); similar to cpHSC70-2 (HEAT SHOCK PROTEIN 70-7), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G49910.1); similar to Heat shock 70 kDa protein, mitochondrial precursor (GB:P37900); similar to Heat shock protein Hsp70 [Medicago truncatula] (GB:ABE92899.1); similar to Heat shock 70 kDa protein, mitochondrial precursor (GB:Q01899); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Chaperone DnaK; (InterPro:IPR012725); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) 0.489644362040598 5.59818861396967 0.000185507150348724 0.00346983133630816 9.079286011658 15.4831175993490 0.489644362040598 0.0598706652231025 AT5G28490_at 2.88687824877079 2.45611266557968 2.87502609773242 2.47364571898415 2.85264525041297 2.62205077386373 1.89630460848303 2.33446047162874 2.57993086479781 2.62699060561018 3.52186697484032 3.97807953718779 3.17556371620919 3.51546749598993 3.47181089471475 3.22034475968076 3.20939239484858 3.86533123756106 2.38622886368713 0.233092426318125 0.233946520944644 0.234281706966265 0.237031875449518 0.233693511944454 0.240039965840547 0.243377766942119 0.24496226631576 0.262237857251566 0.243472650590532 0.249742626343193 0.237275478148717 0.240272205867340 0.240849013861922 0.242262365318457 0.242625205208028 0.233092426318125 0.240092625341529 0.235769780360515 5 5 - 10454553 10455087 10454805.909 10454397 10455200 - gene protein_coding_gene TRUE TRUE AT5G28490.1 LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04510.1); similar to Ribulose bisphosphate carboxylase, large chain [Medicago truncatula] (GB:ABE90860.1); contains InterPro domain Protein of unknown function DUF640; (InterPro:IPR006936) 0.63804248832338 5.59701168183372 0.000185823892972628 0.00347425705396941 9.07758740538554 5.56253159830398 0.63804248832338 0.133130624343198 AT5G20170_at 6.502888992477 6.64781470675042 7.47375382620078 7.56730018166264 7.77789196655623 7.52603621814579 6.35613682840627 7.01259101101972 7.1688809781512 6.42815719270102 6.91483115145858 7.21302825301244 7.18696807541135 7.15689468165784 6.97034289707269 7.23087210681082 6.66392333137745 6.98850575508986 6.6809656729883 0.201237219278468 0.194956929955473 0.204995695930708 0.196965446741823 0.197155698991361 0.201156402575629 0.202035387493162 0.193828315306458 0.200491007465436 0.208902590649442 0.193828315306458 0.204016397901576 0.196112953698627 0.198826851630905 0.198065816481269 0.195962416201173 0.217979590707042 0.199610092731394 0.198659125284655 5 5|0 -|/ 6807569 6808201 6807881.8 6807483 6810800 - gene protein_coding_gene TRUE TRUE AT5G20170.1 similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86508.1) 0.618861915175439 5.59630518667469 0.000186014306063694 0.00347631805388089 9.07656765479277 14.0080544144523 0.618861915175439 0.125284620176807 AT5G67350_at 3.60392477329683 3.96034242128763 4.46817094710285 4.79967100919817 4.27597708563717 4.82674146637792 4.40880282427702 4.58324938582671 3.97618942329913 4.29151885880885 5.33928585127321 4.99219042766357 4.95180289688611 4.62376485858101 4.75761152761417 5.47732529846534 5.00747769895015 4.66157093894098 4.23075193334798 0.218882915000270 0.227637011705942 0.222694450761921 0.218722313354767 0.212946362278653 0.224552898532838 0.217324842009356 0.230171479738641 0.225981538024616 0.225364438457128 0.221365525232289 0.216997941956033 0.215716831955972 0.213194445599183 0.212753885664329 0.222922576184844 0.240075749383308 0.222472170699785 0.217152703247730 5 5 - 26885767 26886321 26886099.455 26885516 26886712 - gene protein_coding_gene TRUE TRUE AT5G67350.1 similar to hypothetical protein MtrDRAFT_AC144765g16v1 [Medicago truncatula] (GB:ABE87032.1) 0.631892779025908 5.59477757874488 0.000186426735838677 0.00348252463667705 9.07436245347673 8.93712603534994 0.631892779025908 0.130733473942894 AT5G41100_at 3.16385820187157 3.60212214477212 4.39955978253392 3.97416277383729 4.31787055130507 3.62204973531391 3.10492863999586 2.84421071425972 2.87248554835570 3.09494771235183 4.01667519081556 3.87261096498201 3.84994164882211 3.28041233641327 3.6062668782863 3.79140462129267 2.69519308073942 3.45348176981799 3.10204766819308 0.234579577668132 0.235689020455021 0.233974121216671 0.235212952202527 0.23477472401976 0.245320501860976 0.237217630085183 0.233726541823112 0.256391042214252 0.236992587973544 0.231622421816305 0.246318392513518 0.233694226863849 0.243859259983757 0.235530105578505 0.237461261887345 0.247799031822821 0.234675864172834 0.238506168547044 5 5 + 16467318 16467741 16467495.818 16464450 16468109 + gene protein_coding_gene TRUE TRUE AT5G41100.1|AT5G41100.2 DNA binding similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G26910.2); similar to Os09g0509300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063628.1); similar to Os04g0394700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052655.1); similar to hydroxyproline-rich glycoprotein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD38129.1); contains InterPro domain IHF-like DNA-binding; (InterPro:IPR010992) 0.723609393642679 5.58785049189408 0.000188309220039304 0.00351617524102573 9.06435826074308 6.92554962850103 0.723609393642679 0.166454690323203 AT5G38280_at 2.00213509073116 2.10406097634444 2.68942426467277 2.60294330371066 2.54258924467847 2.58282963075136 2.07536604563167 1.85972693681897 1.68308789364218 1.98821228520313 2.23749366407499 2.00976697695673 2.43941333984263 2.25756895526515 2.16477131940092 2.48369616938147 2.36126143358585 2.64696738444818 2.27418436187794 0.195967945366331 0.196014401137513 0.200418028875217 0.192636035866930 0.194667363407321 0.199665987489276 0.191023177430010 0.192642921860240 0.197773264020465 0.192869042305906 0.204479864402345 0.190708604286908 0.203800544457394 0.190708604286908 0.192064188968582 0.191945222675889 0.208279115513989 0.190708604286908 0.193443887947486 5 5 - 15310557 15311111 15310825.818 15310351 15314553 - gene protein_coding_gene TRUE TRUE AT5G38280.1 PR5K (PR5-like receptor kinase); kinase/ transmembrane receptor protein serine/threonine kinase putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase similar to receptor serine/threonine kinase, putative [Arabidopsis thaliana] (TAIR:AT4G18250.1); similar to receptor serine/threonine kinase, putative [Arabidopsis thaliana] (TAIR:AT1G70250.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.468706786850083 5.5853547412451 0.000188992418709289 0.00352741303711211 9.06075205979153 4.46085722947272 0.468706786850083 0.0444542895471317 AT5G63830_at 3.59916942148364 3.62668722381620 4.1416016771686 4.30490626706295 4.97943936490087 4.9147125737694 3.37816553277786 4.05722864149082 3.55963707488697 3.5947993062802 3.97015637866512 4.01539708542028 3.89485501283304 3.72724994149345 3.49405890041207 4.0601355302124 3.70797287082847 3.83910251399858 3.47184209227729 0.214937345321688 0.213539986629275 0.224197872831091 0.221346504453898 0.225621564333713 0.236397834942174 0.217323725616777 0.221476577616381 0.216716833552862 0.219562002138389 0.218566932914248 0.217562789990421 0.218115450678327 0.217020029562146 0.215218917717245 0.215097950466029 0.230516427523727 0.227196920570712 0.215465814372555 5 5 - 25560819 25561366 25561152.364 25560776 25562017 - gene protein_coding_gene TRUE TRUE AT5G63830.1 zinc finger (HIT type) family protein similar to Predicted Zn-finger protein (ISS) [Ostreococcus tauri] (GB:CAL52783.1); similar to Os10g0520700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065086.1); contains domain ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATED (PTHR15555); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGI19 (PTHR15555:SF4) 0.60818773529238 5.5814421535881 0.000190068796972384 0.00354597643014778 9.05509669607294 7.815593264666 0.60818773529238 0.121476717148832 AT5G19570_at 4.88678010405462 4.94146090554346 4.69161899452498 4.46594843792990 5.38370228535406 5.32385818199191 4.38791646057736 4.77009295216195 4.30719897805537 4.45697465887414 5.38312043016792 6.05338516336116 5.15355359343599 5.28149859717273 5.4159973892594 5.19745463557854 5.180085415929 4.82123517112456 4.72880116765438 0.250452962361294 0.247945962260563 0.261082516137920 0.257508302909354 0.245920823697083 0.253718951702934 0.25194087724987 0.249871311503946 0.256307758677802 0.249163410947795 0.250209935592425 0.250360869544969 0.251585447335682 0.250060517076064 0.253607040367109 0.245920823697083 0.245920823697083 0.252714371375866 0.246142971008393 5 5 + 6606759 6607130 6606909.273 6606702 6607205 + gene protein_coding_gene TRUE TRUE AT5G19570.1 similar to Os05g0188300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054840.1); similar to hypothetical protein DDB_0232155 [Dictyostelium discoideum AX4] (GB:XP_642584.1) 0.516426200337447 5.56890114697771 0.000193563212557952 0.0036096160298058 9.03695374513415 9.76064707411642 0.516426200337447 0.0780776496894349 AT5G07060_at 1.46158062602126 1.50346168112407 2.21801111135375 2.48482220572411 1.91573214715096 2.89761898026153 1.19034608373236 1.23191980879102 1.47339610067263 1.40048414632142 2.08164519824403 1.74113076757562 2.42716853576373 1.84123896989947 1.71245570949146 1.77979503131224 1.48511144876184 1.74943275594416 1.29238523810084 0.174787667908443 0.176103732422833 0.178195088675154 0.17764741281329 0.175376547063273 0.184393048808945 0.175594152905142 0.173336222161879 0.181069491287640 0.174234281311210 0.179123792005969 0.173336222161879 0.176352856542529 0.178078605726944 0.177561607204137 0.177196512501934 0.193287778390597 0.177082839384631 0.174490896379945 5 5 - 2194465 2195051 2194681.909 2194395 2195873 - gene protein_coding_gene TRUE TRUE AT5G07060.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT1G07360.1); similar to U2 auxiliary factor small subunit [Medicago truncatula] (GB:ABE89510.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.747855600815594 5.56561127019577 0.000194491204450716 0.00362536216314697 9.03219031754321 3.48343781243106 0.747855600815594 0.176377624971815 AT5G01340_at 2.84180492874437 3.28073425458115 3.45874016189729 3.47509666173114 3.06777754199619 2.72523507903408 2.66229053481188 3.07055077567406 2.33131542390774 2.66517984434946 3.26235244620374 4.00812974752286 3.12711760391792 3.57141052590765 3.88374852342367 3.17583114217527 3.34603711221062 3.51415521834501 2.50488901088769 0.194099856449352 0.189075075292729 0.191199871789437 0.189075075292729 0.195305079618853 0.204023939457624 0.194381136781949 0.197226505960421 0.210664041169242 0.195179504662376 0.201236502206075 0.197163842377829 0.200991107113185 0.189944142024845 0.209443314771523 0.189075075292729 0.210767523496238 0.199123038104923 0.196134336066104 5 5 - 143242 144197 143571.273 143054 144719 - gene protein_coding_gene TRUE TRUE AT5G01340.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G37890.1); similar to Os03g0292200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049803.1); similar to Mitochondrial carrier protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95404.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.601751800646762 5.56446266041231 0.000194816315261230 0.00362986174608584 9.03052684913031 6.06605835048126 0.601751800646762 0.119512790140197 AT5G65570_at 1.47863178270162 1.28683814786432 1.93381249882756 1.91822605368713 2.18368874700869 1.88530370227188 1.42298123089696 1.57163046003888 1.37884320186957 1.35598681709929 2.01974185878264 1.66182873642548 1.81893816847022 1.62827627367135 1.99077161343846 2.09052851236430 1.63385981913423 1.47037467530720 1.27323551410903 0.209919546730913 0.20991973199147 0.209683388674105 0.206460920870500 0.207782017709566 0.211517707791721 0.209647460529924 0.207008042082992 0.208722366216624 0.208479506870731 0.211485203048239 0.214426077004351 0.209215058758611 0.210180500046311 0.209151711986420 0.216909472093815 0.216317224204901 0.225658808385547 0.207853197424246 5 5 + 26222811 26223380 26223056.909 26221194 26223410 + gene protein_coding_gene TRUE TRUE AT5G65570.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G11290.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.496752728956655 5.56347714715535 0.000195095724128916 0.00363350630022238 9.02909942311702 3.27279497869139 0.496752728956655 0.0666109777430102 AT5G61030_at 5.23026456980973 4.93916445726784 5.99676167679623 6.01486951914259 5.10837893160119 5.19521541484938 4.91633924614173 5.10964077093932 4.51591936909582 4.90944049845598 4.90906221046671 5.13384576965102 5.36092188301685 5.04397751985745 5.59902063889359 5.05735087374088 5.73275917364664 5.00792315139501 4.92037088148521 0.164834457490633 0.164834457490633 0.164834457490633 0.172027233263584 0.164834457490633 0.166394334318673 0.168371721097875 0.167281373550834 0.179044638325099 0.167422773994537 0.175449941475295 0.176899256160638 0.171185183157766 0.164834457490633 0.168037984051909 0.166902148539352 0.178128403893842 0.169572731644021 0.164834457490633 5 5 + 24578883 24579251 24579079.818 24577677 24579532 + gene protein_coding_gene TRUE TRUE AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. similar to GR-RBP5 (glycine-rich RNA-binding protein 5), RNA binding [Arabidopsis thaliana] (TAIR:AT1G74230.1); similar to RNA-binding protein precursor [Solanum tuberosum] (GB:AAL07519.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.489325763731107 5.55245995913584 0.000198248536455679 0.00369063965420883 9.01313188819253 10.3200882744498 0.489325763731107 0.0623893201991394 AT5G02160_at 11.1207530986114 11.3507126890826 10.6347553614587 10.7945605105268 11.6015175455180 11.4612774267801 10.7377837542771 10.7600289257126 11.5333544730846 11.2250467051852 12.5411841616014 12.4138245924535 11.9330338242962 12.2553976820419 12.2675359742788 11.7871553252131 11.6034026012558 12.0864440177477 11.1018571035633 0.0826353949635463 0.0796400678369631 0.08464074080876 0.0838066179078673 0.0811635242311262 0.082917516498201 0.084013818328189 0.0868590939314355 0.0883600696517924 0.0796400678369631 0.0832656062082578 0.0831770687565976 0.0839279989610197 0.0862169704264143 0.0849764597212698 0.080843680192779 0.0825440516410034 0.0822626030476187 0.0839835986229106 5 5|0 +|/ 426402 426592 426482.3 426352 427252 + gene protein_coding_gene TRUE TRUE AT5G02160.1 similar to hypothetical protein [Solanum lycopersicum] (GB:BAD95796.1) 0.477476302949998 5.54639357239383 0.000200007728514195 0.00372179115089009 9.00433174585593 22.7565486804820 0.477476302949998 0.0543350962525289 AT5G06180_at 3.8073973787224 3.67800348667124 4.39383375997428 4.21596020856356 4.32918133967968 4.50517005982187 3.77228428775191 3.55596269447858 3.59958800036016 4.02485986216984 4.24411364418144 4.24986069538511 4.07538568830454 4.48053398291874 4.21346851451995 4.18866013889465 3.78027425179775 4.64509112001296 4.12829129379296 0.170233221557402 0.171987713330012 0.170233221557402 0.174086102942884 0.189434137152026 0.173544614378586 0.181612069158271 0.173084467998301 0.173504492441588 0.177353621559636 0.171397019690514 0.175816281398129 0.171474056065481 0.176777870420109 0.173859178134405 0.170655718612244 0.177151823063070 0.170233221557402 0.176875076490858 5 5|0 +|/ 1874371 1875311 1874955.8 1873163 1876060 + gene protein_coding_gene TRUE TRUE AT5G06180.1|AT5G06180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22350.1); similar to OSIGBa0137L20.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66474.1); similar to Protein of unknown function DUF1022 [Caulobacter sp. K31] (GB:ZP_01422054.1); similar to Os04g0414000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052751.1); contains InterPro domain Protein of unknown function DUF1022; (InterPro:IPR009367) 0.487359082915693 5.54562363062895 0.000200232191864012 0.00372436957615227 9.00321443391683 8.10835076359605 0.487359082915693 0.0614645830997396 AT5G25130_at 3.8152074312733 3.40922917365044 5.85102268027686 5.63944438781234 5.69056614482954 5.35973780966135 5.73006824138486 5.7498555243506 5.9253934922169 5.95207694257873 6.3258265145526 5.16684384507939 5.97018931601931 6.6740522536959 5.19881015387085 6.21893194173196 6.21435313040181 6.24980057028705 5.69713737983775 0.220056485918191 0.21846640660615 0.167963032198841 0.163979874811923 0.163799887351437 0.165648626092714 0.172540237198943 0.166894881810818 0.165309248748586 0.166702325670322 0.163799887351437 0.164767005178040 0.163799887351437 0.165845447430576 0.169808032226865 0.165919593259573 0.170500868771304 0.167275553195856 0.169295050601935 5 5 + 8669567 8670059 8669780.909 8668302 8670197 + gene protein_coding_gene TRUE TRUE AT5G25130.1 CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B12 (EC 1.14.-.-) (CYP71B12) [Arabidopsis Thaliana] (GB:Q9ZU07); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25120.1); similar to CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25140.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.551625511903644 5.54086705473403 0.000201624860367771 0.00374866538464363 8.99630984489258 11.0859182094462 0.551625511903644 0.0978061486137205 AT5G39100_at 2.57497196755215 2.44052050908279 4.04903189971913 3.56661229597874 2.68344551218718 2.74600681833838 1.98822695758582 2.2683546199888 2.33778695309569 2.42074493915795 2.50204771719404 2.24679049900973 2.46479605051204 2.50537837644225 2.62073517287976 2.85522530730544 2.54060190486973 2.38295958918135 2.28235111837458 0.217129055484672 0.21586507441235 0.223102294260517 0.220756396223136 0.21586507441235 0.221443527020472 0.21586507441235 0.219239072328577 0.216215927183646 0.217284198391774 0.21586507441235 0.221383295864214 0.223430426045593 0.219468854439541 0.21586507441235 0.216926897616161 0.223288548705563 0.223533563445463 0.218888363022678 5 5 - 15670443 15670773 15670633.273 15670318 15671248 - gene protein_coding_gene TRUE TRUE AT5G39100.1 GLP6 (GERMIN-LIKE PROTEIN 6); manganese ion binding / metal ion binding / nutrient reservoir germin-like protein (GLP6) Identical to Germin-like protein subfamily 1 member 13 precursor (GLP6) [Arabidopsis Thaliana] (GB:P92997); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39110.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39120.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) 0.555555720817511 5.53697258090362 0.000202772806992985 0.00376839237832014 8.99065408884162 5.22053523791264 0.555555720817511 0.0998918669245396 AT5G25220_at 6.9975987945767 7.27360828868384 8.82704863873336 8.6457780864497 9.07652058453011 8.20240918748551 8.60923358138797 8.31254202792478 7.34732679525613 7.74393840907128 8.3779082682728 8.09314688289753 8.35767169875125 8.43165374344536 7.32039855442173 8.5001439175066 8.13972430115879 7.72994145764335 7.5864966681203 0.202984525823341 0.199052554485261 0.200389720428581 0.194421908268111 0.198842193063366 0.215145195313204 0.197029094166523 0.203612088074036 0.210516234339028 0.196425881490015 0.201030375292393 0.192503585749356 0.196505550478881 0.200614578854006 0.20637108563767 0.200403778088619 0.20449531558481 0.201393281367373 0.199530587122405 5 5 + 8737208 8738093 8737627.182 8736077 8738587 + gene protein_coding_gene TRUE TRUE AT5G25220.1|AT5G25220.2 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription factor|KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia Identical to Homeobox protein knotted-1-like 3 (KNAT3) (KNAT3) [Arabidopsis Thaliana] (GB:P48000); similar to KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G11060.1); similar to Homeobox protein knotted-1-like 3 (KNAP3) (GB:O04136); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain KNOX2; (InterPro:IPR005541); contains InterPro domain KNOX1; (InterPro:IPR005540) 0.724631548342973 5.52903301752022 0.000205134741208072 0.00381065392143729 8.97911663853245 16.0821311789689 0.724631548342973 0.169658618340710 AT5G32450_at 10.1769794340214 10.3992319711685 10.7573201967494 10.7879815536523 11.1682583602985 11.0512535845954 10.3813688146162 10.5259555399560 11.0981978122368 10.7679339893307 11.8126144541897 11.2100749268701 11.5320279465555 11.4515819809397 11.3167565170136 11.1926972792994 10.7969093812674 11.4054130171975 11.0384093747242 0.0667328989226555 0.0666688459178976 0.0685675038683339 0.0686933203347622 0.068095842645062 0.0712690868567145 0.069939060505901 0.0678033989976396 0.078398386796343 0.0690109576819496 0.0696565546541918 0.0669819260619257 0.066351673829896 0.0693932184905061 0.0689422681107024 0.067373771138601 0.0756128562983039 0.0709312653500224 0.0677068651272196 5 5|0 +|/ 12097608 12098288 12097978.556 12096841 12098803 + gene protein_coding_gene TRUE TRUE AT5G32450.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G17720.1); similar to RNA-binding re (GB:ABD28433.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.470949264851404 5.52851803590167 0.000205288952495131 0.00381188540511143 8.97836795428211 21.8100135968891 0.470949264851404 0.0504334105944512 AT5G11840_at 8.97792389050908 9.1384396396836 9.70968080608516 9.87814976791906 10.0060125365505 9.36824340010705 9.37494739154005 9.61495471501923 9.29372671428115 9.15254297174487 10.0506966081925 9.69937350206043 10.0056548188790 10.0612255465957 9.70540255191395 10.1122339943330 9.6316957968722 10.0176619105646 9.02296405358706 0.106665979701541 0.102779110977757 0.115400512420830 0.103713779448728 0.103850520322489 0.119536100027368 0.111381385042890 0.102507098358430 0.106947472976232 0.107779532677217 0.104994400312474 0.102814779787228 0.103445913290696 0.112031174879945 0.105542430816115 0.106056482139680 0.109827295440732 0.103996031212498 0.112940815095789 5 5|0 -|/ 3813619 3814590 3814193.7 3813611 3814806 - gene protein_coding_gene TRUE TRUE AT5G11840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67370.1); similar to Os05g0539900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056177.1); similar to Protein of unknown function DUF1230 [Medicago truncatula] (GB:ABE85761.1); contains InterPro domain Protein of unknown function DUF1230; (InterPro:IPR009631) 0.609018531558089 5.52167008253051 0.000207351365502183 0.00384853290093386 8.96840847994521 19.0419961872838 0.609018531558089 0.124611385090015 AT5G53970_at 7.67096339443756 8.01353445540227 9.30519043195048 9.30169232677996 9.4980758207081 8.89341432208044 9.53024299773907 9.44360598171226 7.41366060253276 8.67122240222672 8.9017394590564 8.52204185377828 9.1897161481666 8.83847991242884 7.99483651720374 9.29205379203692 8.97865155757866 8.57066790766607 8.4257850715177 0.189378337444807 0.178197514305118 0.171658764066048 0.173855988585321 0.177315250660534 0.191543298502522 0.186077467475480 0.173806634583743 0.210640777204689 0.181946351304943 0.175197143314505 0.171658764066048 0.172481894762664 0.180753745851975 0.189117625134962 0.173648055357034 0.192462420856701 0.18362285500272 0.177745748822712 5 5|0 +|/ 21928906 21929789 21929322.7 21927763 21930003 + gene protein_coding_gene TRUE TRUE AT5G53970.1 aminotransferase, putative encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment similar to aminotransferase-related [Arabidopsis thaliana] (TAIR:AT5G36160.1); similar to tyrosine aminotransferase [Glycine max] (GB:AAY21813.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005958); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.600403609726998 5.51593445464995 0.00020909577948082 0.00387924935706636 8.96006120608116 17.4352130091422 0.600403609726998 0.121198654224063 AT5G63630_at 3.04101806979833 3.19934537295437 3.54149431381586 4.07320744843009 3.86478254653496 3.98918204834768 3.4472239808072 3.23661371994265 2.39827474806411 3.35201654745251 3.16940818352163 3.28461287872003 3.35543100836941 3.52941971355272 3.4769052417149 3.78577791944382 3.99487204226425 3.53639619746895 3.33139157265051 0.211654835684988 0.207710322782466 0.221203629135320 0.220194385976320 0.205869904411739 0.21061385016431 0.211489129369711 0.211600772014622 0.224155698005762 0.207546138315801 0.213917843732358 0.211070239776012 0.207284554496261 0.207999561350459 0.204291377327172 0.205874143108231 0.215553111184458 0.219782148139069 0.211470087970134 5 5 - 25489826 25490645 25490212.091 25489824 25492422 - gene protein_coding_gene TRUE TRUE AT5G63630.1 DEAD box RNA helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 31 (EC 3.6.1.-) (RH31) [Arabidopsis Thaliana] (GB:Q9FFQ1;GB:Q9ZRZ6); similar to DEAD box RNA helicase (RH26) [Arabidopsis thaliana] (TAIR:AT5G08610.1); similar to DEAD box RNA helicase (RH25) [Arabidopsis thaliana] (TAIR:AT5G08620.1); similar to myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61516.1); similar to DEAD-box ATP-dependent RNA helicase 31 (GB:Q9FFQ1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD46119.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.562745789408052 5.50311406501418 0.000213051757125348 0.00394926285919914 8.94138497087697 6.82102369800606 0.562745789408052 0.104925700032716 AT5G51380_at 2.19051504266018 2.01307054499116 2.70298982302356 2.65015409850136 2.52428057197849 2.46685026384581 2.20630509045837 2.003162959829 2.36408695664448 1.88590972788411 2.4669100118811 2.4387275188796 2.36565783980923 2.31863428720746 2.62295487187169 2.60639611045107 2.51165253056333 2.67163113890125 1.90133356656343 0.191351417092367 0.188067621656435 0.188067621656435 0.192296545715803 0.189649093149355 0.190756636697577 0.190667234311342 0.192494487719269 0.191538341122956 0.204513361677632 0.208914160801975 0.188299102360317 0.189273285890630 0.190724023389911 0.190530273503708 0.188067621656435 0.189739942832523 0.188067621656435 0.195029896006491 5 5 + 20894074 20894940 20894488.636 20893102 20895215 + gene protein_coding_gene TRUE TRUE AT5G51380.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G51370.2); similar to Os02g0658500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047636.1); similar to putative F-box and leucine-rich repeat protein [Jatropha curcas] (GB:ABI64127.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.46634120075877 5.50061198694612 0.000213833086039395 0.00396205216025544 8.93773710313073 4.62004802727412 0.46634120075877 0.0485920513979105 AT5G58870_at 9.90755488542429 9.94668030198565 10.7763456809517 10.9369315342488 10.7558580460851 10.738575119226 10.9044296021765 10.9246730409346 10.4089272784384 10.6121410489486 10.9871045125995 10.8738880882938 11.1626757534281 10.9970487303944 10.7200063328656 11.3626562777759 11.2671860570106 11.0510430066987 10.5969208896581 0.0724082923425294 0.0734140332071672 0.074978548647508 0.0752127277977274 0.0760555258120618 0.0772794162960738 0.0739989980142788 0.075140565085358 0.0856573303692431 0.073761233960481 0.0777376946466205 0.0723025193880612 0.0759286811085044 0.0753954898926374 0.0816968291228402 0.0743462813185136 0.0781289060951636 0.078913269304272 0.0757616871497608 5 5|0 -|/ 23787318 23788141 23787835.8 23787037 23791006 - gene protein_coding_gene TRUE TRUE AT5G58870.1 FTSH9 (FtsH protease 9); ATP-dependent peptidase/ ATPase/ metallopeptidase encodes an FtsH protease that is localized to the chloroplast similar to FTSH7 (FtsH protease 7), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT3G47060.1); similar to Os02g0649700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047584.1); similar to 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus tauri] (GB:CAL56127.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.447232246682956 5.49992110881325 0.000214049365713303 0.00396436537130774 8.9367296784314 21.4073964433283 0.447232246682956 0.0289715995564025 AT5G04430_at 9.29742042689173 9.31477622295102 9.51530235699146 9.59035760192826 9.92953936380888 9.8417865013534 9.93865754360017 9.92759008306318 9.63053947495536 9.35158624342425 10.3483147959937 10.4837365125358 10.1097865555899 10.1790033567343 10.5887074762001 10.1320835521895 9.95293601116974 10.1429962615774 9.39524450361705 0.0812333433087386 0.079005343347513 0.080678849142863 0.081713041741119 0.0822589242726943 0.0793598139636407 0.083011683766999 0.0828669540835324 0.0836223119317282 0.0828173394948271 0.078450720522061 0.0788997620398335 0.078450720522061 0.082845424566052 0.0810828681523217 0.080568413405976 0.0832067841872721 0.0809217454263755 0.0843063062423484 5 5|0 -|/ 1250604 1252721 1251759.2 1250252 1253866 - gene protein_coding_gene TRUE TRUE AT5G04430.1|AT5G04430.2 KH domain-containing protein NOVA, putative similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G33680.1); similar to Os02g0822300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048558.1); similar to transcribed sequence 1087 [Zea mays] (GB:CAA54960.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.441353772405273 5.49517419611823 0.000215541708926272 0.00399030023256269 8.92980584606222 19.520088248864 0.441353772405273 0.0202980410406848 AT5G06290_at 10.0876646910959 10.1982020073962 10.3158883441813 10.3522058499265 10.2986571903521 10.1654651519541 10.5622399834470 10.5262545090146 10.8124733711581 10.8358402039346 11.7780302045295 11.9905630272273 11.6872092446943 11.540389482771 12.0290915557788 11.9081726881096 11.5186082345180 11.9148356064002 10.8676581230932 0.0920959777536324 0.0818812300487977 0.0813339826610164 0.0824857156580683 0.0800881835567598 0.0841857961814265 0.0816584030162527 0.0813662406978898 0.088107952462218 0.0840991557828607 0.0834796517110914 0.0806758825613792 0.0830283155455517 0.0820441457068257 0.08267366497623 0.0794346349979965 0.0794346349979965 0.0815469305887065 0.0828746726995793 5 5|0 +|/ 1920230 1921117 1920699 1919214 1921426 + gene protein_coding_gene TRUE TRUE AT5G06290.1 2-cys peroxiredoxin, chloroplast, putative similar to 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] (TAIR:AT3G11630.1); similar to 2-Cys peroxiredoxin [Brassica napus] (GB:AAG30570.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866) 0.44833455457002 5.49214667772038 0.000216499295793055 0.00400631729483499 8.92538811243896 21.6305820850371 0.44833455457002 0.0312326672466821 AT5G42765_at 6.83085151964672 7.4542758035032 7.15760833461237 7.41364907768083 7.65788952592134 7.27122949046583 7.48597317604638 7.67379301661342 7.28151921196724 6.60483278288448 8.33019622319042 8.41880563671692 8.10206944897586 8.54406356466425 8.24915083516595 8.6873942910191 7.65479011962874 7.6868933366028 6.95038909769778 0.185287075036220 0.181481950698632 0.183734708922888 0.180067938308193 0.172505350403217 0.188582089211945 0.172426524491265 0.172426524491265 0.187324590317379 0.196396840865747 0.179041198406364 0.176845839815096 0.175472845460379 0.173020377056613 0.183378986595358 0.175777679919196 0.182859963214286 0.192348884644836 0.181081223367830 5 5|0 -|/ 17167768 17168744 17168309.889 17167466 17168909 - gene protein_coding_gene TRUE TRUE AT5G42765.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP68897.1); similar to Os03g0774400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051422.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99113.1); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) 0.638730398015002 5.49133266372952 0.000216757536668005 0.00400938482118607 8.9242000691964 14.9455341411506 0.638730398015002 0.138335202200297 AT5G22620_at 9.4124644807786 9.16546619724614 9.9473567278068 9.7028846677455 10.0558454856641 9.78744598520453 10.0622425943968 9.8521811385728 9.6304635354720 9.77382155629692 10.5366875771991 10.4964676464843 10.3359676361295 10.4915584993957 10.5212614786498 10.9784309093917 10.5847500031718 10.5368637734380 9.90846488647845 0.0991033245170368 0.0970124359092318 0.103266749152773 0.101740299853483 0.0993897626053512 0.101860471054939 0.0966797958074577 0.0975859218749008 0.11878921832514 0.107910013483473 0.0966797958074577 0.0979469161736918 0.100436876705680 0.0994219103391309 0.0983489766957625 0.0985746525002202 0.105890428232481 0.102359629267572 0.10092838144548 5 5 - 7517745 7518442 7517980.909 7517594 7520256 - gene protein_coding_gene TRUE TRUE AT5G22620.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT3G50520.1); similar to phosphoglycerate mutase family, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92756.1); similar to Os11g0150100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065757.1); contains InterPro domain Phosphoglycerate/bisphosphoglycerate mutase; (InterPro:IPR001345); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078) 0.519813197461682 5.48616953014431 0.000218403173994018 0.00403638032118573 8.91666217446004 19.9138184596260 0.519813197461682 0.0842367191531694 AT5G38890_at 5.30207179510857 5.1770608942144 6.33539917641755 6.43071684330375 5.13727394144494 5.52191427397326 4.52348716143418 4.81318022731238 4.37449682712319 4.18312870524454 4.183129142387 3.94830604121869 4.46216110890877 4.01672604550342 4.60196443890768 4.22799784991789 5.12288069502543 4.70900236939449 4.22166682345266 0.266108545573432 0.265216289569101 0.277543917531726 0.278146657779728 0.273197960367902 0.266014918912511 0.265216289569101 0.268984896492924 0.275934608462044 0.278558847719806 0.274294086652505 0.268482137070484 0.265216289569101 0.267981007393138 0.270082508808721 0.266803996218525 0.284171029378034 0.26909539418443 0.276879333901604 5 5 + 15586738 15588058 15587240.7 15586722 15588325 + gene protein_coding_gene TRUE TRUE AT5G38890.1 exoribonuclease-related similar to exoribonuclease-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22001.1); similar to Os02g0815800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048506.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029) 0.52581644103431 5.48203844266022 0.000219729458816885 0.00405916157584854 8.91062806772575 9.73953057915848 0.52581644103431 0.0876592237176321 AT5G38040_at 2.8061787260795 2.67211235357954 3.20528248181323 3.2746241021235 3.38921787568199 3.27106583313322 2.86194417401390 2.9860179724761 3.08266279396625 2.36314702261817 3.91932080436595 3.25975800322776 3.54397294552760 3.27115356186145 3.35910207805703 3.18044340623884 3.70370682461789 3.33724292170653 3.52808203335371 0.169669255620990 0.165429777961419 0.16754519050162 0.165516133621184 0.175816008644541 0.163607727599073 0.167484742887517 0.165740705471717 0.171382353284451 0.165174734811670 0.173158867288612 0.172113800007024 0.165682215282230 0.161467404302124 0.170857813519973 0.163860498140791 0.174558559045374 0.166286354475819 0.164252592451358 5 5 + 15203240 15203714 15203506.182 15202307 15203738 + gene protein_coding_gene TRUE TRUE AT5G38040.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G38010.1); similar to glucuronosyl transferase homolog, ripening-related - tomato (fragment) (GB:S39507); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 0.454512275769198 5.47753685622005 0.000221184472324363 0.00408430047604695 8.90404980989916 6.27737286561917 0.454512275769198 0.0395142066160728 AT5G64230_at 2.80473697171616 3.09612427727518 4.1096547530628 4.09224211373005 5.24582156267275 4.63310208046324 4.97669367561208 5.2963269822568 3.63896386406825 3.85673134795265 4.14477199605275 3.90689421620615 4.54031130850904 5.15823009676548 3.71217868073155 5.66915909238388 5.036959950649 4.49133629767592 3.98463660620467 0.260427881126843 0.250253957316325 0.250872428901201 0.239751279807569 0.246627368154991 0.257139770582663 0.246568546171029 0.250963863661701 0.243073559414695 0.237588349241724 0.243921854470355 0.240848340881801 0.244247039995869 0.245015572494621 0.248141869428133 0.248372453140126 0.253202340362378 0.237588349241724 0.24610422579747 5 5|0 +|/ 25710405 25711072 25710676.2 25709679 25711279 + gene protein_coding_gene TRUE TRUE AT5G64230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19920.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71289.1) 0.616218791448509 5.47522493424362 0.000221935725567660 0.00409642816026979 8.90067014493635 8.48646654090542 0.616218791448509 0.129825647596111 AT5G24800_at 8.42295669878432 8.70169226147813 8.49495745918947 8.61642281849931 9.84000298128899 9.59403719670835 8.61612297750943 8.41770659475664 9.43467842882347 9.22680395165921 10.1411834064740 10.4699953785897 9.52406155195453 9.54502891053524 10.1200245634227 10.2069187749392 8.95556954858374 9.95578407048406 9.70217611230937 0.130738057988734 0.114499466999637 0.121849957625211 0.122966985148017 0.113924320670828 0.121691234499201 0.123369641849632 0.125798857585657 0.12653490979492 0.118378232989497 0.115008372414996 0.115793236718887 0.115233606490731 0.118970606407484 0.117725940475871 0.113924320670828 0.131628854053477 0.118355708914729 0.114955600820052 5 5 + 8515739 8516510 8516296.091 8515203 8516672 + gene protein_coding_gene TRUE TRUE AT5G24800.1 BZO2H2 (basic leucine zipper O2 homolog 2); DNA binding / transcription factor Encodes bZIP protein BZO2H2. similar to BZO2H1 (basic leucine zipper O2 homolog 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G02640.2); similar to bZIP transcription factor bZIP16 [Glycine max] (GB:ABI34676.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.503501712740806 5.47015975795833 0.000223591164658482 0.00412522763323783 8.89326279293887 18.4976741768036 0.503501712740806 0.0758910457848648 AT5G25240_at 4.22249294633899 3.93123355587441 4.93064929935918 5.07723025770858 4.95205014391716 4.79591679930676 4.77191445458597 4.80570359246173 5.25283853482838 4.38499739308213 5.98155684699468 4.92474610649647 5.74893003584934 6.0435358056554 4.54565213814685 4.91701669861721 5.57094679351093 4.78781641368457 4.93101709807878 0.218146340768022 0.210581202007121 0.213812794458077 0.214250795450280 0.208186686251193 0.21515725862607 0.220471588079472 0.212135602001099 0.210558251371257 0.209841245696191 0.219042812282193 0.209485703464236 0.209578896202206 0.218695238569005 0.215118044830489 0.212663912306341 0.220241270712718 0.217415665682003 0.211589283567913 5 5 - 8746784 8747136 8746957.636 8746608 8747200 - gene protein_coding_gene TRUE TRUE AT5G25240.1 similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G14890.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80961.1) 0.482433125315323 5.46682533461094 0.000224688126006474 0.00414361441364140 8.88838436060714 9.77155360462702 0.482433125315323 0.0628351301637178 AT5G16650_at 9.29466054457757 9.10114534801915 10.0883708231455 9.88224151750356 10.3217027480644 10.1104441002812 10.0322029519363 9.82285484219411 9.29873545134535 9.47262138023038 9.85296941621101 9.85785809911711 9.82915293715417 9.97354113718454 9.42135228966738 10.0683187661703 10.1187304575858 9.8769212371926 9.49675948098378 0.0938822372666442 0.094383882039283 0.0929195048552413 0.095443991816213 0.0931836201920339 0.0911045382043841 0.0907024847842078 0.0932898936748836 0.10171724448407 0.0927631659841773 0.094209656221714 0.0906710702345721 0.0941739002065122 0.0945021147899031 0.100280798994221 0.0923151117673661 0.0906710702345721 0.0906846974114815 0.0950141926440496 5 0|5 /|- 5463579 5464692 5463987.8 5463180 5465332 - gene protein_coding_gene TRUE TRUE AT5G16650.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G33735.1); similar to Os02g0693200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047800.1); similar to DNAJ heat shock N-terminal domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19401.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.495061990291217 5.46655023668911 0.000224778883720173 0.00414361441364140 8.88798180214532 19.4804833494928 0.495061990291217 0.0710144882606403 AT5G18070_at 3.06377921026856 3.49655814654215 3.49222527490954 3.41186499347235 3.83224953923921 3.99983577620229 2.30893706257803 3.10042209627889 3.57330819387519 3.05252391083833 4.04301015883653 4.27176968342955 3.5096072571137 4.04741881588256 4.14709430086112 3.67590166014302 3.41465844604564 3.96940577409068 2.97179084252254 0.201345159066078 0.195614530893262 0.200445024629055 0.19839163800895 0.199625602652298 0.196651213590267 0.204832907599516 0.198140320678591 0.203298217550313 0.193337329286896 0.193301756960760 0.204654387691917 0.195028730387531 0.207518637498866 0.192083821953995 0.192083821953995 0.204952424727593 0.199535175255012 0.198564841267760 5 5 + 5982291 5982759 5982567.818 5981009 5982936 + gene protein_coding_gene TRUE TRUE AT5G18070.1 DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101); intramolecular transferase, phosphotransferases encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). Identical to Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (DNA-damage- repair/toleration protein DRT101) (DRT101) [Arabidopsis Thaliana] (GB:P57750;GB:Q05211); similar to Os07g0195400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059117.1); similar to Phosphoglucosamine mutase [Medicago truncatula] (GB:ABE93069.1); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843) 0.688635190005298 5.46141341325342 0.000226480771485631 0.00417321299388001 8.88046281478881 6.8802669680009 0.688635190005298 0.159387863132270 AT5G10300_at 4.11088619425772 4.7039423743989 4.95999551426107 4.20337201724043 5.15762122834306 4.41155968776056 2.93019755986793 3.09747267205259 2.12520289003683 3.01069097015435 2.81007690983527 2.77135525800813 2.85740924646192 3.17948639508556 3.06667413359774 3.46628900237816 3.35225195998308 3.10181662846168 1.99909612803891 0.26205082240091 0.269229375263509 0.267384915698303 0.265253393246763 0.283487767010829 0.261919922609456 0.253639838639711 0.253639838639711 0.264002298863363 0.257088156470453 0.256991216987071 0.257796716532868 0.253969209643865 0.259757780728481 0.253639838639711 0.253639838639711 0.262793286951687 0.257196066008793 0.264028362294228 5 5|0 +|/ 3239869 3240678 3240286 3239618 3240871 + gene protein_coding_gene TRUE TRUE AT5G10300.1 hydrolase, alpha/beta fold family protein similar to esterase, putative [Arabidopsis thaliana] (TAIR:AT2G23620.1); similar to 80A08_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67612.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.83492617870337 5.46079512115956 0.000226686542712831 0.00417523017718664 8.87955752163391 6.92388087492435 0.83492617870337 0.212567456494277 AT5G65710_at 5.02766646964548 5.54302296535488 5.3902962212431 5.55219969833846 6.32944418376094 5.94662107465792 6.0087771938747 6.15849775029238 3.9199184235061 5.78887740038758 5.7026208615768 6.40892138970116 6.56110125384587 6.32375640608769 5.80428893055514 6.23138630900584 6.15326506385902 6.21150897363736 5.66039348415796 0.258406392604226 0.247181337657297 0.254178218040102 0.247575124638838 0.249495292363368 0.255214008694557 0.251678418751106 0.255326878128759 0.272785510077347 0.246300005381145 0.246300005381145 0.246300005381145 0.257213894642665 0.262905158539619 0.259003008634943 0.25014682573524 0.257824879340206 0.250452526993489 0.248594171739807 5 5|0 +|/ 26311987 26312600 26312272 26309598 26312666 + gene protein_coding_gene TRUE TRUE AT5G65710.1 HSL2 (HAESA-LIKE 2); ATP binding / kinase/ protein serine/threonine kinase similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G09970.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia] (GB:AAT28308.1); similar to leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia] (GB:AAT28307.1); similar to leucine-rich receptor-like protein kinase [Malus x domestica] (GB:AAC36318.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.585846122778989 5.4602699602064 0.000226861475832733 0.00417667789633637 8.87878854355618 11.3934003202547 0.585846122778989 0.117470193045494 AT5G49820_at 7.3708326045743 7.38516396384915 7.11522819757796 7.40254631070474 7.8506123928862 7.86196572203969 7.64644437445285 7.48570971186293 7.07699606660242 7.00449949224777 8.38814087964807 8.57740569775425 7.86603381156826 8.03859417666425 8.27058506607204 7.91713013028375 7.51561684991069 8.09620890435165 7.58635470176932 0.173053802521811 0.170616421204330 0.176835771338758 0.178019563257601 0.165904794044903 0.173277313600954 0.174162983440521 0.173166912924723 0.183953734373628 0.164481650242935 0.175528685860781 0.174158606607873 0.170803197546593 0.180729481186466 0.17261274114657 0.171996010370418 0.181112572488095 0.166401403705699 0.164481650242935 5 5|0 -|/ 20263999 20265103 20264366 20263726 20266771 - gene protein_coding_gene TRUE TRUE AT5G49820.1 EMB1879 (EMBRYO DEFECTIVE 1879) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31190.1); similar to Protein of unknown function DUF647 [Medicago truncatula] (GB:ABE91893.1); contains InterPro domain Protein of unknown function DUF647; (InterPro:IPR006968) 0.473324089054558 5.45606384516973 0.000228267749879872 0.00420078460908303 8.8726281254744 15.1679785062792 0.473324089054558 0.0570612468383491 AT5G09650_at 9.30093684445175 9.49199604152943 9.67178907029112 9.71341337703759 9.83164324500915 9.58435157363864 10.2018488830044 10.1678772854005 9.7165653268544 9.7851471711096 11.0101329287825 11.1287217329464 10.2871782446231 10.6638184532058 10.9718842850652 10.7371761258714 10.0389731764549 10.7645645884759 9.5110754422868 0.142335352011578 0.141445677422590 0.143035368609359 0.136690249112426 0.134446505103926 0.144301219169022 0.150299176246704 0.135485271609079 0.136429296917618 0.142400959649987 0.136210522524567 0.141062894819813 0.133804050774513 0.141791882921628 0.132473630613830 0.135746252684952 0.142988811810891 0.138135490440105 0.143217284213033 5 5|0 -|/ 2991335 2992267 2991758.4 2991150 2993214 - gene protein_coding_gene TRUE TRUE AT5G09650.1 inorganic pyrophosphatase family protein Identical to Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) (Chloroplast inorganic pyrophosphatase 1) (PPA1) [Arabidopsis Thaliana] (GB:Q9LXC9;GB:Q8LBD6); similar to inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative [Arabidopsis thaliana] (TAIR:AT4G01480.1); similar to Inorganic pyrophosphatase [Medicago truncatula] (GB:ABE86848.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) 0.469505715704418 5.4456510354093 0.000231789291044756 0.00426378136341573 8.85736551000759 19.9310997927179 0.469505715704418 0.0548731861540653 AT5G13750_at 3.84071821376765 3.53277530547494 4.50383236848782 3.78231273809662 5.03697088037808 3.87227059956078 3.9320388871175 3.61746262221170 3.29290574189553 3.20888526743271 4.190232441832 4.72323194894601 5.02480021968682 4.48253503043104 4.30229610885569 5.61386274940759 4.19558398954068 3.64331132018192 3.14332531789456 0.226943054919432 0.222537104424559 0.234362125675759 0.222786653428658 0.232228190763318 0.232661198502301 0.224952180523208 0.219086234182154 0.233209054132324 0.219086234182154 0.226391471819669 0.232905793041143 0.219086234182154 0.232111011482106 0.230548724333036 0.230683433540706 0.254612197423569 0.228604304738274 0.226769000668054 5 5|0 +|/ 4440008 4440863 4440470.625 4438203 4441582 + gene protein_coding_gene TRUE TRUE AT5G13750.1|AT5G13750.2|AT5G13750.3 ZIFL1 (ZINC INDUCED FACILITATOR-LIKE 1); tetracycline:hydrogen antiporter/ transporter similar to ZIF1 (ZINC INDUCED FACILITATOR 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G13740.1); similar to transporter, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22349.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Tetracycline resistance protein; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701)|similar to ZIF1 (ZINC INDUCED FACILITATOR 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G13740.1); similar to transporter, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22349.1); similar to Os11g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065685.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Tetracycline resistance protein; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.937520419928578 5.43630872477608 0.000234998084206371 0.00432097410223969 8.8436578448711 7.88330795281246 0.937520419928578 0.249036687795832 AT5G51690_at 3.04456768235978 2.80459320929738 3.30776717624394 3.06642382259358 3.7791885540069 3.53965280967723 2.94141228237962 3.22773462056631 2.83481553916463 2.65348157478471 3.05869903657102 3.16045777502457 3.0537429973678 3.29809678248518 3.22086615974441 3.11133612754219 3.42995116941054 3.09684885293886 2.18051609017005 0.202338079449339 0.198130791795857 0.204769845562123 0.201782918856574 0.207778325353119 0.213497302080483 0.201567633270796 0.197933012142948 0.209592723517985 0.213802136912642 0.204442942066985 0.200791896722023 0.197933012142948 0.209703035888343 0.202722409200423 0.207214370170425 0.200391784499731 0.206063638871426 0.197933012142948 5 5 - 21016299 21016816 21016558.545 21014639 21018272 - gene protein_coding_gene TRUE TRUE AT5G51690.1 ACS12 (1-Amino-cyclopropane-1-carboxylate synthase 12); 1-aminocyclopropane-1-carboxylate synthase Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. Identical to Probable aminotransferase ACS12 (EC 2.6.1.-) (ACS12) [Arabidopsis Thaliana] (GB:Q8GYY0;GB:Q9C5W4;GB:Q9FLJ0); similar to ACS10 (ACC SYNTHASE 10), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT1G62960.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Rosa hybrid cultivar 'Kardinal'] (GB:AAQ88100.1); similar to Os06g0130400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056689.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.520579968287706 5.43209623797696 0.000236460393933341 0.00434601889610363 8.83747262824918 6.08142798497827 0.520579968287706 0.0874212515673936 AT5G28500_at 9.26285807942072 9.6358975697701 9.5904151864882 9.83132264744146 10.0947356885750 9.8174045015693 9.53705394208951 9.67688618527287 9.52663479751415 9.90701360075204 10.5482411183272 10.6407650765877 10.3055646670582 10.2749511916603 10.5345669571202 10.6587702625294 10.3192715297866 10.2308226862470 9.60363054090253 0.110114691129572 0.109015486890548 0.116692895606551 0.110929439098787 0.107519315631772 0.108148474973562 0.113575708296239 0.108259826060189 0.127946891474386 0.105920526796407 0.114020779910134 0.106129150084888 0.108147666350551 0.110959977341912 0.106946468412802 0.106479375021844 0.107846300624718 0.108385783469338 0.108979758640266 5 5 + 10478617 10479051 10478815.545 10477775 10479388 + gene protein_coding_gene TRUE TRUE AT5G28500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04550.1); similar to Os10g0445600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064712.1); similar to hypothetical protein Npun02004305 [Nostoc punctiforme PCC 73102] (GB:ZP_00109308.1) 0.532660884160928 5.43088011675765 0.000236884355631495 0.00435196625611577 8.83568648545259 19.7399278080221 0.532660884160928 0.093779104658086 AT5G62070_at 3.55213379745176 3.71767175906898 3.12481683848363 3.28266740567909 3.43374816117158 2.99055366334087 4.17916558000218 4.57091785494767 3.93588621638537 4.01444498354317 6.4017673136015 7.1554665483867 5.11208864695232 6.09359121450043 6.14335517309471 5.70770602056535 4.52380839516508 5.8866623388783 3.90189656545119 0.217863011114909 0.211903998184341 0.213417990205458 0.214236086778676 0.210956912219143 0.218409823829748 0.212404684057051 0.216712216825844 0.222729586196283 0.214137491610674 0.212305123409785 0.211942033630676 0.212505749413157 0.222452905297597 0.22054962971389 0.210721110903161 0.231631447062147 0.211817852676105 0.210877999342964 5 5 - 24947291 24947853 24947620 24947145 24949802 - gene protein_coding_gene TRUE TRUE AT5G62070.1 IQD23 (IQ-domain 23); calmodulin binding similar to IQD24 (IQ-domain 24), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G07240.1); similar to IQ calmodulin-binding re (GB:ABE86306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.565143693617141 5.42589071946783 0.000238632244853886 0.00438222106400874 8.82835608183723 8.5208585299447 0.565143693617141 0.109751429619177 AT5G02130_at 5.16836644595896 4.8300367321641 6.1155413527835 5.87443464233835 5.95405341463113 5.2090441272085 5.06173519361136 4.0415052154035 4.28194349347682 4.31638014815749 4.95252442866968 5.02281686810669 4.981572229652 4.98864401714902 4.76477781543891 5.17392178493244 5.67067217806577 4.43620161957577 4.16229474302664 0.221257078470172 0.223077779521587 0.224142556590225 0.21872668563168 0.221538656991719 0.223793654675101 0.214486196387403 0.221067912033124 0.214486196387403 0.218466415867561 0.226390801609946 0.215233776873687 0.214486196387403 0.223521090629601 0.225253465206614 0.218938290011570 0.214486196387403 0.235615691529731 0.216589874522329 5 5|0 -|/ 419756 420640 420129.3 419655 422015 - gene protein_coding_gene TRUE TRUE AT5G02130.1 NDP1 (RANDOM POTATO CDNA CLONE); binding mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain similar to Os05g0457700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055740.1); similar to unknown [Medicago sativa] (GB:AAZ32868.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.879104696800513 5.41901588577532 0.000241063184700488 0.00442498842358884 8.81824935690702 9.90805505513864 0.879104696800513 0.230137165338747 AT5G16870_at 4.89440883636482 4.89367051051798 5.35134378555775 5.62678112621334 5.87345062108848 5.40556926686321 5.20480188022159 4.83400808505027 4.59250452371051 4.42255402548644 4.9468480568231 5.12575958968388 5.16264003576787 4.94266499940239 5.30350103831051 4.60587500665167 4.93249712579236 4.9740876038658 4.3680716064624 0.203278309807715 0.191954762298228 0.201252511122295 0.194856489082417 0.202072361494935 0.197717795822674 0.194120157672292 0.198309765229066 0.210552290462998 0.206338859653377 0.191954762298228 0.194815876446165 0.191954762298228 0.201458713980171 0.205219307737894 0.191954762298228 0.205972404055605 0.200202276780025 0.201239511236254 5 5|0 -|/ 5547593 5548519 5548264.667 5546814 5548739 - gene protein_coding_gene TRUE TRUE AT5G16870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.2); similar to Os04g0652900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054102.1); similar to hypothetical protein DKFZp434A1535.1 - human (fragment) (GB:T46479); similar to Bcl-2 inhibitor of transcription isoform a [Homo sapiens] (GB:NP_001015509.1); contains InterPro domain Peptidyl-tRNA hydrolase, PTH2; (InterPro:IPR002833) 0.572877334354721 5.41585790326854 0.000242188676468388 0.0044437667450701 8.81360436649611 9.99064304761317 0.572877334354721 0.113778312068400 AT5G05560_at 3.24588639583123 3.09073876031466 3.75830550670512 3.42345164038652 3.45987763160768 3.69894682647637 2.40765002141895 2.58746506154600 2.52920599737709 2.79305115687454 2.72995833965343 2.90623309013756 2.93174282620705 2.41777996768733 3.41052066972181 3.07152896124256 3.67292036101551 3.15055539619389 2.98964422410375 0.205778987057065 0.213975320993587 0.209034204411197 0.214387860741387 0.222540359291747 0.215028704718892 0.202116275716777 0.211537167301439 0.203491275705973 0.203503276247915 0.211482877689995 0.203176422260632 0.205477699491258 0.205954979949776 0.201217394578702 0.203597718000033 0.202221461010698 0.203642963223367 0.20366912356868 5 5 + 1653679 1654588 1654201.909 1641453 1654757 + gene protein_coding_gene TRUE TRUE AT5G05560.1 APC1 (anaphase-promoting complex/cyclosome 1); ubiquitin-protein ligase Arabidopsis thaliana E3 ubiquitin ligase similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV43888.1); similar to Os05g0354300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055285.1); contains InterPro domain Proteasome/cyclosome, regulatory subunit; (InterPro:IPR002015) 0.508990750106742 5.4104772383616 0.000244119236355477 0.00447729461644594 8.80568657614929 6.11255960266958 0.508990750106742 0.0822119725231163 AT5G35700_at 5.08105618459162 5.20681538459376 5.50545428816624 5.7087109378809 6.22708719874451 5.42418096356451 5.53965818781518 4.95476881954758 4.71477383374905 5.34968527206649 5.69254226406161 6.45725045093821 6.1977604603949 5.59689024944972 5.71161723435993 5.98015595693933 5.89270800791685 6.3389571550084 5.07998820910199 0.221140759659216 0.217016046564523 0.214035709032423 0.224931661433801 0.220416814245203 0.211019891673466 0.213830467239858 0.209765972185347 0.227466526105822 0.212867588269728 0.208220752112196 0.208169045133657 0.208169045133657 0.225942659704321 0.213806574363125 0.209325798014982 0.209994037422077 0.215441281464131 0.208169045133657 5 5 - 13890145 13890798 13890380.455 13889765 13894087 - gene protein_coding_gene TRUE TRUE AT5G35700.1 fimbrin-like protein, putative Identical to Fimbrin-like protein 2 (FIM2) [Arabidopsis Thaliana] (GB:Q9FKI0); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT2G04750.1); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G55400.1); similar to Os02g0588300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047274.1); similar to Os02g0719100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047943.1); similar to fimbrin/plastin-like [Triticum aestivum] (GB:AAC49813.1); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 0.728059910181555 5.4096295548613 0.000244424873299918 0.00448100466503171 8.80443878339341 10.9717836592911 0.728059910181555 0.176810944915401 AT5G49010_at 3.23698567208054 3.44331519371228 3.83032702709089 3.42875986143453 3.34155227370426 3.49175276689146 3.00108975547051 3.34975794520967 3.20862457496036 3.23829064943579 4.04791076743505 4.59431332726456 3.51897684328091 3.78982213000366 4.57201632509960 3.58733131084118 3.62341198031551 3.71049926578331 2.85744352236183 0.248405316340114 0.250298721886821 0.257236222892500 0.244134670001705 0.241966570979611 0.247652518925505 0.251202380305261 0.250224160181728 0.261184933915588 0.256219484157092 0.249440846994786 0.254694406882655 0.241966570979611 0.241966570979611 0.24489133822573 0.241966570979611 0.242356231142567 0.246610131848047 0.247923462852700 5 5|0 +|/ 19884128 19885229 19884722 19883457 19885591 + gene protein_coding_gene TRUE TRUE AT5G49010.1 DNA replication protein-related similar to PREDICTED: similar to SLD5 [Bos taurus] (GB:XP_874005.1); similar to SLD5 [Mus musculus] (GB:NP_077202.1); similar to Os05g0143400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054616.1); contains InterPro domain GINS complex, Sld5 component; (InterPro:IPR008591) 0.547196584414506 5.40893469521685 0.000244675712756748 0.00448370740792865 8.80341586579161 6.90643664161875 0.547196584414506 0.102081388322586 AT5G64200_at 7.24499082681226 7.09535338072301 7.81334385547291 7.79991698005721 8.02156857959133 8.08063695034374 6.80027697863254 7.45075617309542 6.42406596523526 6.70211444411703 6.81860522377837 7.17791006934649 7.14186820370402 6.95864359399772 6.89430304367642 7.07415748682633 6.9176595711949 6.83003902313203 6.68579425552286 0.201092423226786 0.189450436309174 0.200075801476043 0.191739120554953 0.195945688025954 0.193194472158917 0.192191283764691 0.189896753841010 0.205236769940169 0.201327984156143 0.194496706350374 0.189874004002124 0.194053366764064 0.195651205277305 0.1938356701289 0.191295087479259 0.197222912460336 0.191868407513298 0.192709827586231 5 5|0 -|/ 25699167 25699983 25699531.111 25698428 25700867 - gene protein_coding_gene TRUE TRUE AT5G64200.1|AT5G64200.2 ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA binding encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks. similar to SCL30a (SC35-like splicing factor 30a), RNA binding [Arabidopsis thaliana] (TAIR:AT3G13570.1); similar to putative ar (GB:CAA76346.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.57683948677457 5.40723345203727 0.000245291007802144 0.00449308373141348 8.80091111767876 14.3286753815488 0.57683948677457 0.115983283443733 AT5G56590_at 4.01634857574515 4.2395624240033 4.43722662320637 4.49787289484716 5.34143310184791 5.29593028797576 5.0053020099658 5.28812343015723 4.19492943913246 4.63839371604699 5.45725158270377 5.78623138654512 5.10308702329363 5.62455150980606 6.02682749142397 5.34621603879532 5.22764892087502 4.45993565014475 5.20084099655221 0.234788216774367 0.227125472123301 0.220797752704924 0.220116643637174 0.219136426657058 0.237000066833931 0.227246629392200 0.229877681291968 0.228140278541885 0.221809338744493 0.220960633316627 0.223006096004782 0.221174842584991 0.218476552670163 0.22479627075176 0.218513119908702 0.244441067594059 0.231583692344658 0.218476552670163 5 5 + 22925952 22926614 22926246.818 22924545 22926785 + gene protein_coding_gene TRUE TRUE AT5G56590.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 13 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 13) ((1->3)-beta-glucanase 13) (Beta-1,3-endoglucanase 13) (Beta-1,3-glucanase 13) [Arabidopsis Thaliana] (GB:Q9FJU9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G29360.1); similar to Os01g0739700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044198.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91576.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91577.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 0.478347800103001 5.40591938051467 0.000245767401123296 0.00449990889725426 8.79897610091239 9.79373662731476 0.478347800103001 0.0637162864742937 AT5G67230_at 2.58644788954535 3.11192516277042 3.19701231180159 3.60915591962789 3.6473374254725 3.66332391323849 3.55410808441549 4.00776272679295 3.54810410781887 3.30546264086703 4.54060636023075 4.32920388056573 4.19829992209541 4.1822793219148 4.25443400926453 3.84739990177936 4.14636687047926 4.49495864458537 2.74338497906162 0.216501836832254 0.207860025729838 0.212223117308193 0.214943600959768 0.209360319291046 0.210244378906994 0.214453434262320 0.208089849652383 0.210331639330071 0.214593278100861 0.215935195915410 0.210829329494812 0.216249955991293 0.224618358569931 0.214576626849948 0.206969589570358 0.237404023925541 0.210303206425162 0.216473384746624 5 5|0 +|/ 26840731 26841283 26840949.3 26839704 26841554 + gene protein_coding_gene TRUE TRUE AT5G67230.1 glycosyl transferase family 43 protein similar to glycosyl transferase family 43 protein [Arabidopsis thaliana] (TAIR:AT4G36890.1); similar to glycosyltransferase [Poncirus trifoliata] (GB:CAI94901.1); contains InterPro domain Glycosyl transferase, family 43; (InterPro:IPR005027) 0.632178065634644 5.40556569805382 0.000245895790675668 0.0045003591722683 8.79845524584417 7.14622294076487 0.632178065634644 0.139740630608263 AT5G51290_at 2.51199338008775 3.81867545157573 4.94394066709063 4.67934872465997 5.21271604213956 4.21045858033287 3.33451831825989 3.07356431710013 3.06812929010476 2.41284978670771 3.03492012386013 3.07079354989116 3.45816933135886 3.34801756370816 2.98160459977727 3.77247893222997 2.68112958272400 3.72010770989793 2.67351721662260 0.354851795003057 0.334774521995193 0.344979767995135 0.331261136557186 0.340430143897032 0.333461559454363 0.333293876978314 0.33051994473446 0.344416273631513 0.330467165879884 0.326453209495327 0.326453209495327 0.326519703712724 0.34718995688757 0.327692053097811 0.326453209495327 0.342142173679936 0.326453209495327 0.326453209495327 5 5|0 -|/ 20863085 20864399 20863450.444 20861224 20865566 - gene protein_coding_gene TRUE TRUE AT5G51290.1 ceramide kinase-related similar to diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.2); similar to Os02g0656200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047623.1); similar to putative ceramide kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD25337.1); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) 1.05858268991790 5.39070471669437 0.000251355532979891 0.00459834176016429 8.77655272705518 6.9614359878188 1.05858268991790 0.292152149545074 AT5G02440_at 1.39618744278434 1.82686352591536 1.88169930668087 2.45598554340671 2.14218738927147 1.79204284335847 1.95264221521219 2.29502247322128 2.20272447484663 2.18906574745047 3.26261263577370 3.49119980507091 3.07996186858823 3.80599321055517 2.96814966594109 3.91897655723145 2.96206593036697 4.10855277860622 2.61993587467909 0.271825527839770 0.268007009924165 0.279564904748977 0.270639201539069 0.277392582561064 0.272294564010039 0.288799409363405 0.268338214041581 0.267061354455708 0.265151269491261 0.273957293620645 0.26850346223404 0.269745203966932 0.278804312354142 0.274811928840708 0.273042964437162 0.268856212665856 0.28082137152796 0.268433049110142 5 5|0 +|/ 531194 532679 532177.2 531064 532929 + gene protein_coding_gene TRUE TRUE AT5G02440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17950.1) 0.656373440293703 5.38734746847621 0.000252606733511029 0.00461928237561828 8.77160004384874 4.86129438690239 0.656373440293703 0.150379625217897 AT5G47030_at 10.2698834070303 10.6215910190355 10.9019892995354 11.1725617706151 11.0843575931258 11.0139695092644 10.9095443653007 11.0686755714980 10.7022500192791 10.6609453623079 11.4637988113289 11.3580469102595 11.1860397857378 11.3410599929637 11.5363817531160 11.1423262434782 11.2116670250450 11.4380916553167 10.5820390138810 0.0767751266072585 0.0721365524466991 0.0759901106864381 0.0721365524466991 0.0729554398693616 0.0771504553853308 0.0745085749398594 0.0721365524466991 0.0823721151486233 0.0758020651441404 0.0721365524466991 0.0725887797137614 0.0741733967383642 0.0748146322880422 0.0746910717104192 0.0731586615914759 0.0771033267076712 0.0743689701032718 0.0742551494719484 5 5|0 +|/ 19107651 19109168 19108136 19107525 19109541 + gene protein_coding_gene TRUE TRUE AT5G47030.1 ATP synthase delta' chain, mitochondrial Identical to ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) [Arabidopsis Thaliana] (GB:Q96252); similar to ATP synthase delta' chain, mitochondrial precursor (GB:Q40089); contains InterPro domain ATPase, F1 complex, delta/epsilon subunit; (InterPro:IPR001469) 0.506030504709392 5.37385866404708 0.000257701085745189 0.00470975110846464 8.75168369623653 21.8718655605815 0.506030504709392 0.0824846369883887 AT5G02250_at 7.46712512112906 7.25308668332991 7.83297461801396 8.11066474685216 8.7653363876416 8.37507819698852 8.18681364508373 7.50732523574176 7.81506269272567 7.57195444356439 8.28738665800078 8.4927029768509 8.26353004971102 8.36199899751762 8.59460713877254 8.60505338443743 8.28848199593127 8.35854888807638 7.93396301955421 0.15954734724557 0.155922171765172 0.159374365816251 0.152651551138404 0.163460835144171 0.163255149125929 0.155734897966132 0.157130862194441 0.162615393127230 0.160358216659978 0.162252396093654 0.157833327983645 0.153223129408422 0.155086570385714 0.158667035829239 0.150621545087316 0.164410177591615 0.158350174158887 0.158045939536526 5 5|0 +|/ 458215 459005 458573.5 454781 459525 + gene protein_coding_gene TRUE TRUE AT5G02250.1 EMB2730 (EMBRYO DEFECTIVE 2730); RNA binding / ribonuclease similar to ribonuclease II family protein [Arabidopsis thaliana] (TAIR:AT2G17510.1); similar to ribonuclease II-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81730.1); similar to Os01g0841800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044770.1); contains InterPro domain Ribonuclease II and R; (InterPro:IPR001900) 0.650152262633549 5.37367475449682 0.000257771294687167 0.00470975110846464 8.75141195975545 16.0273999859028 0.650152262633549 0.148558152409595 AT5G42310_at 9.4268672820738 9.61217549662633 10.1763479882014 10.0941888747575 10.2369093847788 10.2287418166537 10.1851411127680 10.0370904917474 9.74346743985903 9.69738284394107 10.2642984140318 10.37380295819 10.0706485569116 10.2684779515715 10.1007705943313 10.5543760818141 10.1639061125347 10.1386012965663 9.69258091573666 0.0749818972866579 0.0756467176460079 0.079095399713951 0.0771100485880919 0.0767569376362893 0.0780717618725846 0.0749818972866579 0.0776713858248708 0.0785232267206577 0.0770432491562912 0.0774538169059845 0.0749818972866579 0.0804705443329142 0.0749818972866579 0.0758045095596669 0.0749818972866579 0.083170383070007 0.0796326026365206 0.0807636079836284 5 5 + 16934717 16935442 16935038.545 16933011 16935797 + gene protein_coding_gene TRUE TRUE AT5G42310.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G22470.1); similar to CRP1 [Zea mays] (GB:AAC25599.1); similar to Os07g0548300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059927.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.449722466429466 5.37171835340381 0.000258519428480315 0.00472143064890678 8.74852094932945 19.9761847954123 0.449722466429466 0.0434622059040663 AT5G41890_at 1.21372146082387 1.23597680619417 1.54233886236392 1.49874295608542 1.89092223439508 2.17078788989782 1.27427527533574 1.01089466399765 1.39214109272506 1.51816122703934 1.90917774087605 1.76746936001470 1.46623771460628 1.94971267345501 1.62004659822822 1.60797726630861 1.73612670199679 1.56832430022475 1.09596291987021 0.195194827809410 0.194985146719391 0.193674497604654 0.194418348278808 0.209341593454441 0.197629046894749 0.208438899101387 0.204852056136886 0.198177447569884 0.197659518736406 0.218968594567250 0.198241256289924 0.193674497604654 0.202530233910354 0.198494159558223 0.197497838680452 0.198399320182675 0.193674497604654 0.202439817077841 5 5 - 16781528 16782508 16781894.727 16781520 16784128 - gene protein_coding_gene TRUE TRUE AT5G41890.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G50400.1); similar to H0404F02.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66728.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.479846616008318 5.36677646101239 0.00026041953847143 0.0047541304392472 8.74121561638961 2.99898541414104 0.479846616008318 0.0670438950292638 AT5G61170_at 9.2604678425674 9.16874016367645 9.52695684761018 9.56973629395304 9.47644200014967 9.2113060061788 9.69279884516724 9.55613331052355 8.29671038155765 8.70456971227307 9.4296238668571 10.0065076369216 9.18321151837294 9.12832116847833 10.2338792262727 8.99994964294823 9.098503212115 9.1091757564107 8.50217851872342 0.115827588933364 0.113514536713766 0.119384523525797 0.116666669159834 0.112366889355010 0.113435098944284 0.113776331685003 0.123096649859382 0.138329958942093 0.116651972974694 0.117652373150807 0.116822952709399 0.119764017996385 0.140357346949496 0.116682652830140 0.118245116077971 0.126423955323171 0.120138701176036 0.112366889355010 5 5|0 +|/ 24628400 24629403 24628927.444 24628312 24629653 + gene protein_coding_gene TRUE TRUE AT5G61170.1 40S ribosomal protein S19 (RPS19C) Identical to 40S ribosomal protein S19-3 (RPS19C) [Arabidopsis Thaliana] (GB:Q9FNP8); similar to 40S ribosomal protein S19 (RPS19B) [Arabidopsis thaliana] (TAIR:AT5G15520.1); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to 40S ribosomal protein S19-like [Solanum tuberosum] (GB:ABB87116.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) 0.462034439592475 5.36440897096836 0.000261335078672344 0.0047688362984031 8.73771456071928 18.3827223509275 0.462034439592475 0.0545104642875596 AT5G52440_at 10.3972589719769 10.2160441017629 10.7807682544669 10.8141113566967 10.9641111527057 10.7771988978948 10.8456595028912 10.7093014704637 10.5693737031026 10.6607048470844 11.2868220491914 11.2555455574332 11.1359863936166 11.1535937784336 11.3126096539061 11.2351747476370 11.1717689878478 11.1689197838622 10.5468566476321 0.0798125226074683 0.0755373499092909 0.08070115689981 0.0780399338028285 0.0744113477086587 0.0774881356871355 0.0740305441402343 0.074472119473617 0.0856434698613675 0.0758113349994126 0.0759096137343124 0.0776307440346687 0.0756467991433883 0.0786807154094183 0.0776882732936815 0.0750490659853787 0.0751327631703127 0.078440467605543 0.0740305441402343 5 5|0 +|/ 21304309 21305802 21305013 21303986 21306130 + gene protein_coding_gene TRUE TRUE AT5G52440.1 HCF106 (High chlorophyll fluorescence 106) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB similar to thylakoid assembly protein, putative [Arabidopsis thaliana] (TAIR:AT5G28750.1); similar to Bacterial sec-independent translocation protein mttA/Hcf106 [Medicago truncatula] (GB:ABE85329.1); contains InterPro domain Bacterial sec-independent translocation protein mttA/Hcf106; (InterPro:IPR003369); contains InterPro domain Twin-arginine translocation protein TatA/E; (InterPro:IPR006312); contains InterPro domain Twin-arginine translocation protein TatB; (InterPro:IPR003998) 0.457361145026002 5.35836342740171 0.000263688555584333 0.00480975818010506 8.72877049435243 21.5917388894060 0.457361145026002 0.0511844957420833 AT5G64900_at 2.92255119183172 2.85110704051023 3.25960710500355 3.02682998016369 3.32155857163873 2.99533912213617 2.82998454508980 3.14552258652669 3.19076493830565 3.2118895148127 4.13270572186742 4.52997624240986 3.93925222136338 4.27634503871462 3.96326041850089 3.94892488438373 3.88203350450204 4.0819143387062 3.42373981744935 0.225189050627836 0.224042936159234 0.223864842662281 0.232705516095390 0.233475613166844 0.225076680645881 0.220137535191758 0.224963242202774 0.264334664487465 0.220137535191758 0.236588737310172 0.233230974023249 0.225215504878422 0.234419716837986 0.229686521788341 0.222169906359385 0.228362151739474 0.234415287906087 0.220137535191758 5 5 + 25954506 25955139 25954751.091 25954396 25955302 + gene protein_coding_gene TRUE TRUE AT5G64900.1 ATPEP1/PROPEP1 (Elicitor peptide 1 precursor) Encodes a putative 92-aa protein that is the precursor of AtPep1, a 23-aa peptide which activates transcription of the defensive gene defensin (PDF1.2) and activates the synthesis of H2O2, both being components of the innate immune response. Identical to Elicitor peptide 1 precursor (PEP1) [Arabidopsis Thaliana] (GB:Q9LV87;GB:Q8LCK9); similar to PROPEP2 (Elicitor peptide 2 precursor) [Arabidopsis thaliana] (TAIR:AT5G64890.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1) 0.516189571598022 5.35312580841507 0.000265745759729623 0.00484524381334703 8.72101719405663 6.72894566944353 0.516189571598022 0.0891311895421884 AT5G42860_at 1.96922902471266 2.24647441341228 1.69081866301262 1.83641039560184 1.12353591602989 1.09298163781660 1.74164971739393 2.16502014277265 2.76141346867209 2.66633929648134 4.80089288809287 6.50538116092922 3.74514174941343 4.61099258201720 4.92516885734283 3.85418268311251 2.91170857443049 5.33846262317175 3.42851112026048 0.280713796751178 0.281449571908055 0.284268360324338 0.281073635444242 0.310675482804006 0.291165632855453 0.292375532749147 0.289328320795212 0.280664035467419 0.280664035467419 0.288537289666497 0.297567080965793 0.280664035467419 0.287850411314534 0.287448295905426 0.285989725173499 0.283185161998007 0.294463981569198 0.280664035467419 5 5 - 17200572 17201691 17201076.091 17200294 17202144 - gene protein_coding_gene TRUE TRUE AT5G42860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45688.1); similar to H0814G11.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86345.1); similar to CAA30379.1 protein [Oryza sativa] (GB:CAB53482.1) 0.519873378275751 5.34927123265711 0.000267270650828054 0.00487099822760475 8.7153085488293 5.50255466465327 0.519873378275751 0.0912833479345581 AT5G44870_at 8.62750655521056 8.80953836528782 9.5258435597807 9.29424077202047 9.5786396621245 8.96370423496819 8.47327013552134 8.38013905455606 8.3306412630447 8.82863374095089 9.26502340246047 9.14210548506173 9.09404023569478 9.0985794813675 8.60569267197253 9.43274593009643 8.75997948997354 8.77763062430182 8.75575835237735 0.133732577410065 0.136896059269352 0.134071570566294 0.139672971773063 0.133732577410065 0.142236051272255 0.135766552075433 0.140159167444687 0.152273856735347 0.140001036500561 0.133732577410065 0.133732577410065 0.133732577410065 0.142439707454247 0.140762036533693 0.133732577410065 0.168692991192341 0.146550316095711 0.137250980039999 5 5 + 18135119 18135794 18135525.364 18131893 18135835 + gene protein_coding_gene TRUE TRUE AT5G44870.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.575811871285655 5.33323262715484 0.000273716344053387 0.00498637476421366 8.6915309261488 17.7867698510539 0.575811871285655 0.119093097592982 AT5G18970_at 3.0526401974451 3.17528255636245 3.03117412227293 2.83610337924157 3.18646517039861 3.29994935059169 2.75265472843545 3.5632665481511 3.34860155854274 3.25881003403586 4.94202370109218 5.81878100535261 4.10802541349215 4.31467310321185 5.09364114003737 4.95249483049067 4.25358379921256 4.21353376720396 3.53611164580433 0.244526724728429 0.233413216690219 0.239951194784415 0.241287779256562 0.243642676148672 0.237836378425579 0.237090944720967 0.233413216690219 0.237996768515155 0.248136412163784 0.233413216690219 0.239456969764713 0.233413216690219 0.238063506491235 0.239169649684726 0.23821334848954 0.242893064172007 0.237774182348986 0.238126529914422 5 5|0 -|/ 6333731 6334501 6334178 6333213 6334644 - gene protein_coding_gene TRUE TRUE AT5G18970.1 AWPM-19-like membrane family protein similar to AWPM-19-like membrane family protein [Arabidopsis thaliana] (TAIR:AT1G29520.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85140.1); contains InterPro domain AWPM-19-like; (InterPro:IPR008390) 0.641691090122518 5.33241190618795 0.000274050599576158 0.00499036720685875 8.69031313072783 7.15882651051535 0.641691090122518 0.147153858776237 AT5G04200_at 0.665295347015492 0.729336371844209 0.725405887128789 1.01614147826866 1.26882771169592 0.927609560109869 0.757387422033016 0.704072317284387 1.13566953717825 0.98976298436998 1.59479489284949 1.91808971113165 1.43604970620273 1.66685228936454 1.83023280440761 1.75849922700148 1.43908235326811 1.76405345027469 0.738767176545868 0.194818259945953 0.195746481120891 0.194818259945953 0.200232367946000 0.194818259945953 0.210081767081030 0.194818259945953 0.210167462647747 0.207150121967869 0.210199847902284 0.195661750330789 0.198394504463138 0.210968292451323 0.198475459337118 0.202141690999063 0.207551840161210 0.204605384938359 0.204588892092612 0.197907980776854 5 5 + 1154302 1154837 1154508.818 1153791 1155041 + gene protein_coding_gene TRUE TRUE AT5G04200.1 latex-abundant protein, putative (AMC9) / caspase family protein similar to latex abundant protein, putative (AMC5) / caspase family protein [Arabidopsis thaliana] (TAIR:AT1G79320.1); similar to Peptidase C14, caspase catalytic subunit p20 [Medicago truncatula] (GB:ABD28668.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600) 0.495848433185519 5.33177776533497 0.000274309164029611 0.00499297856761023 8.68937211463737 2.16460453042783 0.495848433185519 0.0789062403152022 AT5G06970_at 7.72483887435851 7.62446240093731 7.97408323841077 7.9234019835609 8.3492596438901 8.33728482566529 8.10402311394009 7.79756493323221 8.5231531536432 8.31087373992989 9.49525472823555 9.2226834215259 8.76507430442018 8.95279598084619 9.17348251078037 8.68739896186228 8.45486127856644 8.91264987874784 8.27070007580625 0.119327031282174 0.124959047687935 0.113527575373346 0.119878087366134 0.118485732891735 0.125154180084652 0.125897405000107 0.117891065395808 0.134518755995542 0.117484967493065 0.114945345922639 0.118694304434664 0.114335327015521 0.118130061619816 0.118063953204998 0.118001410886270 0.120998349507441 0.120225699558695 0.117912410036107 5 5|0 -|/ 2158487 2159599 2158870.667 2158229 2166399 - gene protein_coding_gene TRUE TRUE AT5G06970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20010.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP68377.1); similar to Protein of unknown function DUF810 [Medicago truncatula] (GB:ABE85501.1); similar to unknown protein [Oryza sativa] (GB:AAK14418.1); contains InterPro domain Protein of unknown function DUF810; (InterPro:IPR008528) 0.461533951130689 5.32824961830052 0.000275752478917166 0.0050149721248207 8.68413549560947 16.6424986048742 0.461533951130689 0.0565293168373442 AT5G11640_at 6.09515337990271 6.21829225462556 6.85519601245857 6.53573360816665 7.75940749944698 6.60469621597945 7.12177408566782 6.29455183358062 5.49513521557637 5.86508310116808 7.27863846114022 7.2311554312193 6.72159036305234 6.95869773198952 7.17426810203875 6.55058867694213 6.54561784040975 6.84001426414023 5.31669239692913 0.246391137195207 0.242591844237497 0.244997301518769 0.249742316341636 0.246796090674251 0.250248394199238 0.249334893398060 0.246076401334090 0.251663667374309 0.245746402058437 0.24760246194805 0.245193311406596 0.241723186532486 0.248957560280917 0.241769557004943 0.23983932400303 0.23983932400303 0.255244712145200 0.256169905147663 5 5|0 +|/ 3742173 3743661 3742862.25 3741997 3743980 + gene protein_coding_gene TRUE TRUE AT5G11640.1 similar to Thioredoxin-like protein (ISS) [Ostreococcus tauri] (GB:CAL50184.1); similar to Os01g0200400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042316.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.929958283272032 5.32797668831031 0.000275864467022182 0.0050149721248207 8.68373032264616 12.9213714096074 0.929958283272032 0.252853781891702 AT5G23920_at 8.79614241481961 9.0482287528338 9.54028478439253 9.72536518775832 9.8567540758603 9.58932773535104 9.74767651697132 9.72410928750475 8.38810529319661 8.99263938300416 9.08613676398472 9.24724817823435 9.56984564781926 9.60063258398448 8.79575570001057 9.78708584683589 9.79644803708743 9.21535049699334 8.93363607959673 0.149429674785494 0.140975889524813 0.143941543782159 0.152531499321998 0.148103855159254 0.151441756412652 0.148256180265848 0.141441005645210 0.154558130713134 0.149467340276350 0.141180518740466 0.146574130486131 0.141439096636786 0.144353719283761 0.152355010217744 0.145879227824753 0.145747552232358 0.140731022305913 0.141700067334599 5 5|0 -|/ 8073399 8074000 8073661.3 8073227 8074173 - gene protein_coding_gene TRUE TRUE AT5G23920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52420.1); similar to unknown [Xerophyta humilis] (GB:AAT45003.1) 0.482373178872214 5.32100473274315 0.000278741659758111 0.00506515319113921 8.67337638490251 18.5828726738371 0.482373178872214 0.0713259318237687 AT5G25120_at 6.85892505607016 6.84166274996825 8.10532049940577 8.14397094861856 8.09435949148797 7.39518763218913 7.53032545179166 7.33154716226047 6.85683616994498 6.99402040133781 6.99011439079088 6.51088064627553 7.66848334128553 7.69685705803682 6.5077582486675 7.75389806437913 7.99828743009162 7.25034278775563 6.88274591364535 0.192678640058165 0.168211960158069 0.178254847688287 0.193447072104376 0.171960287200560 0.184163963987612 0.170576225546021 0.172539267947345 0.189672620423877 0.171409024593220 0.186062591660328 0.178149017966715 0.174869105956839 0.168211960158069 0.172683439090113 0.170407534139542 0.179457633036848 0.173684061756712 0.179873613804411 5 5 + 8664183 8664326 8664241.818 8662102 8664536 + gene protein_coding_gene TRUE TRUE AT5G25120.1 CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B11 (EC 1.14.-.-) (CYP71B11) [Arabidopsis Thaliana] (GB:P58049;GB:Q67Y45); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25130.1); similar to CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25140.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.589985727751837 5.32035522003773 0.000279011322788392 0.00506676410303215 8.6724114263623 14.6418016610838 0.589985727751837 0.126003041558624 AT5G64780_at 5.17768959483416 5.45478793898576 6.07887449803464 6.05586040874806 6.14953507874233 5.88866033005602 5.41945883761362 5.47106005324765 5.13247289195682 4.8180881784532 5.0580934531563 5.98578738320403 5.8579582094192 5.28701015723961 5.95168677470116 5.57564819659862 5.14948292826454 5.26703863788816 5.73676459578907 0.240400889950028 0.233858193396983 0.254776742576502 0.236141342022641 0.230404622815992 0.242887448675092 0.235419680538538 0.230570060599406 0.257132437043604 0.262823614130630 0.234862113226477 0.230404622815992 0.235009057250467 0.24564093935669 0.237453293862573 0.230404622815992 0.239092213475441 0.238741261496945 0.237494965694731 5 5 - 25917942 25919143 25918520.273 25917785 25919351 - gene protein_coding_gene TRUE TRUE AT5G64780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09830.1); similar to hypothetical protein MtrDRAFT_AC141113g10v1 [Medicago truncatula] (GB:ABE94618.1) 0.474981567442112 5.32012475534946 0.000279107073253935 0.00506676410303215 8.67206901747778 11.0848392290121 0.474981567442112 0.066582534090579 AT5G54520_at 3.65490422105954 3.94430261509431 4.33535319858645 4.16861689116635 4.67246997145405 4.24464024923588 3.03280751056962 3.42756480127837 3.5214441121099 3.46540281715819 3.83511033929353 3.42967751741435 3.9613667705017 3.6859049748994 3.95552386259334 3.98930450463425 3.06124257841701 4.03469327059087 3.35932095315615 0.223853070952290 0.222533076196663 0.234052468803739 0.235409478071815 0.232281773337773 0.229260271208927 0.223353521407623 0.227680901123532 0.230181915396529 0.228861488769672 0.238640242638485 0.226479632123152 0.222533076196663 0.234598503785031 0.238155552066707 0.223324908079586 0.227502970023277 0.227067045917935 0.226037231380393 5 5 - 22164039 22165301 22164379.364 22163740 22166346 - gene protein_coding_gene TRUE TRUE AT5G54520.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G10580.1); similar to Os02g0319800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046682.1); similar to PREDICTED: similar to pre-mRNA splicing factor-like [Strongylocentrotus purpuratus] (GB:XP_788503.2); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.567877820214266 5.31994713334509 0.000279180893191781 0.00506676410303215 8.67180511315647 7.53149523468947 0.567877820214266 0.116143277505411 AT5G01370_at 1.41336491911603 2.43734582407285 2.47883594446499 2.17047532841073 1.89231687589293 2.08935513020928 2.31486439988932 2.10200932998241 2.53019315649172 2.70560862277222 4.33943819491147 5.64211152172003 3.13802631687812 4.11765153497174 4.91268822191349 4.24834228029424 3.11596429934385 4.36094716176566 3.20953576950829 0.230075475949310 0.242806982693031 0.228145026979171 0.232560291180073 0.234953176058535 0.226040218652638 0.23619769222922 0.238760461768692 0.237024536454477 0.226040218652638 0.238562495103632 0.247515260457597 0.230443424869375 0.234584796194709 0.242897810118536 0.237837608886217 0.228958467019388 0.227310696113195 0.227697461710794 5 5 + 153323 154249 153745.909 152529 154387 + gene protein_coding_gene TRUE TRUE AT5G01370.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to hypothetical protein DDBDRAFT_0192009 [Dictyostelium discoideum AX4] (GB:XP_629009.1) 0.755066688348373 5.31327766723766 0.000281967824786124 0.0051152020790402 8.66189237830662 5.63707532287093 0.755066688348373 0.191751636194225 AT5G06000_at 2.68838765457879 2.75610066535330 3.14235235947381 3.1218485190854 3.03507240473962 2.84729795242702 2.93347750779792 2.88937025213559 2.66838901217058 2.57084139382017 3.21125678236051 3.72104302780358 3.4465279040096 3.2566687913567 3.74207986645507 3.40276072850273 2.74956823941459 3.3201168675578 2.86617444310566 0.214339522913451 0.214420232764295 0.220521148025038 0.217826180023470 0.234429055721312 0.236533792456168 0.220440592989527 0.226339920147851 0.234005102728679 0.215711750598440 0.212590859657437 0.218673829802830 0.214099105141706 0.220755717034569 0.21991377166085 0.215516328166984 0.229877720413968 0.222306583896829 0.217862597045069 5 5 + 1809151 1809680 1809378 1808171 1809854 + gene protein_coding_gene TRUE TRUE AT5G06000.1 EIF3G2 (eukaryotic translation initiation factor 3G2); RNA binding / translation initiation factor One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). similar to EIF3G1 (eukaryotic translation initiation factor 3G1), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G11400.1); similar to RNA-binding re (GB:ABE81433.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.437129974266083 5.31157995727756 0.000282681954279294 0.00512601238731872 8.6593680118398 5.95576561059795 0.437129974266083 0.0355542709351776 AT5G56720_at 1.55095313419671 1.52030462852136 2.12486357525675 1.84435563460456 1.85756504882781 1.81644321942007 2.28226921907685 1.75761506704237 2.01324577516724 1.52704990353564 2.6957554429895 3.20350253635320 2.20144622452079 2.56477195313985 3.16752315376054 2.51853762522204 2.35033037000294 2.79798489895637 1.68385866496992 0.220765430175715 0.212060171010520 0.223567626636704 0.222056241769891 0.204617158336232 0.217100717920545 0.209301019728320 0.208815659555510 0.217304228005708 0.213589033233537 0.204779259239079 0.213174694748925 0.21596307163483 0.216255722486064 0.221648126702302 0.208277911974750 0.217408530636155 0.204871424951789 0.208422827602895 5 5 + 22963372 22963915 22963618.727 22962763 22963944 + gene protein_coding_gene TRUE TRUE AT5G56720.1 malate dehydrogenase, cytosolic, putative similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G43330.1); similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT1G04410.1); similar to cytosolic malate dehydrogenase [Lycopersicon esculentum] (GB:AAU29199.1); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NAD-dependent, cytosolic; (InterPro:IPR011274); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557) 0.539559050855934 5.30819281464948 0.000284112488425553 0.00514854310088379 8.65433027284707 4.05872934428952 0.539559050855934 0.103337983690983 AT5G01260_at 4.28663707060144 3.80803746586488 5.12096140844161 5.06742213597434 5.25168362735274 4.89193247580363 5.97015044563719 6.30510064794497 4.01813452144148 4.1877499781467 4.96446320628917 4.98856049504125 5.65530615412117 5.58628180238325 5.02753351514678 5.42752269795615 5.45848990469716 4.90503700314155 4.08214086525175 0.206373774691841 0.199137094594239 0.214065483822024 0.201163544625939 0.203190485912828 0.210126907604929 0.210240900847645 0.207551924146684 0.206771249699529 0.200905088118513 0.202494890651956 0.200652996604648 0.206026256340563 0.202116149115787 0.202954893205561 0.199095831251135 0.222378092434190 0.197445086292878 0.207696467888617 5 5 + 105813 106401 106167.091 105324 107404 + gene protein_coding_gene TRUE TRUE AT5G01260.1|AT5G01260.2 glycoside hydrolase starch-binding domain-containing protein similar to PWD (PHOSPHOGLUCAN WATER DIKINASE), catalytic [Arabidopsis thaliana] (TAIR:AT5G26570.1); similar to Glycoside hydrolase, starch-binding [Medicago truncatula] (GB:ABE80775.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) 0.573079698390689 5.30807605068813 0.000284161939955339 0.00514854310088379 8.6541565771619 9.76156956084945 0.573079698390689 0.119085824386396 AT5G45650_at 10.0096648917108 10.1162284863141 9.7020373925764 9.7202802999597 10.6135183175706 10.4420094075413 10.2277640681270 10.0231031657714 9.21839670285017 9.86680843556517 10.3233589362852 10.6068592824463 10.2121620210882 10.3837527677914 10.4442080741758 10.1176017463798 10.2517429089808 10.2851094835064 9.26704634287702 0.0742339698282827 0.070678194787846 0.0740820695633 0.0711981295649706 0.070633613035683 0.0739107988908996 0.0702236266463954 0.0708990664680386 0.0796185616402408 0.0743096145945123 0.0710345967341448 0.0702236266463954 0.0729411293682866 0.0721767627576707 0.0727384776083502 0.0702236266463954 0.0702236266463954 0.072506668790664 0.0755834926152838 5 0|5 /|- 18530750 18531168 18531040.667 18530658 18536095 - gene protein_coding_gene TRUE TRUE AT5G45650.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G45640.1); similar to subtilisin-like proteinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAB21149.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.451310055124383 5.30601483852582 0.000285036408068814 0.00516222979191696 8.65109001764377 19.9962507018693 0.451310055124383 0.0498535599587589 AT5G43380_at 2.15496511603459 1.77601373790503 2.89742318422942 2.38923053596234 1.99502821525407 1.98393882709605 1.47253040400025 1.14479216888431 1.72642201158215 1.71718760563385 2.12466937204412 1.66066848384597 1.48289662472620 1.85484556098967 2.09155958146584 2.40603002320455 2.48998646041675 2.33148988473525 1.26943317443571 0.212334603382842 0.217940380469806 0.217993551260893 0.225476140998901 0.212943327114542 0.221471073778030 0.219746453249696 0.220206085484760 0.217432001931937 0.218907306307322 0.213457059506294 0.214561158273572 0.222586386232616 0.212334603382842 0.215239029402632 0.222434378569058 0.217127079181361 0.221350938780721 0.229430850959122 5 5 - 17437941 17438480 17438252.364 17437047 17439210 - gene protein_coding_gene TRUE TRUE AT5G43380.1|AT5G43380.2|AT5G43380.3 TOPP6 (Type one serine/threonine protein phosphatase 6); protein phosphatase type 1 encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) (TOPP7) [Arabidopsis Thaliana] (GB:O82733;GB:O48641;GB:Q8L761); similar to TOPP4 (Type one serine/threonine protein phosphatase 4), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT2G39840.1); similar to catalytic subunit of protein phosphatase 1 [Vicia faba] (GB:BAF31132.1); similar to protein phosphatase 1, catalytic beta subunit [Medicago sativa] (GB:CAA05491.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843)|Identical to Serine/threonine-protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) (TOPP7) [Arabidopsis Thaliana] (GB:O82733;GB:O48641;GB:Q8L761); similar to TOPP4 (Type one serine/threonine protein phosphatase 4), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT2G39840.1); similar to protein phosphatase 1 catalitic subunit [Medicago sativa] (GB:CAA05493.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.581791909487033 5.29730069264602 0.00028876514696017 0.00522757652105229 8.63811842442334 3.78988153007698 0.581791909487033 0.123512938554432 AT5G01620_at 3.60854317411550 3.62307410693497 4.24300216975262 4.52880997919652 4.1237897740634 4.07193418616804 4.33684365858309 4.04354968408117 4.13137720780404 4.30198619640699 5.5100491116771 5.70930553643107 4.03498283049818 5.10441682549336 5.02494187364355 4.53263087017620 4.49221804309836 4.95055140970984 4.4662948801872 0.246085807756535 0.235191529236423 0.234197185992868 0.238189421214469 0.234197185992868 0.234197185992868 0.239988474873266 0.235151775557083 0.252444937330523 0.248092301564083 0.245056136453385 0.238894064417802 0.243241120155416 0.237838382730832 0.234197185992868 0.234785012978453 0.244681005098269 0.243984200160496 0.236853420465156 5 5|0 +|/ 234056 234791 234481.333 232562 234913 + gene protein_coding_gene TRUE TRUE AT5G01620.1|AT5G01620.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38320.1); similar to Os03g0817900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051703.1); similar to Os03g0817500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051701.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE79610.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.479441169579004 5.28599361437971 0.000293680927385542 0.00531434899877703 8.62126981962155 8.6823299203071 0.479441169579004 0.0714796647284674 AT5G19240_at 9.79713307084537 10.2753814722009 10.8213574927315 10.7946338013999 9.84298018917965 9.20538514485597 9.29053147031742 9.22700713905768 9.9859930023822 9.14913762619639 10.3395002810871 10.5781893761993 9.77523615839195 10.5906221650684 9.47369303898654 9.91175734037158 9.38437739086405 10.3228441151647 8.87356608192859 0.151826867095858 0.138263963598841 0.141867382262931 0.144779918408355 0.144675360016414 0.154254021148613 0.142728479428767 0.148128267920591 0.142414136049168 0.147529530124073 0.147364503207357 0.147288697478330 0.142537916431800 0.146751659586344 0.142898462732245 0.141838155339996 0.160739594534876 0.142955429374210 0.146996064111411 5 0|5 /|+ 6470507 6470940 6470709.3 6470131 6471064 + gene protein_coding_gene TRUE TRUE AT5G19240.1 Identical to Putative GPI-anchored protein At5g19240 precursor [Arabidopsis Thaliana] (GB:Q84VZ5;GB:Q8H7A4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19230.1); similar to Os07g0645000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060451.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC07018.1); contains domain PR-1-like (SSF55797) 0.614685557683695 5.28239984937363 0.000295261910392352 0.00534072890446975 8.61591069280463 19.5984310826248 0.614685557683695 0.138443565595906 AT5G61300_at 4.34308941379546 4.408623361992 4.66967895464087 5.07210229827631 4.50003268562885 5.04612875728743 3.78337709830182 4.46804302528711 4.28869921334816 4.41429673409387 5.53570203476887 5.95527417246682 5.16078036404622 5.43494896035014 4.80887259374764 5.20121128048662 5.22710865908481 4.84679103864821 4.70984185317029 0.193763711052070 0.188717488660097 0.193536458830509 0.188717488660097 0.189030258019811 0.196618551202954 0.192478537034284 0.191867979235361 0.194179225144863 0.192249018799518 0.190613031242051 0.191882033584768 0.201405405299777 0.194398920663532 0.199883743298219 0.188717488660097 0.195343732786365 0.195383285855771 0.196452802989672 5 5 - 24668132 24668649 24668395.455 24667930 24670002 - gene protein_coding_gene TRUE TRUE AT5G61300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07790.1); similar to Os12g0577800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067117.1) 0.685796326763374 5.28151953755863 0.000295650559542571 0.00534463378710258 8.61459764618968 9.4075254851449 0.685796326763374 0.167177218255744 AT5G65170_at 1.11727779065794 1.48437275424868 1.73888599792670 1.76131743016548 1.67661302893415 1.92957661867618 0.914547822136657 1.27730492028223 1.80863164508692 1.53615710131355 1.63812179565883 2.09105518102667 2.17008356059352 2.27183832485753 2.07228883077387 1.99473089681791 1.60858278741846 1.86036432671000 1.10477784374347 0.238020478181754 0.237509240634976 0.229038749666307 0.230112747993242 0.231901679930373 0.231351795604916 0.237620169295472 0.242641380451326 0.246837472644816 0.233171981347924 0.253657899094152 0.229038749666307 0.244764293318091 0.234090970950624 0.245794239757978 0.229038749666307 0.234648716483952 0.230491460214715 0.232887312211646 5 5 + 26058942 26059438 26059169.909 26058400 26059632 + gene protein_coding_gene TRUE TRUE AT5G65170.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT4G39720.1); similar to VQ [Medicago truncatula] (GB:ABE94086.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.529208398347519 5.28135257950204 0.000295724331286401 0.00534463378710258 8.61434860325657 3.21077308356021 0.529208398347519 0.0995395580849067 AT5G44750_at 5.63922944278309 5.3345246729962 6.77292628937454 6.42042226678274 7.7771130425417 6.41854420909571 5.84712713516394 4.85626816849287 4.90752607680385 5.16232608433186 5.6051624828428 5.91162690686264 6.57838818932233 6.16268630469681 5.57885141316785 6.80241387986018 6.43983941168973 6.45948212501841 6.39994638518202 0.255538277161722 0.256167043134646 0.266329835604793 0.266889466983780 0.258376818391193 0.256759030516048 0.25245959383236 0.256882249630646 0.270639505566799 0.261234274334427 0.264182991992254 0.251532659823562 0.253144731983719 0.256157260951229 0.260897303705004 0.254107285632335 0.251532659823562 0.251532659823562 0.251532659823562 5 5 + 18075954 18077016 18076288.444 18069835 18077396 + gene protein_coding_gene TRUE TRUE AT5G44750.1 REV1 (Reversionless 1); damaged DNA binding / magnesium ion binding / nucleotidyltransferase Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49980.1); similar to PREDICTED: REV1-like isoform 3 [Pan troglodytes] (GB:XP_001160264.1); similar to Os06g0691000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058419.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126); contains InterPro domain DNA repair protein, Rev1; (InterPro:IPR012112) 1.06516879374983 5.27565085850931 0.000298255472275238 0.00538813317490047 8.60584108417719 11.9743889973814 1.06516879374983 0.301960050008998 AT5G52120_at 3.34318696274512 3.60748473944087 4.2329564766257 4.73060462870965 5.69431287141577 5.10188927678758 5.2762527954766 5.03014088727684 3.28845949800454 4.55175594551942 4.28072706241732 3.31736058387618 5.58467803569752 5.09235449115091 3.47960444298718 5.04501933088792 6.04069083730598 4.20963917807633 4.11342900850756 0.257620875160178 0.249511125119153 0.250702701777608 0.252869202686398 0.250244788281860 0.259189436622648 0.254144890564517 0.246906297423687 0.259200751534573 0.254882974525976 0.249805106180466 0.248822057581972 0.252046236457842 0.249306470578793 0.269931020994087 0.249010972262683 0.260466462599460 0.249528326701625 0.249800703560254 5 5 - 21193978 21197061 21194536.455 21193659 21197536 - gene protein_coding_gene TRUE TRUE AT5G52120.1 ATPP2-A14 (Phloem protein 2-A14) similar to ATPP2-A13 [Arabidopsis thaliana] (TAIR:AT3G61060.1); similar to Cyclin-like F-box; Galactose-binding like [Medicago truncatula] (GB:ABE86301.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.636192780886278 5.27440646028999 0.000298810950502482 0.00539591986489781 8.60398366339146 8.93500727779831 0.636192780886278 0.14776109946668 AT5G46850_at 3.32095744303396 3.91374552645724 3.95512091382587 4.37774661977573 4.58508160979622 4.81394983572652 3.79708587584911 3.08683049557887 3.28578591797476 2.94073827801247 3.29361980739108 3.77244369818608 3.41970621057725 3.92672918253762 3.77300646625377 3.6006150314761 3.27380820942596 3.64136679899105 2.93538107139580 0.224857400005901 0.235996007452321 0.224218905156988 0.227032742481184 0.2240326351262 0.236948747573949 0.222739060701663 0.222278976136557 0.23903197170702 0.225682886343628 0.224824777563926 0.221009705723969 0.223599089345638 0.224545266788566 0.223144835364170 0.221009705723969 0.228486181384820 0.231481871828456 0.226673015588637 5 5|0 +|/ 19028488 19029179 19028854.1 19027941 19029237 + gene protein_coding_gene TRUE TRUE AT5G46850.1 similar to hypothetical protein MtrDRAFT_AC150505g14v1 [Medicago truncatula] (GB:ABE89245.1); contains InterPro domain PIG-X/PBN1; (InterPro:IPR013233) 0.71850670634757 5.26836600512699 0.00030152298699455 0.00544262692801504 8.59496417404598 7.30212996403838 0.71850670634757 0.180413414467764 AT5G46510_at 2.48948918477754 2.64814780464434 3.06888071282944 2.5751336519792 3.8454951082716 2.3726887365925 2.77896937176251 2.33886660553592 2.47071744156587 1.68103867663322 4.42932258741469 4.56163327305933 3.4056456484897 3.94015875381881 3.49300860829092 3.5509347549067 3.04177781832476 3.24945499112409 2.17671526246089 0.235369269179624 0.240734814410378 0.233009342494919 0.235883244447397 0.248221040600182 0.245101869012386 0.232532654954445 0.246285391590470 0.238934576284328 0.247365414063976 0.23274536618631 0.232532654954445 0.23463917246993 0.238609347286902 0.247583403303925 0.235287936392393 0.241219139546156 0.236811297654738 0.238091421130369 5 5 + 18881699 18882106 18881885.727 18877678 18884240 + gene protein_coding_gene TRUE TRUE AT5G46510.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46520.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.00059145247337 5.26691754482478 0.000302177199173318 0.00545216591085807 8.5928005356499 5.67395015437344 1.00059145247337 0.280743939935033 AT5G38480_at 10.3512823789571 10.3465708732206 10.5722796864708 10.7864318435597 10.7912945124873 10.3273882387365 10.7438962964422 10.7219116527178 10.4725693038662 10.0607261492678 11.0571994905890 11.4208043298577 11.0239070061481 11.1825931766443 11.246827297583 10.9800121495246 10.6687418808471 11.1221959989543 9.92763376977326 0.1106222481709 0.105649491208032 0.106768276666732 0.107497182559361 0.106696378197007 0.116041556425803 0.109396215899169 0.108396301675400 0.112764091758726 0.115297644369389 0.107133927149566 0.104193155874524 0.109520581330323 0.105395352822807 0.110230305919704 0.103562596103404 0.119574128022561 0.106454769210521 0.112919529283656 5 5|0 +|/ 15427824 15428491 15428037.25 15426927 15428746 + gene protein_coding_gene TRUE TRUE AT5G38480.1|AT5G38480.2 GRF3 (GENERAL REGULATORY FACTOR 3); protein phosphorylated amino acid binding general regulatory factor, a 14-3-3 gene Identical to 14-3-3-like protein GF14 psi (General regulatory factor 3) (14-3-3- like protein RCI1) (GRF3) [Arabidopsis Thaliana] (GB:P42644;GB:Q945L2); similar to GRF5 (GENERAL REGULATORY FACTOR 5), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G16050.1); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to 14-3-3 family protein [Malus x domestica] (GB:AAV50005.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 psi (General regulatory factor 3) (14-3-3- like protein RCI1) (GRF3) [Arabidopsis Thaliana] (GB:P42644;GB:Q945L2); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to 14-3-3 family protein [Malus x domestica] (GB:AAV50005.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.506287680972628 5.26229637313224 0.000304274511219929 0.00548772389508264 8.58589552282752 21.2008460556095 0.506287680972628 0.0885078938137091 AT5G58380_at 6.4413999005242 6.97128759056534 7.32647631162005 7.35295315426357 7.42967143710452 7.05599090820794 6.93245865062276 6.99765197041661 6.83340099305005 6.94840571628232 7.82345748534844 7.88403692450737 7.88433256512706 7.44628580792379 7.68163865735873 7.77169995953765 7.39792599624603 7.5125792358876 7.28284598708398 0.207604766036642 0.210966190891208 0.210025298242334 0.220799086457187 0.210041654758895 0.224195380595701 0.224575098763669 0.231253601955538 0.235037102673679 0.207001296769482 0.222958247210009 0.216541379696955 0.209086526542028 0.217835544977955 0.209634316671098 0.211329978892620 0.223852712210808 0.212221884596475 0.212930802558279 5 5 - 23614380 23614883 23614660.818 23614188 23616468 - gene protein_coding_gene TRUE TRUE AT5G58380.1 CIPK10 (CBL-INTERACTING PROTEIN KINASE 10); kinase Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); similar to CBL-interacting protein kinase 14 [Populus trichocarpa] (GB:ABJ91221.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.554633552476712 5.26178022132134 0.000304509725421606 0.00548968252430698 8.58512408049264 14.4118839793144 0.554633552476712 0.11286684263125 AT5G47110_at 11.1487522530284 11.2620565236337 11.5344938758169 11.4530960917745 11.9183647801778 11.6438960942903 11.5943858731183 11.5480093002071 11.3560719218151 11.6730110987637 12.4250720904914 12.3050574625552 12.0984177234440 12.2253073407928 12.2897559684879 12.2044999207707 11.9180844133649 12.0196377344468 11.5638762803492 0.0854406683174988 0.0828495976272193 0.0818144949208753 0.0828705858152827 0.0822644104377723 0.0865678138859434 0.08245921975619 0.0831371876772263 0.0960119775720995 0.0804682445292685 0.0804682445292685 0.0814837921741292 0.0804682445292685 0.0837503766889315 0.0806955556352888 0.0822706302862962 0.0884290706895667 0.0877985504356221 0.0804682445292685 5 5|0 -|/ 19151565 19152246 19151859.444 19151213 19152544 - gene protein_coding_gene TRUE TRUE AT5G47110.1 lil3 protein, putative similar to LIL3:1, transcription factor [Arabidopsis thaliana] (TAIR:AT4G17600.1); similar to Lil3 protein, putative [Brassica oleracea] (GB:ABD64919.1) 0.451952185584788 5.2564682589849 0.000306941693553252 0.00553122600951871 8.5771824468749 23.3712396067243 0.451952185584788 0.0538829263521 AT5G04050_at 2.17057858870237 2.20413774644812 2.67169491132673 2.54444334954016 3.09842430304982 3.04861564854914 2.26511646038560 2.66265999527645 2.30624262342191 2.04210557456844 2.70172120375967 2.90099838047961 2.67707584577944 2.66221229472662 2.71461658764196 2.76685863926 2.55135467236510 2.66510582175830 2.43836936541725 0.21124945565784 0.203918236635529 0.211534713023732 0.211133808108228 0.210784573109684 0.214534277516303 0.222178019012708 0.206035735757946 0.220236409665217 0.206137746741777 0.203524529833087 0.206151617214166 0.210561940165526 0.222615511989846 0.217457052404258 0.207816106253611 0.212426457295289 0.205103223440010 0.211197777497824 5 5 + 1097680 1098340 1098122.455 1096015 1098920 + gene protein_coding_gene TRUE TRUE AT5G04050.1 maturase-related similar to intron maturase, type II family protein [Arabidopsis thaliana] (TAIR:AT1G74350.1); similar to cob intron3 ORF [Marchantia polymorpha] (GB:AAC09440.1); similar to hypothetical protein MapooMp76 [Marchantia polymorpha] (GB:YP_717178.1); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 0.478962549166064 5.25462740234428 0.000307789303224751 0.0055441959924075 8.57442927775973 5.06682493467173 0.478962549166064 0.0729792140835259 AT5G23590_at 6.67825838119383 6.83249726115349 6.9120348407059 7.54633308109226 8.07453343244778 6.90528813170827 6.22815836134663 6.09003185680974 5.44547386473906 5.78596928715375 6.79729361285289 6.99028736109207 6.79167456243924 6.54484089011362 6.18456889696609 6.95154571726754 6.91080324446423 6.23158369666376 6.3429043864024 0.283969780025107 0.281539266528013 0.272563307452977 0.268822341131429 0.269122274341448 0.281652892311876 0.278275445456899 0.280618938951930 0.279458272272143 0.278835107447484 0.277183625472156 0.275670360538881 0.268822341131429 0.284923814846416 0.279924339321502 0.278008159294376 0.286451927830572 0.278838808257157 0.280577354597734 5 5|0 -|/ 7953861 7954432 7954084.833 7953532 7955643 - gene protein_coding_gene TRUE TRUE AT5G23590.1|AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding / nucleotide binding / unfolded protein binding similar to GFA2 (GAMETOPHYTIC FACTOR 2), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G48030.1); similar to unknown [Sorghum bicolor] (GB:ABE77203.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.859759903998326 5.25050085557771 0.000309698400840501 0.00557395303636134 8.56825577726999 13.1751122152227 0.859759903998326 0.232971520275630 AT5G23140_at 6.53513732707988 6.92429433273318 6.32160536206463 7.21921579301178 7.9677122458712 7.09407367040785 6.9938244062479 6.95879139187726 5.22431573559031 5.64753353832981 6.80969635477841 7.28219211574086 6.85615302811462 6.97384961972624 7.05032012003311 6.9763208288829 5.91570322065915 6.33393474715532 5.28749918846717 0.221505391094984 0.221505391094984 0.234210633238890 0.227222844686493 0.2258157322549 0.249095950819725 0.222659526969600 0.227684533767128 0.250231737420982 0.221956283847706 0.222821746152189 0.223182043884968 0.222081890203498 0.228122348212848 0.235776522191253 0.221598931393098 0.247807722578633 0.221513705361374 0.233039138867861 5 5|0 +|/ 7783945 7784653 7784206.4 7783761 7785500 + gene protein_coding_gene TRUE TRUE AT5G23140.1 CLPP2 (Clp protease proteolytic subunit 2); endopeptidase Clp One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). similar to CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G02560.1); similar to Peptidase S14, ClpP [Medicago truncatula] (GB:ABE89066.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) 0.842980835139102 5.24955381041103 0.000310138314238426 0.00557955447054793 8.56683858943204 13.0824421870861 0.842980835139102 0.227065876628821 AT5G19670_at 3.52308853877707 3.80052689441736 4.00210959299398 4.47007628673202 4.73048005214671 4.39514822922278 4.00676026299892 3.24348964929578 3.59024739018017 3.76687157558079 4.59971044769038 4.57689744987536 4.0482423150115 4.22057208235118 4.05045914553987 4.22942489303652 4.47835071359279 4.16584887925939 3.63159921756632 0.237378011407387 0.237378011407387 0.23880663876753 0.238543109164522 0.253849983381201 0.248101666564714 0.244161031300363 0.237378011407387 0.245437592023706 0.241518134146857 0.239944664104859 0.241326809255411 0.237378011407387 0.240869554878395 0.239947832352932 0.237735239112783 0.264795333282627 0.249419342367304 0.245195101812103 5 5 + 6648772 6649255 6648982.364 6646721 6649500 + gene protein_coding_gene TRUE TRUE AT5G19670.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G25820.1); similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G32790.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE81272.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.694634691793561 5.24875726501093 0.000310508833289309 0.00558390333448968 8.5656465085008 8.00100708927493 0.694634691793561 0.172273664781192 AT5G55860_at 6.42816049789204 6.63348310544105 6.29342959647956 6.69752051881984 7.02023732957512 6.28537958242317 5.77984353305507 5.25441581739883 5.65340581418183 5.83645289180683 7.07018523482577 6.68438480693898 7.01252477137312 6.86261877990938 6.16722477960923 6.47089894622157 6.59565600468293 6.76924031214852 6.06528584873663 0.204941649574173 0.201727823361899 0.199148902088021 0.196323410126211 0.199061704464155 0.208040799333034 0.194841822261927 0.198099442097413 0.210946853726236 0.194252553505754 0.192421169716715 0.202075993374465 0.191895956729827 0.196609091280807 0.200681197610736 0.191895956729827 0.196741211586691 0.200486743351322 0.200190429330513 5 5 + 22628816 22629356 22629070.273 22626758 22629619 + gene protein_coding_gene TRUE TRUE AT5G55860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12150.1); similar to Prefoldin [Medicago truncatula] (GB:ABE89308.1); contains InterPro domain Protein of unknown function DUF827, plant; (InterPro:IPR008545) 0.701271435633134 5.24735927531166 0.000311160257239477 0.00559329803167212 8.5635540945557 12.5769620256550 0.701271435633134 0.174908279204785 AT5G13480_at 5.04880825526356 5.28392942714922 5.843048979047 5.868393838091 5.66397866281484 6.03913720191289 5.10296332696869 5.17786560910717 4.9140022608382 5.09289092892234 5.32426443680565 4.9554075756157 5.33903790261165 5.03195473302183 5.20180920138763 5.40568175238136 5.24332014035613 5.30765311068617 4.8564086914231 0.209929334092084 0.205865533543910 0.211084094507848 0.203338137487688 0.206810616109177 0.214063718976908 0.206289041873057 0.213039575003696 0.214292052187179 0.211352041825672 0.20332612681617 0.202042244761194 0.215472101209118 0.202042244761194 0.209055457368497 0.205227695420337 0.210795899654950 0.204781163111493 0.203982469292837 5 5 - 4326957 4327568 4327250.273 4326531 4331702 - gene protein_coding_gene TRUE TRUE AT5G13480.1 FY (FY) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G67320.1); similar to FY protein [Lolium perenne] (GB:AAT72461.1); similar to Os01g0951000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045410.1); similar to putative OsFY [Oryza sativa (japonica cultivar-group)] (GB:ABA12455.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.485977581028996 5.24497421753488 0.000312274984368359 0.00561100965186984 8.55998361952583 10.5938031960457 0.485977581028996 0.0778320172942696 AT5G14590_at 8.42892611720312 8.39971250425984 9.23142260664018 9.1676894048145 9.02442805800545 8.6294825897038 8.74004651439227 8.52347984041998 7.79262656580119 8.05900152965003 8.35209795590056 8.39198553439118 8.2813958315144 8.37457921010725 8.49050937724723 8.47724958120158 8.42410188055961 8.40898415850816 7.89534425975856 0.169013966858954 0.171491135151380 0.167213462093940 0.171220564763039 0.170061945543871 0.184199198698916 0.169186204671034 0.174439882049179 0.194178661107251 0.179225811774889 0.169973388355921 0.168857150520857 0.168431143682188 0.173339573443417 0.171352855395632 0.167213462093940 0.176030639521823 0.180155770019490 0.178236488615385 5 5|0 -|/ 4703566 4704631 4704278.5 4703301 4706741 - gene protein_coding_gene TRUE TRUE AT5G14590.1 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative similar to ICDH (ICDH), isocitrate dehydrogenase (NADP+) [Arabidopsis thaliana] (TAIR:AT1G54340.1); similar to isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G65930.1); similar to NADP-specific isocitrate dehydrogenase [Lupinus albus] (GB:BAC77065.1); similar to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] (GB:CAA65504.1); similar to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] (GB:CAA65503.1); contains InterPro domain Isocitrate dehydrogenase NADP-dependent, eukaryotic; (InterPro:IPR004790); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804) 0.487334955082165 5.24058483170908 0.000314337608042144 0.00564573150767443 8.5534103680353 16.9260336508876 0.487334955082165 0.078886813020916 AT5G45000_at 5.34091415848673 5.84058470986413 6.36358708440763 6.0517344920877 3.59388336353693 3.01243996049803 1.56714436614415 1.66311676314921 2.84847510448075 1.93995323258033 2.19262892738370 2.27191431327915 1.86580556275717 2.41645297051780 1.81656151696119 2.04074077794950 2.42267861482169 2.89319021193614 1.65084167244596 0.296582396976809 0.298415978858944 0.300453505165982 0.314517728306851 0.281538747144465 0.277435737522386 0.279131051567335 0.278463234574627 0.279338355108191 0.276632775760056 0.274351204298297 0.274255987138372 0.278548516758825 0.274255987138372 0.279866008233729 0.276151617581372 0.279917843478931 0.274255987138372 0.275776392240905 5 5 + 18183472 18183938 18183674 18182610 18184420 + gene protein_coding_gene TRUE TRUE AT5G45000.1 transmembrane receptor similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51270.2); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) 0.623022250584982 5.23667752813003 0.000316185885528489 0.00567657638939942 8.54755658656151 6.37238558649838 0.623022250584982 0.144187857232168 AT5G35530_at 10.4948388647108 10.4931469393913 10.7559288245541 10.7760516603146 10.8443389640606 10.8325180238577 10.4028132895131 10.6484831339688 10.1777746946758 10.2193157936279 10.810643231711 10.8655861586479 10.7435985712584 10.6379752875138 11.2154190274755 10.6618132984085 10.7278995005891 10.6395963176612 10.2193899012507 0.0672129350907583 0.064354970247509 0.0659483299607024 0.0666642016285553 0.0654168454190803 0.0653477417501086 0.065046987772947 0.0678653680541166 0.0743668747580827 0.0699883180115006 0.064354970247509 0.067409454513866 0.0655200064092033 0.0651864401053879 0.0668810002361729 0.0652112837049567 0.0644072028373896 0.068681872231189 0.0685364067911382 5 5|0 -|/ 13727600 13729159 13727989.3 13727366 13729518 - gene protein_coding_gene TRUE TRUE AT5G35530.1 40S ribosomal protein S3 (RPS3C) Identical to 40S ribosomal protein S3-3 (RPS3C) [Arabidopsis Thaliana] (GB:Q9FJA6); similar to 40S ribosomal protein S3 (RPS3A) [Arabidopsis thaliana] (TAIR:AT2G31610.1); similar to ribosomal protein S3 [Medicago truncatula] (GB:ABE87988.1); contains InterPro domain Ribosomal protein S3, C-terminal; (InterPro:IPR001351); contains InterPro domain KH, type 2; (InterPro:IPR004044); contains InterPro domain Eukaryotic/archaeal ribosomal protein S3; (InterPro:IPR005703); contains InterPro domain KH, prokaryotic type; (InterPro:IPR009019) 0.437355886137077 5.23320093678448 0.000317840139312922 0.00570391381559549 8.54234613172808 21.1526699062179 0.437355886137077 0.0427067208945688 AT5G47680_at 6.55796665800565 6.93742624652234 7.07521310904539 7.02659206321097 7.44386640498018 7.60286338036913 5.95510517857478 6.83746051691652 6.41942787014553 6.40256388745392 7.52810709976411 7.31586181053819 7.0585434219968 7.28057259101924 7.67835931126864 7.32709100523068 6.4279491979896 7.21828715843304 6.92095868092841 0.185891435477567 0.177438941769862 0.177809895173368 0.183772245064828 0.18644366634869 0.196318298751977 0.188297330130931 0.181085480089754 0.204012099048100 0.179854850378741 0.192255649460368 0.177893536092537 0.179640665431525 0.192585365223388 0.189929677322282 0.172795065930581 0.181160860385815 0.176694374538961 0.183761511303373 5 5|0 -|/ 19333567 19334213 19333916.7 19333360 19334748 - gene protein_coding_gene TRUE TRUE AT5G47680.1 RNA binding / tRNA methyltransferase similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to Protein of unknown function DUF425 [Medicago truncatula] (GB:ABD28597.1); contains InterPro domain tRNA (guanine-N1-)-methyltransferase; (InterPro:IPR002649); contains InterPro domain Protein of unknown function DUF425; (InterPro:IPR007356) 0.681753529708672 5.22074648128791 0.000323842239665381 0.00580922217323523 8.52366525315799 13.8347266592228 0.681753529708672 0.168689206001549 AT5G48590_at 9.48367597496486 9.66844727377548 9.99155947626146 9.91740825906384 10.0772180741851 10.0006031422104 9.71040030823332 9.7554911859338 9.16544763732864 9.34324412885396 9.68805370124751 9.85191034060905 9.8247708834725 9.70046860160497 9.57105943765125 9.84997183051747 9.73900814360979 9.64289553338135 9.13586808726828 0.105506833822474 0.105506833822474 0.112839103432507 0.110717329570207 0.107301348954060 0.112504819221754 0.108136091253829 0.115445655358643 0.121756752543347 0.113264476755942 0.108958791487353 0.107450619949679 0.112843134100322 0.117419864373675 0.110001591351791 0.107759122558407 0.114904673115798 0.108257982151588 0.112261158024589 5 5 + 19716411 19716932 19716683.273 19715633 19717173 + gene protein_coding_gene TRUE TRUE AT5G48590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07310.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93505.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93506.2); contains InterPro domain Protein of unknown function DUF760; (InterPro:IPR008479) 0.430428788365729 5.20700143412145 0.000330606455832075 0.00592810893640363 8.50302122931596 19.2997857585762 0.430428788365729 0.0377330092726391 AT5G27230_at 0.648706548588284 0.772333810263549 1.19916624861182 1.15461606278375 1.19023550307186 1.50756545898382 0.786685941898393 0.898504911298505 0.707655378510983 1.28562756360943 1.47147493760330 1.25760211121106 1.43913688207923 1.34267313064617 1.03589405490670 1.74494327927577 1.66268394899443 1.40606487583656 0.973046301095 0.203588539387894 0.203588539387894 0.204599765013275 0.209751929142756 0.210254814006491 0.209616069875774 0.220120877224094 0.206818046503598 0.217884860417217 0.212338627649485 0.206501747517515 0.204636643052822 0.219838291199776 0.20740933271311 0.211430486968010 0.205774292350585 0.210976861340636 0.213399074982460 0.213656041743399 5 0|5 /|+ 9587440 9587785 9587591.9 9584095 9588052 + gene protein_coding_gene TRUE TRUE AT5G27230.1 similar to FRL2 (FRIGIDA LIKE 2) [Arabidopsis thaliana] (TAIR:AT1G31814.1); similar to ABI3-interacting protein 2; CnAIP2 [Chamaecyparis nootkatensis] (GB:AAP31312.1); contains InterPro domain Frigida-like; (InterPro:IPR012474) 0.458810376757322 5.204312011564 0.000331947457237143 0.005949693866437 8.49897856574121 2.22414459417464 0.458810376757322 0.0625084852535755 AT5G14910_at 10.737581442956 10.6289658491269 10.7138076534951 10.6211449088095 11.1189246373427 10.9149326052169 10.5596471032193 10.3408322362928 10.4673382548477 10.6078730828527 11.2334304071985 11.3348340760227 10.9138988257626 11.0310991203703 11.6201757834813 11.2482120593789 10.9010763765199 10.9990589503345 10.5209640385108 0.0896279507624117 0.0878833282592738 0.0906062198601792 0.0907306907062991 0.0899391571701015 0.0887749660178472 0.0878849877821368 0.0908254864966651 0.0945513256996264 0.092059566779851 0.0882358027952785 0.0890409935710633 0.0903580006183655 0.0908313594113424 0.0900351460942145 0.0875465291373573 0.0929083728071872 0.0894325685453286 0.093325525707629 5 5|0 +|/ 4823839 4825101 4824220 4823717 4825376 + gene protein_coding_gene TRUE TRUE AT5G14910.1 heavy-metal-associated domain-containing protein similar to Os05g0337400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055238.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV32180.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.451805267231926 5.2034959083418 0.000332355525636393 0.00595454634819507 8.497751605563 21.5506203838677 0.451805267231926 0.0573634907277975 AT5G23760_at 7.32371545595712 6.98778063521538 8.1228469052528 7.9056606715258 7.89110992836414 7.47584125718096 7.60141732523548 7.46575643250499 7.20408253212057 7.55260224943699 8.14085792121463 8.09039319985568 7.92186561774335 8.1042873086442 7.16854738390634 8.20311868964795 8.0637322271597 7.66693442237832 7.35249760990579 0.141203588194328 0.142340610858266 0.145015008401006 0.144716163603686 0.142679301683664 0.14380345286822 0.148183583154385 0.145527453984484 0.157744371716131 0.14327222084491 0.141203588194328 0.145104503595690 0.145453699281361 0.146313362556686 0.150947770511082 0.141698817329588 0.151655325487886 0.165257011425975 0.145909559183579 5 5|0 -|/ 8013332 8014020 8013586.667 8013088 8014231 - gene protein_coding_gene TRUE TRUE AT5G23760.1 heavy-metal-associated domain-containing protein similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT1G01490.2); similar to heavy-metal-associated domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93600.1); similar to heavy-metal-associated domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66176.1); similar to Os10g0506100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065011.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.527218430425167 5.20306855829379 0.000332569422141671 0.0059559174367481 8.49710907117685 15.2416133564745 0.527218430425167 0.102508271088859 AT5G52420_at 7.04126128637195 7.99679578446009 8.35027522322284 8.51556555828177 8.97007237472983 8.28820303377135 8.79064211344481 8.86553756688537 6.49539302358182 7.28810934861694 7.71845795467223 8.2733483498218 8.66702666720964 8.27810818058729 8.38354387271754 8.84088987944904 8.39725279277876 8.13029505106552 7.64262266147729 0.180017265779411 0.180175766996651 0.174998084324084 0.177066395663811 0.175146004449957 0.171584032933826 0.180375361542056 0.176427705915514 0.218527166817224 0.19526741137007 0.178132372129926 0.173985381071260 0.181544717447184 0.184698323350332 0.179300309595136 0.175667469666906 0.185592474243013 0.193225417216798 0.184139754634263 5 5 + 21299185 21299710 21299437.091 21298999 21300032 + gene protein_coding_gene TRUE TRUE AT5G52420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23920.1); similar to Os10g0548100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065301.1); similar to unknown [Xerophyta humilis] (GB:AAT45003.1) 0.775771762678301 5.19858731945112 0.000334821196583295 0.00599376826176304 8.49036971794459 16.0913726283609 0.775771762678301 0.205558216664702 AT5G66920_at 1.85384660251026 2.08016277311290 1.56147211691567 1.73106802268185 1.65979147104470 1.89103951864003 1.84717171382922 2.36348620077722 2.9427794310239 2.46797180617304 4.45210650237001 4.73121645287549 3.65089798895028 4.12152956565931 5.46927379238146 3.2022495163213 3.31439160404039 4.38942270499291 2.86935736204949 0.200426046133983 0.193532246312982 0.195091410886967 0.19469847263641 0.195596651361705 0.198731279923782 0.194110467714338 0.195513278164928 0.195620832427885 0.194807500730268 0.205449633966703 0.196551557498482 0.192818363546708 0.198347757415637 0.199555092791558 0.191925046490410 0.215798009800944 0.194539556710973 0.192310142767024 5 5|0 +|/ 26741817 26742540 26742026.667 26740049 26742852 + gene protein_coding_gene TRUE TRUE AT5G66920.1 SKS17 (SKU5 Similar 17); copper ion binding / oxidoreductase similar to SKS15 (SKU5 Similar 15), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G37160.1); similar to SKS4 (SKU5 Similar 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G22010.1); similar to SKS16 (SKU5 Similar 16), copper ion binding / pectinesterase [Arabidopsis thaliana] (TAIR:AT2G23630.1); similar to PS60 [Nicotiana tabacum] (GB:CAA65634.1); similar to Multicopper oxidase, type 1 [Medicago truncatula] (GB:ABE89109.1); similar to Os07g0119400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058771.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.540512887981623 5.19530608685567 0.000336480255395333 0.00602098178314944 8.48543312771774 5.33671591028783 0.540512887981623 0.109454590407108 AT5G19950_at 2.75659054408888 3.16455017171069 4.06899318084574 3.34671998917756 3.62786892079614 3.16750426260727 2.16198974240912 2.58720016260549 3.05450094839693 2.32939911573076 3.45068174630461 3.22806376989921 3.53344754756988 3.46717032070706 3.26206199989186 3.49210754442013 3.05487270937371 2.94389279429415 2.94075226674138 0.206245065847390 0.199546428588506 0.209310527662882 0.202350771632702 0.203135623474986 0.209397925702051 0.202862141635327 0.210318249636456 0.211033949350505 0.213271944334384 0.203242830414633 0.199546428588506 0.199546428588506 0.206553377072560 0.210179363140267 0.202270099860020 0.217210235195112 0.209480202664230 0.206678931378593 5 5|0 -|/ 6741281 6742018 6741668.4 6740779 6743775 - gene protein_coding_gene TRUE TRUE AT5G19950.1|AT5G19950.2|AT5G19950.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63540.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72080.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67825.1); contains domain FAMILY NOT NAMED (PTHR13681); contains domain gb def: Hypothetical protein At5g19950 (PTHR13681:SF2)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72080.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67825.1); contains domain FAMILY NOT NAMED (PTHR13681); contains domain gb def: Hypothetical protein At5g19950 (PTHR13681:SF2) 0.707171063460507 5.19475039966741 0.000336762086400984 0.00602353888673539 8.48459693880842 6.14963782895374 0.707171063460507 0.179914368541379 AT5G64240_at 9.2254514085621 9.2605596556748 10.3269229439130 10.3396662570956 10.6266513891605 10.2072865701215 10.3422441652023 10.1628592560979 9.51116584237719 9.7494631417834 9.96502728890848 9.74786473635275 9.89638239076279 9.82605795643483 9.4589837694188 10.1043826042198 10.2874524272623 10.0660431536626 9.4798494541828 0.104710609849125 0.103289129760445 0.101332170805731 0.107995329698724 0.102383006895179 0.104238723429257 0.101166521563466 0.108202283428759 0.110069613362428 0.104841246300542 0.101257909782622 0.103369953751258 0.106213747279430 0.105108894032009 0.102035370964635 0.102380384085961 0.105098625772980 0.105246684080564 0.109204013312955 5 5|0 +|/ 25713641 25714283 25713902.222 25712846 25714642 + gene protein_coding_gene TRUE TRUE AT5G64240.1|AT5G64240.2 latex-abundant family protein (AMC3) / caspase family protein similar to LOL3 (LSD ONE LIKE 3), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G02170.1); similar to ICE-like protease p20 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66264.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600)|similar to LOL3 (LSD ONE LIKE 3), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G02170.1); similar to hypothetical protein [Oryza sativa] (GB:AAG60197.1); similar to Os10g0565100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065417.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600) 0.483108990059188 5.18956432073989 0.000339404468841678 0.00606579742080653 8.4767907558849 19.8110470908913 0.483108990059188 0.0791979480124734 AT5G07890_at 7.3778061190487 7.64354718797235 8.08032680521798 8.01281532620465 8.93518222001314 8.36222073452418 8.14916112813126 7.87671617908391 7.5728411874048 7.77611124929542 8.22999017335482 8.19199660289299 8.30051560254237 8.16830283614595 7.8238723167808 8.73069992073268 8.25655698025962 8.26815898597079 7.77932393375944 0.192811956406401 0.190752721960243 0.186998367683068 0.18842542142368 0.188463649949463 0.189108063988221 0.184138337482414 0.190032827718246 0.220497039025079 0.200440065004574 0.184723189393171 0.182882283821530 0.187432822590596 0.187509284163421 0.189851534511573 0.181879471086041 0.188126657317749 0.192410215450277 0.195022147328504 5 5|0 -|/ 2517727 2518524 2518105.7 2517382 2520039 - gene protein_coding_gene TRUE TRUE AT5G07890.1|AT5G07890.2|AT5G07890.3 myosin heavy chain-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61200.1); similar to Os07g0598700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060184.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83219.1); contains InterPro domain Spectrin repeat; (InterPro:IPR002017) 0.561332419223024 5.18881954086545 0.000339785750868460 0.00607010954294093 8.47566936454873 16.0325655296020 0.561332419223024 0.119606594072324 AT5G57990_at 7.5211638815933 7.5608854464901 8.18536876668376 8.37965798875437 8.40484106380607 7.9608992098496 8.07022051665704 7.9143193923396 6.88347868817949 8.0674719206858 8.25394548355488 8.70859761306575 8.11682282585086 7.9562513241508 8.14339808058356 8.34561699478047 7.95976789013397 8.07358223429855 8.04331811241083 0.150956792292131 0.145131954612969 0.147135305036799 0.148465620879274 0.148575135044445 0.152917440954221 0.143525581651278 0.146229550610187 0.168828035407526 0.145547005758342 0.149522368685031 0.148724948831055 0.144418462520807 0.153979164569960 0.147039073211137 0.142640371159451 0.155722179945585 0.151735185910742 0.151579847684057 5 5 - 23487527 23488286 23488035.273 23487240 23491330 - gene protein_coding_gene TRUE TRUE AT5G57990.1 UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana] (TAIR:AT4G31670.1); similar to Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Medicago truncatula] (GB:ABE85427.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.498018006690211 5.1790670861725 0.000344820639213191 0.00615590813539128 8.4609776485815 15.9294215563856 0.498018006690211 0.0883622662924653 AT5G52030_at 7.71487802191229 7.91014880275324 8.3352683316336 8.43239773497743 8.35848183408665 8.18821896834235 8.38429410112092 8.35131026331579 7.91530101633312 8.1739353349958 8.44837411681063 8.62411498697625 8.55263936136765 8.79804185949765 8.28073455723807 8.93752516378098 8.6103125971339 8.6478159166654 7.83145945662606 0.110064401217429 0.104730739534462 0.105823559668347 0.108435373795731 0.104730739534462 0.107170085261280 0.109895616182087 0.112027997549056 0.108007110094474 0.108316067297811 0.107014103285983 0.104730739534462 0.105363100617456 0.112754495500899 0.105246860141232 0.104730739534462 0.111406196701159 0.105924989373137 0.107666311356158 5 0|5 /|+ 21146430 21147054 21146686.25 21145355 21147316 + gene protein_coding_gene TRUE TRUE AT5G52030.1|AT5G52030.2 TraB protein-related similar to TraB family protein [Arabidopsis thaliana] (TAIR:AT1G05270.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09227.1); similar to Os08g0545700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062417.1); contains InterPro domain TraB determinant; (InterPro:IPR002816) 0.438656735299968 5.1789675177954 0.000344872450275118 0.00615590813539128 8.4608275781703 16.5023798018939 0.438656735299968 0.0482205496882169 AT5G65890_at 6.6481627914277 6.53355504133759 7.20534827116337 6.87399608957879 7.20400380030641 7.13393932286058 7.4554082340594 7.5543253089356 6.83046186199707 7.03278064651632 8.10915144597189 8.54171248126083 8.13737722325873 7.89873774155944 8.2790782681462 8.37324811580148 7.94250102915548 7.20853668024783 7.73857946839464 0.222037512602139 0.219601836764852 0.217248470437864 0.217116197272220 0.203291064893128 0.214737383037756 0.203291064893128 0.208813719318104 0.212381352495266 0.21765065248047 0.204519566017702 0.209166223101375 0.212495523799017 0.211064752033333 0.209690457613503 0.209296212936683 0.207967623201271 0.207368217078946 0.207854243631655 5 5 + 26374391 26374917 26374639.273 26372079 26375092 + gene protein_coding_gene TRUE TRUE AT5G65890.1|AT5G65890.2 ACR1 (ACT DOMAIN REPEAT 1) Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques. similar to ACR3 (ACT Domain Repeat 3) [Arabidopsis thaliana] (TAIR:AT1G76990.4); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912)|similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G25320.1); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) 0.45857228728822 5.17472316566101 0.000347088737627022 0.00619291887075905 8.45442905403793 14.7070424568643 0.45857228728822 0.064199040836452 AT5G48730_at 5.36406056577261 5.82266960249072 5.76162200826294 5.91789561970744 5.63442298280563 5.61686484459488 5.64139723053116 5.64191354828289 4.87208125942598 5.51595952627927 5.935126135609 6.33040178191099 5.79847854094161 6.29855807259276 6.28172807871356 6.13304702284879 6.15300991042288 5.49362400576563 5.17859904192503 0.204888534399694 0.194213909929941 0.214115158586487 0.196138950606537 0.203143208189049 0.210579629989521 0.19778865327488 0.19470960184436 0.207458977533125 0.200808076043089 0.194213909929941 0.196392503916914 0.202482743007551 0.199191529032053 0.204866139617683 0.198728914456086 0.208912464135587 0.202462564964082 0.199285513404825 5 5 + 19781799 19782308 19782030.909 19780378 19782498 + gene protein_coding_gene TRUE TRUE AT5G48730.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G53170.1); similar to Os03g0115300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048751.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17033.1); similar to Os06g0172000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056939.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.489653939065302 5.17402384523334 0.000347455354053114 0.00619691004299805 8.45337453985756 11.2960441183781 0.489653939065302 0.0839006856075633 AT5G66130_at 3.32212289937959 3.61848169812976 3.94083596571535 4.37722713244772 4.01573178493226 3.85113571369254 3.57801157205209 3.8222636827972 2.47602693195615 3.6609528571819 3.29127515575265 3.33933519147037 3.88034513003156 4.00169101052923 3.57819393784192 3.81944330435132 3.82189681903438 3.80223849750393 3.15338589765551 0.192609870084669 0.193171344586803 0.192680849381324 0.198737469936033 0.186375908886856 0.193614231118418 0.185835113595462 0.193737540224323 0.200375328214937 0.189287994509648 0.187761254090244 0.190531879852353 0.185835113595462 0.19248572519875 0.191503253193082 0.188225634900815 0.187147832863702 0.198345864964584 0.195118001856178 5 5 + 26453389 26454229 26453791 26451290 26454448 + gene protein_coding_gene TRUE TRUE AT5G66130.1 ATRAD17 (RADIATION SENSITIVE) Encodes a homolog to yeast RAD17. Mutant has increased sensitivity to MMS and increased telomere lengths. Identical to Cell cycle checkpoint protein RAD17 (AtRAD17) (Radiation sensitive 17) (RAD17) [Arabidopsis Thaliana] (GB:Q9MBA3); similar to nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G77620.1); similar to hypothetical protein MtrDRAFT_AC148217g17v1 [Medicago truncatula] (GB:ABE88164.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain Checkpoint protein Rad24; (InterPro:IPR004582) 0.528013252328603 5.17075039130948 0.000349176930974878 0.00622505388764938 8.44843747264664 7.21002177768278 0.528013252328603 0.104553771615940 AT5G56300_at 1.92563799313957 2.30308765916377 2.00196683184310 1.76575457749447 1.67818601260173 1.74724513793174 1.26213673166709 1.48436004776452 1.57815767696537 1.57997703095476 1.93450958581186 3.71749562562084 2.46002878187656 1.83818842455471 2.43179597351324 2.99052354403237 1.63269677488301 2.20733250650545 1.24369032698688 0.204426183162271 0.210915061599368 0.206864323987424 0.212497215113203 0.202659945769756 0.205659082009104 0.204949453952950 0.211188849536723 0.203491632507644 0.202659945769756 0.202659945769756 0.230671881431645 0.204394478937772 0.204579556219133 0.204991202901781 0.212510617413412 0.205128778373669 0.206923769499301 0.209294203280618 5 5 + 22817921 22818673 22818370.545 22816733 22818918 + gene protein_coding_gene TRUE TRUE AT5G56300.1 GAMT2; S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase similar to GAMT1, S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G26420.1); similar to H1005F08.17 [Oryza sativa (indica cultivar-group)] (GB:CAH65988.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.494389461249053 5.16765366623307 0.000350813907505474 0.00625166697889011 8.44376545736428 3.70547008081846 0.494389461249053 0.0869445721376389 AT5G01770_at 4.0818915295839 3.83398978018383 4.9263647355164 4.75591443975364 4.49863045459693 4.79054564206616 4.51302180893653 4.12311374915708 4.25398166951821 4.78557858675645 4.85289472975997 5.31195994078237 4.88737615966466 4.92613207057692 4.68276022220006 5.63559957505401 4.9265690703636 5.3647430326479 4.89580836534092 0.206991280802449 0.201493598010705 0.211355177346498 0.211549963369882 0.201372391759106 0.204595118851600 0.204545618566924 0.204148842424179 0.222375554974814 0.207188589903710 0.21128316784024 0.205005600611987 0.202768595494748 0.212258833675512 0.201132910145851 0.201132910145851 0.215633809921741 0.201132910145851 0.207990240352341 5 5|0 -|/ 294602 295411 294991.9 294536 301770 - gene protein_coding_gene TRUE TRUE AT5G01770.1 RAPTOR1A (RAPTOR2); nucleotide binding Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development. similar to RAPTOR1B (RAPTOR1), nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT3G08850.1); similar to transducin family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21850.1); similar to transducin/WD-40 repeat protein [Oryza sativa (japonica cultivar-group)] (GB:AAR82959.1); similar to WD40-like [Medicago truncatula] (GB:ABE88896.1); contains InterPro domain Regulatory associated protein of TOR; (InterPro:IPR004083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.516620538638637 5.1647456947315 0.000352358531372749 0.00627661311109663 8.43937689257939 9.29974762947583 0.516620538638637 0.099073054814024 AT5G04890_at 4.15981188946671 3.98802224245935 4.29517792143457 4.18829944984476 3.74120351522693 4.3499943074632 4.03651660996626 4.1464118155407 4.47374711894331 4.55181146775913 5.36806123439061 6.165187348799 5.49598141947254 5.18426211156604 5.71302077241171 5.56819594399071 5.26627201519717 5.30929900917497 4.42508856563204 0.237497260236887 0.236743250063988 0.232665923467219 0.234399772155810 0.237905596359091 0.234574740041017 0.236336083027589 0.232606524801672 0.250285537159744 0.232606524801672 0.236609543338343 0.255182225674057 0.238469748184142 0.243506209631743 0.241564030908378 0.246360047241565 0.235932435772578 0.232606524801672 0.232606524801672 5 5 + 1427848 1428302 1428140.091 1427174 1428455 + gene protein_coding_gene TRUE TRUE AT5G04890.1 RTM2 (RESTRICTED TEV MOVEMENT 2) Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT3G10680.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT44298.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.543107045115646 5.15697995141444 0.000356518974951212 0.00634811558983965 8.42765095259872 9.10934673525206 0.543107045115646 0.112636902435070 AT5G57710_at 9.80214266962511 9.94545563422392 10.4165493139787 10.2924542794033 10.7257347454197 10.2829053666731 9.8854856861537 9.91247540676434 10.2070259223244 10.5316019924203 11.2061243327711 11.0717904858237 10.9424598221945 10.7046385622679 10.5064892074431 10.9321700007256 10.5528910716183 10.5322221286611 10.3865098975141 0.109675640019719 0.108219133941306 0.102954135611323 0.102954135611323 0.105116774561410 0.106459460559211 0.103958104811002 0.107464795254693 0.116133943134555 0.105619587017419 0.107321534634914 0.104888766149887 0.105940714696443 0.114740376951994 0.107430991983762 0.102954135611323 0.109358630621876 0.113174247398383 0.106276190931124 5 5 + 23404766 23405251 23405044.364 23402020 23405579 + gene protein_coding_gene TRUE TRUE AT5G57710.1 heat shock protein-related similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G30350.1); similar to Os08g0250900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061376.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86426.1); similar to 101 kDa heat shock protein; HSP101-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05509.1); contains InterPro domain Clp, N terminal; (InterPro:IPR004176) 0.487036670597774 5.15382572436386 0.000358223706998884 0.00637585133623286 8.42288560038429 20.7484724572091 0.487036670597774 0.0834913855644576 AT5G06160_at 4.7618682266022 5.26188974780267 5.57496016326088 6.04251944061207 6.49842390296847 5.5891720111514 5.13528993094428 5.05011981721516 4.73520986004485 4.29340833366122 4.99718699476847 5.87194347963193 4.83324083113591 4.78901155724511 5.19756927123975 5.42220615825335 4.83858488280557 4.73965650948829 4.36671871618945 0.218626400782357 0.216298260969047 0.225157098519373 0.225743725861109 0.238486861829831 0.221482421958195 0.230867838166163 0.222403870046867 0.226511318315715 0.222135702273492 0.216298260969047 0.223080867821376 0.218616127682068 0.221867872544131 0.226491877141477 0.216298260969047 0.226847792298371 0.228816253363946 0.224157469670248 5 5|0 -|/ 1862632 1863453 1863118.7 1862370 1866434 - gene protein_coding_gene TRUE TRUE AT5G06160.1 splicing factor-related similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT4G01000.1); similar to Zinc finger, U1-type [Medicago truncatula] (GB:ABE80846.1); similar to Os03g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051082.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690); contains InterPro domain ATPase, F0 complex, subunit F6, mitochondrial; (InterPro:IPR008387) 0.747519803064834 5.15313501389621 0.000358598162597587 0.00637989708582475 8.42184188608842 10.2649240370044 0.747519803064834 0.197511871553036 AT5G11480_at 9.41110595772349 9.50127703816306 9.68497577432317 9.47605835337665 10.0370941431537 9.83822920598335 9.75949672049478 9.36356200415776 8.96813543142125 9.31359495178594 9.9516562812401 10.0813026665186 9.76173778547231 9.74449825808517 10.1113446076571 10.0826769474419 9.91605791031077 9.7700271802886 9.30360289559144 0.0949069019418522 0.0933363295332865 0.0935606753052655 0.093754794682519 0.0955331139540645 0.0958822939119244 0.0959263142937702 0.0927743246284438 0.110743384891017 0.0959401885854636 0.0965282519386857 0.0914068839630776 0.095134031368385 0.097951046085917 0.098547093759581 0.0914068839630776 0.0996713267524788 0.0944403718499516 0.095467784484206 5 5|0 -|/ 3669425 3671072 3670321.1 3669194 3671575 - gene protein_coding_gene TRUE TRUE AT5G11480.1 GTP binding similar to EMB2001 (EMBRYO DEFECTIVE 2001), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22870.1); similar to Putative nucleotide binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19136.1); similar to Os01g0732200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044154.1); similar to Os03g0232500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049468.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP-binding; (InterPro:IPR005289) 0.49126527538419 5.14879836790969 0.000360958714977335 0.0064192600983057 8.41528724749857 19.1952367984518 0.49126527538419 0.0861959683812696 AT5G13870_at 2.40176007844007 1.70330393709386 2.81320262487496 2.33415742990825 3.15207025177985 3.15256547956828 1.83411955784181 2.17140284018926 2.0699403401396 2.23843595525826 2.37885224919697 2.71524378042976 2.59392562562894 2.57944417813281 2.83993433109051 3.02900206786974 2.79857066873404 2.46133736822983 2.35611082698573 0.202692657621289 0.204386362419645 0.199096515026124 0.212190916889835 0.20360985498004 0.204967881249269 0.199323234571210 0.205091138676143 0.207909067314776 0.207804792165742 0.204820380881954 0.198920697359039 0.199727697855766 0.20376431462605 0.201338736512495 0.200248038186549 0.198920697359039 0.199864125087033 0.212238846263742 5 0|5 /|- 4475092 4475683 4475456.3 4474978 4477047 - gene protein_coding_gene TRUE TRUE AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds EXGT-A4, endoxyloglucan transferase, Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) (XTH5) [Arabidopsis Thaliana] (GB:Q9XIW1); similar to EXGT-A1 (ENDO-XYLOGLUCAN TRANSFERASE), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT2G06850.1); similar to xyloglucan endotransglycosylase (GB:AAB39950.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.644197709672232 5.14057403649691 0.000365480895512978 0.00649701728865744 8.40284874853336 4.89334002052468 0.644197709672232 0.157763368482967 AT5G19940_at 12.1136948439917 12.2938015239127 12.5079449226058 12.585665327058 12.7676095239801 12.7065130949137 12.5297023350440 12.6113813545078 12.5304836241147 12.3966299616194 13.1551398699787 13.1422476986625 13.0826484511384 13.0593184026588 13.0673869110449 13.2154218791339 12.6583407488068 12.9489473730804 12.4087376623254 0.0645596416067615 0.0645596416067615 0.0683027652189326 0.0648859513237643 0.0655669169673721 0.0662734480752693 0.0658179900519781 0.0655513743704293 0.0690953486763409 0.0672841838493336 0.0658478009158953 0.0655720972815584 0.0654261334251567 0.0659172604990804 0.066570629579382 0.0645596416067615 0.0702730938494962 0.0683796642755373 0.0667219611796557 5 5|0 +|/ 6739832 6740256 6740030.667 6739626 6740959 + gene protein_coding_gene TRUE TRUE AT5G19940.1 plastid-lipid associated protein PAP-related / fibrillin-related similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to PAP fibrillin [Medicago truncatula] (GB:ABE82162.1); similar to OSIGBa0113I13.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66782.1); similar to Os04g0607000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053805.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) 0.42534293511762 5.13976897117581 0.000365926786636535 0.00650227776797391 8.4016306167614 25.2577716988348 0.42534293511762 0.0382615656120346 AT5G63960_at 2.40024901904580 1.90432558947681 3.25542869905324 2.79968516734215 2.44662896498462 2.74620595614587 2.39284341438414 2.13552103101123 1.53274849064625 2.01110906551397 2.20864333790706 3.06027880817703 2.41081594288792 2.23200541825588 2.98543024922111 2.52011231210610 2.48797472607804 2.42414745907435 2.35674131265328 0.228349052134003 0.220057930688835 0.231614563533000 0.219355338645966 0.220432962621069 0.222371021195365 0.218840805663413 0.224107397978864 0.227894855935327 0.218806688247227 0.227744355418564 0.215993952604753 0.215993952604753 0.220978182032677 0.224801510021447 0.215993952604753 0.224563016303992 0.219129996532797 0.227057716379438 5 5|0 +|/ 25622422 25623665 25623164.286 25616823 25623842 + gene protein_coding_gene TRUE TRUE AT5G63960.1 DNA-directed DNA polymerase delta catalytic subunit, putative (POLD1) Identical to DNA polymerase delta catalytic subunit (EC 2.7.7.7) (POLD1) [Arabidopsis Thaliana] (GB:Q9LVN7); similar to ATREV3 (Arabidopsis thaliana recovery protein 3), DNA binding [Arabidopsis thaliana] (TAIR:AT1G67500.1); similar to DNA polymerase delta subunit [Chlorella pyrenoidosa] (GB:BAE48221.1); similar to DNA polymerase epsilon, catalytic subunit A (ISS) [Ostreococcus tauri] (GB:CAL52459.1); similar to DNA polymerase delta catalytic subunit (GB:O48901); contains InterPro domain DNA-directed DNA polymerase B; (InterPro:IPR006172); contains InterPro domain DNA polymerase B, exonuclease; (InterPro:IPR006133); contains InterPro domain DNA polymerase (pol2); (InterPro:IPR004578); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain DNA polymerase B region; (InterPro:IPR006134) 0.589031087755457 5.12750740561392 0.000372789832723236 0.00662151583659807 8.383065739532 4.76413214083945 0.589031087755457 0.135116067669075 AT5G60280_at 2.34584690777621 2.7539564443889 3.57669282243535 3.96503999845376 2.13162179865531 2.17040870080256 1.08176489450771 0.919767029671821 1.64526882672352 1.29644489805415 1.40201100199309 1.46941589260378 1.15837046605965 0.887296574105867 1.11375129285838 1.42199526411772 1.20555794853327 1.40056354769228 1.28008224554552 0.241494140627425 0.252769597620277 0.250481956309081 0.267738939439040 0.241494140627425 0.243167119316022 0.241494140627425 0.242816022639109 0.254723881929266 0.251218930232191 0.247436597557613 0.245613678784626 0.246910456024272 0.248877024994100 0.244870983249064 0.250947779713157 0.248482726749002 0.248964436939676 0.242385276634029 5 5 + 24279296 24279727 24279559.545 24277789 24279762 + gene protein_coding_gene TRUE TRUE AT5G60280.1 lectin protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45330.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45440.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.517855968027511 5.12697703309566 0.000373089760662795 0.00662412948003272 8.38226220610406 3.70045511055473 0.517855968027511 0.101663488666995 AT5G50320_at 6.6663084506638 7.11419284091495 7.14915207795765 7.5012626761523 7.98664008798648 7.69224458198988 6.61404564422904 6.97358977286787 5.8407331788288 5.6169943005769 6.14433979242454 6.03284316697244 6.05908566874741 5.86662354156769 6.1557836661938 6.1899759102333 6.37156757857727 6.22678862524256 5.72922609786425 0.195736474671010 0.197559783598042 0.200203350019251 0.200817321247119 0.198746934355787 0.217023012257039 0.195402166692383 0.198302152725311 0.206356370486639 0.204180774871248 0.198416171203457 0.202693245351599 0.195717608433365 0.207104737825184 0.195941710046335 0.200633454252884 0.201792589825082 0.206434978494136 0.202744406825698 5 5|0 -|/ 20498562 20499690 20499381.5 20497852 20502076 - gene protein_coding_gene TRUE TRUE AT5G50320.1 ELO3 (ELONGATA 3); N-acetyltransferase/ catalytic/ hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism / iron ion binding A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Identical to Probable histone acetyltransferase ELO3 (EC 2.3.1.48) (Protein ELONGATA 3) (Elongator component 3) (Elongation protein 3) (HAG3) [Arabidopsis Thaliana] (GB:Q93ZR1;GB:Q9FK40); similar to histone acetyltransferase HAT2 [Triticum aestivum] (GB:ABG43095.1); similar to elongation protein 3 homolog [Gallus gallus] (GB:NP_001034382.1); similar to RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase (ISS) [Ostreococcus tauri] (GB:CAL57459.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; (InterPro:IPR000793); contains InterPro domain Histone acetyltransferase ELP3; (InterPro:IPR005910); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182); contains InterPro domain Elongator protein 3/MiaB/NifB; (InterPro:IPR006638) 0.571091073420446 5.12554148149237 0.000373902857637892 0.00663584846151312 8.38008708095574 13.1421097763460 0.571091073420446 0.127230254279896 AT5G44740_at 1.93896838872106 2.42518745593135 2.68593571886154 2.42940869047611 3.15412541596020 2.92220985881456 2.22270162341454 2.31820977574148 2.13710467535356 2.60432006618010 3.01062939711844 3.09753567507132 2.67054832625365 3.11175960745105 2.88774708407499 3.22781486366614 2.68567124080182 3.3559321222047 2.85104828799356 0.218738320374987 0.217892770222147 0.222163398059464 0.212894341838567 0.219492250197107 0.217952005491197 0.230867048800218 0.224293482820133 0.223544492481790 0.217803767489783 0.220529002212462 0.221643037356313 0.218617351433934 0.220424310021667 0.219167500849975 0.227167654105036 0.215914854024197 0.221860769016062 0.222571220092331 5 5 - 18065139 18065988 18065461.364 18065011 18069106 - gene protein_coding_gene TRUE TRUE AT5G44740.1|AT5G44740.2 UMUC-like DNA repair family protein similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to putative DNA polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD87579.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126)|similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to Os01g0757800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044297.1); similar to putative DNA polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD87579.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126) 0.52339177824026 5.12520094178744 0.000374096015501082 0.00663655997296878 8.37957105494728 5.28048293236811 0.52339177824026 0.104568805844538 AT5G06430_at 2.93140019228004 3.93797393893591 4.15328435051864 4.13293858061502 4.85667729472332 4.49742585538946 3.97612313900025 3.75991210296922 3.04223591505017 3.26238261382727 3.66211998277356 3.6804004681089 4.01574290214207 3.47684885216015 3.9267958767379 4.03910713640358 4.02918612836889 3.67710707634009 3.09014962873318 0.229107535572330 0.228400080788225 0.237839041615988 0.237461739399959 0.229658683626216 0.231398470896418 0.23382840748445 0.225126502571201 0.239203281335976 0.245589453795409 0.226669368790474 0.228451795221084 0.242240735755176 0.225376645963416 0.227260713573449 0.226308809603948 0.236484024403329 0.234254729333759 0.222057472428815 5 5|0 -|/ 1963627 1964133 1963959.667 1963073 1964315 - gene protein_coding_gene TRUE TRUE AT5G06430.1 thioredoxin-related similar to HCF164 (High chlorophyll fluorescence 164), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT4G37200.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94564.2); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.720276672012219 5.12383198555765 0.000374873572497766 0.00664763405379274 8.37749647418108 7.50321840117878 0.720276672012219 0.188733821503182 AT5G20720_at 11.2658468031859 11.4165314915555 11.6519088760029 11.7379721982899 11.6262312521823 11.4274044335903 11.5396522776393 11.6086521487077 11.3892748408539 11.5459772687085 12.0440187570003 12.4839515894327 11.9334765726915 12.010327599583 12.8075054313707 12.0443143392152 11.7884776294258 11.9692931156548 11.3336127199055 0.084485811116742 0.0779826600320125 0.0830770901970936 0.0796298066317038 0.0803279743326479 0.0810857871782463 0.0810870326570127 0.0805909958545722 0.0840305386476548 0.0776005174536763 0.0775166665595489 0.0775166665595489 0.078698091127894 0.081375481760977 0.0808765558713487 0.0776848813662105 0.0873910988946615 0.0811693540587125 0.0776644210984483 5 5|0 +|/ 7015527 7016314 7015977.556 7014671 7016483 + gene protein_coding_gene TRUE TRUE AT5G20720.1|AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. Identical to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20) (CPN21) [Arabidopsis Thaliana] (GB:O65282;GB:Q9TNN2); similar to CPN10 (CHAPERONIN 10) [Arabidopsis thaliana] (TAIR:AT1G14980.1); similar to cp10-like protein [Gossypium hirsutum] (GB:AAM77651.1); contains InterPro domain Chaperonin Cpn10; (InterPro:IPR001476); contains InterPro domain GroES-like; (InterPro:IPR011032) 0.432712097942508 5.12187891129955 0.000375985876817841 0.00666463272808942 8.37453620416348 23.3133377213706 0.432712097942508 0.0472048768401115 AT5G67110_at 1.29566769726802 1.31395100250805 1.97880896470039 1.89797464022833 2.06353027931516 2.20577183651491 1.83294998051765 1.45316483922155 0.735428593981109 1.78474797592319 1.82525232404692 2.07272071325949 1.54724489859383 2.01987215773111 1.76495712791903 1.37815244104988 1.89604894217491 2.01724264189395 1.82727252717445 0.232778017745505 0.224766223026955 0.233749021532198 0.240853209815454 0.22715050294836 0.229571613153333 0.224140862991133 0.221521203132548 0.240064207279950 0.223343753125399 0.223456879889122 0.227630110106140 0.232485652956743 0.224001513723777 0.229846671170845 0.224150362553529 0.230653961926925 0.229922877803030 0.223277998107868 5 5|0 -|/ 26802568 26803422 26802980.875 26802332 26803609 - gene protein_coding_gene TRUE TRUE AT5G67110.1|AT5G67110.2|AT5G67110.3 ALC (ALCATRAZ); DNA binding / transcription factor|ALC (ALCATRAZ) encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. similar to SPT (SPATULA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G36930.1); similar to basic helix-loop-helix protein [Fragaria x ananassa] (GB:AAV33474.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.464312378559135 5.11662331253653 0.000378996459160223 0.00671525216508997 8.36656744928675 3.3873954574642 0.464312378559135 0.0716324828149084 AT5G16390_at 9.12167663051431 9.52080823583414 9.1202382791848 9.23970189516787 9.76197698467012 9.62488247661839 9.60110963461458 9.62990682105568 9.81703437765224 9.57813092019203 10.8074703837253 11.0290998277502 10.4500196251439 10.5424948129604 11.0220512119045 10.4163729736423 9.91174572818872 10.7131187692768 9.51738030210468 0.107304882880692 0.101311800506377 0.115921848908418 0.104853166519510 0.105967158253757 0.105295638548655 0.103273946158808 0.106072237443423 0.108262587250571 0.102455732962740 0.101127927338814 0.101127927338814 0.101152949378044 0.108428372477445 0.102754983951963 0.101127927338814 0.106672006896345 0.101127927338814 0.103612304472878 5 5|0 -|/ 5361286 5362237 5361819.778 5360804 5363129 - gene protein_coding_gene TRUE TRUE AT5G16390.1|AT5G16390.2 BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A (BIOTIN CARBOXYL CARRIER, BIOTIN CARBOXYL CARRIER PROTEIN 1); biotin binding Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex. Identical to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (CAC1) [Arabidopsis Thaliana] (GB:Q42533;GB:O04845;GB:Q9LL78); similar to BCCP2 (biotin carboxyl carrier protein 2), biotin binding [Arabidopsis thaliana] (TAIR:AT5G15530.1); similar to acetyl-CoA carboxylase biotin-containing subunit (GB:AAC49114.1); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin-binding site; (InterPro:IPR001882); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Single hybrid motif; (InterPro:IPR011053)|Identical to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (CAC1) [Arabidopsis Thaliana] (GB:Q42533;GB:O04845;GB:Q9LL78); similar to BCCP2 (biotin carboxyl carrier protein 2), biotin binding [Arabidopsis thaliana] (TAIR:AT5G15530.1); similar to acetyl-CoA carboxylase biotin-containing subunit (GB:AAC49114.1); similar to acetyl-CoA carboxylase (GB:AAB51193.1); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Single hybrid motif; (InterPro:IPR011053) 0.471178022498317 5.11595932799923 0.000379378629268591 0.0067192777248936 8.36556039237118 19.5770685529860 0.471178022498317 0.0760656998082193 AT5G19200_at 2.93063054027045 3.39163579994576 3.80676199562819 3.77243552670715 3.84256009551875 4.09198926770774 2.35510408773549 2.76520222256731 2.29799316909915 2.10952852832633 2.40719729249762 2.11486254544012 2.45544528790403 2.59083088476207 2.30181892696784 2.34321103836082 2.51340743919171 2.18078545326132 2.47038743038776 0.208884995968647 0.201293444413849 0.210818638866271 0.225476249363892 0.204824867467125 0.211550735700184 0.201293444413849 0.208702228445632 0.221700066571461 0.204282900074267 0.212694921105947 0.207768457241772 0.201293444413849 0.220339610654891 0.206051680438891 0.207469596486005 0.213716172701621 0.204593924442005 0.201293444413849 5 5 + 6459443 6460595 6460128.091 6458955 6460858 + gene protein_coding_gene TRUE TRUE AT5G19200.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G06060.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE89395.1); similar to Os02g0701900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047846.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.544301020685576 5.11517401073754 0.000379831163272461 0.00672454572233322 8.36436922587885 5.69758055925307 0.544301020685576 0.115325002738588 AT5G11210_at 1.24484400686364 1.36133594857061 2.42915773803180 2.42750132272753 1.12492450842892 1.07029178618698 0.44772317334082 0.0211544517254493 0.262632609868197 0.635100887789706 0.454656681247604 0.55024835236984 0.0752362605994426 -0.0632737021097563 -0.182976569617691 0.388181787631709 0.364629332158921 0.662651725157571 0.0919275640408225 0.207532190719910 0.204905983075100 0.218297653010006 0.227260412155006 0.203644855185189 0.204450655478084 0.205537627478889 0.206182466155936 0.213249768517434 0.20603799184651 0.206002407396599 0.20416717042428 0.203644855185189 0.210124260899473 0.210258716636072 0.208876493462615 0.203644855185189 0.210626506168906 0.206157363124378 5 5|0 -|/ 3571387 3571951 3571636.889 3571215 3574538 - gene protein_coding_gene TRUE TRUE AT5G11210.1 ATGLR2.5 (Arabidopsis thaliana glutamate receptor 2.5) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GLR2.5) [Arabidopsis Thaliana] (GB:Q9LFN5); similar to ATGLR2.2 (Arabidopsis thaliana glutamate receptor 2.2) [Arabidopsis thaliana] (TAIR:AT2G24720.1); similar to ATGLR2.6 (Arabidopsis thaliana glutamate receptor 2.6) [Arabidopsis thaliana] (TAIR:AT5G11180.1); similar to ATGLR2.7 (Arabidopsis thaliana glutamate receptor 2.7) [Arabidopsis thaliana] (TAIR:AT2G29120.1); similar to Glutamate receptor 2.7 precursor (Ligand-gated ion channel 2.7) (GB:Q8LGN0); similar to Glutamate receptor 2.6 precursor (Ligand-gated ion channel 2.6) (GB:Q9LFN8); similar to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GB:Q9LFN5); contains InterPro domain GPCR, family 3, metabotropic glutamate receptor-like; (InterPro:IPR000337); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.472743328291069 5.11483813499632 0.000380024884482317 0.0067249196795785 8.36385974234359 1.57139474398244 0.472743328291069 0.0771052671801176 AT5G64070_at 8.49437602073784 8.53535644300832 9.30050960938742 9.09451327679646 10.2430413314451 8.6399959462525 9.32338493974566 8.98702379074417 7.03513450274892 7.8742065502151 10.1181190235682 9.63299190198374 9.47775443485547 9.54889840016916 9.58553152515966 9.91291659464097 7.67244157955291 8.73426734265307 8.63385541322627 0.374965720181208 0.330607200290573 0.330607200290573 0.348279042367123 0.330607200290573 0.403348942657382 0.332087136075621 0.330607200290573 0.391834785811653 0.383163826868367 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.483122877769124 0.377928412605574 0.330607200290573 5 0 / Inf -Inf NA 25654202 25661672 - gene protein_coding_gene TRUE FALSE AT5G64070.1 phosphatidylinositol 4-kinase (PI4K) similar to phosphatidylinositol 4-kinase, putative [Arabidopsis thaliana] (TAIR:AT5G09350.1); similar to putative phosphatidylinositol 4-kinase [Oryza sativa] (GB:AAF34418.1); similar to Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula] (GB:ABE85023.1); similar to Phosphatidylinositol 4-kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92023.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) 0.986056343668758 5.11459965306112 0.000380162496095559 0.0067249196795785 8.36349798330189 17.6688237976245 0.986056343668758 0.285776459461158 AT5G44580_at 11.1513829843734 11.5397600923086 11.6807602126840 11.9730524676003 11.8448680561926 11.4227228680985 10.7352192980328 11.0232309532369 11.6785925803458 11.2415450893692 11.7600874202561 11.8403620769059 11.6882096491330 11.9846030564488 11.6098715438577 12.1774765115011 11.7759024699628 12.0146400408082 11.1519841345567 0.107966295314785 0.101263105275772 0.104402981552752 0.102571628003351 0.102485490987741 0.115457654898859 0.107346316936559 0.105100001218459 0.104072662088413 0.10515359276058 0.101505338593706 0.101819324168039 0.101263105275772 0.101751576358864 0.101263105275772 0.101263105275772 0.110752759420974 0.101319949053084 0.108460367828894 5 5|0 +|/ 17996585 17997367 17996921.778 17996538 17997638 + gene protein_coding_gene TRUE TRUE AT5G44580.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44582.1) 0.558486365253948 5.11390990355446 0.000380560801296047 0.00672922003649664 8.36245163727226 23.0282586319991 0.558486365253948 0.122053089505298 AT5G65685_at 8.39647198979607 8.36658616146119 9.21626741314245 9.04302081654509 9.8346733469053 9.11845555097224 9.31450450393765 8.73771743695457 8.80703014638207 8.65198831113902 9.4495819219459 9.53277632793518 9.23158843110458 9.43104069074177 9.46187307110916 9.63232673182377 9.31989564618477 9.27182539437529 8.68058856867934 0.125076612763315 0.123355423645006 0.118061705365568 0.122666206541792 0.121153592303668 0.119667880719905 0.118081935020292 0.120221040131290 0.126799096730980 0.125284836619279 0.122494931545021 0.122609142832772 0.119036623217903 0.119086127088521 0.123588683715457 0.121047236046358 0.127067801149009 0.124432758842022 0.128226492271756 5 5|0 -|/ 26290488 26291411 26290885.8 26290361 26293145 - gene protein_coding_gene TRUE TRUE AT5G65685.1 soluble glycogen synthase-related similar to starch synthase-related protein [Arabidopsis thaliana] (TAIR:AT4G18240.1); similar to Putative starch synthase [Oryza sativa] (GB:AAK98690.1); contains InterPro domain Starch synthase catalytic region; (InterPro:IPR013534) 0.651222721844819 5.11349079013317 0.000380803040451138 0.0067307583933631 8.36181580960737 18.068245086949 0.651222721844819 0.162021942435235 AT5G46910_at 2.43060826097763 2.56478560836363 3.38490871469205 3.71299758891919 2.84119748414407 2.57392294492858 2.6552375022671 3.29466430588306 3.71825595767793 3.58148484413808 4.4968240617003 5.36145530009703 4.20330474955405 4.88697191097822 4.53586701042669 4.39872956592404 3.12353023491306 3.87538021358295 3.43997794352507 0.237109180807046 0.246172055994185 0.238765812441357 0.239227883036757 0.234793306394699 0.240789893506735 0.242383603352685 0.239165428012411 0.233187677219398 0.235423513005681 0.233187677219398 0.240791008857854 0.238971741698216 0.235585609675308 0.236648207171299 0.236906814997365 0.244656050608372 0.241655080019944 0.240595112801151 5 5|0 +|/ 19067337 19068046 19067571.111 19065007 19068107 + gene protein_coding_gene TRUE TRUE AT5G46910.1 transcription factor jumonji (jmj) family protein similar to REF6 (RELATIVE OF EARLY FLOWERING 6), transcription factor [Arabidopsis thaliana] (TAIR:AT3G48430.1); similar to transcription factor jumonji, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB48025.1); similar to Os10g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065492.1); similar to putative retinoblastoma binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAL58187.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Transcription factor jumonji, JmjN; (InterPro:IPR003349) 0.586142198124066 5.11037862629941 0.000382606939002296 0.00675988684344044 8.35709358696443 6.90237236594395 0.586142198124066 0.134710377446505 AT5G17620_at 4.43079983160596 4.2753515528227 3.69252787566743 4.1299071385879 4.68685645711307 4.802901582888 3.81225875708715 3.88025777676931 3.86899719414706 4.24713547287946 5.44569252236848 5.42757646050916 4.93521994255925 4.56863390429449 5.21133123303243 4.9276200608926 4.38154956100076 5.11692079457923 4.6758613049718 0.220014353966129 0.211264986659246 0.212976245014886 0.221289146608794 0.206568921328434 0.206568921328434 0.212673280340317 0.219435485079255 0.218376113176438 0.215517233430658 0.212346032050627 0.209099849772430 0.211408823691236 0.216405391586188 0.217683550968722 0.218778419785822 0.220253321765843 0.207898851383973 0.209736540565634 5 5 - 5805951 5807414 5806190.545 5805757 5808563 - gene protein_coding_gene TRUE TRUE AT5G17620.1 similar to nuclear matrix protein 1 [Lycopersicon esculentum] (GB:AAK83083.1); contains InterPro domain Plant nuclear matrix 1; (InterPro:IPR010604) 0.48310067661563 5.10961483622038 0.000383051038748265 0.00676116166171095 8.35593443177214 8.84676564685302 0.48310067661563 0.0836330641413997 AT5G17490_at 1.62730764569344 1.62633298060767 1.67146563855366 1.58121149993507 1.87689078866049 1.86054521247058 1.36675854877097 1.40388561348488 1.21512538157077 1.45781513277109 2.05600361907001 1.82468977060612 1.91385001869641 1.61555612140122 2.10949744192045 2.37501591897052 1.79778068687362 2.04401828656519 1.49891040213556 0.187444641955348 0.188487562045776 0.193946540996298 0.18712284258547 0.186773191008888 0.194371227838252 0.192866226609791 0.190373110064825 0.192414519080219 0.199033436613503 0.190041330791609 0.192866229851731 0.187950763057246 0.190863497523429 0.188405092755856 0.190740415590783 0.19471694494613 0.201856913819302 0.190821907423093 5 5 - 5764332 5764848 5764548.455 5764065 5766079 - gene protein_coding_gene TRUE TRUE AT5G17490.1 RGL3 (RGA-LIKE 3); transcription factor DELLA subfamily member involved in GA signal transduction Identical to DELLA protein RGL3 (RGA-like protein 3) (RGL3) [Arabidopsis Thaliana] (GB:Q9LF53); similar to RGL2 (RGA-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G03450.1); similar to DELLA protein [Malus x domestica] (GB:AAY56750.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.408945799309757 5.10948152541747 0.000383128607358584 0.00676116166171095 8.35573210551255 3.30563396860814 0.408945799309757 0.0171248553452092 AT5G65900_at 3.07734067216492 3.47472192579348 3.82095030594848 4.01892452359139 3.92506749869282 3.22077292634487 3.17690228862614 3.24221644815219 3.04863020716895 3.34685940554512 4.18741332011467 4.24660810843543 3.84560816470403 3.62553519047981 4.12204372995884 3.63740501289639 3.23101409481963 3.58268521293999 2.89281034312772 0.234625624435993 0.231901891035543 0.233510721088425 0.231901891035543 0.234008077598918 0.238475557922784 0.234775135022352 0.236936370905767 0.246339724248138 0.231901891035543 0.231901891035543 0.231901891035543 0.233878535252509 0.231901891035543 0.236725497586495 0.236515867610627 0.245119914320979 0.248117183436607 0.239864356527413 5 5|0 +|/ 26377421 26378339 26377882.375 26375432 26378669 + gene protein_coding_gene TRUE TRUE AT5G65900.1 DEAD/DEAH box helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 27 (EC 3.6.1.-) (RH27) [Arabidopsis Thaliana] (GB:Q9SB89;GB:O49530); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G18600.1); similar to PREDICTED: similar to CG6375-PB, isoform B [Tribolium castaneum] (GB:XP_973872.1); similar to Os03g0802700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051603.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.608661299486604 5.10945006392264 0.000383146916067802 0.00676116166171095 8.35568435590424 6.94755661845138 0.608661299486604 0.144519029979721 AT5G51080_at 1.28753480563023 1.59240767727539 2.03536490066322 2.24464784178636 2.90383948805893 2.20840868481951 1.71609729784319 1.94809587327915 1.17255999787051 1.13051533139638 2.10578087929657 1.67005944861471 1.65520803293589 1.7566664168485 1.69669050866070 1.98253593908815 1.95305867295357 1.98879942450564 1.77101896125384 0.219236874975924 0.209850222626128 0.217794440231583 0.215927237523249 0.215740067945267 0.213929064591134 0.206915760644647 0.206915760644647 0.233159169481838 0.211342606719953 0.210847304499689 0.208249026646943 0.213721769502241 0.213706409744422 0.211111575929292 0.213991830608684 0.213830972403359 0.209551241738831 0.208708464246892 5 5|0 -|/ 20786393 20787437 20787038.222 20786030 20788258 - gene protein_coding_gene TRUE TRUE AT5G51080.1|AT5G51080.2|AT5G51080.3 RNase H domain-containing protein|nuclease similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to putative RNase H domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD03047.1); contains InterPro domain Ribosomal protein L9 N-terminal-like; (InterPro:IPR009027); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337)|similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to Os08g0177800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061125.1); similar to putative RNase H domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD03047.1); contains InterPro domain Ribosomal protein L9 N-terminal-like; (InterPro:IPR009027); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.602549900257203 5.10563615246116 0.000385373282114171 0.00679768233595957 8.34989481761 3.59661524393777 0.602549900257203 0.142094019836098 AT5G48060_at 1.82040451322118 1.70458651918124 2.14866581716805 2.15973833851055 1.99226135010202 1.93437362994794 2.13659160534707 1.84776268445975 1.98530014979343 2.05824417808010 2.89631265291282 2.67026541479720 2.58116440797467 2.43000899188791 2.68339658101543 2.95595767366866 2.17764725709429 2.72540990341856 1.78166068993701 0.237893839684279 0.232928505784349 0.237239380707747 0.240599218407244 0.230692387221602 0.23249654136115 0.235196244713847 0.23487545789180 0.245444667817309 0.230250518646937 0.229881007631717 0.236168385877372 0.232729665483269 0.235282477695096 0.254239408466758 0.233517405490365 0.230584106236879 0.237322329573057 0.241255226394423 5 5 + 19495505 19496073 19495768.091 19492522 19496228 + gene protein_coding_gene TRUE TRUE AT5G48060.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12970.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to C2 [Medicago truncatula] (GB:ABD33426.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to C2 [Medicago truncatula] (GB:ABE85066.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.439854403894588 5.10264365344445 0.000387129766213269 0.00682588832826156 8.3453506541547 4.25892574038374 0.439854403894588 0.0548093222856834 AT5G52640_at 4.7575014312902 5.07989235931344 6.01612020978542 6.31392035127498 5.82314905743815 5.60315808641019 4.03483298443001 4.60931488876816 4.33501829568162 4.73175772949692 4.23137328775839 3.57799699913903 4.26310398730389 4.27448810593403 3.76585592090452 4.75887031268443 4.71165367495685 4.59761923732622 4.25169714591023 0.212450152728246 0.212511288595088 0.236349795511284 0.23519008250837 0.215388531384262 0.219480801292729 0.216218729436896 0.212450152728246 0.216766539025957 0.214662563555226 0.220187951487361 0.217426655149678 0.212450152728246 0.217056349800127 0.214776871450605 0.215641278916092 0.221549962485954 0.212450152728246 0.213040307416327 5 5 + 21371884 21372322 21372123 21369625 21372587 + gene protein_coding_gene TRUE TRUE AT5G52640.1 HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding / unfolded protein binding Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. Identical to Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) (HSP81-1) [Arabidopsis Thaliana] (GB:P27323;GB:Q03930;GB:Q96268;GB:Q9LTF3); similar to heat shock protein 81-4 (HSP81-4) [Arabidopsis thaliana] (TAIR:AT5G56000.1); similar to HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56030.1); similar to HSP81-3 (Heat shock protein 81-3), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56010.1); similar to heat shock protein 83 (GB:AAA32822.1); similar to heat shock protein HSP81-1 (GB:1908431A); similar to Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) (GB:P27323); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 0.575915321999034 5.09836715465969 0.000389654678776856 0.00686761484417522 8.33885437400367 9.63579179497907 0.575915321999034 0.130773267982421 AT5G01200_at 2.07843324034258 1.93782841205321 2.11980905539999 2.33571912784083 2.58974095011639 2.01459512438646 1.71091424697612 1.66789812529982 1.18605494321300 0.919173769902084 1.88052135796261 1.91555287503296 1.53423380239038 1.75969490281527 2.10095305159936 2.03048713581359 1.31612883206911 2.00381554414201 1.41708880599918 0.233568107753116 0.230498913109771 0.230707280907323 0.227535946357234 0.241234529322007 0.232359398688176 0.225394259653074 0.227124067713111 0.236156779452065 0.231580177128447 0.224884469732012 0.224884469732012 0.229736846738703 0.224884469732012 0.227460114363883 0.227284002653758 0.227070815123930 0.225569766006982 0.224884469732012 5 5|0 +|/ 77350 78247 77874.1 77115 78542 + gene protein_coding_gene TRUE TRUE AT5G01200.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G38090.1); similar to MYB transcription factor [Hevea brasiliensis] (GB:AAU06309.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.529882578145694 5.09581691293856 0.000391168699391209 0.00689149784573096 8.33497908058293 3.55275692401838 0.529882578145694 0.109316589451221 AT5G54260_at 2.78661268872892 2.94274274278841 3.21897433294768 3.05423516717734 3.56482413262527 3.51806369306281 2.97601686821319 3.00655574271337 2.99861949577684 3.52030475207085 3.73061015999590 3.93317708802429 3.56457111050765 3.82523927547003 3.59776928199197 3.72480559456049 3.60447987104487 3.60181291528205 3.27215585345939 0.229956216087434 0.224346926420250 0.223875164295459 0.218191355840656 0.222569163847836 0.218882530255156 0.217442898437573 0.217442898437573 0.219634955007574 0.217442898437573 0.223917304806379 0.218708405602957 0.217442898437573 0.218245402213333 0.224387164326421 0.218591056445763 0.217442898437573 0.226017844767069 0.223603303503601 5 5|0 +|/ 22054019 22054364 22054136 22049295 22055217 + gene protein_coding_gene TRUE TRUE AT5G54260.1 MRE11 (MEIOTIC RECOMBINATION 11); protein serine/threonine phosphatase DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1 Identical to Double-strand break repair protein MRE11 (MRE11) [Arabidopsis Thaliana] (GB:Q9XGM2); similar to meiotic recombination 11 [Triticum monococcum] (GB:CAJ15648.1); similar to DNA repair exonuclease [Medicago truncatula] (GB:ABE84247.1); similar to putative MRE11 [Oryza sativa] (GB:AAX24126.1); contains InterPro domain DNA repair exonuclease; (InterPro:IPR003701); contains InterPro domain Mre11, DNA-binding; (InterPro:IPR007281); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.422578557924799 5.08225990015474 0.000399322726246668 0.00703229565475403 8.31436170719064 6.61425393563813 0.422578557924799 0.0404499305648123 AT5G50890_at 2.68044666083599 2.64569479332210 3.33131492156811 2.72692661708053 2.93415379169062 3.058962835573 3.12514664224707 3.1369294911689 2.96545004750187 2.88248527540293 3.76083718893602 3.74845982274744 3.48060303493713 3.31707301165944 4.07232461558669 3.91443985623368 3.90490605069893 3.89103847220623 2.64115612821756 0.206164706936522 0.198171327247708 0.197504919408675 0.196932367188163 0.200600712272546 0.200625182128899 0.20028285254615 0.196217842364677 0.202742764677783 0.204096217017279 0.199246563436775 0.207467643024747 0.206266271961402 0.202197236041082 0.198919487877969 0.198037861376449 0.197645991914658 0.20135490670173 0.199641047168406 5 5 + 20720863 20721373 20721132.636 20719910 20721461 + gene protein_coding_gene TRUE TRUE AT5G50890.1 similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT2G05260.1); similar to Os01g0243000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042560.1); similar to Os01g0751600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044260.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84413.1) 0.523649125418061 5.08081255775443 0.000400203847894524 0.00704495122290007 8.31215897047943 6.2504006726857 0.523649125418061 0.106987684873428 AT5G11550_at 3.39613737771967 3.12194768982618 2.9878128509295 2.77442489153226 2.99536614568594 3.37015142583442 3.00201777243719 3.08792492969875 3.00009480793050 3.10117162457636 4.19421364485477 4.76466401776298 4.02135080353827 3.94855520632525 4.82226229739087 4.31672285438663 3.6303057265108 4.54349176154361 3.43485952618836 0.281332126109108 0.280491375321529 0.290997000698305 0.285205838980316 0.289056781520042 0.280975744541599 0.28372256169575 0.276484361687463 0.290516228442164 0.280531684104017 0.276311206404211 0.294208761297544 0.283988147731987 0.27908985222729 0.289133268310801 0.278607142905893 0.276311206404211 0.276311206404211 0.293834114797559 5 5 - 3708247 3708772 3708524.818 3708010 3709247 - gene protein_coding_gene TRUE TRUE AT5G11550.1 binding similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19380.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85101.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.490709511107912 5.0787370389727 0.000401470998142333 0.00706438917935231 8.30899965136225 6.82142510642676 0.490709511107912 0.0896814704498645 AT5G56020_at 5.6000753606358 5.83597300444381 6.37891492538215 6.67077684827017 7.3853959093748 5.45180956560805 4.96047270924679 5.2153494256925 4.54394814305096 5.02412316784963 6.0863860105808 6.18206704669221 6.19423712073582 6.30199378162551 5.92728737687041 6.39195312389258 5.36726635669543 5.96617015341889 4.91870460434113 0.259400495450707 0.250999007601082 0.25460865889929 0.247203731190722 0.259039536342768 0.272041239451421 0.251575260480196 0.245425232073867 0.259267420201853 0.247068816786595 0.252344879324325 0.245260261243762 0.245260261243762 0.266188552759782 0.263157594523807 0.248705200064338 0.260793395527496 0.256164796185028 0.245260261243762 5 5|0 +|/ 22701952 22703403 22702875.625 22701631 22703595 + gene protein_coding_gene TRUE TRUE AT5G56020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26550.1); similar to Os06g0300300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057449.1); similar to hypothetical protein cgd6_630 [Cryptosporidium parvum Iowa II] (GB:XP_627442.1); similar to Os06g0608600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058041.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 1.14600075169373 5.07689661128463 0.00040259818291997 0.00708134949458631 8.30619764248545 11.3778936817790 1.14600075169373 0.34370195782615 AT5G53010_at 5.71373382885537 5.37254820405855 6.6338298334085 6.03372408686968 6.7856147354937 5.76653001236655 4.3153512622691 3.72635541714153 4.73556223382237 4.43847489182624 4.45184535149461 4.38037571235088 4.76500836879812 5.11487633830354 4.13403497858696 5.70059326171889 3.91461006651056 5.24063469800091 4.49402420663822 0.301895795370077 0.299835143344985 0.303246550764650 0.29572148292568 0.302722688253586 0.302120182037716 0.297670191807882 0.302672236897189 0.323320546374821 0.291930244735061 0.302102801030381 0.300777678177544 0.29758044443535 0.29317966305481 0.291930244735061 0.293016440792511 0.327764561705757 0.300587686944766 0.295677536369217 5 5|0 -|/ 21505947 21507397 21506599.571 21505716 21513763 - gene protein_coding_gene TRUE TRUE AT5G53010.1 calcium-transporting ATPase, putative similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to ACA9 (autoinhibited Ca2+ -ATPase 9), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G21180.1); similar to ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G57110.2); similar to Os04g0605500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053795.1); similar to putative calcium-transporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD27978.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) 0.839827195914208 5.07584747647454 0.000403242236885037 0.0070898016525704 8.30460013114198 10.1778448180910 0.839827195914208 0.236140956068131 AT5G59150_at 6.6933311515122 6.83728733129548 7.33854496824204 7.5210774552429 7.59312370274056 7.41401430152316 7.08360386108605 7.3750716348794 7.67840700526498 7.10135524324035 8.06456638696501 7.77958716721655 7.8565722670847 7.92039243022445 8.03493036477234 7.77463303184975 7.49983892291461 7.9521508061367 7.4464304169903 0.138797057693569 0.132353286124134 0.133509717211708 0.130368744460285 0.128020693100564 0.132800525804478 0.133607871137075 0.129935630914747 0.146794209613834 0.131166238170216 0.128020693100564 0.128020693100564 0.128020693100564 0.139970539306014 0.137316061405718 0.132289364340131 0.134434861763515 0.131581526582562 0.132809279503067 5 5 + 23895032 23895444 23895264.7 23893820 23895655 + gene protein_coding_gene TRUE TRUE AT5G59150.1 AtRABA2d (Arabidopsis Rab GTPase homolog A2d); GTP binding similar to AtRABA2c/AtRab11A (Arabidopsis Rab GTPase homolog A2c), GTP binding [Arabidopsis thaliana] (TAIR:AT3G46830.1); similar to Ras-related protein Rab11C (GB:Q40193); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.46048482294543 5.07536125952165 0.000403541091680526 0.00709218012964318 8.30385971541182 14.8665392061372 0.46048482294543 0.0715775368052265 AT5G40890_at 10.2141657856123 10.3647131827527 11.0411609545966 11.1091459619400 11.3681652201529 10.8758103290050 10.7055502793382 10.6613252666920 10.7415653750595 10.8516625094543 11.2880576029052 10.9383468548879 11.2897043638843 11.2323030792441 10.9068399990451 10.9555313203336 11.0908929977836 11.0316202578036 10.5714205122368 0.0820388711437264 0.0798757795227462 0.086371512358835 0.0842628574712828 0.0793630297313328 0.0896312773908669 0.0795719621320198 0.0793630297313328 0.0990984775425033 0.0836040121403407 0.0793630297313328 0.0796949682144549 0.0793630297313328 0.0849015112409422 0.0808928257603992 0.0793630297313328 0.0869741022635975 0.0816514935537438 0.0845599454118321 5 5 - 16398905 16399467 16399206.091 16398542 16402547 - gene protein_coding_gene TRUE TRUE AT5G40890.1|AT5G40890.2 ATCLC-A (CHLORIDE CHANNEL A); anion channel/ voltage-gated chloride channel|ATCLC-A (CHLORIDE CHANNEL A); voltage-gated chloride channel Encodes a member of the voltage-dependent chloride channel. Mutants homozygous for the T-DNA insertion mutation have reduced nitrate uptake capacity in high nitrate environment and exhibit hypersensitivity to chlorate. Identical to Chloride channel protein CLC-a (AtCLC-a) (CLC-A) [Arabidopsis Thaliana] (GB:P92941;GB:O64990;GB:Q93YS0); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:AT5G33280.1); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to chloride channel [Glycine max] (GB:AAY43007.1); similar to Chloride channel protein CLC-a, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98017.1); similar to CLC-Nt2 protein [Nicotiana tabacum] (GB:AAD29679.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) 0.491122290863596 5.07348981816947 0.000404693574841577 0.00710405310925383 8.30100953566282 21.6991103850459 0.491122290863596 0.0901971251474014 AT5G18370_at 3.45768094839218 3.07325383219785 4.08053709663201 4.04907315732342 4.21497987380713 3.46287409526305 3.15194711713807 2.32169311511488 1.91856172665046 2.24136133080386 2.33463276629157 2.51070271217005 2.82000697253212 2.89530277916014 1.93537420678727 3.08162194852999 3.37562790859101 2.30206935017316 2.12867352838090 0.224878370151363 0.221612408825523 0.229421393513793 0.235533752918678 0.227742345100694 0.236180303590785 0.219903253086742 0.219567118097023 0.224815032687423 0.227990337102646 0.220209781875231 0.225014385036105 0.237035526300775 0.219567118097023 0.223038669110120 0.219567118097023 0.219567118097023 0.222169304573276 0.236548223476516 5 5 - 6085042 6085533 6085259.455 6085038 6088928 - gene protein_coding_gene TRUE TRUE AT5G18370.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18350.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984) 0.755720385564999 5.07346609593918 0.000404708206023184 0.00710405310925383 8.30097340365267 5.85306300072082 0.755720385564999 0.205035746801256 AT5G50860_at 7.13571658641123 7.59176900714368 7.84875476675962 7.84304772407286 8.54262593802925 8.05789745076925 7.89375025834885 7.85199955771694 7.43566773075937 7.29391442367162 7.82239673193287 8.24392924918018 7.93337942224696 7.85105716623215 7.84392348551466 7.92480873330152 7.30425659870982 7.86098858729484 6.93901049562249 0.178410738443826 0.168333966712575 0.175455612208459 0.175940507721134 0.178802353382464 0.183043686519221 0.17533724458551 0.175398932998311 0.178681447581688 0.178248685780007 0.175661852885222 0.174361773631734 0.168956634341309 0.184894851926037 0.188957988118539 0.174273930392926 0.19567139899391 0.179382065231164 0.180879526473024 5 5 - 20711039 20712100 20711543.182 20710689 20714265 - gene protein_coding_gene TRUE TRUE AT5G50860.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54610.1); similar to Os01g0367700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043043.1); similar to Protein kinase [Medicago truncatula] (GB:ABE89394.1); similar to putative CRK1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD89473.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.540000448809853 5.07318209085583 0.000404883415703476 0.00710425244011073 8.30054082079302 15.3811735178995 0.540000448809853 0.115405691721763 AT5G19880_at 1.57235583350808 1.23858965050675 2.35543395143978 2.23533576978356 1.33956568403448 1.26133778318574 0.738254275193581 0.971593108262266 0.709020109045459 0.917683094448478 0.796383435652668 0.82952709966226 1.13012861957621 1.18258968984374 1.34729573818984 0.849861214914872 1.29593494325195 1.40341693316228 0.89971377344009 0.205952880097617 0.207808972714561 0.212496759621169 0.217921292296703 0.208115374021782 0.210318730474149 0.20909088155863 0.215400224197449 0.215898474225709 0.211783629166718 0.216597708093106 0.208620362055438 0.205952880097617 0.209945960512027 0.211800260538804 0.215710379355011 0.206946446848709 0.205952880097617 0.205952880097617 5 5 - 6720704 6721172 6720913.909 6720386 6722477 - gene protein_coding_gene TRUE TRUE AT5G19880.1 peroxidase, putative Identical to Peroxidase 58 precursor (EC 1.11.1.7) (Atperox P58) (ATP42) (PER58) [Arabidopsis Thaliana] (GB:P59120); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06720.1); similar to peroxidase [Solanum lycopersicum] (GB:CAA50597.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.464986648606803 5.07184316747714 0.000405710515488578 0.00711588531685469 8.29850127406653 2.43732385778581 0.464986648606803 0.0747127418446823 AT5G59960_at 7.76989028832872 8.26891553857848 8.18092974117718 8.50198489491299 9.41435746971953 8.35634068068133 8.31875468798692 8.07935556404002 6.89683071353336 7.66447899897212 8.37303280569562 8.52464626010944 8.78672868075781 8.59620706234503 7.68966212179213 8.63579355945275 8.64547150120502 8.71403419826764 7.76468242146263 0.214490464266079 0.203095021967567 0.215771565695420 0.206878690482785 0.210676259521908 0.226348303821879 0.212413615112873 0.202796729981437 0.241322401890516 0.203781529546218 0.212178229072344 0.209971210284826 0.203302515678034 0.226853727350286 0.212988645539738 0.200731882031999 0.210834361066219 0.208197848529975 0.209338294323156 5 0|5 /|- 24159600 24160555 24159933 24159240 24162559 - gene protein_coding_gene TRUE TRUE AT5G59960.1 similar to Os01g0151600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042041.1); similar to similar to Dictyostelium discoideum (Slime mold). MkpA protein (GB:AAL92603.1) 0.778936911301514 5.07006709988676 0.000406810422838295 0.00712940881036002 8.29579542174673 16.3301633090244 0.778936911301514 0.213973822285704 AT5G51550_at 8.95567584234509 9.47871321987315 8.81228390598587 9.22189359852756 10.1497414188157 9.67553155686985 9.35277633419591 9.38373012694842 9.54765425533275 9.26706658748964 11.2649082955985 10.3890135730313 10.4946523669987 10.9005436433588 10.2521505680951 10.1503852510430 9.34220273351667 10.2462156310946 9.26388199056026 0.116759187866757 0.113003204325439 0.123044650730272 0.118671501647002 0.116085081994903 0.132060557733573 0.112472363772478 0.112833018626673 0.121644440363381 0.123269778961267 0.113895934126513 0.112241742236157 0.112208149234639 0.122515348709785 0.113926168062011 0.113814565242254 0.121604694814338 0.115275157571789 0.120306928916908 5 5 - 20957041 20957590 20957345.727 20956720 20958121 - gene protein_coding_gene TRUE TRUE AT5G51550.1 phosphate-responsive 1 family protein similar to phosphate-responsive 1 family protein [Arabidopsis thaliana] (TAIR:AT2G17230.1); similar to unknown [Sorghum bicolor] (GB:AAQ06267.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 0.596306734628498 5.06719883540866 0.000408593409015798 0.00715776269491925 8.29142459941062 19.2485648932634 0.596306734628498 0.141353071567231 AT5G14080_at 3.43243550347609 4.3585272255098 4.29052233002165 4.80371136912745 5.52412857759032 5.75015540399705 3.43468240923481 4.1764527187952 4.23333465824701 4.58395163477401 5.16167965991971 5.16189857666334 4.95241499157776 5.66888649319147 4.47069579652817 5.44989128539078 5.1070543641538 4.8899708851136 5.34972524016513 0.291312520823247 0.295765106896588 0.291256576830906 0.288438478804391 0.288438478804391 0.302151023032192 0.288774510535128 0.293214929154522 0.291622732701553 0.288493244465289 0.288438478804391 0.288438478804391 0.288438478804391 0.288438478804391 0.288438478804391 0.289128886409975 0.311091300482996 0.293103992903541 0.288438478804391 5 5 - 4543284 4543719 4543423 4543103 4545258 - gene protein_coding_gene TRUE TRUE AT5G14080.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G61990.1); similar to hypothetical protein MtrDRAFT_AC146789g10v2 [Medicago truncatula] (GB:ABE90509.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.813539642384378 5.06543331874795 0.000409695021541459 0.00717416215473785 8.28873359214622 9.38640128436707 0.813539642384378 0.227112089946809 AT5G43190_at 7.08287200248856 7.64428513445006 7.83776084088802 8.31707222200402 8.14983784965155 7.96125771415038 6.34345770851828 7.23279192502573 7.26313632243748 7.54604341500949 8.50520830109699 7.8814922173205 8.18318927802691 8.19129801318923 6.99604193636649 7.8783786016943 7.7514894771355 7.77929124235634 7.36199459827216 0.225737257517909 0.217017922795820 0.222161191327634 0.218841261875122 0.219455387003562 0.245575676787031 0.213262469633301 0.211658144237032 0.233903285491434 0.225187146103419 0.224008998215839 0.21289518893165 0.218554871078264 0.230828856047706 0.214109811640677 0.21072430673352 0.230413026662715 0.22144872764504 0.218063336122805 5 5 - 17357528 17358101 17357835.273 17357366 17358797 - gene protein_coding_gene TRUE TRUE AT5G43190.1 F-box family protein (FBX6) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G15710.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96837.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 0.748018826105706 5.06373892890918 0.00041075521846331 0.00718982343805907 8.28615055681356 15.2142619639661 0.748018826105706 0.202658901717881 AT5G04920_at 8.71528232530251 8.91808161210442 8.95959775714579 9.19268531347046 9.4009381043619 9.13415459600723 8.63746851412895 8.6846344721317 8.44803983689504 8.01819953240296 8.7650354229158 8.7514986793953 8.63143481320997 8.87921974045787 8.4510297325427 8.83700308464522 8.3337447897249 8.88830225432507 8.157761499294 0.146119531771327 0.142139219392497 0.146498628762474 0.151576264322621 0.142072941009746 0.143099812480512 0.142072941009746 0.145931554391353 0.155772297704311 0.146026007418372 0.144748348019487 0.142072941009746 0.147606061726473 0.144640972673998 0.146763130665116 0.142072941009746 0.162496428272316 0.145165503910529 0.144859710136650 5 5|0 -|/ 1439329 1440505 1439833.375 1438960 1441984 - gene protein_coding_gene TRUE TRUE AT5G04920.1 vacuolar protein sorting 36 family protein / VPS36 family protein similar to Os01g0813500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044600.1); similar to PREDICTED: similar to Vacuolar protein sorting protein 36 (ELL-associated protein of 45 kDa) [Rattus norve (GB:XP_214382.2); contains InterPro domain Vacuolar protein sorting 36; (InterPro:IPR007261) 0.458567743475444 5.06196422555004 0.000411868791114505 0.00720640598818845 8.28344462461819 17.405434763923 0.458567743475444 0.0711116606010195 AT5G43440_at 9.12256826373709 9.38327600407504 9.65091516920086 9.67608657418314 10.4825632112432 9.70631412176502 9.27937138610298 9.04162799960054 8.61829549539067 8.96379103212562 9.51108165137287 9.2857028579989 9.50561909935874 9.7018287537002 9.21289198647019 9.46253843339141 9.0439001246857 9.24172588060956 8.90072042025976 0.137824741292855 0.130238619845095 0.130545242101276 0.135076146155808 0.142550202229588 0.137826045898413 0.133935577292624 0.130227532066115 0.162653663863934 0.127766697951898 0.133512630219147 0.143958052570739 0.133165192971944 0.137524671702037 0.149082601817779 0.127109077310104 0.144437234333800 0.135499230730035 0.127109077310104 5 5 - 17472589 17473102 17472836.818 17472461 17473885 - gene protein_coding_gene TRUE TRUE AT5G43440.1|AT5G43440.2 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43450.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.607658819121115 5.04050561722006 0.000425589905623491 0.0074434784299076 8.25068880758444 18.6419720484254 0.607658819121115 0.147623509031291 AT5G40440_at 4.77518175558688 5.52053379651793 5.79732226249252 5.85071216889285 6.04948791067039 5.69096061575743 5.14466412422459 4.69942707436379 3.72847881032586 3.91299736944650 4.41577248201635 4.54357077097028 4.0475028082184 4.00057354486918 4.33604541875463 4.4810849154108 4.61042976996755 3.82358042133040 3.78613357886415 0.194815913846902 0.194815913846902 0.198400386815643 0.195857384750794 0.199399256202467 0.212658648313790 0.199602525494203 0.199378589971898 0.196000153306317 0.194815913846902 0.196854824380064 0.194815913846902 0.203184580051040 0.194815913846902 0.194815913846902 0.198917320822300 0.199004494613652 0.194815913846902 0.203826887655065 5 5|0 +|/ 16200794 16201628 16201349.7 16198910 16201855 + gene protein_coding_gene TRUE TRUE AT5G40440.1 ATMKK3 (MITOGEN-ACTIVATED KINASE KINASE 3); MAP kinase kinase encodes a mitogen-activated kinase kinase similar to ATMKK6 (ARABIDOPSIS NQK1), kinase [Arabidopsis thaliana] (TAIR:AT5G56580.1); similar to mitogen-activated protein kinase kinase [Suaeda maritima subsp. salsa] (GB:AAM19158.1); similar to double MYC-tagged mitogen activated protein kinase kinase 3 [synthetic construct] (GB:ABF55663.2); similar to Protein kinase; Nuclear transport factor 2 [Medicago truncatula] (GB:ABE87929.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.642642907671683 5.03100890391913 0.000431816393870938 0.00754933309310456 8.2361703947221 9.48679784822381 0.642642907671683 0.162816574534000 AT5G16290_at 7.37171195380097 7.20540144507995 7.11393259036141 7.05285745053458 7.815918972393 7.70612611215467 7.52152053261553 7.87993157820164 6.33218139202911 6.97077188602087 7.93735435977175 7.85071793156713 7.774160191848 7.65582389510721 7.9305609372024 7.60860463070359 7.35710904846827 7.52019580941208 6.85515810791039 0.193718420136722 0.187494339959542 0.193240802605001 0.200397570744836 0.191487084547507 0.202773889346387 0.190738092284200 0.195374878882494 0.221717139009446 0.191700495109762 0.193888326141037 0.187494339959542 0.192414985227795 0.201222606274914 0.190342322718176 0.187494339959542 0.206367643808186 0.192307485270874 0.194816637235431 5 5|0 +|/ 5336313 5337360 5336771.222 5333767 5337748 + gene protein_coding_gene TRUE TRUE AT5G16290.1|AT5G16290.2 acetolactate synthase small subunit, putative similar to acetolactate synthase small subunit, putative [Arabidopsis thaliana] (TAIR:AT2G31810.1); similar to acetolactate synthase, small subunit, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX96859.1); contains InterPro domain Acetolactate synthase, small subunit; (InterPro:IPR004789); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) 0.456256396229825 5.02589844662078 0.000435206980971626 0.00760247880944194 8.22835203239017 14.6702682356411 0.456256396229825 0.0717503727377369 AT5G52630_at 2.84211528883689 2.68475741827943 3.33762524152802 3.28567689015826 3.72160645433387 3.40421962623221 2.49453769302025 2.39441657824255 2.65638247482361 2.53102511662075 2.55584887815038 2.48687149062237 2.90099259049349 2.51954592753407 2.72477941425858 2.67755231435675 2.96710285388992 2.67943235642541 2.70667323566133 0.209845840886584 0.203270386925382 0.203852538310334 0.204211809787844 0.217311369550896 0.207018449154684 0.203352694529401 0.202466387343789 0.202654313883705 0.203589530544532 0.198586610996529 0.205902455197161 0.201827022905284 0.202179879190211 0.201913415705920 0.200561030986765 0.203545145343206 0.200598040701484 0.203615798283801 5 5 + 21368797 21369257 21369048.455 21367601 21369367 + gene protein_coding_gene TRUE TRUE AT5G52630.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT5G04780.1); similar to Os01g0651100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043729.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.445490380491392 5.02494328074297 0.000435843822671847 0.00761053728254948 8.22689031467046 5.68080740078807 0.445490380491392 0.0643378901836648 AT5G59730_at 7.54051979493718 8.3660526915489 8.30901966382523 8.53235512838972 9.29871434344713 8.66340339991327 8.62798095956455 8.71662912433172 7.98782701596009 8.23017240896215 9.40545060730362 9.47033562666256 9.41021545858273 9.25784891492203 8.35516495165953 9.70098887224087 8.95326012827234 8.95192291941617 8.33370178333064 0.203583678727222 0.186686467651224 0.200841162249218 0.191635289337820 0.189890573196177 0.195501890754255 0.195793859933193 0.186201716360625 0.209071640302885 0.205168853088938 0.183925836936766 0.185088486734905 0.189729610962736 0.192894613798102 0.199822051468471 0.187516355779840 0.195275979301437 0.202481325214569 0.203728256800131 5 5 - 24081335 24081878 24081582.727 24081103 24083396 - gene protein_coding_gene TRUE TRUE AT5G59730.1|AT5G59730.2 ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70H8 (exocyst subunit EXO70 family protein H8), protein binding [Arabidopsis thaliana] (TAIR:AT2G28650.1); similar to Exo70 exocyst complex subunit [Medicago truncatula] (GB:ABE84275.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.696162761714884 5.01968414633085 0.000439368018996674 0.00766590073538014 8.21883966870468 17.1928588070614 0.696162761714884 0.185003593221895 AT5G47430_at 3.49119707306248 3.51194011571462 3.84809803408493 3.66760727550333 3.93284660806576 4.13036515448061 3.20059591099622 3.45176024038053 3.25676042446112 3.23566621013245 3.79255076226197 3.86946679649826 4.00048652028558 3.57325042933408 3.90232173893187 3.90889724291866 3.89089749815788 3.60262422624358 3.74173171269172 0.208147445748670 0.210478908276799 0.213594174714791 0.208214019234506 0.208356987837427 0.214308201133227 0.216517668310219 0.208897270809593 0.206577341344659 0.208457309901928 0.206897516265164 0.209869721233454 0.216746304362104 0.211159476648129 0.205719068155939 0.203722076170182 0.208970457818790 0.211506791858063 0.220948652973786 5 5 - 19253131 19253607 19253413.182 19252858 19258448 - gene protein_coding_gene TRUE TRUE AT5G47430.1|AT5G47430.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17410.1); similar to hypothetical protein 31.t00039 [Brassica oleracea] (GB:ABD65123.1); similar to Zinc finger, RING-type; Zinc finger, CCHC-type [Medicago truncatula] (GB:ABE84222.1); similar to hypothetical protein 24.t00020 [Brassica oleracea] (GB:ABD64942.1); contains domain RING/U-box (SSF57850); contains domain Retrovirus zinc finger-like domains (SSF57756); contains domain RETINOBLASTOMA-BINDING PROTEIN 6 (PTHR15439); contains domain no description (G3D.4.10.60.10); contains domain no description (G3D.3.30.40.10)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17410.1); similar to hypothetical protein 31.t00039 [Brassica oleracea] (GB:ABD65123.1); similar to hypothetical protein 24.t00020 [Brassica oleracea] (GB:ABD64942.1); contains domain RING/U-box (SSF57850); contains domain Retrovirus zinc finger-like domains (SSF57756); contains domain RETINOBLASTOMA-BINDING PROTEIN 6 (PTHR15439); contains domain no description (G3D.4.10.60.10); contains domain no description (G3D.3.30.40.10) 0.443515859531208 5.01393087521257 0.000443257990177234 0.00773066031887593 8.21002786995747 7.26877531033143 0.443515859531208 0.0636088975464029 AT5G60120_at 3.38139062071206 3.39431441071245 3.37324795791865 3.26052674819865 4.02219117606911 3.92668367956791 2.99704468412929 3.47097244711901 3.23758165442803 2.86150461173435 3.73646508113737 3.91048216542393 3.63163914710208 3.91185254752659 3.62919937864062 3.81966280168011 2.83830959944351 4.35948781887074 3.23130240724734 0.285478048012702 0.264697847501736 0.264697847501736 0.278147377182105 0.264697847501736 0.279618643613832 0.268605056191019 0.274441180431164 0.314839141207366 0.268851425746375 0.274524485821922 0.280883624244557 0.264697847501736 0.264697847501736 0.291679232005456 0.275989466013621 0.294455066371895 0.266055646034415 0.274459001674306 5 5 + 24227017 24228182 24227658 24225012 24228950 + gene protein_coding_gene TRUE TRUE AT5G60120.1 TOE2 (TARGET OF EAT1 2); DNA binding / transcription factor similar to TOE1 (TARGET OF EAT1 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G28550.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE87891.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.477119804722628 5.00517282337759 0.000449249880487507 0.00783159752664514 8.19660441772336 6.89817990319407 0.477119804722628 0.0859373329047525 AT5G08510_at 3.87669234083726 3.95622142866356 4.14453090573463 4.15104293803569 4.53240698926514 4.44076691152619 3.7547350796176 3.8854638423103 3.33435614455007 3.52494359329017 3.81981490319442 3.43690862949512 3.42735106986635 4.24664304575865 3.57356853276803 3.88701393957444 3.28545174701447 3.95058942437541 3.14791117033344 0.203204520727072 0.192909869910344 0.207919135539099 0.197154889944378 0.205255164113706 0.209462108078778 0.201263247991733 0.194522254685666 0.202083560579909 0.192909869910344 0.193481120757901 0.196124510507808 0.192909869910344 0.198039415800529 0.197815944193471 0.199372370371649 0.204851742395346 0.197793571399430 0.201118214206763 5 5 + 2754133 2754689 2754349.273 2753100 2755117 + gene protein_coding_gene TRUE TRUE AT5G08510.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G44230.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAA90805.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.408294727698933 5.00470511007828 0.000449572277163193 0.00783159752664514 8.19588723242358 7.61230986994734 0.408294727698933 0.0308868377108826 AT5G12100_at 3.67050153309425 3.72156235914394 3.96407374332375 4.00034636884768 4.35534780003567 4.18305537211473 3.63170020772657 3.58121146872900 3.58647548016514 3.85990226194556 4.07971945864072 4.25504522245378 4.19855568916466 4.21384149546424 3.99782959256818 4.19334923915436 4.18732223088349 3.83786138971582 3.87965449825986 0.174270636074844 0.173357196378169 0.17292615609787 0.169972152965439 0.170241237744690 0.170834573038266 0.172787661476009 0.166958276840681 0.169845158105324 0.166958276840681 0.170787054019583 0.166958276840681 0.168620379305352 0.175745279166772 0.169399354085370 0.170754088925831 0.170034546888574 0.170894215620671 0.169753786525687 5 5 + 3913280 3913776 3913517.364 3911364 3914081 + gene protein_coding_gene TRUE TRUE AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G65560.1); similar to putative fertility restorer homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC98691.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.409779194269577 5.00462490188881 0.000449627589638028 0.00783159752664514 8.19576423898464 7.83636716656654 0.409779194269577 0.0329061997563303 AT5G07320_at 5.37854259305477 5.68601061410236 5.83999987578947 5.66156233431291 5.87790646562572 5.87280517200153 5.39684975586177 5.8657188627891 5.30984239903159 5.31424567233992 6.20423777053886 6.58464832250188 5.76938640134002 6.41498266358749 6.69065172594129 5.88817323504605 5.40312426049549 5.94292466967448 5.37181728515254 0.207021392443759 0.203921651394852 0.204341322706482 0.198931855947204 0.202829244321995 0.210292991163968 0.204358473691101 0.216504274307588 0.217296102352247 0.211389267835749 0.205534089574364 0.203361285546925 0.207958659573875 0.202864253986380 0.206369056967352 0.206773159458219 0.227966037784158 0.216288083902037 0.208062148341593 5 5|0 +|/ 2311377 2312019 2311692 2309912 2312288 + gene protein_coding_gene TRUE TRUE AT5G07320.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G61810.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); similar to Os06g0604500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058018.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Graves disease carrier protein; (InterPro:IPR002167); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.50579284222321 5.00442132264509 0.000449768012598467 0.00783159752664514 8.19545206067753 11.4195417508499 0.50579284222321 0.101829223256058 AT5G46570_at 4.62153855330509 5.11550334611662 4.30534784791851 4.86388859503896 6.02202842426463 4.81118209237474 6.02074151146012 6.1392983860467 5.09005670588845 5.11905488792652 7.4465752743995 8.14557130482025 7.10241169946232 7.31818096058595 7.6516136851414 6.45750541232578 5.77574468494254 7.07749794378207 4.59768307658280 0.208338587129641 0.207188744602232 0.211633326610745 0.208583136404206 0.205579970789947 0.226038179569007 0.207062332260319 0.208591272879639 0.212632147574090 0.203743686628610 0.209050187348856 0.209009040215151 0.202896367010763 0.218262188356193 0.207486223897283 0.20253221751458 0.223682929347523 0.201559454205426 0.201559454205426 5 5 + 18913683 18914370 18914054.818 18911629 18914633 + gene protein_coding_gene TRUE TRUE AT5G46570.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to Os10g0571300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065455.1); similar to Protein kinase domain, putative [Medicago truncatula] (GB:ABE88013.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.856315343941814 4.99858607928516 0.000453812829083863 0.0078988557704468 8.18650138798136 11.2661840166399 0.856315343941814 0.246939579522706 AT5G63080_at 5.78752526818223 6.06627629353732 6.45254651949026 7.06147639986638 7.43074393005547 5.76528703146382 5.2028147436791 4.92715975482271 5.45083089959026 4.99097216315148 6.32658619905177 6.23430032444947 5.77663057951049 6.5983939215707 5.30761135943644 6.20726443053299 5.39718199854598 6.27017206697688 4.88446802185362 0.232812929419883 0.228861796675241 0.256784771550112 0.228139044160172 0.227930494795082 0.250319579077262 0.227485624255125 0.225934204475235 0.241089638812247 0.255831535386963 0.227734511814292 0.22368289610608 0.22368289610608 0.238712696962659 0.234820258588939 0.225764017797253 0.239870007490225 0.228553946825363 0.228741894559683 5 5|0 -|/ 25317271 25318122 25317592.4 25317161 25319670 - gene protein_coding_gene TRUE TRUE AT5G63080.1 transcription factor jumonji (jmjC) domain-containing protein similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G78280.1); similar to Transcription factor jumonji, jmjC [Medicago truncatula] (GB:ABE79698.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347) 1.04379001848726 4.99678133303404 0.000455071622313943 0.00791758726456116 8.18373206231552 11.6484910617411 1.04379001848726 0.314285093190774 AT5G24810_at 8.94661046836206 8.98828141818172 9.78343364121869 9.5924741256955 9.17660931286171 8.6518688763496 8.59545291932206 8.48675529522565 8.8240498209132 8.6547079525364 9.08764961617476 9.16684226701176 9.00996806231232 9.10519418822925 8.57099492100361 9.7010467128201 9.04453824054053 9.03449242800889 8.43889373949293 0.143812638910703 0.141161846547492 0.144909088836165 0.136014112696097 0.138428731260064 0.138142174360670 0.141371791338994 0.145308485818739 0.143781476630503 0.139894519908052 0.137177926385087 0.134438829234036 0.134011447320934 0.143617949270107 0.142468634026030 0.136370928538946 0.138262177506510 0.137525963401692 0.143324926054484 5 5 - 8516911 8517470 8517120.545 8516638 8522770 - gene protein_coding_gene TRUE TRUE AT5G24810.1 ABC1 family protein similar to ATATH13 (ABC2 homolog 13) [Arabidopsis thaliana] (TAIR:AT5G64940.2); similar to Os06g0701300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058483.1); similar to hypothetical protein Swol_1468 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] (GB:YP_754144.1); contains InterPro domain Penicillin-binding protein, transpeptidase fold; (InterPro:IPR012338); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Beta-lactamase; (InterPro:IPR001466); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.498847548645154 4.99379937376039 0.000457159630875819 0.00794753714927992 8.17915527739366 17.8923397448989 0.498847548645154 0.0987124347584678 AT5G62480_at 3.10525803538396 3.13527613347812 3.22615868387023 3.53051145645982 2.81128603013335 2.47172133769393 1.35341436536491 0.972048653922366 1.28199705791610 1.22746638500341 1.42145201926527 1.13669044939526 0.898468419584897 1.11175338353996 1.26068388642791 0.963909897303028 1.35395069267869 1.32239764222967 0.605986602825841 0.339819566368334 0.347570566678036 0.324856758900145 0.323267751136054 0.310773468020203 0.322095168968749 0.310773468020203 0.315597318304026 0.310773468020203 0.312757034104292 0.314317270977229 0.318816860868209 0.311970208544706 0.310773468020203 0.314605908024478 0.31343994230831 0.319916505190499 0.31233886815222 0.324383670325433 5 5|0 -|/ 25106008 25106644 25106321.6 25105920 25106846 - gene protein_coding_gene TRUE TRUE AT5G62480.1|AT5G62480.2 ATGSTU9 (GLUTATHIONE S-TRANSFERASE TAU 9); glutathione transferase Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTU10 (Arabidopsis thaliana Glutathione S-transferase (class tau) 10), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G74590.1); similar to glutathione S-transferase GST 12 [Glycine max] (GB:AAG34802.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.506800015111647 4.99220727464141 0.000458278598501219 0.00796379677109915 8.17671114186402 3.68678266073077 0.506800015111647 0.103003973806267 AT5G62810_at 9.78782502667008 9.81219713144624 10.5066625186637 10.5163160019310 10.4540277137911 10.3424150283914 10.0098352118990 10.1173213515245 9.90129390109264 9.86871358958399 10.1838174898829 10.0221706679645 10.2098408370327 10.0652195920552 9.94282318121763 10.271913436894 10.2602256390120 10.2655448595482 9.8291223238856 0.0804540838883483 0.0807548333419025 0.0787797002849986 0.0808741514265404 0.0809230073064542 0.082224627957803 0.0820404047059495 0.0804132784361442 0.0885393648232968 0.0857098420117403 0.0816804439630662 0.080357256966225 0.081033187411167 0.0845434868334602 0.0831044655896665 0.0789821367981748 0.0833101686863741 0.082561701883616 0.083820414049253 5 0|5 /|+ 25240215 25240645 25240483 25237373 25241015 + gene protein_coding_gene TRUE TRUE AT5G62810.1 PEX14 (PEROXISOME DEFECTIVE 2) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2) similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G62800.1); similar to Os05g0101200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054378.1); similar to PEX14 -like [Oryza sativa (japonica cultivar-group)] (GB:BAD44846.1); contains InterPro domain Peroxisomal membrane anchor protein (Pex14p); (InterPro:IPR006785) 0.404689246703098 4.99098618250898 0.000459138780918086 0.0079755480920046 8.17483630764175 20.2028605319421 0.404689246703098 0.0271964921105426 AT5G46590_at 1.18638222917326 1.47644180633262 2.50274869857463 3.18219802651926 1.70584266913338 2.11409521824818 1.46661130556809 1.74599660255580 1.36839212478694 1.84031104563458 1.45097632113655 1.63322380519249 2.23140865504109 1.90667892802736 1.64868611380667 1.76628380600850 2.42360140925933 1.78622980238624 1.38487359040099 0.189763962676604 0.191597786505573 0.196649837189053 0.201574646536838 0.187427699014196 0.191270584869099 0.187864969769486 0.194217491311735 0.204615837280096 0.198323511860322 0.196613626796813 0.191452314547569 0.191001219332963 0.189252508780153 0.187427699014196 0.191956577389226 0.187427699014196 0.189166476051360 0.202957639398794 5 5 + 18923277 18924013 18923659.727 18922552 18924075 + gene protein_coding_gene TRUE TRUE AT5G46590.1 ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor similar to ANAC071 (Arabidopsis NAC domain containing protein 71), transcription factor [Arabidopsis thaliana] (TAIR:AT4G17980.1); similar to nam-like protein 11 [Petunia x hybrida] (GB:AAM34774.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.616028509355598 4.98930014591199 0.000460329302546424 0.00799302591583416 8.1722472444335 3.61607874887054 0.616028509355598 0.153864208167682 AT5G35930_at 4.00244154345672 3.81019982378540 4.01095361525732 4.31149324015027 4.51773170757594 4.78239919548911 3.24533573354749 3.93598639570583 4.01057152353522 4.11220471646299 4.39962934666545 4.61896946887919 4.56483101781147 4.76596769220658 4.73965811269484 4.60965862954837 4.86697037725157 4.27911547386322 4.13299480308877 0.227626372620161 0.234220373882972 0.236392823728456 0.234013404084799 0.234421355291019 0.243992656965436 0.24037876532391 0.247105457753891 0.241005662993901 0.233352783423106 0.234849153591222 0.233376823823342 0.231856989607011 0.238741620211301 0.234782822793649 0.232466302643077 0.244451674304077 0.242235191191138 0.230053815397644 5 5|0 -|/ 14084433 14085807 14085003.1 14084222 14091981 - gene protein_coding_gene TRUE TRUE AT5G35930.1 AMP-dependent synthetase and ligase family protein similar to acyl-activating enzyme 13 (AAE13) [Arabidopsis thaliana] (TAIR:AT3G16170.1); similar to putative 2-aminoadipic 6-semialdehyde dehydrogenase [Oryza sativa (japonica cultivar-group)] (GB:BAD67775.1); similar to Os06g0111600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056587.1); contains InterPro domain Pyrrolo-quinoline quinone; (InterPro:IPR002372); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873); contains InterPro domain Acyl carrier protein-like; (InterPro:IPR009081); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) 0.588748282998532 4.98841808386648 0.000460953436233562 0.00800065908551515 8.1708925889666 8.42249617148472 0.588748282998532 0.142108140435141 AT5G20130_at 6.14780647845963 6.49915190456014 6.80677275487884 6.82226008726806 7.759525408945 7.2187524102795 7.21660801708341 6.73568829798002 6.47766311035498 6.52645406929244 7.26402510345275 7.40653208005457 7.19501284837346 7.3301390056079 7.33666404937242 7.29187587346425 7.02804362023714 6.9071658353161 6.67365407344559 0.173524509745183 0.157108330389485 0.173112890227309 0.166275765496893 0.172624478255363 0.171399269787516 0.169384605245338 0.164019346671448 0.173579496903051 0.161519427087424 0.157108330389485 0.15956048749248 0.159293246792599 0.161188323662935 0.163880204964724 0.161422914171673 0.160070410785344 0.161586855429221 0.170338526091044 5 5|0 +|/ 6797501 6798565 6798100.5 6797442 6798901 + gene protein_coding_gene TRUE TRUE AT5G20130.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD46213.1); similar to Os09g0568100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063968.1) 0.581344604221272 4.98048636609175 0.000466606278949291 0.00809553332517728 8.15870599359641 13.7904153631064 0.581344604221272 0.139242096569046 AT5G03260_at 1.59697984838722 2.41724756734157 1.83292777202998 1.67073351159015 1.82421740664430 2.08524618309636 1.75384910534107 2.07890712805354 1.99237896978534 1.85788078026882 3.29914354851647 3.75375917655751 2.75231246865301 3.1235998971978 4.04296537438186 3.24979560720144 2.37959815524456 3.62292107479681 1.85924655459140 0.247029123830640 0.247029123830640 0.253125910484694 0.257692898198826 0.250087461339349 0.249867632237298 0.248018637552111 0.247029123830640 0.258742725465848 0.256856447781457 0.255812488683280 0.258257276184673 0.255775251141759 0.255459026136345 0.281394424110939 0.252649746005266 0.257427903554112 0.264485489277977 0.24914254620813 5 5 - 777198 777850 777580 777020 779423 - gene protein_coding_gene TRUE TRUE AT5G03260.1 LAC11 (laccase 11); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC10 (laccase 10), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G01190.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to putative laccase [Oryza sativa (japonica cultivar-group)] (GB:BAB90733.1); similar to laccase [Pinus taeda] (GB:AAK37829.1); similar to laccase [Pinus taeda] (GB:AAK37830.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.633189225331425 4.97817243768297 0.000468269203842494 0.00812113501304817 8.155149021908 4.49810390582746 0.633189225331425 0.161687598772325 AT5G06870_at 9.52850929710402 9.93762649169091 8.39797107857673 8.63127288646752 9.50898116224326 9.30569413209627 8.50505227705438 8.91893923826848 9.14048203876855 8.60964917350938 10.3848085092957 10.2048245452208 9.777228092209 10.0501272943690 10.0823070499729 10.1906759421880 8.67152678615204 10.1804777046609 8.13158677181055 0.155985210804102 0.145488523583522 0.161500556532822 0.155803141190396 0.147421306577637 0.1626002547916 0.144580169900799 0.146162367403018 0.153149971207353 0.161469977975419 0.144580169900799 0.147878606954864 0.144580169900799 0.149455337966918 0.155251074966971 0.144580169900799 0.171637258714181 0.152144085291829 0.176060474423206 5 5|0 +|/ 2134373 2134993 2134746 2133919 2135167 + gene protein_coding_gene TRUE TRUE AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding polygalacturonase inhibiting protein 2 (PGIP2) mRNA, Identical to Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP2) [Arabidopsis Thaliana] (GB:Q9M5J8;GB:Q9FL58); similar to PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G06860.1); similar to polygalacturonase inhibiting protein [Brassica rapa subsp. pekinensis] (GB:AAX68500.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.526977825647775 4.97648004633364 0.000469489433695540 0.00813904169212388 8.1525469731659 18.3767489797067 0.526977825647775 0.114063195503006 AT5G02780_at 2.59546284221986 2.82525780119230 4.40467425895055 4.34251613195881 3.06413988048733 2.58182564727006 1.48236541762666 2.21854755081686 1.60828726959711 2.05016872533443 2.00291704730174 1.66285280231157 2.07482772994052 2.14797618839417 1.73381561993304 1.70155667304987 2.10053455960459 2.01626953401801 2.34409987033208 0.241426439692720 0.231683388767320 0.251539298932378 0.246534909176277 0.237457721215995 0.231687939154630 0.252743433488229 0.233491976221614 0.234518037683002 0.245430820275418 0.235347892459806 0.233088915760747 0.231345849060100 0.229836651963187 0.229836651963187 0.232825042568993 0.234481736813005 0.235676702039109 0.231487858995857 5 5|0 +|/ 631341 632274 631805.667 630874 632681 + gene protein_coding_gene TRUE TRUE AT5G02780.1 In2-1 protein, putative similar to In2-1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G02790.1); similar to glutathione S-transferase [Pisum sativum] (GB:BAC81649.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.623561195467039 4.97558481285812 0.000470136268251074 0.00814699768252536 8.15117038107388 4.90482155351883 0.623561195467039 0.157779974785202 AT5G15010_at 2.57307316686789 3.01940320977932 2.92510959309695 3.68482317843211 3.78790453545963 3.27246064266061 2.71912177837551 2.79037684775541 2.38828459375025 2.61869306752812 3.26415550288877 3.76478728430377 3.2700563840277 3.42607050128197 3.1387774327429 3.26764510795884 3.20101210238767 2.74817085804807 2.68113130115679 0.171821000760509 0.174410454105401 0.175390253909509 0.174229766173612 0.176599285698792 0.175116233228629 0.175129250397379 0.178395679177496 0.171766316773100 0.183615657368756 0.175641828650657 0.171820202509500 0.180467404475482 0.178929613082881 0.173746583311147 0.170897767250962 0.182949489677277 0.180363773203292 0.174221295528236 5 5 + 4858374 4858931 4858607.909 4857262 4858962 + gene protein_coding_gene TRUE TRUE AT5G15010.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G80880.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82704.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.669731072972185 4.97118455904521 0.000473329355183805 0.0081990537288117 8.14440242065782 6.0079278111451 0.669731072972185 0.177086164442337 AT5G06520_at 1.9087086828478 1.60183363549523 2.66221334482204 2.69122633263755 2.45597645173306 2.50253026648976 2.1178748508097 2.06325750788985 2.17538101486337 2.20375224610469 2.79048015998118 1.75751555150255 2.32218387145407 2.29021495617679 2.16019534106751 1.87186403366356 2.68181337582804 2.40660988104263 1.87098735293364 0.224750581491788 0.202555215861332 0.207684035918581 0.201693834704142 0.208002000749006 0.208742517080751 0.204236418107303 0.21153085600886 0.208839885418039 0.206647423478119 0.207427373324655 0.205418047130138 0.201270215484845 0.213766023009624 0.213385799651439 0.207414091677386 0.200973766884926 0.207400862975539 0.203481820969609 5 5|0 -|/ 1987310 1987867 1987602.8 1987251 1989373 - gene protein_coding_gene TRUE TRUE AT5G06520.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G14650.1); similar to PREDICTED: similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120) isoform 5 [Canis familiaris] (GB:XP_865871.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) 0.428402019016132 4.97033708785194 0.000473946967114589 0.00820449431350573 8.14309860829377 4.43469422624401 0.428402019016132 0.0547696440121828 AT5G50930_at 2.3554988749826 2.31871546218147 3.28489686716383 3.13435979030730 2.5118617432566 2.63269403934150 2.56394685431102 2.1841901112291 2.25150330726762 2.12826350539573 2.7180123336445 2.97863531279988 2.82521711289299 2.76097006136823 3.1426750375452 2.94088514619866 2.64711081130009 2.27987789751608 2.85896473218878 0.216742982002275 0.207879424001312 0.218327822717424 0.212041845364149 0.205610254203212 0.205610254203212 0.210798482004777 0.205610254203212 0.212718556790984 0.222597986840764 0.206363876849084 0.208317407584333 0.211665854062906 0.209566767627132 0.206152002895720 0.206657708618917 0.210001495491797 0.219275180727338 0.223741393986866 5 5|0 +|/ 20739793 20741506 20740603.333 20739295 20741661 + gene protein_coding_gene TRUE TRUE AT5G50930.1 similar to OSJNBa0039C07.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05152.2); similar to Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain-containing protein 1 homolog) (GB:Q6NRI8); similar to Os04g0397700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052668.1); contains InterPro domain Histone-fold; (InterPro:IPR009072) 0.454563866774378 4.97008722081638 0.000474129225858295 0.00820449431350573 8.14271417400009 5.22306220740114 0.454563866774378 0.0739958063736437 AT5G49450_at 7.66229202277905 7.9804713716297 7.71820804886936 8.25862443271895 9.31892994848258 9.18969549702112 6.72294038834624 7.16873949233992 7.62976020757014 7.52516478520314 7.67457821514095 7.54185539400871 7.90498672346605 7.55647564699784 7.36539640533945 7.8954171712549 7.90524506105245 7.73922608971577 8.22771206885615 0.127032571906395 0.129502739751196 0.132127554571655 0.123869677262445 0.132081804357190 0.130713768125026 0.131648523982302 0.122395673274858 0.134054191470343 0.123679000291543 0.122944465031792 0.128597113913086 0.125816353997685 0.129193050541842 0.125671016169961 0.126894286189033 0.129838840289576 0.135295585512712 0.126169879258116 5 5 + 20069388 20069773 20069602.909 20069055 20069961 + gene protein_coding_gene TRUE TRUE AT5G49450.1 bZIP family transcription factor similar to GBF6 (G-box binding factor 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE85416.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.570719448747405 4.96997496817288 0.000474211129697548 0.00820449431350573 8.14254146406262 15.7485426213976 0.570719448747405 0.135018835791909 AT5G15870_at 5.86698865625232 5.91399720867849 7.07718426409621 7.03042756319586 5.96718458002984 5.47221500540851 4.23852611091108 3.60778489935039 5.56178325283083 4.69096171933928 4.42554283122504 5.46948584674091 4.08087021905883 4.4489887403198 4.61756798998833 4.57049266033976 4.96939575922114 4.96737892227726 4.79081795972604 0.302612694923717 0.291587271877675 0.307427498793577 0.298156486022556 0.288651750892809 0.290915066616567 0.292547522399126 0.28867809253565 0.296593430747087 0.291725569715290 0.291005152728263 0.288651750892809 0.294188862543104 0.289095487245536 0.291669143584442 0.288651750892809 0.290003962375791 0.290321769074051 0.290542003335111 5 5 - 5182646 5183216 5183032.182 5182644 5184881 - gene protein_coding_gene TRUE TRUE AT5G15870.1 glycosyl hydrolase family 81 protein similar to glycosyl hydrolase family 81 protein [Arabidopsis thaliana] (TAIR:AT1G18310.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96863.1); similar to beta-glucan-binding protein 4 [Medicago truncatula] (GB:ABB69784.1); similar to putative beta-glucan elicitor receptor [Brassica napus] (GB:AAP42646.1); contains InterPro domain Glycoside hydrolase, family 81; (InterPro:IPR005200) 0.579561514116099 4.96557616737402 0.000477432503372632 0.00825464972776249 8.1357720732108 10.5009067102129 0.579561514116099 0.139223025436453 AT5G40740_at 3.60499355153396 3.71006061815773 3.10178278439822 3.29829749641539 5.03372245690312 4.32554782339709 3.60197922868469 3.28915814601717 3.41413482395793 3.53800987492144 3.70369292284686 4.8560519690036 4.31634407919237 4.69475533000472 4.34278429965213 4.22787255182752 3.9146523400304 4.14574064193622 3.55852121206068 0.238575555474327 0.228727276894935 0.234140761587565 0.235816398053407 0.233254727732704 0.235048231563058 0.228727276894935 0.228727276894935 0.258303363332939 0.236845512586875 0.245108651481922 0.228727276894935 0.228794329265176 0.237703379249538 0.241692459525337 0.230335002087434 0.228727276894935 0.232138557895572 0.231739685953704 5 5|0 -|/ 16319730 16320400 16320037.9 16319142 16323641 - gene protein_coding_gene TRUE TRUE AT5G40740.1 similar to Os02g0329300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046716.1); similar to serine-threonine rich antigen [Staphylococcus aureus] (GB:AAL58470.1) 0.579985608672556 4.9654968069355 0.00047749083400373 0.00825464972776249 8.13564991766959 7.63508879841763 0.579985608672556 0.139416499903898 AT5G47360_at 3.65842596287187 3.69657774662645 4.14812231934544 4.44173689390567 4.00950647420201 4.56138766057691 4.20114913894997 3.80436435370658 3.97181835749205 3.91481332356175 4.6355099959016 4.53349629730518 4.33634076081886 4.59157261738832 4.75083900946439 4.60731551399895 4.57901700279261 4.53264860388754 3.84440405890625 0.202583124030738 0.204741932757819 0.199707975471803 0.205802368539249 0.200753589288570 0.216881020753424 0.205105466854210 0.204348062273328 0.204284729805240 0.211033809725782 0.199707975471803 0.207465431872456 0.203225372106671 0.205735546679828 0.20828165185428 0.199707975471803 0.217605434061346 0.213485199930249 0.20098563846462 5 5 - 19231808 19232180 19231984.1 19231672 19233105 - gene protein_coding_gene TRUE TRUE AT5G47360.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G12775.1); similar to PPR repeat containing protein [Brassica oleracea] (GB:ABD64962.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.555278132505062 4.9629499670768 0.000479366801366628 0.00828377767771281 8.13172919841105 8.30575267969713 0.555278132505062 0.128302975948900 AT5G49810_at 8.9560599967141 9.1543747845019 9.76151451164708 9.78465154996892 9.54771392318658 9.15854607461114 9.53236504201629 9.57783124489353 8.92068931703515 8.90888716612618 9.46012392170694 9.3555307065772 9.45756599117497 9.59060672592052 9.24848003191724 9.57145584781485 9.36549972844972 9.63729538741345 8.58700653327925 0.0957374272867746 0.094864795020904 0.100925322002448 0.099309796437865 0.100757068549540 0.109720037675500 0.0989953183981715 0.0976222681904314 0.100083636137279 0.0969114105436461 0.0963697360960218 0.0958564551725777 0.0955570610379268 0.0982298169499445 0.0972262426095477 0.0942346552629 0.100474344711141 0.0945549739143062 0.0992280930392296 5 5 + 20262461 20263180 20262839.273 20256569 20263606 + gene protein_coding_gene TRUE TRUE AT5G49810.1 MMT (methionine S-methyltransferase); S-adenosylmethionine-dependent methyltransferase Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation. Identical to Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S- methyltransferase) (MMT1) [Arabidopsis Thaliana] (GB:Q9LTB2;GB:Q9SWR2); similar to ACS5 (ACC SYNTHASE 5), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT5G65800.1); similar to Methionine S-methyltransferase (AdoMet:Met S-methyltransferase) (GB:Q9SWR3); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE78969.1); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE91874.1); contains InterPro domain Methyltransferase small; (InterPro:IPR007848); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.456620434148491 4.95729679610671 0.000483558824546878 0.00835288946018852 8.12302301443121 18.5673058733268 0.456620434148491 0.076101340347222 AT5G54630_at 8.90270086679428 9.1104256815855 9.59496103178762 9.58990060949102 10.4330666529035 9.91974948055246 9.7643354898488 9.54166173011634 9.57165274593851 9.54029687935587 10.3554928391265 10.2074455312373 10.0838751101077 10.0678102055014 9.8547910954798 10.2586848551913 9.68299679078952 9.9190658929506 9.69063499944614 0.0983067567199669 0.0907788064977376 0.0944907954434953 0.092831355044336 0.0917117229472614 0.0996073101462967 0.0903807805227416 0.0929921975750213 0.0935193630569862 0.097731967774584 0.094694774687776 0.0918237801075567 0.0908726861874248 0.0942268691861813 0.0934596311774157 0.0919666367380104 0.0946552469767726 0.0955045019022666 0.0981671543399819 5 5 - 22209833 22210269 22210093.091 22209725 22211534 - gene protein_coding_gene TRUE TRUE AT5G54630.1 zinc finger protein-related similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G27240.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE93174.1) 0.503773625032621 4.95701425840299 0.000483769353076913 0.00835319811663113 8.12258776694535 19.4344161086990 0.503773625032621 0.103291069395331 AT5G51630_at 3.91386608714452 3.69085767253824 4.80113943533972 4.70660183504583 4.14475480892115 3.29640509591182 2.92238742471724 2.53267240002223 3.11572173022684 3.34714298417134 3.61506878074611 4.23811207681481 3.77177687501408 3.76179503388601 3.47688626105922 3.68600951684641 3.15907430723094 3.75590319820029 3.64562393791829 0.252274486813355 0.254044830486909 0.253135773516312 0.257976165119373 0.253317852438325 0.256619082524289 0.253346799578173 0.263333298813475 0.257070103602810 0.247060284796085 0.250389789500783 0.246481152351806 0.252802582069682 0.253803838847183 0.249441042807263 0.248239179631346 0.257861057728033 0.260316961610287 0.252416111236993 5 5|0 +|/ 20991068 20991464 20991265.111 20986847 20992142 + gene protein_coding_gene TRUE TRUE AT5G51630.1|AT5G51630.2 disease resistance protein (TIR-NBS-LRR class), putative similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16940.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.2); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16940.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.2); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.642930718242492 4.95636429286348 0.000484254033608924 0.00835823839868277 8.1215864543356 7.27737283178687 0.642930718242492 0.166909868308169 AT5G40180_at 2.66464224065859 2.49236385735055 2.82288307610668 2.76227589725692 3.50635057580037 3.46806539094806 2.49222942496136 2.24407515176177 2.56889341623180 2.83374544137578 3.03033116246412 2.56377042649272 2.88211911635829 3.15995885610707 2.2561468423476 2.44258280278121 2.87197049163644 2.65359155836005 2.23949837244076 0.188942608147908 0.194345047247094 0.182386622561386 0.190221168173906 0.200866453047228 0.189521853008489 0.182386622561386 0.188014955162193 0.197968192206263 0.183546548194582 0.184236077181522 0.182386622561386 0.186420525534394 0.184985803878886 0.188341619458596 0.182386622561386 0.186407961072580 0.192199857103031 0.186527950899012 5 5|0 +|/ 16085155 16085409 16085320.2 16085151 16085434 + gene protein_coding_gene TRUE TRUE AT5G40180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28150.1) 0.425872948365298 4.95523098788588 0.000485100372882735 0.00836951442556234 8.11984037720614 5.44657969373115 0.425872948365298 0.0537304411350093 AT5G65560_at 3.15122275075724 3.74698289232225 3.81891320685192 4.48637150553643 4.21639545769534 4.06844362138063 3.25632788161088 3.22635976069758 3.146102346614 3.09281796810119 3.5391276262847 3.75565570837085 3.42736281712551 3.40257397748641 3.49182048852352 4.09258839741644 3.78164241706267 3.68362013463168 3.40422198578313 0.204873827656708 0.200674798386408 0.196319100330402 0.191537832810970 0.203524069963231 0.204453403879180 0.200241218377252 0.191664208522116 0.19626849064196 0.188354746311988 0.194615721140917 0.201124511029998 0.201174915279920 0.195106257630677 0.188354746311988 0.189385592979236 0.194880756082104 0.195312147278609 0.206405807410031 5 5 - 26218247 26218785 26218500.545 26218238 26221004 - gene protein_coding_gene TRUE TRUE AT5G65560.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07290.1); similar to Os06g0690900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058418.1); similar to putative fertility restorer homologue [Oryza sativa (japonica cultivar-group)] (GB:BAD30981.1); similar to Os02g0582300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047252.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.61736290277452 4.94046729962923 0.000496270115849466 0.00855882197134762 8.09707664836917 7.17696699095428 0.61736290277452 0.157014906490745 AT5G39380_at 2.57767057524986 2.47836340312482 2.81561950871371 2.86951779291618 2.57427681279908 3.06347833859991 2.37403930008372 2.31497497578370 2.65978572148780 2.39126170531965 3.07781853809458 3.08624261459459 3.10542451241321 2.82055537566459 3.12883457004728 3.12334192569978 2.92217065108965 2.99523134115957 2.38855999871946 0.171970992022052 0.166922856560252 0.170991692671952 0.164508601374339 0.164445640742269 0.173894944461480 0.165421356951417 0.164445640742269 0.179036947396699 0.167438659373573 0.171200099724028 0.171440593539118 0.166643479983354 0.168874751274824 0.166463418129462 0.167606531250393 0.166617343299862 0.167094956929682 0.166525261355565 5 5 - 15776398 15776922 15776642.545 15775945 15777914 - gene protein_coding_gene TRUE TRUE AT5G39380.1 calmodulin-binding protein-related similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G15430.1); similar to Os12g0506500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066838.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to hypothetical protein DDBDRAFT_0167567 [Dictyostelium discoideum AX4] (GB:XP_644266.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.473522174474899 4.93990094562964 0.000496703993371404 0.00856289866670498 8.09620275967019 5.38965337987773 0.473522174474899 0.0874865639587834 AT5G43150_at 9.49930379499318 9.92948275941727 10.6409659050946 10.7488691962824 10.6620846407777 10.7966767316614 10.5891992545275 11.2111532818768 9.79360607272357 10.4324456780838 10.8710050587945 10.8192463245861 11.1376700520217 11.0233405204829 10.0047185034689 11.4935811316532 11.3611777628176 11.0420405246666 10.5029173845915 0.101026614698723 0.097007660449219 0.096192014471581 0.0989190151596202 0.096688406628398 0.101454274824298 0.0982569123411313 0.096192014471581 0.103765730823152 0.0987297928630648 0.0973635265342221 0.0969694884273963 0.0998501296120184 0.0992908114685385 0.099269372080083 0.096192014471581 0.105354833953477 0.100713401938192 0.096192014471581 5 5|0 +|/ 17342324 17342887 17342656.5 17342243 17343151 + gene protein_coding_gene TRUE TRUE AT5G43150.1 similar to hypothetical protein MtrDRAFT_AC141109g4v1 [Medicago truncatula] (GB:ABE79896.1) 0.565486059381084 4.9394523831806 0.000497047917371272 0.00856542198945866 8.0955105905772 21.1157605438844 0.565486059381084 0.134230517330359 AT5G58330_at 11.2083983812071 11.3038288823483 12.0342023523602 12.0151083153799 11.9720946366790 11.8075271306342 12.019525509593 12.0032890400647 11.7602558375881 11.9900266010800 12.2285058702238 12.2770195559007 12.2851751049955 12.2878840126363 12.2996926022299 12.4477186999661 12.3965135371559 12.3324356204222 11.7505552355292 0.0644743656104563 0.062121367499019 0.0671083589724672 0.0654780871408515 0.0626114924422814 0.0691982897187715 0.061501743524476 0.0620828320227534 0.0670312629117664 0.0617355213700757 0.0625653602678573 0.0625364392276593 0.0621067050267204 0.0633056871085485 0.0650686476466865 0.0621407788874469 0.0673386776781382 0.0670944078690475 0.0653887677985 5 0|5 /|- 23597247 23598192 23597650.625 23596948 23599621 - gene protein_coding_gene TRUE TRUE AT5G58330.1|AT5G58330.2|AT5G58330.3 malate dehydrogenase (NADP), chloroplast, putative similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G56720.1); similar to malate dehydrogenase [Solanum lycopersicum] (GB:CAH60894.1); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:P21528); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:O48902); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants; (InterPro:IPR011273); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants and bacteria; (InterPro:IPR013001)|similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G56720.1); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:O48902); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants; (InterPro:IPR011273); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants and bacteria; (InterPro:IPR013001) 0.404614111417805 4.93878845747976 0.000497557429024894 0.0085707956773153 8.09448604345823 23.8719871227868 0.404614111417805 0.0332056005459651 AT5G15170_at 4.08210090213048 4.17114128112906 4.2691106161189 4.14952162833147 5.704402136562 4.6558369839032 4.22775093161266 3.8019209190542 4.8158372680638 4.29359943957693 5.2949328824274 5.5354529064097 5.86601004149564 5.87188661664135 5.14155956788759 6.19954175782016 5.42805300829828 5.25452979805183 5.19289852373902 0.260930254466018 0.251772186487377 0.257494595713465 0.262102402132444 0.259866798105031 0.27232390999175 0.251515861408112 0.254459493121207 0.259808602119537 0.257125327541150 0.256260898720419 0.258641819559587 0.252729674557296 0.268014512000254 0.263929463937268 0.252457622290070 0.275854672834733 0.261189421690327 0.260109307907024 5 5|0 -|/ 4926486 4927217 4926752 4926097 4929505 - gene protein_coding_gene TRUE TRUE AT5G15170.1 tyrosyl-DNA phosphodiesterase-related similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07400.1); similar to Os07g0530100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059844.1); similar to Forkhead-associated; Tyrosyl-DNA phosphodiesterase [Medicago truncatula] (GB:ABE78603.1); contains InterPro domain SMAD/FHA; (InterPro:IPR008984); contains InterPro domain Tyrosyl-DNA phosphodiesterase; (InterPro:IPR010347) 0.715270038999851 4.9302547905827 0.000504155862931757 0.00868100964342114 8.08131137938295 9.55344362460803 0.715270038999851 0.197543986607971 AT5G27490_at 2.97206861066792 3.5734813900843 3.58347522194096 4.16008560538329 3.85014024301455 3.21250763054879 3.16885986070641 4.13573351802276 2.42070702738549 3.84036598615703 4.40820335846235 5.26178495953198 4.53787014943753 4.67173302245554 5.06599179036701 4.36180681245416 4.15768679279366 4.31104497283273 3.18109496950227 0.276558348558198 0.257402467000754 0.263122053269193 0.266357803703492 0.265300887065764 0.263901332291105 0.257671430089436 0.269698987514129 0.277761144767675 0.257402467000754 0.261313889060854 0.265999781447344 0.257402467000754 0.258745734842318 0.261016508590314 0.261238895873306 0.279751230968782 0.258576182406217 0.261626469289737 5 0|5 /|- 9703139 9703670 9703366.9 9702838 9704678 - gene protein_coding_gene TRUE TRUE AT5G27490.1 integral membrane Yip1 family protein similar to integral membrane Yip1 family protein [Arabidopsis thaliana] (TAIR:AT3G05280.1); similar to hypothetical protein DDBDRAFT_0204543 [Dictyostelium discoideum AX4] (GB:XP_640517.1); similar to Os01g0610500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043545.1); similar to Os05g0455800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055726.1); contains InterPro domain Yip1 domain; (InterPro:IPR006977) 0.844321117480908 4.92912025786983 0.000505040069806604 0.00869077036034784 8.07955902512316 7.45424629003285 0.844321117480908 0.246904608757976 AT5G67530_at 7.1324463295301 7.35621244661745 7.9733639407117 7.80077525319777 8.39057061469086 8.0043466027682 7.44494898845757 6.65401792640657 7.46485356377778 7.39111825209617 7.74485327020507 7.7691047387552 7.45588063807515 7.65184499414314 7.70036371683189 7.89394860539463 7.71369517034301 7.87553038124507 7.26966507422456 0.158891943782792 0.153008644092364 0.153323598637395 0.156192488763919 0.158289804201937 0.155950845784378 0.156630890171575 0.157961492857889 0.177012463149542 0.153162601767142 0.154893105706252 0.152519246502520 0.158462215833672 0.157706943766683 0.164043564714148 0.154572628937160 0.156510443984172 0.151757459193371 0.160459668074004 5 5|0 +|/ 26960394 26961050 26960711.5 26958408 26961372 + gene protein_coding_gene TRUE TRUE AT5G67530.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT1G01940.1); similar to Os03g0201100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049295.1); similar to peptidylprolyl isomerase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94499.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130); contains InterPro domain U box; (InterPro:IPR003613) 0.622899036381928 4.92901316881054 0.000505123615327961 0.00869077036034784 8.07939360978094 15.1450177558344 0.622899036381928 0.159979565906609 AT5G58350_at 8.86091339638807 9.15576458695456 10.0231527978079 10.1499909044309 9.9534315927818 9.5058947051082 8.42589743868184 8.64699259612438 7.3148703530728 8.03397646554627 6.24961974971055 6.08020561705095 8.42743457127457 8.05980723164022 5.85329698259452 8.91833780121483 9.15669943924127 7.38490180247846 7.60915205751495 0.217898778928372 0.217898778928372 0.226745932133894 0.221041724789934 0.217898778928372 0.219219986995889 0.222829791516680 0.217898778928372 0.23800788908134 0.22106418175709 0.230814106044597 0.229225190350619 0.217898778928372 0.225085579133166 0.226124900024810 0.217898778928372 0.219979187023783 0.230178890093545 0.223133348090115 5 5 + 23604253 23604869 23604548.545 23602015 23605027 + gene protein_coding_gene TRUE TRUE AT5G58350.1 WNK4 (Arabidopsis WNK kinase 4); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. similar to WNK5 (Arabidopsis WNK kinase 5) [Arabidopsis thaliana] (TAIR:AT3G51630.1); similar to mitogen-activated protein kinase [Nicotiana tabacum] (GB:AAQ83971.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.499673551425499 4.92763656335324 0.000506198879026049 0.00870581583582712 8.0772670823283 16.9247318480074 0.499673551425499 0.102701413390298 AT5G43730_at 1.74222699523074 1.67019426602947 2.517524337918 2.56274643405737 2.28155468247040 1.48936095078839 1.60739005353098 1.30483018342827 1.82602372500720 1.86559652862466 2.42348844202652 2.62324821859316 2.66444581407203 2.75988576772066 2.44487590083801 2.78158344143038 2.51880784365033 2.06347220813717 2.25947744603474 0.190127191435986 0.18963963850809 0.189283779861096 0.196771604419381 0.189671181090206 0.185305483604499 0.195341277799255 0.188432021678647 0.207055667346289 0.194484602074389 0.190703151482501 0.190117009303192 0.189818485525406 0.185305483604499 0.185672205202058 0.187260773458809 0.197924423561922 0.191089355927882 0.1883352191819 5 5 + 17579506 17580008 17579768.727 17577494 17580040 + gene protein_coding_gene TRUE TRUE AT5G43730.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g43730 [Arabidopsis Thaliana] (GB:Q9FG91); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43740.2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G15890.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.591456474045005 4.90866959684331 0.000521263395808557 0.00896134689164572 8.04793915260042 4.15631608182207 0.591456474045005 0.147487570618919 AT5G13330_at 2.00810080304376 2.20575102723151 3.06479265471337 2.93844998716648 2.15933391996619 2.22828075531966 1.25841245603937 1.49244117793639 1.87245217650431 1.59607418743994 1.80314557530221 1.41310855579146 1.30477432066440 1.65272152913299 1.77824430704352 1.6111469219162 1.90589762792304 1.58531069022712 1.43204601446022 0.232605408527852 0.232605408527852 0.261095680488453 0.239583273669119 0.250102812200418 0.237720370861378 0.238731773264222 0.240708943750145 0.240943871213698 0.2368319172065 0.235883853048485 0.233803354802941 0.238881804400413 0.23625985789488 0.241057709051714 0.240852887626386 0.239311045409603 0.241525920692453 0.237413022095642 5 5 + 4273973 4274318 4274133.455 4272063 4274663 + gene protein_coding_gene TRUE TRUE AT5G13330.1 RAP2.6L (related to AP2 6L); DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G07310.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80204.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.427403764046978 4.90527281302107 0.000524011076080745 0.00900501330178459 8.0426812273392 3.80210425624456 0.427403764046978 0.0585710634911261 AT5G50250_at 8.49008760835709 8.64828121123633 9.21922109274133 9.0533898919001 9.36374824535084 8.67684369993859 9.14605576256144 8.84907108986502 7.98166097808596 8.64943440567572 9.28157973394792 9.28965189310914 9.12248208053857 9.12491692486932 9.57189484606718 9.47334618846337 9.03390804362556 8.88925298288892 8.54261831108493 0.120179566536084 0.118375320759519 0.119271945503566 0.116577613151341 0.119691686416076 0.121344491181862 0.117181426742004 0.120119527039154 0.132814178748399 0.122683901660346 0.121540693932101 0.115882055868579 0.11649688749547 0.12024882914433 0.125400176682681 0.121725777747637 0.128595929639659 0.130273848868522 0.125973049589538 5 5 - 20470059 20470867 20470421.818 20469713 20471239 - gene protein_coding_gene TRUE TRUE AT5G50250.1 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative similar to RBP31 (31-KDA RNA BINDING PROTEIN), RNA binding [Arabidopsis thaliana] (TAIR:AT4G24770.1); similar to RNA-binding protein 2 (GB:AAA18379.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.563534001442147 4.89933977299464 0.00052884721880364 0.00908452065231268 8.03349332160505 17.7381458177293 0.563534001442147 0.135443657231246 AT5G55900_at 3.13002842850966 3.5793069118047 4.40460784253571 3.49209681895999 4.51559750581601 4.73773042382601 3.70779125751912 3.62551593261392 3.55314181876174 3.52397238264229 4.61022764405476 3.95959558082691 4.33108023456719 4.21992877318914 4.07744504341915 4.17054518511415 4.09766014146585 3.70312542217826 3.68080376900875 0.231305433385437 0.226149541763483 0.221874268106798 0.221874268106798 0.22683461179569 0.228310675350141 0.223364148314426 0.22340860831134 0.243587281040405 0.226943315640428 0.228446484801764 0.223146726977150 0.223214867248167 0.236038257623247 0.226618437622499 0.22705225487779 0.229796952647703 0.228134883530719 0.223115375380085 5 5 + 22656048 22656790 22656466.455 22654757 22656987 + gene protein_coding_gene TRUE TRUE AT5G55900.1 sucrase-related similar to sucrase-related [Arabidopsis thaliana] (TAIR:AT4G26620.1); similar to Clostridium pasteurianum ferredoxin homolog [Solanum tuberosum] (GB:AAB33256.1); similar to Os02g0725100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047981.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Sucraseferredoxin-like; (InterPro:IPR009737); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.668537930735125 4.89633695022464 0.000531312879964661 0.00912326109683441 8.02884117511464 7.76517122015123 0.668537930735125 0.180727389805769 AT5G58930_at 8.1772021021295 8.4099064479537 8.70362175550123 8.84653423145105 8.94090341598799 8.84233025783765 8.0236882464376 8.37111634579126 9.12005365354313 8.86859642897774 9.21293626305456 9.33331280280353 8.9872408517671 9.25651232912956 9.1799560446193 9.39620419283477 9.38115381719193 9.42923521823208 8.8646437107467 0.132303332978133 0.122715994273063 0.134486387567411 0.122321213635401 0.125843277695732 0.126245821060168 0.139161825311316 0.129663457368896 0.128329375061706 0.122363448624308 0.125031584243517 0.122821425056392 0.126323012797165 0.126748227343402 0.122321213635401 0.125298578472423 0.127477418911101 0.122321213635401 0.126395692625172 5 5 - 23811788 23812318 23811987.818 23811541 23813687 - gene protein_coding_gene TRUE TRUE AT5G58930.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46990.1); similar to Os05g0450600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055704.1); similar to Os01g0852400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044827.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU90119.1); contains InterPro domain Protein of unknown function DUF740; (InterPro:IPR008004) 0.454420069240691 4.89561461169947 0.000531907817507281 0.00912796317733996 8.02772188856168 17.6509962859079 0.454420069240691 0.0783534952034917 AT5G39900_at 2.25549601157351 2.80025718543432 2.82844422185124 3.23987418893001 3.49482059428903 3.22113223269847 2.60920427778321 2.75790860933232 2.88909352614530 2.28083264108626 3.08158923903276 3.07205697400903 3.61246039813055 2.95454646485580 3.09906695167913 3.2773994405058 3.19707522984455 3.04955906173399 2.79882399664533 0.176825765729596 0.182574596617253 0.188771673535925 0.177462872907996 0.178326974480462 0.178811331226854 0.176132372963329 0.186011854730386 0.190900326156863 0.188983427678584 0.185562210976799 0.180888906010264 0.180027188485962 0.181877288434511 0.179835947768538 0.178806569862276 0.182706976368020 0.176680113207763 0.176629838999975 5 5 - 15993981 15994522 15994327.727 15993775 15996229 - gene protein_coding_gene TRUE TRUE AT5G39900.1 GTP binding / translation elongation factor similar to GTP-binding protein LepA, putative [Arabidopsis thaliana] (TAIR:AT5G08650.1); similar to PREDICTED: similar to CG32527-PB, isoform B isoform 1 [Danio rerio] (GB:XP_682683.1); similar to PREDICTED: similar to CG32527-PB, isoform B isoform 5 [Danio rerio] (GB:XP_706635.1); similar to PREDICTED: similar to GUF1 GTPase homolog (S. cerevisiae) [Strongylocentrotus purpuratus] (GB:XP_791097.2); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Elongation factor G, III and V; (InterPro:IPR009022); contains InterPro domain Translation factor; (InterPro:IPR009000); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain Elongation factor G, C-terminal; (InterPro:IPR000640); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain GTP-binding protein LepA; (InterPro:IPR006297); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) 0.551035226879837 4.8954933335923 0.000532007774597052 0.00912796317733996 8.0275339567451 5.8130018025363 0.551035226879837 0.129855318089326 AT5G50990_at 3.17030091513086 3.02151188020462 3.74336718922524 3.77293793056233 3.65854953950059 3.77880499781979 3.2102547453414 3.65967885870854 2.90622815111167 3.08216442062452 3.24432315379289 3.70128955130168 3.55701096124583 3.3905511391529 3.31121986604945 3.97656981882998 3.45766052227609 3.51931898213565 3.20581551238246 0.204293902933415 0.204321289625668 0.206913639251156 0.211687648247187 0.207451594164295 0.210443147633547 0.212235156762196 0.204608720583388 0.208894071516257 0.213702108768754 0.205141030663757 0.201685363124908 0.201552744933686 0.205720298673422 0.207066203376886 0.202781306026773 0.205861057173339 0.219099540815509 0.20430820473821 5 5 + 20757911 20758444 20758149.818 20756645 20758507 + gene protein_coding_gene TRUE TRUE AT5G50990.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G62890.1); similar to PPR868-14 [Physcomitrella patens] (GB:BAD67154.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE91570.1); similar to Os07g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058748.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.463992642869571 4.88927872686517 0.000537156561566966 0.00921265818498976 8.01790094434362 6.79416527075548 0.463992642869571 0.0846829898518031 AT5G04590_at 10.4175221734650 10.5470102287603 10.8905407522486 10.8586619195429 10.6831382530187 10.5330277020275 11.0318384066934 11.0308632686847 9.9789162070349 10.6707315301623 11.4171249421239 11.2775714829522 11.1059577503679 11.1305532021194 10.8877099616285 10.8617912175057 10.8892920853291 11.4413871902380 10.2763642773999 0.0961374698833444 0.0898353647612893 0.0968619499676688 0.091072545353991 0.0906787390690107 0.0998376215127758 0.0926074592694509 0.0914949379821926 0.0939585342511486 0.0941275391652591 0.088420851131149 0.0888463621042643 0.0880217580221571 0.0967455903455575 0.0898471106776046 0.090259453994058 0.0970026532120928 0.0889436637844619 0.0906839519332722 5 0|5 /|+ 1321554 1322049 1321760.444 1319357 1322525 + gene protein_coding_gene TRUE TRUE AT5G04590.1 SIR (sulfite reductase); sulfite reductase (ferredoxin) A.thaliana gene encoding sulfite reductase. similar to NIR1 (NITRITE REDUCTASE), ferredoxin-nitrate reductase [Arabidopsis thaliana] (TAIR:AT2G15620.1); similar to sulfite reductase [Pisum sativum] (GB:BAD12837.2); similar to Sulfite Reductase [Nicotiana tabacum] (GB:BAA33531.1); similar to sulfite reductase, ferredoxin dependent [Asparagus officinalis] (GB:ABB55339.1); contains InterPro domain Nitrite/sulfite reductase, flavoprotein alpha-component, domains 1 and 3; (InterPro:IPR011255); contains InterPro domain Ferredoxin-nitrite reductase; (InterPro:IPR008287); contains InterPro domain Nitrite and sulphite reductase 4Fe-4S region; (InterPro:IPR006067); contains InterPro domain Sulfite reductase, ferredoxin dependent; (InterPro:IPR011787); contains InterPro domain Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; (InterPro:IPR005117); contains InterPro domain Nitrite and sulfite reductase iron-sulfur/siroheme-binding site; (InterPro:IPR006066) 0.401143222404643 4.88203253271759 0.000543226737119772 0.00931308250509336 8.00666174119511 21.4666224133379 0.401143222404643 0.0347480427280133 AT5G08270_at 3.08498196837325 3.09772559714233 3.6682499843057 3.76312728742073 4.18603138371749 3.72215620600297 4.06088749390577 3.8926652983181 3.28042779201297 2.62048708829092 3.67597108736146 4.10286921270823 4.1176792833488 3.71008419397777 3.91387136804858 3.76952077034188 3.7143055423145 3.37863490376866 3.59333037636236 0.22444466214251 0.219231817791685 0.219119736171145 0.215809994170797 0.215922104812938 0.231237156563958 0.215809994170797 0.215809994170797 0.228758519216573 0.221170728297416 0.221983972315104 0.225119298466849 0.215914614361074 0.21602661310256 0.223374976606945 0.215847811241425 0.227666958932445 0.222878577387824 0.22094960472661 5 5 + 2662884 2663369 2663150.636 2661659 2663628 + gene protein_coding_gene TRUE TRUE AT5G08270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23200.1); similar to Os02g0634600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047513.1); similar to hypothetical protein MA4_54B05.28 [Musa acuminata] (GB:ABF70082.1) 0.466972376135924 4.88039137807804 0.000544611604949526 0.00933313424309986 8.00411515854539 7.16578588445953 0.466972376135924 0.0869835111971194 AT5G13590_at 4.0846916138634 4.1944124610194 5.27715320081084 4.56525349004641 5.7335523920235 5.04006615950904 4.8909059803477 4.01006596447089 3.43921846744928 3.65588446493531 3.98061531305078 4.14847818036326 4.41371444125059 4.38580343392508 3.80937820739501 4.51882286542947 4.46975752477540 4.16641133832205 3.43499961968318 0.204900436770398 0.204900436770398 0.208376362480732 0.204900436770398 0.213463204950444 0.217621414881178 0.204900436770398 0.210523577500445 0.218742246877845 0.21345244264222 0.206786340688676 0.204900436770398 0.204900436770398 0.204934719953749 0.209527236161714 0.207599225470954 0.208567950519922 0.204900436770398 0.212576148315308 5 5 - 4374731 4375285 4375059.636 4374721 4378478 - gene protein_coding_gene TRUE TRUE AT5G13590.1 similar to unnamed protein product; gene_id:MSH12.5 unknown protein [Medicago truncatula] (GB:ABE91365.1) 0.792787892356732 4.87945552766303 0.000545402984060055 0.0093430034020809 8.00266282071533 8.59784108130467 0.792787892356732 0.230600917518348 AT5G47455_at 3.80288364414328 3.52289436856142 3.62322495836398 4.18814881609216 4.09538735306916 4.39821263615532 3.11549405782768 3.92419391010202 2.59621915408633 2.32086330673518 3.21526933479326 3.37577277741443 3.44833386384121 2.86614612664468 3.58426837415385 3.58865284990147 3.54312653658748 3.7898286284853 2.75716781944534 0.228077359828419 0.219048243575378 0.242884806201194 0.232916338846030 0.220872827731033 0.219932530150047 0.223242596817171 0.222050832302951 0.241923069096641 0.228094691363182 0.219830614892136 0.219432658338724 0.227798053616112 0.226159367215819 0.221056759596004 0.219345948430505 0.233985989711708 0.221354701653694 0.220731661636928 5 5|0 +|/ 19268045 19268388 19268199 19267948 19269718 + gene protein_coding_gene TRUE TRUE AT5G47455.1|AT5G47455.2|AT5G47455.3|AT5G47455.4|AT5G47455.5|AT5G47455.6 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17310.1); similar to hypothetical protein 26.t00030 [Brassica oleracea] (GB:ABD65009.1)|similar to transcription factor [Arabidopsis thaliana] (TAIR:AT4G17310.2); similar to hypothetical protein 26.t00030 [Brassica oleracea] (GB:ABD65009.1) 0.676609165241825 4.87816200735861 0.000546498823431258 0.00935807824964825 8.00065520656081 6.82605908715604 0.676609165241825 0.185033520119815 AT5G58340_at 4.01006480710912 4.24150206039554 5.58898968267409 5.32057261102668 4.8849890052778 6.261019920452 4.77305686032663 4.86498937882314 5.08889914223033 4.81251767740105 5.40920401903548 5.868433129199 5.53808639509242 5.75158820731168 4.93038328082768 6.18329387670513 5.80271315275689 5.37110375468985 5.03932795632599 0.263640960197929 0.280271145427839 0.247315157142052 0.278951159535376 0.257265978069081 0.266720121468576 0.247315157142052 0.266945575706582 0.264996690577667 0.256291871947561 0.258206084613897 0.253173381961292 0.25457410022467 0.257596868982449 0.256869827341774 0.257233601366376 0.255120173428821 0.249891446134494 0.254534781919255 5 5 + 23600744 23601306 23600944.375 23599721 23601638 + gene protein_coding_gene TRUE TRUE AT5G58340.1 DNA binding similar to TRFL5 (TRF-LIKE 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G15720.1); similar to terminal acidic SANT 1 [Zea mays] (GB:AAV28560.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.83404599824692 4.8767362550252 0.000547709388447879 0.00937510494564839 7.99844207658268 10.2866975335630 0.83404599824692 0.246414503700157 AT5G06265_at 7.24756641006174 7.12342513415004 7.92441941263017 7.8524791638905 8.75029150596207 7.92339586305524 7.6671434882865 7.30911044450067 6.52829738112829 7.05716473218908 7.44964466753425 7.17858321622068 7.40894823220439 7.70789666117962 6.58074180252901 7.81248232843178 7.68419112190298 7.23306248081929 7.22306443275559 0.168875497532193 0.167733669871287 0.163548759112287 0.177614034752792 0.178499773804185 0.163735072057981 0.165282103779596 0.168258253343255 0.17586500222448 0.164296455357781 0.166230488483284 0.165862423257454 0.163231616483434 0.167690073382319 0.188766986190451 0.164286324792085 0.179984293479305 0.1725486675051 0.164503560090316 5 5 + 1906599 1907357 1906902.818 1905293 1908168 + gene protein_coding_gene TRUE TRUE AT5G06265.1 hyaluronan mediated motility receptor-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44280.1); similar to Os07g0250300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059297.1); similar to Os02g0536100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047042.1); similar to Os03g0836500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051825.1) 0.610801707814928 4.87154360911365 0.000552142372769984 0.00944725437150134 7.99037924954318 14.8837885924223 0.610801707814928 0.157900458041225 AT5G18170_at 10.203734227602 10.0844657314408 9.69873605327089 9.7052368976063 10.6932647673871 10.1645832510847 8.30546626413005 8.38596177754657 9.7672332264311 9.0652109794311 9.45679811960457 10.0409061870670 9.48035633042755 9.68508188234587 9.63542976534266 9.8925315479343 8.99996421663085 9.57779101410044 9.54158228547747 0.095322596028114 0.0945842422713624 0.0979666802625646 0.0966424043444684 0.0951889449845559 0.101225636215044 0.0977453959729815 0.0998933321082884 0.102398882854841 0.112160524913602 0.0941579062686764 0.0941932136487141 0.0957440002669023 0.101925486937181 0.0975811393989165 0.0942622489591575 0.0960975851452327 0.104404831365255 0.099338615492971 5 5 + 6007416 6008217 6007871.182 6006041 6008474 + gene protein_coding_gene TRUE TRUE AT5G18170.1 GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase encodes the beta-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 1 (EC 1.4.1.3) (GDH 1) (GDH1) [Arabidopsis Thaliana] (GB:Q43314); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07440.1); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to glutamate dehydrogenase [Nicotiana tabacum] (GB:CAD12373.1); similar to GDHB glutamate dehydrogenase [Vitis vinifera] (GB:ABF57084.1); similar to glutamate dehydrogenase 1 [Glycine max] (GB:CAI53673.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) 0.479323397321247 4.86822084892276 0.00055499894900566 0.00948864183761678 7.98521779370008 19.1822392279477 0.479323397321247 0.0948255724330564 AT5G65930_at 4.98151025544116 5.46931905982848 5.99854384946131 5.50019320884251 7.14915173412635 6.36271931574731 6.281125558897 4.8526046879823 5.57260023543823 4.69844349378653 6.29777648169734 6.96542022194794 5.89628064298077 6.05542280368608 6.24524747276542 6.24743698248489 6.05581977001985 6.49019767346555 5.16951326811772 0.241354929977329 0.239159628148099 0.247130889108378 0.254549232370268 0.238490204847826 0.249260927032519 0.253992139112357 0.242228285529595 0.245950851567799 0.248675391895943 0.245156095975560 0.251583377617859 0.243711585042212 0.2559470606613 0.255043924692635 0.241443164706928 0.250728677026751 0.249514450052248 0.240211211648981 5 5|0 -|/ 26387719 26388563 26388132.111 26387427 26393746 - gene protein_coding_gene TRUE TRUE AT5G65930.1|AT5G65930.2 ZWI (ZWICHEL); calmodulin binding / microtubule motor encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT2G22610.1); similar to kinesin heavy chain-like protein (GB:AAB37756.1); similar to calmodulin-binding protein (GB:AAC37475.1); similar to kinesin-like calmodulin binding protein [Gossypium hirsutum] (GB:AAP41107.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Band 4.1; (InterPro:IPR000299); contains InterPro domain Unconventional myosin/plant kinesin-like protein/non-motor protein conserved region MyTH4; (InterPro:IPR000857); contains InterPro domain FERM; (InterPro:IPR009065) 0.995680030095312 4.86384051190862 0.000558788657296981 0.00954966764218194 7.97841106389244 11.5386722530800 0.995680030095312 0.306920075213556 AT5G46640_at 1.44301546466913 1.23911972779472 2.13750800725322 2.09443170847430 1.69725106132672 1.70680428860986 2.04081060392254 1.65370733062644 1.59365044789051 1.72034132740692 2.28897777453394 2.12377086840709 2.61024295283383 2.43470572943970 2.26904902957417 2.28210596579165 2.20847325617211 1.95096084825948 1.75894477181554 0.205359364550273 0.197966999022276 0.196102547089754 0.209587542650899 0.193975814721539 0.200392420304909 0.193053195039486 0.196876713751496 0.205899650412834 0.201997263950689 0.194102454070394 0.198942149440794 0.193053195039486 0.199228259898675 0.196810581753419 0.195163931428320 0.197045837585632 0.217250657470167 0.198835839757990 5 5 + 18942769 18943459 18943143.091 18941712 18943802 + gene protein_coding_gene TRUE TRUE AT5G46640.1 DNA-binding family protein similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17950.1); similar to putative AT-Hook DNA-binding protein [Oryza sativa] (GB:AAK00433.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 0.447446219375831 4.85774113690802 0.000564111314393384 0.00963683304613772 7.96892839209146 3.73258835016669 0.447446219375831 0.0760986603458705 AT5G37360_at 10.5973449295313 10.5460697810097 11.0893909249449 11.1159577411254 11.5652939594172 11.0745628834333 11.5289562256439 11.2229266209214 10.9500958941941 11.0812727113891 11.7691704572599 11.6617822328035 11.6514488565591 11.6900406142598 11.7059035925444 11.6664867503701 11.5559904025223 11.9408089979493 10.8664152862371 0.0825887943830594 0.0775907811428128 0.079134534931184 0.0773757479835897 0.07751379093599 0.082625648600703 0.085284297850399 0.0778976160265489 0.0810823828164655 0.0781169445839291 0.0769899019627443 0.0758775911161831 0.078207610771332 0.0788343489271676 0.0783291289291998 0.0758775911161831 0.0879170412582119 0.0758775911161831 0.0797937649012222 5 5|0 -|/ 14822682 14823789 14823105.556 14822459 14825466 - gene protein_coding_gene TRUE TRUE AT5G37360.1 similar to Os02g0815400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048502.1) 0.488376506023517 4.85484639962493 0.00056665618252422 0.0096764949215926 7.9644260515874 22.4281288592402 0.488376506023517 0.100581247107042 AT5G15810_at 5.75201437026426 5.6104772659989 6.49747992823059 6.2899718959804 6.31266860093068 6.19244505532877 5.8930980785458 5.94198626639691 4.30739367519069 5.25620064138988 5.34505156473435 5.65655266361473 5.32044992046474 4.89450599383845 5.69869947682197 5.3332025730155 5.18857386163449 4.55564433450389 5.284737604617 0.26254276349438 0.247799999593613 0.255910626926286 0.255340306382372 0.257455912346862 0.268210420700589 0.255056903098193 0.248758986887054 0.253894402702545 0.261015649498389 0.256957580463557 0.247799999593613 0.257160667894217 0.260835555212553 0.261339444859668 0.247963521092324 0.2659037471043 0.258215738251299 0.253753804434684 5 5|0 +|/ 5160229 5160946 5160601.444 5157801 5161361 + gene protein_coding_gene TRUE TRUE AT5G15810.1 N2,N2-dimethylguanosine tRNA methyltransferase family protein Identical to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) [Arabidopsis Thaliana] (GB:Q9LFU5); similar to RNA binding / tRNA (guanine-N2-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G02320.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96899.1); similar to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) (GB:Q9LFU5); similar to hypothetical protein [Cleome spinosa] (GB:ABD96937.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain N2,N2-dimethylguanosine tRNA methyltransferase; (InterPro:IPR002905) 0.411694224831065 4.8518625137396 0.000569292149538125 0.00971768060333306 7.95978377075464 11.1605321938651 0.411694224831065 0.0489276956001157 AT5G05680_at 3.498494880514 3.63692517453073 3.79494552250615 4.34819892647913 4.10028751790133 4.29872880045232 2.977866074847 2.73994235520916 2.67518807697346 2.77672782587666 2.81967814344091 2.69893220491479 2.85672554152491 2.81613773323554 2.85014428419828 2.88359817910519 3.18487547985612 2.76810207641139 2.83293619560747 0.237364228255841 0.237135337296994 0.257436185220875 0.246623373346391 0.249502384494022 0.248058699096557 0.248697175768642 0.245578012946554 0.249892824895404 0.240550738242539 0.238130142920786 0.238249072041143 0.242444593560156 0.261429907615335 0.248588859936712 0.240212785119278 0.239331125828715 0.241090309020988 0.239090038346384 5 0|5 /|+ 1701867 1702431 1702170.778 1698271 1702646 + gene protein_coding_gene TRUE TRUE AT5G05680.1 nuclear pore complex protein-related similar to B0402A04.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67135.1); similar to Os04g0608400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053813.1); similar to OSJNBa0060N03.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE03646.2); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.510194954871436 4.85041125829752 0.000570578878732673 0.0097358117656552 7.9575254607832 6.48511944229919 0.510194954871436 0.112317531588327 AT5G56450_at 3.52731080735673 3.72668676012199 3.71477052559572 3.94983299268805 4.97400946590226 4.20228373520578 3.7488347129331 4.37834954440013 3.78847241737447 3.44557949369699 4.40617113646232 4.46994314830982 4.58432412269854 4.83116780133703 4.83246292447367 4.38236131018359 3.85443714439879 4.10378763789052 3.19194707862021 0.218317631444223 0.2209420326335 0.21975224447543 0.214972452199900 0.217323067425884 0.239893434269348 0.216879999211037 0.234383208730531 0.221795893298697 0.229513337451234 0.214972452199900 0.214972452199900 0.214972452199900 0.215498450498689 0.217595700655874 0.217184025641738 0.219164170964149 0.220750203503473 0.226610998699932 5 5 - 22876087 22876522 22876344.727 22875735 22877288 - gene protein_coding_gene TRUE TRUE AT5G56450.1 mitochondrial substrate carrier family protein similar to AAC1 (ADP/ATP CARRIER 1), binding [Arabidopsis thaliana] (TAIR:AT3G08580.2); similar to Mitochondrial substrate carrier [Medicago truncatula] (GB:ABE94104.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.661338815150179 4.84918754928541 0.000571666250482246 0.00975052835628642 7.95562099838422 7.98196726791706 0.661338815150179 0.180413505036105 AT5G66770_at 1.55079928647359 1.42592886916074 1.72645385462538 1.73097413686444 1.42962262759223 1.92129406116127 1.87619052732401 1.87923185929737 2.05313787995826 2.06227334131503 2.79377075587073 2.55664469872234 2.90261895736737 2.91955805861095 2.49357901715493 2.74407830741556 2.5831198532288 2.37173709867311 1.16259194329135 0.221497686259975 0.22299438664678 0.228493864291351 0.219941497654900 0.219941497654900 0.227105948352483 0.223357827022742 0.225272990402807 0.225535731892326 0.231212698572158 0.223522066410747 0.221788722445954 0.223537895126263 0.226710468834372 0.227011530828304 0.219941497654900 0.236986502757226 0.234813985521262 0.232659248104270 5 5 + 26679104 26679655 26679268.091 26677826 26680120 + gene protein_coding_gene TRUE TRUE AT5G66770.1 scarecrow transcription factor family protein similar to scarecrow-like transcription factor 7 (SCL7) [Arabidopsis thaliana] (TAIR:AT3G50650.1); similar to Os03g0723000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051115.1); similar to GRAS6 [Solanum lycopersicum] (GB:ABD72962.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.465176244844581 4.84749309644428 0.000573175542085947 0.0097724269472012 7.95298355453508 3.90754826859672 0.465176244844581 0.0877923045746855 AT5G48830_at 4.32713967374223 4.53113384032628 4.61912171602239 4.31076054483915 5.11116138663886 4.34454893715079 5.42738995507973 4.91313726382828 4.23664253684831 4.49888600020055 5.61658040104681 6.92400384717204 5.01703624725955 5.97118450976048 6.26703412311028 6.01997548867767 5.58751919310706 4.8196209060677 4.14569180310067 0.220451813555261 0.224311085285084 0.239659917979022 0.222634289583012 0.220959964689001 0.229012481862520 0.220306986086624 0.225840229901478 0.244747605220476 0.226029657436634 0.226834226306487 0.223004280701613 0.222923470790709 0.223806766301557 0.242799744898759 0.224196959984122 0.228161671094926 0.234583582366221 0.225887275578891 5 5 - 19817497 19818190 19817761.364 19817340 19820241 - gene protein_coding_gene TRUE TRUE AT5G48830.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22996.1) 0.640413594530343 4.84241114580169 0.00057772751224423 0.00984616445301557 7.94507089937156 9.73385389115765 0.640413594530343 0.172087241423497 AT5G57180_at 7.32832519795948 7.43919697836238 7.51503946143295 7.71383022131225 7.8524398859301 7.38619429806835 7.21367852476156 7.49820036779171 6.30039514792894 6.61235257067399 6.90020279081284 7.83908508257421 7.24652130205632 7.09347122282466 7.69736485992939 7.9177038356646 7.22188574038592 6.84049588154515 6.92506963621911 0.191218308345062 0.179052880209910 0.188072534604154 0.180361694937275 0.180959613113075 0.1902262464081 0.181862798883886 0.186913521145295 0.190501405650251 0.189392641939269 0.183067463162689 0.190294851767648 0.181791653070952 0.188141115185495 0.186819720564174 0.180591154203221 0.192013841352422 0.186371124040858 0.187997376529764 5 5|0 +|/ 23186322 23187474 23186593.9 23185068 23188225 + gene protein_coding_gene TRUE TRUE AT5G57180.1|AT5G57180.2|AT5G57180.3 CIA2 (CHLOROPLAST IMPORT APPARATUS 2) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast. similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.2); similar to Os02g0148000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045888.1); similar to putative stress resistance-related protein [Oryza sativa (japonica cultivar-group)] (GB:ABF00989.1); contains InterPro domain CCT; (InterPro:IPR010402)|similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to putative stress resistance-related protein [Oryza sativa (japonica cultivar-group)] (GB:ABF00989.1); contains InterPro domain CCT; (InterPro:IPR010402)|similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.2); similar to AT5g57180/MUL3_13 [Medicago truncatula] (GB:ABE84577.1) 0.489505627000294 4.83281947023332 0.000586423486142902 0.00999044219011936 7.9301262809797 14.4719616791598 0.489505627000294 0.102402155669687 AT5G04820_at 5.2247660494916 5.65003386043129 4.29460595686556 4.70996667711661 6.53374515073287 6.20688102885556 5.59924217411353 5.78852743251369 4.76480071441475 4.10486149048891 6.44355857999552 6.27849690888508 5.81406362542123 6.02835630319778 5.78993939496917 5.26008412549936 4.46738934819189 5.30539985734047 4.6035723248043 0.206258310704309 0.206424861624632 0.217159351118293 0.218577672869081 0.209711184984904 0.232961953947375 0.206778827512297 0.207102799548750 0.225078777821169 0.208203073550095 0.206328071754288 0.210473492715363 0.210559552629824 0.217163986416482 0.204003703679850 0.205826591947283 0.225046476510835 0.216727190621902 0.211106426721075 5 5 + 1399871 1400405 1400122.818 1399620 1400785 + gene protein_coding_gene TRUE TRUE AT5G04820.1 ATOFP13/OFP13 (Arabidopsis thaliana ovate family protein 13) similar to ATOFP18/OFP18 (Arabidopsis thaliana ovate family protein 18) [Arabidopsis thaliana] (TAIR:AT3G52540.1); similar to Os11g0156300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065794.1); similar to Os12g0158300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066202.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33158.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) 0.526495082811686 4.82414087004479 0.000594411067810012 0.0101216647756514 7.91659275319248 10.5832156385185 0.526495082811686 0.121883359488117 AT5G57790_at 2.94304900055675 2.56069581188437 3.44643482025803 3.27241103574123 3.86648984131848 3.57735673805538 3.24715792331629 3.01635632451654 3.11254087455814 3.47311783751217 3.76882477431354 3.16345486519586 3.56571773850557 3.40077228710249 3.54644992645174 3.32081514769557 3.54138625896342 3.59919866763083 2.80440707912462 0.199730050581971 0.191727673935100 0.190572623172251 0.190572623172251 0.202971295993012 0.194344758425458 0.208152565400129 0.195382475831916 0.198361482637881 0.190572623172251 0.194006321614908 0.190572623172251 0.200310600083323 0.199044071518346 0.194554029723296 0.198422004310325 0.217325544222625 0.198268901688440 0.191329311128651 5 5 - 23429897 23430546 23430204 23429251 23430853 - gene protein_coding_gene TRUE TRUE AT5G57790.1|AT5G57790.2 unknown protein 0.47858193580443 4.82394469775535 0.000594592945411 0.0101216647756514 7.91628671268454 6.55041863127122 0.47858193580443 0.0968712906625923 AT5G59760_at 0.648935837169101 0.563148097912387 1.18530253231554 1.13289558258396 1.65151942674785 1.59391300603893 1.01062464501976 0.892495629926963 1.39919280959746 1.18540075905614 1.29970733142876 0.802871876451883 1.12784782728725 1.07542765533501 0.437673915049467 1.09933204064366 1.34583486140815 1.99522967549053 0.346021335207556 0.247576721116552 0.242443367081783 0.242443367081783 0.245623038232185 0.246605382126529 0.247884397286782 0.242443367081783 0.246745553388991 0.260118537573593 0.249975521820611 0.242443367081783 0.245379758125462 0.243386334616295 0.242443367081783 0.24600829495651 0.245198515844379 0.247456296441625 0.247017329577851 0.244463080731466 5 5 - 24092931 24093374 24093136.364 24092854 24093641 - gene protein_coding_gene TRUE TRUE AT5G59760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G28690.1); similar to Os05g0115100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054464.1); similar to 4D11_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67518.1); contains InterPro domain Protein of unknown function DUF1635; (InterPro:IPR012862) 0.391612798840485 4.81860505112729 0.000599566187138108 0.0102023178875178 7.90795439398001 2.14728548596792 0.391612798840485 0.0286346584759547 AT5G12010_at 7.85728730063288 8.23552179467628 8.84061633260627 8.8378790923954 9.15231617434206 8.96156568966138 8.40568671085791 8.88676672608176 8.72493580342601 8.35373672361898 9.0728837037803 8.5486341331763 8.74770822607184 9.0843426453612 8.63905625599127 8.82385659502796 8.72557966617665 8.82619920897866 8.1277747027274 0.122456746231369 0.120688883318181 0.129261700599794 0.129255399520556 0.128619741196376 0.128063770776350 0.127350013463014 0.126151237453788 0.122637852030139 0.12388086094939 0.123735471413273 0.126592052034063 0.122267041599904 0.123772880331394 0.126012918028148 0.120966981000392 0.134016263136520 0.123289617290624 0.140894290722765 5 5 - 3877996 3878488 3878285.182 3877813 3879540 - gene protein_coding_gene TRUE TRUE AT5G12010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29780.1); similar to Os01g0582600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043414.1); similar to Os05g0593000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056499.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72250.1) 0.504081083459401 4.81785833329529 0.000600265165873435 0.0102102046811532 7.9067888382204 17.2525457931124 0.504081083459401 0.110929599065504 AT5G13090_at 6.97654310078252 7.09203529668089 7.6403418028177 7.79432039397267 8.42248088941325 8.2786396453797 8.26010733075053 8.45604664033246 8.00495718920793 8.02169060758333 8.42767971367888 8.76625833721383 8.73254495560366 8.60002223381601 8.55528650917738 8.74169037676385 8.3581879049488 8.23694461288811 8.16166307048344 0.147751220279646 0.14628894563997 0.146940421687944 0.137242513348533 0.143770238528624 0.134517404698291 0.138230735140555 0.141407513931851 0.141559963677922 0.140823875660930 0.133915111962331 0.138568881803589 0.135783781932888 0.149124166052183 0.136011216814736 0.135586664826825 0.146631905676477 0.135802594209052 0.130664723460433 5 5 - 4153762 4154266 4154046.909 4153588 4154675 - gene protein_coding_gene TRUE TRUE AT5G13090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24270.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23186.1) 0.413659566089488 4.81411513112189 0.000603782076171735 0.0102626495504237 7.90094483276686 16.1726129473177 0.413659566089488 0.0536554221028808 AT5G64670_at 5.94874752047182 6.31262790968152 6.54417006301277 6.47595329830917 6.36195621247188 6.21493656347164 6.52636454965753 6.75832213853113 5.51296267947576 5.92163167419571 6.53280692893095 7.15093236374659 6.53593975666892 6.08501696856848 7.169678294111 6.65413464410863 6.35493637723675 6.41793285774092 5.74738083015403 0.168961815066833 0.168961815066833 0.171296347671960 0.172179451368097 0.175887682874312 0.175457422476868 0.174646119199583 0.171654458905034 0.191731397866861 0.168961815066833 0.183263275714450 0.172068725398784 0.174269348540545 0.178436674584054 0.171743036245815 0.168961815066833 0.183733683084376 0.170210480979965 0.177183149454614 5 5|0 -|/ 25869768 25870752 25869998.333 25869493 25871215 - gene protein_coding_gene TRUE TRUE AT5G64670.1 ribosomal protein L15 family protein similar to RPL15 (ribosomal protein L15) [Arabidopsis thaliana] (TAIR:AT3G25920.1); similar to Os08g0310100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061512.1); similar to Mitochondrial/chloroplast ribosomal protein L15/L10 (ISS) [Ostreococcus tauri] (GB:CAL57979.1); contains InterPro domain Ribosomal protein L15, bacterial form; (InterPro:IPR005749); contains InterPro domain Ribosomal protein L15; (InterPro:IPR001196) 0.449042858672365 4.81407294393007 0.000603821836995965 0.0102626495504237 7.9008789571855 12.5628834495330 0.449042858672365 0.0797707979013442 AT5G54910_at 3.53648015804 3.59495105067877 4.17699018369428 4.31688734444208 4.12268504021435 3.84724890849580 3.93192605429297 3.7287852237183 2.91215779722203 3.15164958167581 3.52651724716406 3.77873772737752 3.25848279111753 3.22707082195919 3.45058507012583 3.76624863442859 3.27388150678515 3.31627940095484 2.97693388828820 0.21563910035684 0.211041501762348 0.210134437629217 0.204022526810172 0.201149038880321 0.210669611427309 0.205726949854677 0.208700679204234 0.209989393699878 0.208555526173035 0.207034686517876 0.201149038880321 0.211074491110989 0.209180072502985 0.201149038880321 0.201149038880321 0.214862216748045 0.206433780683923 0.210467595914227 5 5|0 -|/ 22315896 22316658 22316289.889 22315783 22318945 - gene protein_coding_gene TRUE TRUE AT5G54910.1 DEAD/DEAH box helicase, putative Identical to Probable DEAD-box ATP-dependent RNA helicase 32 (EC 3.6.1.-) (RH32) [Arabidopsis Thaliana] (GB:Q9FFT9); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT5G65900.1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAC83715.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.427031112561431 4.81014396932939 0.000607537010422083 0.0103217470567117 7.89474270377935 7.13864715663929 0.427031112561431 0.0647791759114837 AT5G17310_at 7.93979797149696 7.87053456445286 9.25583686553047 9.01019965300454 8.63661889619443 8.55656782085386 9.61284737223112 9.50192560702786 8.17123703724983 8.90082055053498 9.06960557528886 9.23198372910214 9.30035668511028 9.0705833501934 8.66177032204102 9.65963494628352 9.83286882098157 9.06215363858684 8.58338977849355 0.105471155051827 0.102553982208913 0.106607875243447 0.105608947868272 0.103773784475488 0.102977395252596 0.107487912705312 0.103745757761875 0.123514001287093 0.105322876351959 0.106558538173173 0.102260159366159 0.104918879338189 0.107867403765079 0.108101271881613 0.102747276455726 0.107533172711298 0.107530093717714 0.103973224444149 5 0|5 /|- 5697083 5697572 5697311.25 5696647 5700924 - gene protein_coding_gene TRUE TRUE AT5G17310.1|AT5G17310.2 UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative Identical to UTP--glucose-1-phosphate uridylyltransferase 1 (EC 2.7.7.9) (UDP- glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) [Arabidopsis Thaliana] (GB:P57751;GB:Q3E9G5); similar to UGP (UDP-glucose pyrophosphorylase), UTP:glucose-1-phosphate uridylyltransferase [Arabidopsis thaliana] (TAIR:AT3G03250.1); similar to UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] (GB:ABB88893.1); similar to UDP-glucose pyrophosphorylase [Cucumis melo] (GB:ABD98820.1); similar to UDP-glucose pyrophosphorylase [Bambusa oldhamii] (GB:AAO48422.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618)|Identical to UTP--glucose-1-phosphate uridylyltransferase 1 (EC 2.7.7.9) (UDP- glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) [Arabidopsis Thaliana] (GB:P57751;GB:Q3E9G5); similar to UGP (UDP-glucose pyrophosphorylase), UTP:glucose-1-phosphate uridylyltransferase [Arabidopsis thaliana] (TAIR:AT3G03250.1); similar to UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] (GB:ABB88893.1); similar to UDP-glucose pyrophosphorylase [Amorpha fruticosa] (GB:AAL33919.1); similar to UDP-glucose pyrophosphorylase [Cucumis melo] (GB:ABD98820.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618) 0.408916637391314 4.80437881763696 0.00061303228480167 0.0104110294368229 7.88573466043043 17.6920088049530 0.408916637391314 0.0501102698770597 AT5G15850_at 8.239329418368 8.11848863478719 9.6016157194996 9.4023965851773 9.47588064682763 9.60996410402464 9.12097410915998 9.09760942013224 9.06727436204161 9.09327109222315 8.75966122880256 8.48070384659063 8.97268456417968 8.86211462191774 8.47926135070601 9.51093999205442 9.73342977594383 9.04907307116091 8.98573759400836 0.088571824464565 0.0876996801493593 0.0837053727101225 0.0873185916680854 0.0866143577381017 0.0874979131274977 0.086480207071968 0.0852038222764834 0.094666042091083 0.0861400734182416 0.0872956358225143 0.0822961776848832 0.0869886747474022 0.0856700212945342 0.0849046281650352 0.0853797846344472 0.091146436466456 0.0864027347766118 0.087805061649953 5 5|0 -|/ 5176347 5176975 5176666 5176094 5177900 - gene protein_coding_gene TRUE TRUE AT5G15850.1 COL1 (CONSTANS-LIKE 1); transcription factor/ zinc ion binding Homologous to the flowering-time gene CONSTANS. Identical to Zinc finger protein CONSTANS-LIKE 1 (COL1) [Arabidopsis Thaliana] (GB:O50055); similar to CO (CONSTANS), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15840.1); similar to COL1 protein [Brassica nigra] (GB:AAN09808.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.405293204299434 4.80339424328827 0.000613976014849757 0.0104229740158982 7.88419578187781 18.0981546160023 0.405293204299434 0.0466975242307442 AT5G66420_at 5.97798125204101 5.99759030251008 5.10078916809139 4.9174796177278 5.96940614972606 5.38438363047516 6.13171118568888 5.9551057553393 5.90811560159239 6.51794575333928 8.2099359057905 8.4583777998241 7.57557589463924 8.09223208322646 8.5637298940435 7.74651797765254 7.2350083919402 7.84084645050658 6.4487716598281 0.213002995349883 0.215389201270772 0.217884193804394 0.217919914651788 0.214848650023995 0.229051754374928 0.213002995349883 0.215545232700207 0.216343529793174 0.213002995349883 0.215321714513286 0.236770630066927 0.222578559412549 0.233562462539236 0.22523197074894 0.213002995349883 0.226827855048432 0.221510444271514 0.215629232923623 5 5|0 -|/ 26539194 26539838 26539596.2 26538900 26542307 - gene protein_coding_gene TRUE TRUE AT5G66420.1|AT5G66420.2 similar to hypothetical protein [Thellun (GB:ABB45848.1); similar to Os06g0472400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057623.1); contains InterPro domain Protein of unknown function UPF0261; (InterPro:IPR010647) 0.500542281196626 4.79263013795499 0.000624394412831874 0.0105956900637074 7.867362440364 12.8077504100114 0.500542281196626 0.110460906074723 AT5G15230_at 9.15439058522332 9.10455984988417 7.89880342474604 7.94312712103848 8.45562409926801 8.4109652198957 8.76221201945164 8.85945115006128 7.29681592388132 8.37203897670429 10.0895246061394 10.2374951349843 8.96355533533591 9.38669755765866 10.3795109417242 8.98230247782856 8.18341710907566 9.71651111255726 8.11769709633323 0.144513280170802 0.137972670687891 0.157551732703306 0.156192588848387 0.141660147989269 0.148900505998373 0.143119397724613 0.139720402543406 0.157367740097704 0.146346584425281 0.137198020268154 0.137198020268154 0.151862212764402 0.142721150556355 0.144074851428295 0.140550045579281 0.167190915623956 0.149872505074838 0.140753728902144 5 5|0 +|/ 4945030 4945972 4945736.25 4944903 4946219 + gene protein_coding_gene TRUE TRUE AT5G15230.1|AT5G15230.2 GASA4 (GAST1 PROTEIN HOMOLOG 4) gibberellin-regulated (GASA4) Identical to Gibberellin-regulated protein 4 precursor (GASA4) [Arabidopsis Thaliana] (GB:P46690;GB:O49593); similar to gibberellin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G74670.1); similar to (GB:AAA74480.1); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854) 0.385251341927672 4.78767585869457 0.000629252269144202 0.0106739480121525 7.85960909956606 17.2842554087224 0.385251341927672 0.0218196858423092 AT5G20810_at 2.66169454937317 2.35469611026019 3.23032838748197 2.84272687541019 2.97610899454718 3.03260036908632 2.64802843488388 2.49441552549483 2.51911428470146 2.71890997846204 2.97011377023279 2.79024247873424 3.01310596474818 2.70605502552080 3.11795039613059 3.10688571591521 3.41256110210814 2.99548860178948 2.46677690697425 0.224933547026175 0.238062219322376 0.246094083358503 0.237155572142488 0.226508544440919 0.242391420934945 0.224933547026175 0.233393374458609 0.228773719409210 0.229447307935175 0.229286775935606 0.226089404948429 0.229711896356487 0.229901530340935 0.224933547026175 0.224933547026175 0.229046824483645 0.233058576373466 0.236107711411820 5 5 + 7044881 7045319 7045100.182 7043900 7045714 + gene protein_coding_gene TRUE TRUE AT5G20810.1|AT5G20810.2 auxin-responsive protein, putative / small auxin up RNA (SAUR_B)|calmodulin binding similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G43120.1); similar to auxin-regulated protein [Phaseolus vulgaris] (GB:AAN65371.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.463257913406621 4.7867516162216 0.000630162939642584 0.010685215187419 7.85816228683954 5.57123362512222 0.463257913406621 0.0901332710277179 AT5G67510_at 8.35112420988752 8.37673758676229 8.82817833595343 8.75051359285089 8.4657965863193 8.2464502577839 7.93236342741066 8.2048301370662 8.05335061663937 7.47405663925769 8.35892643947317 8.79297970232077 8.15944717768814 8.23787799044293 8.88764774028031 8.09600938073515 8.09059118659562 8.22122342997184 8.0844151141245 0.107871500088835 0.111861528786884 0.113961840712022 0.113144101502378 0.109091141692510 0.105867573294548 0.113943887084718 0.112172161639563 0.110818649600830 0.119221401166738 0.111173552319716 0.110921691403924 0.110961411615976 0.111208771777657 0.107951225646074 0.108982448363407 0.119692282207809 0.111506719441322 0.111329125790151 5 5 - 26955256 26955611 26955434.909 26955039 26955677 - gene protein_coding_gene TRUE TRUE AT5G67510.1 60S ribosomal protein L26 (RPL26B) Identical to 60S ribosomal protein L26-2 (RPL26B) [Arabidopsis Thaliana] (GB:Q9FJX2); similar to 60S ribosomal protein L26 (RPL26A) [Arabidopsis thaliana] (TAIR:AT3G49910.1); similar to Ribosomal protein L24/L26 [Medicago truncatula] (GB:ABE77438.1); contains InterPro domain Ribosomal protein L24/L26; (InterPro:IPR005825); contains InterPro domain Ribosomal protein L26, eukaryotic and archaeal form; (InterPro:IPR005756); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain KOW; (InterPro:IPR005824) 0.420725638604924 4.77729793350574 0.000639558254489178 0.0108402852615315 7.84335636385993 16.5075969355604 0.420725638604924 0.0621646406216293 AT5G26850_at 5.8883102068386 5.62414305334987 4.77548851961342 4.43490955297694 5.11760245785234 5.41446091156364 3.48022241903376 4.35876808531326 4.54587190902585 4.31183501292911 6.11590666422909 6.80214088951392 5.43194485977163 5.95917311868071 7.11129835049914 5.75963838812485 4.66948319808013 5.68144586439479 5.40332611739928 0.202705464416323 0.203515763495272 0.202553488142806 0.209988883660714 0.204885956080809 0.209273326833678 0.205921030272309 0.204030912553489 0.210353154346303 0.203116984964396 0.201066665709017 0.209293983229955 0.202273175525135 0.199256027126815 0.201714761370457 0.200884565201814 0.206520826379461 0.202583043147941 0.205839954628256 5 5|0 +|/ 9449437 9450217 9449947.444 9445443 9450822 + gene protein_coding_gene TRUE TRUE AT5G26850.1|AT5G26850.2|AT5G26850.3 similar to cyclin-related [Arabidopsis thaliana] (TAIR:AT2G41830.1); similar to Os03g0308200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049903.1); similar to cyclin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95548.1); contains domain ARM repeat (SSF48371); contains domain UNCHARACTERIZED (PTHR12444) 0.642727828122375 4.77281705968776 0.000644063107147115 0.0109123749348387 7.83633411608394 10.234266449041 0.642727828122375 0.176968659595322 AT5G61830_at 6.48466885682197 6.32247870336978 6.36410139893326 6.45273927093447 7.58908911466993 6.95930177485597 6.58113569900185 6.7897515869264 6.03504476842474 5.76365870330356 6.7229743570397 7.23501015908387 6.54798574118278 7.18383681983988 6.48618497105333 6.86167750050217 5.86623947823735 6.5134719176218 6.03481533443877 0.206286026295651 0.207724795989129 0.206808646217832 0.202936040860522 0.199896132921513 0.209194795739348 0.210888547093943 0.196858887724831 0.213329735311343 0.203414726758675 0.198995397558874 0.20306003787656 0.196491753197317 0.204009499947788 0.198460393511769 0.196491753197317 0.214822004129932 0.205507898498983 0.196491753197317 5 5 + 24855360 24855945 24855703.545 24854528 24856196 + gene protein_coding_gene TRUE TRUE AT5G61830.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G51030.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE80213.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.51473276383308 4.76584381002697 0.000651140539425048 0.0110279785330760 7.82540015449981 13.0037477440854 0.51473276383308 0.119183665420898 AT5G65050_at 4.99069109131787 4.83635472570022 4.96486800129081 5.40262269194196 5.64456921241816 5.42408463786365 4.76954635446366 5.10438163228567 4.89830778564741 4.80110001487711 5.44517745698355 5.44233616334404 5.37086736264879 5.16169649867076 5.4147617428043 5.62948938507844 5.32184736876545 5.10334561555034 4.74910722080308 0.138748504514169 0.148881513137194 0.151015705786192 0.138890315983993 0.148419535087664 0.146937685937967 0.139675653542495 0.14713329958716 0.148629595115403 0.142935717378344 0.138748504514169 0.144078246527690 0.143654053380007 0.142948795022990 0.140409941994121 0.142631052808203 0.138748504514169 0.138748504514169 0.147419995008898 5 0 / Inf -Inf NA 25999480 26003552 + gene protein_coding_gene TRUE FALSE AT5G65050.1|AT5G65050.2 AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31); transcription factor|AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31) Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. Identical to Agamous-like MADS-box protein AGL31 (Protein MADS AFFECTING FLOWERING 2) (AGL31) [Arabidopsis Thaliana] (GB:Q9FPN7;GB:Q84NB5;GB:Q9FGD9); similar to MAF3 (MADS AFFECTING FLOWERING 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65060.1); similar to 80C09_24 [Brassica rapa subsp. pekinensis] (GB:AAZ41835.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.489405605195816 4.76389651283561 0.000653131585186863 0.0110530644797050 7.82234556675995 10.2308207299135 0.489405605195816 0.106140083206728 AT5G65060_at 4.99069109131787 4.83635472570022 4.96486800129081 5.40262269194196 5.64456921241816 5.42408463786365 4.76954635446366 5.10438163228567 4.89830778564741 4.80110001487711 5.44517745698355 5.44233616334404 5.37086736264879 5.16169649867076 5.4147617428043 5.62948938507844 5.32184736876545 5.10334561555034 4.74910722080308 0.138748504514169 0.148881513137194 0.151015705786192 0.138890315983993 0.148419535087664 0.146937685937967 0.139675653542495 0.14713329958716 0.148629595115403 0.142935717378344 0.138748504514169 0.144078246527690 0.143654053380007 0.142948795022990 0.140409941994121 0.142631052808203 0.138748504514169 0.138748504514169 0.147419995008898 5 0 / Inf -Inf NA 26004655 26008541 + gene protein_coding_gene TRUE FALSE AT5G65060.1|AT5G65060.2 MAF3 (MADS AFFECTING FLOWERING 3); transcription factor MADS domain protein - flowering regulator that is closely related to FLC similar to MAF1 (MADS AFFECTING FLOWERING 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77080.4); similar to 80C09_24 [Brassica rapa subsp. pekinensis] (GB:AAZ41835.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.489405605195816 4.76389651283561 0.000653131585186863 0.0110530644797050 7.82234556675995 10.2308207299135 0.489405605195816 0.106140083206728 AT5G13260_at 7.29801603625624 7.61907844256946 7.53681347461981 7.7065481926043 7.73366324781144 7.24897166148466 7.11812583345152 7.31204168731881 7.87399507079335 7.59178905516543 8.75198621959702 9.11478777361008 8.14956772367317 8.66327531205519 8.66657945752663 8.47679034021496 7.1572844947855 8.64448620278238 7.57401020682677 0.225779905315893 0.220974722400228 0.219564022201874 0.216067342570306 0.216067342570306 0.236224624919032 0.235647781465228 0.230169271211026 0.23558919410520 0.220937699653991 0.217231515215423 0.222861237778123 0.224375761727528 0.221759312863508 0.219376579242406 0.224860933379713 0.249017759024723 0.232581718543329 0.216375566741459 5 5 + 4245519 4246647 4246160.75 4243031 4246881 + gene protein_coding_gene TRUE TRUE AT5G13260.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48860.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93965.1); similar to Os01g0928100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045273.1) 0.496423445249908 4.76062899222004 0.00065648699219987 0.0111032094732590 7.81721881049652 15.5131703894108 0.496423445249908 0.110052457992941 AT5G39860_at 6.56079561315231 6.65025144239861 6.01880955638502 6.12776477790594 6.83915307406335 7.15405316267265 6.49419992261843 7.50485253490851 7.68584182734901 7.40630204136368 9.86610336370266 10.1609882750135 9.99572088270826 9.23051804504739 10.2663415105896 9.81968012667444 8.49746119059174 8.84340004314015 8.90479252119353 0.213625208032285 0.223196850939638 0.218346265359835 0.227376774449245 0.218422087637723 0.219188645773819 0.217550982134317 0.221495730599869 0.226586703997814 0.218272740880689 0.219923492185528 0.223591368942457 0.226215958483523 0.222722409444578 0.217065051433136 0.217351206378331 0.214970276647867 0.213625208032285 0.213625208032285 5 5|0 +|/ 15974934 15975499 15975207.5 15974645 15975683 + gene protein_coding_gene TRUE TRUE AT5G39860.1 PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G28857.1); similar to Os03g0171300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049112.1); similar to hypothetical protein LOC_Os10g26460 [Oryza sativa (japonica cultivar-group)] (GB:ABB47567.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.659234073767667 4.75678124340099 0.000660461617003359 0.0111640392943416 7.81117970264006 15.4607377486725 0.659234073767667 0.184808636059708 AT5G56780_at 2.85489889290225 2.45851112841928 2.56339714378149 2.64500242837489 3.37217763802569 3.17586810937778 2.77051007891075 2.55679187111010 3.09663150452727 2.39707561336306 3.79864974212394 3.67335561506790 3.22343656968322 3.54248484340967 3.77753640525590 3.43419471384386 2.63427421521149 3.00291978844594 2.77896866475977 0.241785919775393 0.240604592221175 0.242604251394088 0.236936937641139 0.240615595725117 0.254541270916163 0.237492858570801 0.238226089600319 0.248056911206064 0.235389384454797 0.239117734224315 0.23668251232667 0.234244309588631 0.244305298875280 0.234479228824635 0.240593089633488 0.244357094161776 0.235768030433998 0.233199009403679 5 5 - 22981726 22982127 22981934.909 22981491 22983467 - gene protein_coding_gene TRUE TRUE AT5G56780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56770.1); similar to transcripteion factor [Vicia faba var. minor] (GB:CAA66483.1) 0.453615614733954 4.75447980553208 0.000662851095789503 0.0112000630862203 7.80756653832057 5.87135220178625 0.453615614733954 0.0861797605816548 AT5G57840_at 2.4552206887133 2.22758640865514 3.04143610695223 2.90435524371882 3.05643441002598 2.99677926853285 2.56880660407646 2.42333414834553 2.27306663518393 2.71333398425402 2.70908830309689 2.46234330994684 2.2206776856296 3.19101217724293 2.24719095620193 2.87940817226416 2.88699265064823 3.00923715249948 2.40974985152965 0.20324334989758 0.199762894176593 0.207845836410660 0.212492476230620 0.198667922542065 0.218044612109174 0.205055022388505 0.193122214651668 0.199787323576140 0.205856923955028 0.197787934629307 0.203624167147968 0.202376586598569 0.200404462776477 0.203011379328264 0.197983819505103 0.200170590547894 0.203422512156232 0.204488696953334 5 5 - 23450176 23450869 23450511.182 23450030 23452458 - gene protein_coding_gene TRUE TRUE AT5G57840.1 transferase family protein encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G48930.1); similar to N-hydroxycinnamoyl/benzoyltransferase [Ipomoea batatas] (GB:BAA87043.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.408187302739294 4.75334922053509 0.000664028277227555 0.0112155828438844 7.80579128662188 5.29230775550943 0.408187302739294 0.0534314506264442 AT5G22340_at 7.64408061603672 7.64428294618572 7.70534425027062 7.45980656292163 8.23434052680119 8.07410107594189 8.14320276117128 8.00197270005456 8.096530463329 8.11083453050785 8.96850617217994 9.35781481242537 8.55268546429948 8.73251948485769 9.47188197717033 8.81496190930995 8.53579952931217 8.61924160911122 7.9997008667635 0.110936342871093 0.101713056964879 0.104112683173049 0.105819063660001 0.103028311709799 0.103616440124507 0.105392298402978 0.104709855668788 0.111453227950503 0.110944444879798 0.110117510115203 0.111481345152402 0.107962513505677 0.102049173956333 0.109531584565027 0.101882424100531 0.105107733655340 0.103170554447654 0.109931795510375 5 5|0 +|/ 7395295 7396522 7396025.444 7394447 7396878 + gene protein_coding_gene TRUE TRUE AT5G22340.1|AT5G22340.2 similar to Os03g0322600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049968.1) 0.411333882210789 4.75154953138722 0.000665906701192615 0.0112429300419683 7.80296502428704 16.3387405916063 0.411333882210789 0.0563189669598807 AT5G06100_at 2.67592941479715 2.65323242428024 3.83845264161484 3.48420889148345 5.16316046553786 3.35944587620326 3.24665184937277 2.52673721754818 2.47459491564787 2.40337419535246 3.71409319084441 3.11410352048201 3.90028473887909 3.44925368277014 3.56649749894898 3.7262459975072 3.27752124687723 3.70640003919029 2.95016498794287 0.215363636544427 0.216055984203937 0.216261738211066 0.217241803600549 0.225438121385441 0.223318220434946 0.215991786445039 0.217685166156788 0.225241428788539 0.226514476341140 0.220676742683449 0.215363636544427 0.215363636544427 0.218498203609721 0.216685729264099 0.220575258418806 0.224961601526824 0.224515485985425 0.225215817144030 5 5 + 1839404 1839961 1839659.727 1837908 1840728 + gene protein_coding_gene TRUE TRUE AT5G06100.1|AT5G06100.2|AT5G06100.3 ATMYB33/MYB33 (myb domain protein 33); DNA binding / transcription factor|ATMYB33/MYB33 (myb domain protein 33) Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. When the target site is mutated , expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. similar to ATMYB65 (myb domain protein 65), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G11440.1); similar to transcription factor GAMyb [Hordeum vulgare] (GB:AAG22863.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to ATMYB65 (myb domain protein 65), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G11440.1); similar to Os01g0812000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044592.1); similar to transcription factor GAMyb [Oryza sativa (indica cultivar-group)] (GB:CAA67000.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.06655059933331 4.74972817804475 0.000667813457651247 0.0112707341193643 7.80010426619882 6.45156635881396 1.06655059933331 0.341653350699465 AT5G56200_at 2.20509584723919 2.32252823083721 2.66049045597088 2.69709707846301 2.42336002069261 2.70838708084586 1.80518926185896 1.78387818371164 1.86181597196501 2.09947136589291 2.1250919845534 2.51385119239376 1.98340832226236 2.18536837216991 2.17453020536764 2.22739948503003 2.39220939074422 2.04380790935670 1.98691445600250 0.22837588414864 0.222072415444902 0.230607598780309 0.232964665802750 0.233566843921971 0.225436212509723 0.223219793172094 0.235839752542379 0.225886109984207 0.224465749009124 0.233812541041623 0.223205742868572 0.230291270350735 0.230305342045148 0.224540403086088 0.224738933420863 0.221226355909238 0.222965998626712 0.227651677343200 5 5 + 22765924 22766431 22766162.545 22764994 22766475 + gene protein_coding_gene TRUE TRUE AT5G56200.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G26940.1); similar to tapetum-specific zinc finger protein 1 [Petunia x hybrida] (GB:BAA19113.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.408067602264643 4.74650943977062 0.000671197249315787 0.0113234348855083 7.79504750224168 4.4199744144632 0.408067602264643 0.0538489269104149 AT5G50110_at 5.5366354435525 5.58519254178766 6.15698252098017 6.07317352246671 6.59557654482215 6.63352553138344 6.28536484738144 6.4338471088743 6.2681433212478 6.7462825099906 6.92927260402 6.69233948418261 6.8971638049221 7.0724326226751 6.36788252541365 6.70496999047138 7.06787984365324 6.355460235451 6.15807963230456 0.189629625593380 0.191378763100575 0.194174726974808 0.191913634392556 0.185271532660551 0.188435704717962 0.191296669744277 0.197656649700740 0.200837472582163 0.187683190256743 0.185271532660551 0.187798882903285 0.189072710425341 0.191096662365008 0.190586923375927 0.186408218520643 0.197477141630449 0.191490406114150 0.191636833075239 5 5|0 +|/ 20391480 20393269 20392735.333 20390794 20393433 + gene protein_coding_gene TRUE TRUE AT5G50110.1 methyltransferase-related similar to Glucose inhibited division protein [Medicago truncatula] (GB:ABE82388.1); contains InterPro domain Glucose inhibited division protein; (InterPro:IPR003682) 0.387322264424227 4.74354566891032 0.000674329029621272 0.0113718447507263 7.79038998656409 12.7384174043375 0.387322264424227 0.0313744084924739 AT5G04230_at 5.68165462002304 5.9075508043795 4.66279217531137 5.49336775657803 6.7269830628286 6.57246584530219 6.04363776349735 6.07319385958014 3.71997847442711 4.76906751353606 5.37369370341703 5.85474449793002 5.4359157530888 5.63084254845924 5.06694972147065 6.04516514124231 5.88769281104847 4.99336698388482 4.45416592995162 0.234471934646022 0.228512696496244 0.228610623278199 0.230577911471661 0.227689737889872 0.23623664654591 0.226692780040587 0.232915035906314 0.245540065618686 0.225957320552160 0.225957320552160 0.225957320552160 0.22934075963305 0.229917884488386 0.227698826296341 0.22690040198632 0.231229990420756 0.235357810142601 0.226430778724135 5 5 + 1163140 1163678 1163359.182 1160832 1163776 + gene protein_coding_gene TRUE TRUE AT5G04230.1 PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase Member of Phenylalanine ammonialyase (PAL) gene family.Differs significantly from PAL1 and PAL2 and other sequenced plant PAL genes Identical to Phenylalanine ammonia-lyase 3 (EC 4.3.1.5) (PAL3) [Arabidopsis Thaliana] (GB:P45725;GB:Q53YP2;GB:Q9FYD8); similar to PAL2 (phenylalanine ammonia-lyase 2), phenylalanine ammonia-lyase [Arabidopsis thaliana] (TAIR:AT3G53260.1); similar to PAL1 (PHE AMMONIA LYASE 1), phenylalanine ammonia-lyase [Arabidopsis thaliana] (TAIR:AT2G37040.1); similar to phenylalanine ammonia-lyase, putative [Arabidopsis thaliana] (TAIR:AT3G10340.1); similar to phenylalanine ammonia lyase [Populus balsamifera subsp. trichocarpa x Populus deltoides] (GB:AAQ74878.1); similar to phenylalanine ammonia-lyase 1 [Manihot esculenta] (GB:AAK62030.1); similar to phenylalanine ammonia lyase [Jatropha curcas] (GB:ABI33979.1); contains InterPro domain Phenylalanine ammonia-lyase; (InterPro:IPR005922); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Phenylalanine/histidine ammonia-lyase; (InterPro:IPR001106) 0.579517685282219 4.7375630440195 0.000680697951939429 0.011474786717944 7.78098455327004 10.8204309197905 0.579517685282219 0.15142372237296 AT5G38720_at 3.92908349964790 4.33573046483529 4.763581420575 4.96412905398452 4.55114814478657 4.4296057109688 4.17234257172503 4.42634308388172 3.08509403603531 3.56590062982191 3.73399334515474 4.25919718668561 3.68804280074765 3.49743925236419 4.06424142619959 4.26281882795295 3.79319794784402 3.89036302996142 3.65953256920952 0.181960409760334 0.181213924750885 0.185564889569924 0.193602465477159 0.183759027445976 0.203693900767262 0.185497114474532 0.180595356342258 0.186199233461868 0.178996770962105 0.186320894621219 0.181867480648239 0.178996770962105 0.184957664315046 0.182340942744020 0.178996770962105 0.196765516734093 0.188341620214624 0.187785656283265 5 5|0 -|/ 15525649 15526250 15525983.8 15525474 15527789 - gene protein_coding_gene TRUE TRUE AT5G38720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79302.1); contains domain RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED (PTHR13191) 0.461530246490544 4.73018178787227 0.000688643549011379 0.0116042169499339 7.7693732278987 8.11424756320195 0.461530246490544 0.0923648253022961 AT5G13530_at 1.95631058554608 1.66735923078856 2.33152785581086 1.89320082013164 2.13898169951057 2.22248521378874 1.77923796655226 1.44602592925449 1.57435614275222 1.18211768421932 1.72657979561623 1.92135845423957 2.18133346447696 2.01572133538989 1.59852198610366 1.47106206403719 2.17560621350416 1.95654840509771 1.24857421061820 0.197510987078329 0.204981736245703 0.201172559714339 0.200818505138646 0.210473546232721 0.194542898203045 0.200517880495379 0.194542898203045 0.212335204368406 0.202224183781925 0.210186308850778 0.200366046997382 0.200768676108995 0.205842811657014 0.196016387918868 0.194653959197160 0.205452694465908 0.205250412681175 0.201671087705547 5 0|5 /|+ 4349339 4351125 4350060.4 4345621 4351150 + gene protein_coding_gene TRUE TRUE AT5G13530.1 KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase Stone et al. (Plant Cell, 2007, PubMed ID 17194765) suggested that this locus is misannotated, with a full open reading frame ORF likely encompassing both the At5g13530 and At5g13540 loci. The misannotation will be corrected with the next Arabidopsis genome release (TAIR8). At5g13530 and At5g13540 together encode KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. similar to kinase [Arabidopsis thaliana] (TAIR:AT4G32250.3); similar to Protein kinase; Zinc finger, RING-type [Medicago truncatula] (GB:ABE84394.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.490070460776682 4.72633770791136 0.00069282029531811 0.0116700630153618 7.76332308375911 3.53731990134194 0.490070460776682 0.108573918808960 AT5G49630_at 10.2273863127033 10.3922391325618 10.7753922426120 10.9179508486068 10.7105698102140 10.1456635875816 10.7633252636520 10.8814328941625 9.75377442220196 9.98920428508612 11.0097877870260 10.4116898693170 11.0352909809537 10.7924744405522 10.1391286989899 10.6487873396028 10.7774436189285 10.9209874797884 9.70294738478346 0.0974783705610534 0.097976807707541 0.104742171105176 0.102421548560198 0.0987790577571868 0.102631798664339 0.0981883736106872 0.101767732213372 0.116945193051100 0.105201111974633 0.101243748196699 0.097787064022598 0.0998986506822315 0.108357664858285 0.0998103375007699 0.102437366223172 0.101318667479396 0.101514621805349 0.113096028453872 5 5 - 20159948 20160464 20160203.091 20159696 20163724 - gene protein_coding_gene TRUE TRUE AT5G49630.1 AAP6 (AMINO ACID PERMEASE 6); amino acid permease Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. similar to AAP1 (AMINO ACID PERMEASE 1), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G58360.1); similar to AAP8 (amino acid permease 8), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G10010.1); similar to amino acid permease 1 [Brassica napus] (GB:CAD92449.1); similar to amino acid permease 6 [Brassica napus] (GB:CAD92450.1); similar to amino acid transporter [Solanum tuberosum] (GB:CAA70968.2); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.486469150510648 4.72419994743491 0.00069515463411801 0.0117048359517883 7.75995757757773 20.8678737486377 0.486469150510648 0.10675773784881 AT5G59070_at 2.51416119877842 3.23388511588286 3.36167679529268 3.58386146293482 3.04073642759576 2.84964763914829 1.37609132874268 1.71261676950474 2.9474804323562 1.62764217435525 2.11331460542665 2.75348275421459 1.57048372465691 2.49171957827283 2.20210172570846 2.22191908370806 1.57827928818862 2.97640338160303 1.73706742885084 0.223130860646944 0.219524010475267 0.232779794775020 0.218848290037974 0.225544403926717 0.225460937512365 0.222088949023254 0.227271130270283 0.217255472824478 0.223635631905541 0.217255472824478 0.222752277607344 0.221148266038626 0.220541722623666 0.221094436326907 0.217255472824478 0.225741869685346 0.223673761062891 0.223824322448739 5 5 + 23864030 23864506 23864267.364 23862424 23864619 + gene protein_coding_gene TRUE TRUE AT5G59070.1 glycosyl transferase family 1 protein similar to glycosyl transferase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G19460.1); similar to glycosyltransferase family-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10154.1); similar to Os01g0653200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043742.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.567095825275337 4.7234941247575 0.000695927184948064 0.0117132951126232 7.75884624758863 4.88034777368994 0.567095825275337 0.146549085815458 AT5G50310_at 5.80815841928939 6.10323733596304 5.95049537760859 6.43183673721618 6.81719331188441 6.55042953017605 6.0619173765484 6.03466384662077 5.44351076581063 5.87160124502457 6.2295388210133 6.66904117946523 6.15155998903193 6.06799315466009 6.62935911683323 6.18180347186443 6.4456790578589 5.92498917189759 5.92016982982322 0.1676078604801 0.168300454934296 0.170933327418610 0.164515455409844 0.163360891761887 0.166366332860742 0.169953697142822 0.174153185925992 0.175697658196041 0.166648602219318 0.171201843288559 0.163066481280767 0.170950859172361 0.170367644095956 0.170010830269423 0.163066481280767 0.163703306620646 0.171598645365026 0.165238492366899 5 5|0 +|/ 20495427 20496279 20495929.714 20491713 20496681 + gene protein_coding_gene TRUE TRUE AT5G50310.1 kelch repeat-containing protein similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07720.1); similar to Os04g0483600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053126.1); similar to H0805A05.4 [Oryza sativa (indica cultivar-group)] (GB:CAH67474.1); similar to OSJNBa0081L15.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE03144.2); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.488948021528928 4.72287849597583 0.000696601755815449 0.0117200992271547 7.75787687129844 12.2360362130205 0.488948021528928 0.108164943598393 AT5G40950_at 10.0258919612796 10.3128092985875 10.2532976641546 10.3216560511658 10.5296057502630 10.1975928251602 10.769491831548 10.8814413378908 10.1430431900912 10.7197589778006 11.5386877967230 11.9068531712211 11.1489151664306 11.4175924860455 11.7463142618832 11.5204780338006 11.0416204626937 11.2683761752129 10.3343311899832 0.146613027316473 0.138064368385347 0.159069988505800 0.144981234047982 0.144360381416471 0.151458159463453 0.146919182094157 0.147056906310380 0.162685831069328 0.138064368385347 0.143208233655860 0.145916412058566 0.142818377964045 0.146354798281081 0.147135988600094 0.139481547789884 0.155468489726950 0.144190424070072 0.146422540898807 5 5|0 +|/ 16428137 16429024 16428524.6 16428010 16429291 + gene protein_coding_gene TRUE TRUE AT5G40950.1 50S ribosomal protein L27, chloroplast, putative (RPL27) Identical to 50S ribosomal protein L27, chloroplast precursor (CL27) (RPL27) [Arabidopsis Thaliana] (GB:Q9FLN4); similar to ribosomal protein L27 family protein [Arabidopsis thaliana] (TAIR:AT5G15220.1); similar to ribosomal protein L27 family protein [Arabidopsis thaliana] (TAIR:AT2G16930.3); similar to 50S ribosomal protein L27, chloroplast precursor (CL27) (GB:P30155); contains InterPro domain Ribosomal protein L27; (InterPro:IPR001684) 0.438844853492886 4.71309653653944 0.00070741348674563 0.0118973863446426 7.74246681906255 21.3352979134444 0.438844853492886 0.0792582240109815 AT5G62850_at 2.83866994209252 2.83176198960633 3.13213854413132 3.62963145439496 3.53378986909711 3.12831245920561 2.160536994555 2.77042330665758 2.42206861508271 1.99110043702515 2.53596702669379 2.55572665129219 2.28338786084675 2.74257850686514 3.12494866692176 2.7374443357482 2.85456591685277 2.73518730060745 2.31110532502232 0.196703692280962 0.195462419966433 0.201094797608068 0.201585003318869 0.198541157803264 0.201941448178609 0.194659407247028 0.202007664841243 0.199859269476231 0.202043612248179 0.211013770952005 0.204456344322608 0.202232665768949 0.197264334811295 0.198489031090643 0.194508868610338 0.216630144895886 0.201734318962173 0.197974704193972 5 5|0 -|/ 25247922 25248468 25248231.5 25247904 25248503 - gene protein_coding_gene TRUE TRUE AT5G62850.1 ATVEX1 (VEGETATIVE CELL EXPRESSED1) Encodes a protein that is expressed in vegetative cells of pollen. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G28007.1); similar to seven-transmembrane-domain protein 1 [Solanum lycopersicum] (GB:CAE47557.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 0.580210507165585 4.71075030336152 0.00071003298738391 0.011936811239717 7.73876863978816 5.47198335777017 0.580210507165585 0.153221328805158 AT5G43140_at 4.67585227368096 4.94267534620775 5.14418797930319 5.70956653345621 6.88660358784853 4.93159307127853 5.8204554989781 5.49281636479084 4.7037577672697 4.25566997402188 6.3742990530444 6.44578401780126 6.31612792622651 6.40177294250731 6.24342711014892 6.16546968791456 5.33821567250034 5.74866199852909 4.09320444470132 0.228805489538351 0.225766171474199 0.226516985957831 0.226278480929444 0.226629596982396 0.235464972645707 0.246110134163269 0.223749255295679 0.244523807879746 0.224177638857565 0.221437021205213 0.222473443041491 0.228961242145218 0.230574705149537 0.221437021205213 0.222090420705186 0.228060179357609 0.235157206930627 0.226033044910779 5 5|0 +|/ 17338965 17340227 17339684.1 17338773 17340636 + gene protein_coding_gene TRUE TRUE AT5G43140.1 peroxisomal membrane 22 kDa family protein similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT4G33905.1); similar to hypothetical protein DDBDRAFT_0189006 [Dictyostelium discoideum AX4] (GB:XP_635703.1); similar to Os12g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066849.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) 1.10669016390514 4.71008596699255 0.000710776559884626 0.0119428096982813 7.73772135702075 10.6905174301505 1.10669016390514 0.359698228960711 AT5G17400_at 4.26670460159349 4.06994138690022 4.9776504492397 4.99416085149356 6.05033924236317 5.43537894507689 5.1741872558763 5.12214638511726 5.39690099020224 5.62097822749214 6.16821292091295 5.79522698554156 5.77797537439459 5.90818871460526 5.68199633948982 6.56153096524559 5.63423558348137 5.63284061936489 5.81517362523685 0.208755447187012 0.201418854914409 0.198240834590015 0.194922159402305 0.19526897438354 0.193308008290322 0.192702420441789 0.196476537813963 0.206604455817555 0.197765252141463 0.197695144776257 0.194180455728172 0.193650873352114 0.193970996682543 0.196180626862162 0.192702420441789 0.196442634976699 0.199700389758705 0.204889476407203 5 5 - 5729043 5729628 5729317.727 5728793 5730378 - gene protein_coding_gene TRUE TRUE AT5G17400.1 ADP, ATP carrier protein, mitochondrial, putative / ADP/ATP translocase, putative / adenine nucleotide translocator, putative similar to AAC3 (ADP/ATP CARRIER 3), ATP:ADP antiporter/ binding [Arabidopsis thaliana] (TAIR:AT4G28390.1); similar to Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE81429.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.495072894120301 4.70993942146604 0.000710940694795195 0.0119428096982813 7.73749032912685 10.7643354158025 0.495072894120301 0.112135252670514 AT5G19855_at 8.3934596081624 8.43964975828465 9.11821800837082 9.22439255888678 9.59262532289024 9.06422773144458 9.6433162919233 9.58234159059668 8.87944060917958 8.8882522379706 9.59094860276863 9.49396628823865 9.65880425087674 9.5852504847995 9.43200430177985 9.68659738901185 9.38725076536864 9.44838435779308 8.77037683223041 0.126386853435724 0.136094818438397 0.134382621158487 0.137420584511568 0.13158261561358 0.134866111345851 0.126003120890428 0.125995657087623 0.139149597893026 0.13890593832901 0.132609417025658 0.126203243962596 0.133715390040427 0.130844234259582 0.128242772051984 0.127534433110996 0.131507260686074 0.128364977272099 0.130301815118135 5 5|0 -|/ 6712172 6713397 6712986.5 6711974 6713638 - gene protein_coding_gene TRUE TRUE AT5G19855.1 similar to Os03g0807900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051646.1); similar to chaperonin-like RbcX [Trichodesmium erythraeum IMS101] (GB:YP_723870.1); similar to Os07g0569600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060039.1) 0.462275835887885 4.70586898356991 0.000715515735366917 0.0120150088076437 7.73107209190928 18.3229908745898 0.462275835887885 0.0942041455778997 AT5G17580_at 1.31265979716471 1.88598040978156 2.08859830824172 2.11935316034561 2.30350042348362 2.17398103001405 2.26809924899251 1.74016151977137 1.62375598346592 1.99819449852297 2.35401684913652 2.56873010153779 2.19999675258849 2.92799353858465 2.12691846741987 2.69822255241724 2.31462261645461 2.08325635356004 1.45017721804407 0.21813861274497 0.215883379514758 0.220425120165926 0.220689318643467 0.218849493902552 0.224772126189054 0.221062821658553 0.214352131645477 0.219390353042003 0.212721462434362 0.212721462434362 0.219551493611906 0.212727133371411 0.229743765298966 0.221918381390196 0.213035469098293 0.219767344997447 0.213131940314644 0.220529154891319 5 5 + 5796434 5796971 5796653.273 5795304 5797180 + gene protein_coding_gene TRUE TRUE AT5G17580.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G03510.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97835.1); similar to NPH3 family protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85278.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97836.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.544071703605898 4.7048928112099 0.000716617539269568 0.0120288516701938 7.72953251940565 4.03650618087775 0.544071703605898 0.136826598248501 AT5G13170_at 1.10228027015444 1.24613461331594 2.82327013451988 2.85353463506133 1.54280180952763 1.94426468328697 2.54148714314293 2.73325089902409 1.89008169213572 1.83353666785377 1.84567667229641 1.97204388697593 2.10239388697264 2.08600935578361 2.01748799527417 2.67287673102948 3.35972818139602 2.34094477553271 1.68582985651100 0.203428692087995 0.203398893348258 0.199470583083824 0.20658404394026 0.202926073209262 0.202389495982118 0.199470583083824 0.204638495038866 0.200051600019541 0.205908227646127 0.199470583083824 0.201574502510950 0.214620884200427 0.201648315911869 0.201146685258389 0.204738851233306 0.219860351674552 0.214464694176831 0.199470583083824 5 5|0 -|/ 4181348 4182062 4181742.6 4181045 4183309 - gene protein_coding_gene TRUE TRUE AT5G13170.1 nodulin MtN3 family protein similar to MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) [Arabidopsis thaliana] (TAIR:AT5G23660.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 0.440837682173529 4.70450395596777 0.000717056938563666 0.0120315692660366 7.72891919765896 4.14977531908304 0.440837682173529 0.0810878441946538 AT5G42480_at 7.73699359301711 7.8807794887865 7.97943350443216 8.1164377824153 8.45518480350687 8.13452038119454 8.20374031432809 8.08799403399904 8.00880244186837 8.00442598637072 8.72632673909863 8.72322338869582 8.44662233952107 8.65558412541912 8.57558308335856 8.7965747272471 8.70901486156047 8.28794934121743 7.88095196533603 0.144903516576847 0.137641879238419 0.150181771154751 0.144733819898427 0.139231184828481 0.143899898350400 0.136018608780665 0.139354942857256 0.157025508502678 0.140885108777759 0.135208173748576 0.135375063150196 0.135208173748576 0.144645873345196 0.144320329194892 0.136369305650249 0.145325928994249 0.154763798910952 0.138510626171266 5 5|0 +|/ 17004620 17005531 17005121 17002410 17005668 + gene protein_coding_gene TRUE TRUE AT5G42480.1 ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast. similar to cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G19180.1); similar to Os02g0122400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045726.1); similar to TPA: TPA_exp: plastid division protein precursor [Oryza sativa (indica cultivar-group)] (GB:DAA01472.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.422200144130469 4.70349828968223 0.000718194643556802 0.0120459971669893 7.72733291113335 16.3643037995215 0.422200144130469 0.0682782190456242 AT5G40810_at 10.2491096663411 10.3610855351775 10.8031904225963 10.7981316187810 10.7283958626103 10.2189599367289 10.5703439629663 10.5971290257001 9.81938542586603 10.0728056509460 10.6854181435691 10.7509582234840 10.6424977113081 10.6595120038370 10.7802890723476 10.6684809982171 10.3674277380278 10.5961739103220 9.88441488709818 0.08673339407888 0.085748977310875 0.0892544242143077 0.087600504959523 0.0858229067878308 0.101086880474018 0.08785405494133 0.085748977310875 0.106370844766296 0.0875644441243675 0.0886442918391553 0.085748977310875 0.0870187013020838 0.0883848369435046 0.0862776057360592 0.0864085415590319 0.0944734763005527 0.0901314945565888 0.093989208348815 5 5|0 +|/ 16358315 16359519 16358795.8 16357121 16359872 + gene protein_coding_gene TRUE TRUE AT5G40810.1 cytochrome c1, putative similar to cytochrome c1, putative [Arabidopsis thaliana] (TAIR:AT3G27240.1); similar to Cytochrome c, monohaem [Medicago truncatula] (GB:ABE81122.1); contains InterPro domain Cytochrome c, monohaem; (InterPro:IPR009056); contains InterPro domain Cytochrome c region; (InterPro:IPR012282); contains InterPro domain Cytochrome c1; (InterPro:IPR002326) 0.455530908234280 4.70254817878047 0.000719271251113277 0.0120593895423962 7.72583412254364 20.8254832770839 0.455530908234280 0.0903879914001607 AT5G48300_at 10.9546343477892 10.8403381418721 11.2861711934851 11.1355786961180 11.2579695254467 10.8659333181584 11.4117855349460 11.1686143364421 10.7971389139800 11.0242315106736 11.4787993696329 11.6181435120652 11.3668122674937 11.6140480489605 11.8297569464719 11.7495943214922 11.5949050062836 11.7761921567085 10.5017150459600 0.0843519375816806 0.0800682013511279 0.0858181520877976 0.0873237950376037 0.0828656262753143 0.0846088267982562 0.0816915384793158 0.0811964227131717 0.089784608562087 0.082363103119456 0.0800682013511279 0.0805666480128437 0.0800682013511279 0.0826786448788654 0.0821466759341462 0.0807459199884767 0.0847533104158138 0.0800682013511279 0.083653395903105 5 5|0 +|/ 19588699 19589744 19589270.333 19587466 19590030 + gene protein_coding_gene TRUE TRUE AT5G48300.1 ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1); glucose-1-phosphate adenylyltransferase Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested. Identical to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (APS1) [Arabidopsis Thaliana] (GB:P55228;GB:O64400;GB:Q96534); similar to ADG2 (ADPG PYROPHOSPHORYLASE 2), glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] (TAIR:AT5G19220.1); similar to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (GB:Q9M462); similar to ADP-glucose pyrophosphorylase small subunit-like [Solanum tuberosum] (GB:ABA81851.1); similar to ADP-glucose pyrophosphorylase small subunit CagpS1 [Cicer arietinum] (GB:AAK27720.1); contains InterPro domain Glucose-1-phosphate adenylyltransferase; (InterPro:IPR011831); contains InterPro domain ADP-glucose pyrophosphorylase; (InterPro:IPR005836); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835) 0.448369861570186 4.69783035099604 0.000724642515986765 0.0121404155899911 7.71838990287257 22.3165747753704 0.448369861570186 0.0862788740830538 AT5G63910_at 7.82459295681569 7.49869353948411 8.09804327105835 8.2388988065211 8.82939910420078 7.82956728040116 8.00461114079119 7.36547414516544 6.78488201759411 7.12429965384382 7.93755830630338 7.97342934887704 7.93649996863746 7.8850223765017 8.11231423626737 7.8329704983261 7.82858820678258 7.50606209451689 7.11136801420996 0.218222997602140 0.222782325264527 0.21952362884249 0.225571664650891 0.228499301237559 0.230858358487372 0.223231333175228 0.226098520188942 0.235320238122704 0.224450447502267 0.223952374793757 0.223892369566663 0.218222997602140 0.224698959499970 0.226017591495619 0.218222997602140 0.239712408171051 0.224810714952107 0.22890072171965 5 5 - 25589283 25589990 25589719.091 25589091 25591313 - gene protein_coding_gene TRUE TRUE AT5G63910.1 Identical to Probable prenylcysteine oxidase precursor (EC 1.8.3.5) [Arabidopsis Thaliana] (GB:P57681); similar to hypothetical protein LOC550289 [Danio rerio] (GB:NP_001017626.1); contains InterPro domain Prenylcysteine lyase; (InterPro:IPR010795) 0.722669952145925 4.69775193525361 0.000724732149794048 0.0121404155899911 7.71826614459925 15.402862792926 0.722669952145925 0.214351132066571 AT5G19350_at 9.24239829604803 9.21613495311304 10.1490095566556 9.96995248727264 10.2211544003738 10.0101088870863 9.24969977006885 9.10836205320027 9.02592422425978 9.38681105186403 9.24989905983708 8.9049355542828 9.30781975438635 9.2390007078487 8.7553212960472 9.46328647615017 9.55599214386532 8.95800069244996 9.35135243835538 0.107817910744124 0.106920180908228 0.108675485133849 0.108390221457208 0.109841266957614 0.107514476827370 0.110169418487538 0.110229600353686 0.115333304139216 0.113623383348783 0.113392638150615 0.114642400289526 0.112607531872415 0.11659603904472 0.118294866689483 0.108085829012837 0.114351752685907 0.117977419319385 0.113628948315578 5 0|5 /|+ 6520655 6521267 6521053.875 6518840 6521476 + gene protein_coding_gene TRUE TRUE AT5G19350.1|AT5G19350.2 RNA-binding protein 45 (RBP45), putative similar to ATRBP45B, RNA binding [Arabidopsis thaliana] (TAIR:AT1G11650.2); similar to RNA-binding re (GB:ABE90872.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to ATRBP45A (RNA-BINDING PROTEIN 45A), RNA binding [Arabidopsis thaliana] (TAIR:AT5G54900.1); similar to ATRBP45B, RNA binding [Arabidopsis thaliana] (TAIR:AT1G11650.2); similar to RNA-binding re (GB:ABE90872.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.403996810260789 4.69756663679981 0.000724944003371573 0.0121404155899911 7.71797369708247 18.8628414831947 0.403996810260789 0.0539719061737588 AT5G26220_at 8.06432894976996 8.24622508015208 7.85358063437334 7.61372754271844 8.22145562287434 7.65664343614592 6.6163580133766 7.17612588446614 5.37492084748711 5.68884189312489 6.91167158899979 4.7363440907054 6.81986513335085 7.22483244504512 4.35568645928122 5.62065556245759 7.15066133124531 5.97423650443743 4.77881429405878 0.285413831612555 0.277775519267772 0.282426917617628 0.277775519267772 0.281108503160245 0.28755777438304 0.287476955810695 0.279466180794772 0.299550911656609 0.277775519267772 0.277775519267772 0.286948275910157 0.278646798405008 0.277775519267772 0.29224264602184 0.279854850109086 0.286049985608402 0.291098232962896 0.292655695636069 5 0|5 /|- 9163182 9164381 9163647.571 9162972 9164688 - gene protein_coding_gene TRUE TRUE AT5G26220.1 ChaC-like family protein similar to ChaC-like family protein [Arabidopsis thaliana] (TAIR:AT4G31290.1); similar to ChaC-like family protein-like [Solanum tuberosum] (GB:ABB87104.1); similar to meloidogyne-induced (GB:ABA46779.1); contains InterPro domain ChaC-like protein; (InterPro:IPR006840) 0.564488727485113 4.69104004625703 0.000732447807682811 0.0122613435686473 7.7076699840994 13.3711072209832 0.564488727485113 0.147144156847747 AT5G02120_at 11.0406329157911 11.1509694698350 11.5016673358735 11.4924989443134 11.6366796282121 11.6390623335117 11.7474580382203 11.7407525169991 11.9216222801889 11.8192019956247 12.6587833694698 12.5710624180817 12.2070352380318 12.4626733271916 12.5061970440335 12.5879061622545 12.2720282989609 12.3949855180344 11.8169796807756 0.0638657647904631 0.0626942112906728 0.0651829962017068 0.0617114563214827 0.0619300265356812 0.0658018991563392 0.0631601655609429 0.0670082900285245 0.065762341539248 0.0622049663908919 0.0612724366269253 0.0611460037149323 0.0667837089624756 0.0631630059894978 0.0639227692150704 0.0611460037149323 0.066256480569259 0.0629083058855659 0.0616645829648129 5 5|0 +|/ 419174 419604 419324 419088 419770 + gene protein_coding_gene TRUE TRUE AT5G02120.1 OHP (ONE HELIX PROTEIN) Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. similar to one helix protein [Ipomoea nil] (GB:AAP23938.1) 0.376253214205249 4.69059201348371 0.000732965924039824 0.0122652813249300 7.70696244012107 23.6488077682797 0.376253214205249 0.0191995986833571 AT5G23900_at 9.25834445782615 9.5598686611957 9.60292304917386 9.65485476188777 9.84856749346462 9.92323151965592 9.35353979802546 9.4437986846729 9.43753509009807 9.56760806325308 10.2044576141384 10.1809816817096 10.0209912698889 9.85174322592656 10.5940645616096 9.7655526243864 9.81418979164493 9.84881491996176 9.72232957886203 0.109366396944389 0.104318422994136 0.103791502849131 0.099911318692066 0.103929356418629 0.106199704999386 0.104297903489857 0.107332337123101 0.110625459639332 0.103961210180537 0.106807994509264 0.101882788466179 0.105062528368773 0.112499563462777 0.102933014335560 0.105975146952685 0.107451639524431 0.108356212108309 0.100043973764934 5 5|0 -|/ 8064205 8065031 8064565.7 8063988 8065526 - gene protein_coding_gene TRUE TRUE AT5G23900.1 60S ribosomal protein L13 (RPL13D) Identical to 60S ribosomal protein L13-3 (RPL13D) [Arabidopsis Thaliana] (GB:Q9FF90); similar to ATBBC1 (breast basic conserved 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G49010.3); similar to 60S ribosomal protein L13-2 (Cold-induced protein C24B) (GB:P41129); contains InterPro domain Ribosomal protein L13e; (InterPro:IPR001380) 0.406390761351353 4.68940832751673 0.000734336631612972 0.0122834776016969 7.70509299805538 19.3861029058525 0.406390761351353 0.0566962394823541 AT5G55740_at 5.80572579315554 5.88087198771939 5.74870052639833 5.82546885187168 7.08899029623664 6.66220780919968 7.01782583039267 7.15939075931906 5.5548198610739 6.57142507793488 7.25522785922491 7.84423588219252 7.45282851744673 7.2016093146141 7.71026121288249 7.6023012556675 6.63884090143247 6.11870090848455 6.52888512640268 0.207590779065850 0.207595528665142 0.210976377367962 0.206749711723519 0.206151205762553 0.213863600504914 0.204719114655773 0.203615610424426 0.207581386735737 0.207682518814017 0.207438616670675 0.205452846287259 0.207700026537857 0.208427488143970 0.206215894191210 0.206245930356488 0.211380398606846 0.213869617417851 0.207190517600154 5 5 - 22579250 22579742 22579509.727 22579167 22581659 - gene protein_coding_gene TRUE TRUE AT5G55740.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G21300.1); similar to OSJNBa0016O02.23 [Oryza sativa (japonica cultivar-group)] (GB:CAE06013.3); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83958.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.437506160651294 4.68660333741355 0.0007375956300866 0.0123332336924159 7.7006621721865 13.1218364417684 0.437506160651294 0.0800037244740621 AT5G35170_at 10.6970856555135 10.5296143825202 11.4999260890091 11.2519574588714 11.8185862209719 11.3491666380038 11.5952433856345 11.1708535459450 11.0940513541526 11.6498573549866 12.2074002565654 11.8040681625066 11.9599307171737 12.0546435406578 11.7228440885653 12.1582992376007 11.9506966932427 11.8527762982939 11.5338701291441 0.0824464101937567 0.078376095617881 0.0816773722640704 0.0806413832080653 0.0802399454330534 0.0852145110410085 0.081024342223873 0.0794901320880575 0.0901333418550481 0.0800627007327984 0.0789038060261573 0.078376095617881 0.0802653018837543 0.0824648284309995 0.0793735279564787 0.079024921485794 0.0822848045821782 0.0862724415955475 0.0804410744692174 5 5|0 +|/ 13439379 13440451 13439949.778 13436396 13440976 + gene protein_coding_gene TRUE TRUE AT5G35170.1|AT5G35170.2 adenylate kinase family protein|nucleotide kinase similar to adenylate kinase, chloroplast, putative / ATP-AMP transphosphorylase, putative [Arabidopsis thaliana] (TAIR:AT5G47840.1); similar to Os08g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060810.1); similar to Adenylate kinase, chloroplast (ATP-AMP transphosphorylase) (GB:P43188); similar to Os08g0288200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061454.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) 0.509807977104356 4.68473000432448 0.000739780681913333 0.012365001031175 7.69770239107828 22.9339334989354 0.509807977104356 0.121137838175576 AT5G35520_at 3.03427820242367 3.09582437670901 3.62863697317853 3.5501720749934 3.67720898919778 3.29178642026686 3.05663820736419 2.71504572958371 3.64012762563496 3.26857144879911 4.00386031162838 3.85159246203653 3.79190298381696 3.96530315525105 3.81650068368268 3.63970666212272 3.81265303535688 3.94815076436254 3.61378016073912 0.248256617305979 0.243215719380051 0.257732846501854 0.252617738962333 0.263794662541673 0.249608373390211 0.249285470305737 0.251794183854844 0.246821178359026 0.254256349149316 0.260611402490196 0.248697250387219 0.250204493115201 0.259584158792000 0.247538793036131 0.253917498043073 0.248246915127409 0.243215719380051 0.243943344812757 5 5|0 +|/ 13719022 13720635 13720043.667 13718626 13720719 + gene protein_coding_gene TRUE TRUE AT5G35520.1 kinetochore protein-related similar to Mis12 [Medicago truncatula] (GB:ABE85102.1); contains InterPro domain Mis12; (InterPro:IPR008685) 0.453860082140074 4.67860404156983 0.000746973851835668 0.0124804193913292 7.68802017464217 6.93679978955128 0.453860082140074 0.090780433764827 AT5G01030_at 5.68601005041897 6.39684322477504 6.85255647562824 7.30456839406119 6.7863732284467 7.43528877317028 5.75933097955582 6.42306214598204 6.08314309186921 6.4077620308457 6.62060846182645 6.6438969940114 6.6970569442633 6.45627552778426 6.44247607393485 7.01227260344165 6.8554773705693 6.46352581915527 6.19126659617001 0.198427460830827 0.189758600997833 0.198178786398556 0.195327344022996 0.187687430256465 0.190069621863854 0.187582557826441 0.191617179317338 0.193104834905971 0.195044683916998 0.192301312818222 0.18889259337662 0.195135884641649 0.193229365869034 0.195262794016157 0.187379439758296 0.189389274469684 0.188625234174146 0.188601119146028 5 5 + 12274 12977 12695.545 9868 13234 + gene protein_coding_gene TRUE TRUE AT5G01030.1|AT5G01030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37930.1); similar to hypothetical protein MtrDRAFT_AC146330g22v1 [Medicago truncatula] (GB:ABE90884.1); contains domain Transcriptional factor tubby, C-terminal domain (SSF54518) 0.724971634527655 4.67152867439329 0.000755373849747348 0.0126159047143073 7.67683078977896 13.0186738076723 0.724971634527655 0.216921727368011 AT5G42240_at 7.2470700440602 7.36268992990863 7.68488143537066 7.53516447850494 8.34678551018984 8.03380341206798 7.80248571150608 7.45426616732446 7.20843606158767 7.31009988029825 7.66191768638754 8.22761168564374 7.9621314556487 7.69735479585831 7.56237455500318 8.10231244575463 8.05319686277102 7.2870361768086 7.5556518907481 0.188707478748425 0.170777218670108 0.191050757366125 0.201644500113119 0.182755391363406 0.191437071950542 0.187048504122473 0.183314772496363 0.194572309759390 0.186424456077385 0.180207256071561 0.184696762552644 0.176443336689206 0.177541831036956 0.183404194742233 0.173461388779024 0.200473013702339 0.184566053751315 0.177290675913955 5 5|0 +|/ 16907228 16908124 16907734.556 16905454 16908420 + gene protein_coding_gene TRUE TRUE AT5G42240.1 SCPL42 (serine carboxypeptidase-like 42); serine carboxypeptidase similar to SCPL43, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G12480.1); similar to SCPL41 (serine carboxypeptidase-like 41), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G42230.1); similar to SCPL44 (serine carboxypeptidase-like 44), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G43780.1); similar to Os11g0213600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067496.1); similar to Serine carboxypeptidase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93967.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.447355046469988 4.66857564313499 0.000758909192064955 0.0126700697543836 7.67215860489464 15.2720456205478 0.447355046469988 0.0873879394556202 AT5G03880_at 11.0040286397275 11.0553567345854 11.4972272118175 11.4708574007904 11.4423451867878 11.3461828556473 11.5190977272756 11.6551518344659 11.2236756234968 11.4956410428557 12.1448375114547 12.0582592936378 11.9359480697150 11.9614830960280 11.9063261433344 12.134946865015 11.7804656462651 11.9096655418400 11.3281117832243 0.0858370803383366 0.0829869649603906 0.085223628711004 0.0842668204005394 0.0829869649603906 0.0848409045505287 0.085671069206276 0.0856779435187387 0.0870629244661736 0.0875017570482994 0.0835097334968108 0.0836728434154645 0.0836545639769989 0.0877718557241524 0.085809540248019 0.0829869649603906 0.0928501277620135 0.091422901308828 0.0833136740671767 5 0|5 /|- 1038873 1040253 1039458.667 1038507 1041479 - gene protein_coding_gene TRUE TRUE AT5G03880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.2); similar to Os08g0558200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062492.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56846.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.380296567066429 4.6645607022138 0.00076374389443312 0.0127458777014754 7.6658043261728 23.0378481176056 0.380296567066429 0.0305125624783501 AT5G47500_at 1.82362988032374 1.59237646730874 1.89921948445318 1.66446088274088 1.56109746834858 1.61311373071674 1.44238310137269 1.51335769743038 1.61064248541581 2.19385923801855 2.37011558590195 3.31621221761355 2.33177747579706 1.99895008362752 3.20170934563426 3.18391565193967 2.19464710020559 2.58468275142501 1.97739625155419 0.222352064795016 0.227468492231341 0.233207013090077 0.234449776213666 0.223087000423392 0.229625033599487 0.227754865802717 0.222352064795016 0.224135361573192 0.224467068723852 0.227692987086476 0.237563467577660 0.229301187117501 0.222352064795016 0.231647949872733 0.235771629798141 0.230646093974852 0.226312072554308 0.222352064795016 5 5 - 19288489 19289265 19288837.727 19288186 19290110 - gene protein_coding_gene TRUE TRUE AT5G47500.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19730.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD65006.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD64977.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) 0.405994028238925 4.65337761634881 0.000777382546604186 0.0129684970842894 7.64809333163395 3.92623013984400 0.405994028238925 0.0590247897662991 AT5G02590_at 2.90675244835607 3.33085765446072 3.65483861635862 3.80228319200452 3.10432979359279 3.2255790178009 3.42065100284763 3.71216409409326 3.57895502165102 2.69119770667493 3.90451439840946 4.1595999465041 3.38214053886749 3.71976243066236 3.90082419968834 3.89787282893189 3.06519868071095 3.73771446404281 2.45713470642901 0.204430368597432 0.205460661455797 0.206827287502868 0.209887602878061 0.199220380544526 0.199203402872880 0.199823653837509 0.201099835524983 0.203781012148222 0.216745427154678 0.19763845552644 0.205497868872506 0.200584975280968 0.208130513344018 0.210473920235758 0.200853438773402 0.211568711499427 0.201085931368535 0.205234092150997 5 5 + 583502 584060 583708.636 583084 584177 + gene protein_coding_gene TRUE TRUE AT5G02590.1 chloroplast lumen common family protein similar to chloroplast lumen common family protein [Arabidopsis thaliana] (TAIR:AT3G53560.1); similar to Os05g0182100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054818.1); similar to TPR repeat [Medicago truncatula] (GB:ABE81686.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.458004489695988 4.64888650470169 0.000782931966171955 0.0130560504495540 7.64097566086266 6.7097066012204 0.458004489695988 0.0949889444350771 AT5G38660_at 10.9419282836161 11.0429778831689 11.5768556607048 11.4365017161261 11.6723156301977 11.3930198207394 11.7252830358691 11.3066185639399 11.2395393594909 11.2178239484171 12.0061872739854 11.8263132669179 11.7899529545837 11.6131284507827 11.8216806912134 11.8230746199111 11.8383663246349 11.7575146907926 11.0523355078758 0.0900306546637936 0.0906014099891169 0.0987143543833503 0.0900684790866871 0.089221214143154 0.0912373185397407 0.089221214143154 0.091055579296005 0.0967810885621622 0.089221214143154 0.0897445550792587 0.0909553482437303 0.0922415033386593 0.103559055364862 0.097804001850634 0.089221214143154 0.100716726427172 0.0974604357035804 0.0919963854793488 5 5|0 -|/ 15490890 15492141 15491530 15490339 15492765 - gene protein_coding_gene TRUE TRUE AT5G38660.1 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) mutant has Altered acclimation responses; similar to Os08g0359000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061627.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56528.1) 0.45254947206746 4.64276109900790 0.00079056830092076 0.0131783241817408 7.63126332906963 22.8766510189772 0.45254947206746 0.0920931072749427 AT5G46800_at 9.88724689323142 9.9616372661808 10.3939831323623 10.4768129918326 10.4654682228219 10.3437202974851 10.7549713143208 10.8308666269479 10.238545104107 10.1676903231261 10.9162994067977 10.9063044937248 10.7763620248361 10.8918573293911 10.8332446338433 11.0918226654708 10.5598732204027 10.7070549598269 10.0105368011484 0.0843589416070713 0.0850645433684599 0.0893647521680708 0.0835228130746593 0.0854992525494489 0.089546494700185 0.082322182756847 0.0823653426112358 0.0880317783930667 0.0879207532791865 0.0833982977755627 0.0853910019279936 0.082322182756847 0.0919085217297907 0.0846177595986105 0.0832250909962744 0.0867820430465654 0.0824236294046105 0.0876132793981994 5 5 - 19006028 19006699 19006372.273 19005858 19007991 - gene protein_coding_gene TRUE TRUE AT5G46800.1 BOU (A BOUT DE SOUFFLE); binding Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein Identical to Mitochondrial carnitine/acylcarnitine carrier-like protein (Protein A BOUT DE SOUFFLE) (Carnitine/acylcarnitine translocase-like protein) (CAC-like protein) (BOU) [Arabidopsis Thaliana] (GB:Q93XM7;GB:Q9FIP5); similar to mitochondrial substrate carrier family protein (BAC1) [Arabidopsis thaliana] (TAIR:AT2G33820.1); similar to DIFferentiation abnormal family member (dif-1) [Caenorhabditis elegans] (GB:NP_501223.1); similar to Os10g0573700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065471.1); similar to Os10g0573800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065472.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.378871950807354 4.63962698235875 0.000794505865526182 0.0132388712295344 7.6262918913897 20.8764765521048 0.378871950807354 0.0314261594694087 AT5G61920_at 2.27789631038264 2.70796662042868 3.10076462810456 3.133084310876 2.70309795325309 2.99150690785625 2.55099223129977 2.31796578348575 2.24230263077386 2.72110821811582 2.71710974084455 2.49554447388274 2.95745827631197 3.01633766210978 2.99778616936946 3.15162841398323 2.95221233732763 2.84309440759204 2.49109192346261 0.183575114262421 0.180189864707603 0.186891491350662 0.184719025349838 0.174366476037218 0.182634538944767 0.186110998799428 0.177267939064253 0.189192862372057 0.176661149015576 0.174366476037218 0.174366476037218 0.179809997812112 0.174737744553367 0.179691331920689 0.175681081805064 0.185158358497476 0.17679606748215 0.181377130385559 5 5 + 24882181 24882814 24882372.727 24882056 24882854 + gene protein_coding_gene TRUE TRUE AT5G61920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14750.1); similar to transglutaminase [Zea mays] (GB:CAD13455.1); similar to transglutaminase [Zea mays] (GB:CAD32336.1) 0.46248519567509 4.63474288234088 0.000800683350500628 0.0133366812670444 7.61854182417557 5.41102468952506 0.46248519567509 0.0984262885872999 AT5G40980_at 1.97606386647388 2.21898682130861 2.18450588854509 2.42330599234106 1.78398468960064 1.96925715388174 1.89371923705252 2.86555131081230 2.10901604714641 2.55212984716289 4.21355346449739 5.14139033129092 3.2728470680946 3.61909835083055 4.41020103682783 3.8038219374188 2.17113230162661 3.66368739402246 2.45552581355835 0.224083727350413 0.222268172084819 0.228909235242188 0.226319584721731 0.221757756234109 0.220507770408712 0.218262132250242 0.218328653667541 0.231059871675546 0.225195917023145 0.225657255851883 0.219710340041285 0.223571429259879 0.220703982343887 0.220240701802039 0.221971180576486 0.236091979543061 0.221254235092140 0.221095842328134 5 5 - 16432110 16432288 16432195.364 16432076 16432448 - gene protein_coding_gene TRUE TRUE AT5G40980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01940.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84797.1); similar to Os01g0923200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045237.1) 0.633212852566949 4.6317418431058 0.000804504239154337 0.0133951783176184 7.61377812935576 5.24401706410132 0.633212852566949 0.181073448117312 AT5G61150_at 6.8819313318161 6.82532543283854 7.35940056889247 7.6035558163464 8.0347100031094 7.13311538255695 6.85728987428157 6.93441976951114 6.8647330557581 6.71287526790507 7.563044774193 7.38166973488198 7.51623340209837 7.53131749092876 7.31822640462163 7.49320667440241 7.06968004979342 7.00193286541097 6.93230259213338 0.178185978125883 0.168594595994666 0.184951504558288 0.176704153498725 0.189410203320174 0.17739068810721 0.182278968227796 0.170334084830338 0.189658538771957 0.177000341223924 0.171580598123693 0.169298893650438 0.167671633391918 0.174934748376324 0.181154396384756 0.169878042177328 0.169570994125086 0.187723439126134 0.172114262478123 5 5 - 24621092 24621874 24621456.545 24620882 24624951 - gene protein_coding_gene TRUE TRUE AT5G61150.1|AT5G61150.2 VIP4 (VERNALIZATION INDEPENDENCE 4) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to Os12g0579000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067127.1); similar to putative VERNALIZATION INDEPENDENCE 4 [Oryza sativa (japonica cultivar-group)] (GB:BAC79561.1); contains InterPro domain Leo1-like protein; (InterPro:IPR007149) 0.590365396611802 4.62743481634712 0.000810021558173993 0.0134800245597862 7.60693917177459 14.3017439706558 0.590365396611802 0.162490670981126 AT5G10690_at 8.28955921112647 8.0096399347501 8.36821468841898 8.39193448100692 8.8630606459463 8.59341817231248 8.41900020050192 8.00763811923163 8.39697318772155 8.78430993535405 9.08559735931704 9.5966408694161 8.98268215862768 9.09278187393091 9.76050354431673 9.534885327561 9.10836336568538 8.91557211745765 8.94941790897006 0.114603169386197 0.112685705366142 0.116305706181486 0.121244973740274 0.114409323528806 0.115935236826669 0.115012451300095 0.117218023817945 0.113114882169128 0.116284589282390 0.114186226975578 0.112222228963106 0.112236912250954 0.112834052816331 0.113793253841572 0.111052476595229 0.124297876333920 0.116078512839524 0.113074828046633 5 0|5 /|- 3374613 3375323 3374940.5 3374394 3377431 - gene protein_coding_gene TRUE TRUE AT5G10690.1 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G12775.1); similar to pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33810.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain CBS; (InterPro:IPR000644) 0.461046140104576 4.62727904184461 0.000810221852664203 0.0134800245597862 7.60669177491376 17.3527391838557 0.461046140104576 0.0980234006451537 AT5G63030_at 9.41490705229494 9.6433933782913 10.0909609708556 10.2704175543765 10.2647542719279 10.0182353302058 9.19126978787084 9.40187290507488 9.2599251815129 9.40014962333905 9.6918617362757 9.19818449603245 9.57380418410795 9.5552702297836 8.92172460730056 9.46724671056663 9.38578783320319 9.55889222589339 9.29188637599697 0.124801011289791 0.122639982394193 0.123961267596753 0.118882153001675 0.124246872011588 0.122509723261211 0.125405150091518 0.121995958548596 0.135918207581406 0.118882153001675 0.12808084256248 0.120217422046745 0.118882153001675 0.129184235707066 0.131061551611838 0.118882153001675 0.122961624837704 0.127331560650059 0.120351057010293 5 5|0 +|/ 25303622 25304711 25304343.1 25303449 25304920 + gene protein_coding_gene TRUE TRUE AT5G63030.1 glutaredoxin, putative Identical to Glutaredoxin-C1 (AtGrxC1) (GRXC1) [Arabidopsis Thaliana] (GB:Q8L8T2;GB:Q8RXH1;GB:Q9FM49); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G40370.1); similar to Glutaredoxin, eukaryotic and viruses [Medicago truncatula] (GB:ABE93578.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.425003680118799 4.62593824971769 0.000811948002627719 0.0135035615716474 7.60456222458567 19.1551848546181 0.425003680118799 0.0753406011475985 AT5G02270_at 5.71241316956775 5.87372846303847 6.55178062551773 6.64109734756702 6.03249014400437 6.35487173897829 6.78606999983833 7.09641329263216 6.51598798600744 6.40788393168074 6.89773285932754 7.2166853422523 7.34872870716422 7.55698777235235 6.82448222619547 7.28940098057148 6.8745229649907 6.9035321973453 5.87904713126757 0.209745104320648 0.208177586659423 0.219621882561942 0.212502288337591 0.200273832944175 0.212550700357386 0.202321422706820 0.208209816445280 0.225920680250944 0.207370823381326 0.214660274196047 0.207168492109541 0.206564673933597 0.220300427223943 0.217468816719388 0.202565940511353 0.208957521232699 0.198528906200735 0.2009573167522 5 5|0 -|/ 467310 468422 467765.4 467106 469078 - gene protein_coding_gene TRUE TRUE AT5G02270.1 ATNAP9 (Non-intrinsic ABC protein 9) member of NAP subfamily Identical to Non-intrinsic ABC protein 9 (GCN-related protein 3) (NAP9) [Arabidopsis Thaliana] (GB:Q9LZ98); similar to POP1 [Arabidopsis thaliana] (TAIR:AT5G44110.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL50045.1); similar to Os03g0316900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049940.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.437136590518672 4.62145359256529 0.000817749852328534 0.0135948377782474 7.59743751547513 13.0719325047731 0.437136590518672 0.0837561247513238 AT5G41880_at 2.62405150992728 2.44174553706032 3.28040537625412 3.7354974316939 1.96355257142302 2.31290311479965 3.54851330562242 3.6106330517432 2.23738522342131 2.61631475675145 3.45102697357970 4.97340220364348 2.75966771991701 3.65515816831393 5.02550344008539 2.57353009478034 2.69829043102522 3.57313153360594 2.38671386064924 0.227345390887171 0.229924815221722 0.230033885170916 0.224906249268045 0.233282685555820 0.237938038567553 0.227131322410008 0.229622218239243 0.221224640988398 0.223425534302603 0.224163095828238 0.228637364215471 0.221581075255140 0.231335731279668 0.232090580490263 0.221224640988398 0.230953457821482 0.226896673889996 0.224188472889358 5 5|0 +|/ 16779781 16780919 16780537.222 16778299 16781011 + gene protein_coding_gene TRUE TRUE AT5G41880.1 DNA primase small subunit family similar to PREDICTED: similar to primase, polypeptide 1, 49kDa [Strongylocentrotus purpuratus] (GB:XP_791278.2); contains InterPro domain DNA primase, small subunit, eukaryotic; (InterPro:IPR012192); contains InterPro domain DNA primase, small subunit; (InterPro:IPR002755) 0.471048156399625 4.60981772423593 0.00083300824626068 0.0138431958731234 7.57893867630616 5.94075528776192 0.471048156399625 0.104730090644192 AT5G44340_at 11.0920315767834 11.2658611565609 11.052154194243 11.1148021421153 11.2924846675606 11.2868114660851 10.6870666952758 11.0238319222311 11.5765978087659 10.9228527302588 12.4003913288338 12.2034773972108 11.7965693860073 11.9458560733869 11.9979838354472 11.5416642891148 11.0633388205864 11.7526223216146 11.0542258810260 0.0731755585235477 0.0712963432925474 0.0757714690230141 0.0739658945659432 0.0712972706862993 0.0735842572024574 0.0720814221457834 0.0751964028051098 0.0794477425550943 0.0717888946346458 0.0722232348832006 0.0712963432925474 0.0721899803087304 0.0712963432925474 0.0730176983668636 0.0712963432925474 0.0800697646798952 0.0762555430491817 0.0721183356119997 5 5 - 17876708 17877175 17876960.182 17876422 17878328 - gene protein_coding_gene TRUE TRUE AT5G44340.1 TUB4 (tubulin beta-4 chain) beta tubulin gene Identical to Tubulin beta-4 chain (Beta-4 tubulin) (TUBB4) [Arabidopsis Thaliana] (GB:P24636;GB:Q9FKV4); similar to TUB7 (tubulin beta-7 chain) [Arabidopsis thaliana] (TAIR:AT2G29550.1); similar to TUB6 (BETA-6 TUBULIN) [Arabidopsis thaliana] (TAIR:AT5G12250.1); similar to TUB9 (tubulin beta-9 chain), structural molecule [Arabidopsis thaliana] (TAIR:AT4G20890.1); similar to beta-tubulin (GB:AAA32757.1); similar to Tubulin/FtsZ family, GTPase domain, putative [Medicago truncatula] (GB:ABE90057.1); similar to Tubulin beta-3 chain (Beta-3 tubulin) (GB:Q40665); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) 0.411272202314963 4.6079983757295 0.000835421029224444 0.0138779729984389 7.57604454693447 22.6130288467113 0.411272202314963 0.0664819377885435 AT5G17930_at 3.37241263357325 3.76615130725212 4.27863275491124 4.50596048378281 4.81194624653923 3.76623075733859 4.20462405044974 4.00304228509317 3.08337709207051 3.47358047190507 4.01447443046998 5.30491616852763 4.12995616744467 3.95582334964655 4.26715089337251 4.49964510229859 3.89633787993399 4.04444648635125 3.69928667593395 0.242606045675498 0.240173748966700 0.239494777934180 0.241279431040329 0.235416533662083 0.242409570573953 0.23953958694394 0.237804392129771 0.257154856463511 0.243852243256096 0.236576623899483 0.235416533662083 0.238249113802602 0.244027193375784 0.243182759652353 0.235416533662083 0.260446625753533 0.255703832617083 0.236998869641764 5 5 - 5940261 5940763 5940421.909 5940000 5944432 - gene protein_coding_gene TRUE TRUE AT5G17930.1 RNA binding similar to MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G80930.1); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE81638.1); contains InterPro domain Initiation factor eIF-4 gamma, middle; (InterPro:IPR003890); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) 0.674740360668351 4.60429841364059 0.000840350616748221 0.0139545165055857 7.57015740797793 7.93004600973026 0.674740360668351 0.200389838277150 AT5G01850_at 6.77744765042327 6.86411400385043 6.56905845114953 7.18841884881765 5.27462992554523 5.37788886328749 3.78120892755726 4.36484760697804 3.30882968262855 3.4437596260928 3.52703776413941 3.73687183995993 3.50129862153169 3.86824895350631 3.46825728814958 3.96466062036445 3.50871134602809 4.05453890186274 2.97699383805236 0.236267014920771 0.23647810747156 0.246283538041661 0.240709753070476 0.239423383702174 0.237881137009037 0.231125697959205 0.238690835147753 0.233707451766642 0.241453760551583 0.233605669682661 0.231125697959205 0.243678598334045 0.249250127781581 0.235156723654006 0.233514610632020 0.248323371918713 0.232930071249769 0.231125697959205 5 0|5 /|+ 333456 334055 333780.111 332334 334467 + gene protein_coding_gene TRUE TRUE AT5G01850.1 protein kinase, putative similar to ATN1, kinase/ protein threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT3G27560.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06441.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.5580516298413 4.60268755320612 0.00084250640186293 0.0139849584165699 7.56759371596883 9.24815055930145 0.5580516298413 0.149109955466578 AT5G52980_at 4.15773715427462 5.0504827285494 4.62526909490038 5.52677357439696 4.86017498459524 4.41788468884528 4.03389863868894 4.0235016857101 3.77318886276298 2.69791240789073 4.28813761240720 4.49355069525161 4.28419535373035 4.25315013211703 4.02466839681322 3.95974243716062 3.78406390863913 4.02709921068378 3.05954711262566 0.245701415956273 0.241380672790172 0.256587831499772 0.255412732742923 0.24461397043807 0.258906804743485 0.256766291915088 0.250599746504073 0.247918792626239 0.243441072009049 0.241605671262686 0.250081863695082 0.241590434157680 0.24350604894453 0.255147075588401 0.241380672790172 0.258859188040958 0.243277330971554 0.242043634426314 5 5 - 21499563 21500752 21500176.818 21499386 21500948 - gene protein_coding_gene TRUE TRUE AT5G52980.1 similar to Os02g0225300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046340.1) 0.751781853901304 4.59779156548977 0.000849094500457102 0.0140889218661619 7.55979951194406 8.24506970013353 0.751781853901304 0.232527376170431 AT5G61970_at 7.8660188945876 8.0413119083523 8.53866551011428 8.23968004687373 8.62930433281947 8.25561326433255 8.03587361396255 8.07552354989774 7.77786952457268 7.0280001115165 8.0582154832224 8.02959506953057 7.8429784350977 7.48891353783051 7.74007855044716 7.69832853215282 7.32987490442722 7.51208338949544 6.91490645508764 0.224075169012394 0.217421551599045 0.229818564161163 0.229075182064955 0.217421551599045 0.235747305232999 0.220704800270747 0.225158618219072 0.233765436680945 0.234168961130584 0.22467665533849 0.220604013250120 0.218097173284432 0.230815523588900 0.222960131992943 0.220864517456353 0.236018860985607 0.221591801733905 0.219247927057878 5 5|0 +|/ 24908970 24910277 24909789.6 24905843 24910554 + gene protein_coding_gene TRUE TRUE AT5G61970.1 signal recognition particle-related / SRP-related similar to PREDICTED: similar to signal recognition particle 68kDa isoform 1 [Bos taurus] (GB:XP_582620.2); similar to Os08g0323000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061540.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.44169179377575 4.59156418060526 0.00085755275774751 0.0142238252169710 7.54988096614807 15.6866324825347 0.44169179377575 0.0884675143398053 AT5G52390_at 4.49646446406767 3.95145298272759 3.66099484559415 4.51916995557382 4.24040360596400 3.57942738110131 1.15878096397161 1.08996495576987 1.08498201983700 1.41569134733587 1.03582922861474 0.841544508884862 1.90266272900606 1.26310182085674 1.22356595764075 1.54113045454246 1.29257516530449 1.20700546374650 1.16644661246326 0.263486163514194 0.263150802302096 0.288998049224565 0.272017530836547 0.264566424794364 0.254774065693837 0.249248891382166 0.252422559590361 0.255531233906557 0.249248891382166 0.250835962800526 0.250527960326565 0.253000282566399 0.249248891382166 0.249248891382166 0.255908115320665 0.24980490336859 0.256971673731922 0.249583348172645 5 5 - 21281525 21282341 21281855.909 21281162 21282490 - gene protein_coding_gene TRUE TRUE AT5G52390.1 photoassimilate-responsive protein, putative similar to photoassimilate-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G54040.1); similar to PAR-1c [Nicotiana tabacum] (GB:CAA58732.1); contains InterPro domain PAR1; (InterPro:IPR009489) 0.695943347476667 4.58934129832084 0.000860593440973173 0.0142644877519460 7.54633920973795 4.59248251565623 0.695943347476667 0.210183224511082 AT5G41760_at 5.11166819551363 5.59112833490219 5.73793287486608 5.68349587161592 7.31289292895377 6.22252910393649 6.60971475535133 6.30285104572697 6.06454709965813 5.44641202572589 7.06660628226097 7.40383041034819 6.73446846065992 6.89682629050614 7.18625798457454 6.5891877763587 5.85737288433309 6.64301548037582 5.6694239334863 0.243542793323036 0.236930001462227 0.237675451422898 0.239865123894049 0.240817219661761 0.248396239635294 0.241996051053493 0.233748420261325 0.24690769993591 0.239024591855197 0.240063429765213 0.236510699597243 0.233748420261325 0.237865738195711 0.238275167984732 0.233748420261325 0.269093597487383 0.237928294695394 0.234066339705133 5 5|0 +|/ 16725567 16726354 16726024.1 16724114 16727137 + gene protein_coding_gene TRUE TRUE AT5G41760.1|AT5G41760.2 nucleotide-sugar transporter family protein|nucleotide-sugar transporter similar to nucleotide-sugar transporter [Arabidopsis thaliana] (TAIR:AT2G43240.1); similar to Os07g0573700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060069.1); similar to Os06g0523400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057753.1); similar to Predicted UDP-galactose transporter (ISS) [Ostreococcus tauri] (GB:CAL52633.1); contains InterPro domain UDP-galactose transporter; (InterPro:IPR004689); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271) 0.702886727594965 4.58929105808655 0.000860662295919695 0.0142644877519460 7.54625915318984 12.3335216634253 0.702886727594965 0.213068456743177 AT5G03650_at 9.29768888207537 9.13401934829717 9.84038655683447 9.69506377901117 10.1191754104037 9.53190232124895 10.0357248254157 9.71206906690112 9.49305327791928 9.94745277530744 10.3603291584712 10.5914058906130 10.6064099896302 10.5504958341859 10.2353313741354 10.7749846168233 10.5575684308901 10.5207071326078 9.88244880165016 0.106788539534233 0.110502297437147 0.105250009515107 0.112301475881103 0.105531091092066 0.122227663045112 0.100904970791194 0.106853082957588 0.120920295580332 0.105962626349358 0.107346877211170 0.100921460104141 0.103858804039238 0.108012299987312 0.106118072852024 0.100904970791194 0.101086044662234 0.103399312199142 0.105505624497023 5 5 + 936640 937415 937000.182 931937 937640 + gene protein_coding_gene TRUE TRUE AT5G03650.1 SBE2.2 (STARCH BRANCHING ENZYME 2.2) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. similar to SBE2.1 (STARCH BRANCHING ENZYME 2.1), 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana] (TAIR:AT2G36390.1); similar to starch branching enzyme I [Pisum sativum] (GB:CAA56319.1); similar to starch branching enzyme II [Solanum tuberosum] (GB:CAB40747.1); similar to starch branching enzyme class II (GB:AAB03100.1); contains InterPro domain Alpha amylase, catalytic subdomain; (InterPro:IPR006589); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193) 0.501046127331444 4.5876830098843 0.000862869220709116 0.0142956003132425 7.54369658394766 19.8202399429627 0.501046127331444 0.122067852854809 AT5G47560_at 9.90069098161555 10.0588301580789 11.177309893976 11.2870124973450 11.0764938378498 11.0833782506768 11.0694646433379 11.2464986269630 10.2866857076392 10.5834441456496 10.5113668985808 10.1379647519822 11.1276890285733 10.8695923220032 9.54279837862976 10.8625960788286 11.2756872203849 10.498090611076 10.3877308720251 0.0885263396882498 0.0816451773677248 0.08080444584377 0.0790286675924335 0.082246779515619 0.0803416247866157 0.0872038319278345 0.0836984465005862 0.0878193226978059 0.080150614761989 0.084489809609138 0.0823845668466632 0.0805794896080633 0.0857859630549427 0.0870976371124267 0.078599527788339 0.0882201864222183 0.0850779951263409 0.0800355404856418 5 5|0 -|/ 19305271 19305717 19305503.8 19304595 19307691 - gene protein_coding_gene TRUE TRUE AT5G47560.1 ATSDAT/ATTDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transporter/ sodium:dicarboxylate symporter Encodes a tonoplast malate/fumarate transporter. Identical to Tonoplast dicarboxylate transporter (AttDT) (Vacuolar malate transporter) (Sodium-dicarboxylate cotransporter-like) (AtSDAT) (TDT) [Arabidopsis Thaliana] (GB:Q8LG88;GB:Q9FEH9;GB:Q9FGK1;GB:Q9MAW4); similar to vacuolar citrate/H+ symporter [Citrus sinensis] (GB:ABK27327.1); similar to sodium-dicarboxylate cotransporter, putative [Brassica oleracea] (GB:ABD64997.1); similar to sodium/dicarboxylic cotransporter, putative [Brassica oleracea] (GB:ABD64928.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) 0.385556885141216 4.58549822397747 0.00086587724268331 0.0143399562278267 7.54021435689032 21.3737148960780 0.385556885141216 0.0452699512413222 AT5G57345_at 11.1347553883854 11.3303981979442 11.9744891366484 11.8440780104626 11.7733828127145 11.5631993201577 12.3229151319538 12.1298801459172 11.3175703897628 11.7311746172529 12.4333227225644 12.5181958173939 12.1151181701871 12.1326608391546 12.4851002265136 12.1232361965987 12.2200657453834 12.191345580395 11.5292873050928 0.0747889670116656 0.0741081463665825 0.0783166521563764 0.0741081463665825 0.0764431197982415 0.0800580793656348 0.0756231564547547 0.0745359726603999 0.0854177697832914 0.0762188140376298 0.0772204136099281 0.0743056457938426 0.0758886921467044 0.0807133327271793 0.0775834609686599 0.0741081463665825 0.075425201768238 0.0773125354839589 0.0755238421845153 5 5|0 -|/ 23246830 23247711 23247301.2 23246633 23247864 - gene protein_coding_gene TRUE TRUE AT5G57345.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54520.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83998.1); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.40533499775833 4.57694153310306 0.000877765025477889 0.0145312815117535 7.52656988619872 23.6608329845113 0.40533499775833 0.0639887672666342 AT5G28750_at 10.5623303473029 10.7067883188760 11.0660004742604 11.0973594311944 11.1549069526652 10.9453828326598 11.0809496459105 11.1337615710318 10.7917018014532 11.1231191308479 11.7494112610288 11.7818133771549 11.4047702158667 11.5303123156477 11.7847342770839 11.7648957260772 11.2511380186813 11.3789674835161 11.1058697924794 0.0861292142037983 0.082811364433475 0.0859108491930264 0.0865341139040193 0.082811364433475 0.085299191893916 0.083468497198106 0.083584870424695 0.0935659696247369 0.0830258648252564 0.0857619582110598 0.082811364433475 0.0837496997366499 0.0870953793992582 0.082811364433475 0.082811364433475 0.0908272062769652 0.0850968456051687 0.0833199179676879 5 5 - 10784154 10785551 10785015.091 10783987 10785726 - gene protein_coding_gene TRUE TRUE AT5G28750.1 thylakoid assembly protein, putative similar to HCF106 (High chlorophyll fluorescence 106) [Arabidopsis thaliana] (TAIR:AT5G52440.1); similar to Tha4 protein [Pisum sativum] (GB:AAD33943.1); contains InterPro domain Bacterial sec-independent translocation protein mttA/Hcf106; (InterPro:IPR003369); contains InterPro domain Twin-arginine translocation protein TatA/E; (InterPro:IPR006312); contains InterPro domain Twin-arginine translocation protein TatB; (InterPro:IPR003998) 0.384406689018271 4.57141662654165 0.000885532108388265 0.0146542691527580 7.51775450817162 22.2622610680588 0.384406689018271 0.0453062748409224 AT5G05480_at 4.94162761389644 5.85250821678694 5.29562366300521 5.46631237869303 6.90996875775416 6.84694889299403 4.97563325437891 5.23385446524023 5.43489897499798 5.23718490573321 5.72036348048857 5.89723172291867 5.4307160002549 5.75629445129291 5.58645120104448 6.04788592011528 5.60428606587739 5.71338992812809 5.56704097085027 0.224494485732749 0.226511726080853 0.240188858971648 0.231201706785597 0.22968707264726 0.235396409403300 0.222629182977718 0.222560467832003 0.234676320449768 0.228767589644103 0.222560467832003 0.222560467832003 0.228381444660855 0.228359848229545 0.225535150919833 0.223408715950392 0.226386972045982 0.222560467832003 0.230454884777334 5 5 - 1622384 1622754 1622555.182 1622173 1624271 - gene protein_coding_gene TRUE TRUE AT5G05480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14920.1); similar to Os05g0395000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055461.1); similar to Peptide-N4-(N-acetyl-beta-glucosaminyl)aspara (GB:P81898) 0.592671632303593 4.57008062030054 0.000887421166700153 0.0146799272961317 7.51562218292342 11.2566191370730 0.592671632303593 0.166841911404314 AT5G42100_at 6.38611147306511 6.9160939746478 7.28852669762308 7.43843968904218 7.01110676534483 7.6830198750084 7.31466595896286 8.03706586793481 7.51348936124077 7.56360042218772 8.97467714532141 8.91058371142413 9.04650491444312 9.06293075233797 8.4639212434342 8.94269296225142 8.49671226666795 8.38512534509599 7.91117344660026 0.168549085226180 0.160837157480835 0.154159914497981 0.153510783428749 0.162627855629198 0.162529188363566 0.160728111616462 0.163604408081515 0.178834626524806 0.164348781508769 0.159359653059858 0.161227269267362 0.165693895580625 0.167434490029545 0.174369549282204 0.166464248006055 0.161234831777396 0.177658466431129 0.159850869207309 5 5 - 16846716 16847678 16847349.273 16846379 16848467 - gene protein_coding_gene TRUE TRUE AT5G42100.1|AT5G42100.2 glycosyl hydrolase family 17 protein encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd Identical to Putative glucan endo-1,3-beta-glucosidase 10 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 10) ((1->3)-beta-glucanase 10) (Beta-1,3-endoglucanase 10) (Beta-1,3-glucanase 10) [Arabidopsis Thaliana] (GB:Q9FHX5;GB:Q3E8I9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G32860.1); similar to hypothetical protein - potato (GB:S31196); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 0.657214035357208 4.56255190853919 0.000898146197038921 0.0148516768257548 7.5036014211486 15.4834527640194 0.657214035357208 0.195535245934383 AT5G67280_at 6.7565362877242 6.9714759281817 6.92576732468478 6.96068802335892 7.57838255853312 7.78713294166829 8.00664522456517 8.25301995834358 7.32166268087013 7.93569598159612 8.57337542084666 9.52029431487857 8.41570383522176 8.81300127535511 8.71476486123738 8.85166480858462 7.86608413758895 8.5181127137421 7.7228391744548 0.160294390866446 0.158924279451409 0.160406164947318 0.156308045665816 0.148483490962553 0.15654145211949 0.148483490962553 0.154682849196017 0.171673090635666 0.156747276274764 0.148483490962553 0.156380609706912 0.157519351387567 0.155844400707786 0.156990363767978 0.151202435966264 0.162607304426703 0.158521654803143 0.148483490962553 5 5 - 26859661 26860208 26859935.273 26859496 26862416 - gene protein_coding_gene TRUE TRUE AT5G67280.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G37250.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G23300.1); similar to Os06g0638500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058153.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91521.1); similar to Os09g0110100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062569.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.40756629382458 4.55319337628082 0.000911668746129559 0.0150695373188241 7.4886481816702 15.5645515891686 0.40756629382458 0.0674015672265128 AT5G59900_at 2.00468071864942 2.28850881243328 2.55913448497966 2.50490664246772 2.49987028825139 2.42626922109054 2.23553464692731 2.33389041493585 2.30147459455993 2.07950582291877 2.64036906793377 3.23206480106034 2.25762634250713 2.8905649110125 2.88867780175045 2.61256190419044 2.90043495298362 2.18758448682177 2.21735878511649 0.189985512528706 0.189398953463117 0.196316440781645 0.191314987110213 0.187828810789488 0.200225117799443 0.188936859562801 0.200125033790621 0.194895671400345 0.197787724080491 0.197368571050204 0.193216494611110 0.199232975887847 0.191709488802557 0.194772165098004 0.189088434732927 0.207906224060540 0.196673796041697 0.188889471428806 5 5 - 24141457 24141762 24141596.182 24141209 24143932 - gene protein_coding_gene TRUE TRUE AT5G59900.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G55840.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB44054.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); similar to Os01g0153200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042052.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.391840321814152 4.55161031031794 0.000913977330736467 0.0151019398369331 7.486117538049 4.80694037091568 0.391840321814152 0.054337516510206 AT5G14440_at 6.77965786734206 6.86453767980044 7.36937283820941 7.31203426600989 7.8901538243588 7.3145855650533 6.86002961961545 7.06079491680702 7.21283689360509 7.04507369937905 7.60937830024085 7.79505677885301 7.39982320888465 7.78867196695531 7.33696724368734 7.52212345020302 7.11807028464139 7.19514394736153 7.0842464406786 0.155548676178011 0.164083761016155 0.159115024712534 0.150241178352099 0.155459329051721 0.168522099590638 0.157400505196136 0.161614232611694 0.153766449802685 0.154040939403388 0.165187424326017 0.159176017908627 0.151164504258198 0.163959479590824 0.159092305019120 0.155850820157788 0.154473911175159 0.149337453061996 0.158385113395783 5 5|0 -|/ 4656073 4657160 4656638.111 4655906 4657910 - gene protein_coding_gene TRUE TRUE AT5G14440.1|AT5G14440.2 similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to hypothetical protein DDBDRAFT_0206414 [Dictyostelium discoideum AX4] (GB:XP_641279.1); similar to OSIGBa0158F13.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66876.1); similar to Os04g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053101.1); contains InterPro domain Surfeit locus 2; (InterPro:IPR008833)|similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to hypothetical protein DDBDRAFT_0206414 [Dictyostelium discoideum AX4] (GB:XP_641279.1); similar to Os04g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053101.1); similar to OSJNBa0044K18.33 [Oryza sativa (japonica cultivar-group)] (GB:CAE05892.1); contains InterPro domain Surfeit locus 2; (InterPro:IPR008833) 0.468441827782875 4.54547037332821 0.000922989663781222 0.0152450436501204 7.47629915640347 14.4737491932284 0.468441827782875 0.106969316706116 AT5G35620_at 7.55140603722877 7.27939588750836 7.73717598096892 7.91082058812003 7.8839217315445 7.76642002348373 7.49136930127233 7.62032152845779 7.73828869080188 7.27390053471879 8.08510304314944 8.11136859811573 7.76703058479388 7.852228545978 8.1985612864654 7.74177953056545 7.47122185694887 7.92556607357136 7.27688029901828 0.125154917866867 0.125553207334529 0.137796255120922 0.125679969372071 0.128967244176404 0.134035764735929 0.128155380722410 0.128511056451206 0.128580405888991 0.12657909696634 0.125439866629364 0.125099776145048 0.126087871719557 0.12432315713994 0.122558597199104 0.125533832466780 0.145813716140747 0.127921851146139 0.137374878148855 5 5|0 -|/ 13842178 13843532 13843103.1 13841935 13843621 - gene protein_coding_gene TRUE TRUE AT5G35620.1|AT5G35620.2 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES); RNA binding / translation initiation factor Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. Identical to Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) (EIF4E2) [Arabidopsis Thaliana] (GB:O04663;GB:Q9SAN8); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to eukaryotic initiation factor 4E [Capsicum annuum] (GB:AAY62607.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040)|Identical to Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) (EIF4E2) [Arabidopsis Thaliana] (GB:O04663;GB:Q9SAN8); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to eukaryotic initiation factor iso4E [Nicotiana tabacum] (GB:AAU06579.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) 0.401689495424005 4.54281761912717 0.0009269123675783 0.0153040049509496 7.47205553376257 15.3170025255538 0.401689495424005 0.0634847205929152 AT5G19260_at 4.56342526064805 4.68911890373661 5.56167267832461 5.69326978895882 5.48596589851508 6.05257908090073 5.7428779032288 6.51505106007759 5.04531670914822 5.05647557006733 5.54187969405629 6.82779348948879 6.01586792439005 5.47542852325569 6.39755180374265 5.79591817870623 5.79216133473407 5.76361997668665 5.15494821368085 0.216829640239339 0.194283180638481 0.193423850459104 0.188428476236310 0.193261893725588 0.189921345652654 0.194807571985285 0.199622366063633 0.188561656788473 0.207469057474072 0.191979289590703 0.194512022425274 0.189930119000582 0.189967572611378 0.202379715369013 0.188390564503875 0.213232968772271 0.200913083870163 0.200225049555895 5 5 - 6479703 6480050 6479850.364 6479402 6480448 - gene protein_coding_gene TRUE TRUE AT5G19260.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06020.1); similar to hypothetical protein 12 [Plantago major] (GB:CAJ34820.1) 0.593225515542898 4.54246194732524 0.000927439644108196 0.0153068817018121 7.47148649067907 11.0564239617645 0.593225515542898 0.168709976747485 AT5G66190_at 11.8954489277684 12.0602102759182 12.5318271686520 12.4527532815729 12.5286349094042 12.3629604788534 12.6268939453403 12.4728645564811 12.4436169365898 12.8307480574821 13.3245273100931 13.3054815117514 13.1484442782772 13.0631819093594 13.3263585422580 13.2994423924538 13.0692789959639 13.2412995764725 12.6905470475922 0.0592035625415037 0.0569404588298338 0.0559046113523852 0.0567496790768734 0.0566161108570503 0.0594028477757793 0.0572175039855975 0.0591284156761276 0.0708349445746091 0.0599306821519813 0.0590845848644372 0.056261472358501 0.0579339770195792 0.061573734766973 0.0598743206512169 0.0559046113523852 0.0599677271465025 0.0629416346571119 0.058669718841191 5 5|0 -|/ 26468756 26469420 26469052.625 26468190 26470425 - gene protein_coding_gene TRUE TRUE AT5G66190.1|AT5G66190.2 ATLFNR1 (LEAF FNR 1); NADPH dehydrogenase/ oxidoreductase|ATLFNR1 (LEAF FNR 1) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. similar to ATLFNR2 (LEAF FNR 2), NADPH dehydrogenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G20020.1); similar to Ferredoxin--NADP reductase, chloroplast precursor (FNR) (GB:P41346); contains InterPro domain Ferredoxin--NADP reductase; (InterPro:IPR012146); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709)|similar to ATLFNR2 (LEAF FNR 2) [Arabidopsis thaliana] (TAIR:AT1G20020.3); similar to Ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor (FNR) (GB:P10933); similar to Chain A, Wild-Type Pea Fnr (GB:1QG0); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) 0.386235333633795 4.53532594472636 0.00093808569794025 0.0154708106599866 7.46006586432154 25.3050604405655 0.386235333633795 0.0503265013353202 AT5G65970_at 1.47672978663009 1.32738730784368 1.86847013346926 1.59047306683245 2.02905412790593 2.07486130235064 1.38078276893136 1.19210226866931 1.24263473771983 1.85913361275694 1.90063281960002 2.29006931914050 1.55815572371002 1.35490207887930 2.36394885162375 1.39113427765697 1.57145878927871 1.68048964682272 1.42006419659239 0.208432176498382 0.205189989574545 0.215254873904867 0.219189384593124 0.210821502551666 0.208939541651063 0.210930721072059 0.208999104579072 0.205328742920986 0.203851023944985 0.204955552612629 0.204523000673001 0.208835726750139 0.203851023944985 0.206958751761553 0.208803550438729 0.215740367554114 0.210645352654091 0.210553332329553 5 0|5 /|- 26404765 26405589 26405104.375 26404654 26407678 - gene protein_coding_gene TRUE TRUE AT5G65970.1 MLO10 (MILDEW RESISTANCE LOCUS O 10); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s Identical to MLO-like protein 10 (AtMlo10) (MLO10) [Arabidopsis Thaliana] (GB:Q9FKY5); similar to MLO8 (MILDEW RESISTANCE LOCUS O 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G17480.1); similar to ATMLO7/MLO7 (MILDEW RESISTANCE LOCUS O 7), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G17430.1); similar to Mlo-related protein [Medicago truncatula] (GB:ABE78077.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 0.401517773635119 4.53200240329366 0.000943087908847854 0.0155473927913391 7.45474441278661 3.25304582234345 0.401517773635119 0.0641200045679031 AT5G50920_at 12.6548632984467 12.8893920075099 13.2704670866626 13.4024748244139 13.3002370823836 13.1180901496090 13.0279475556529 13.0832671034664 12.9172244245347 13.3196871025158 13.5301828902671 13.4372524096964 13.6176504406132 13.556352479875 13.3902892756247 13.7580640885311 13.4113753226967 13.6202817675397 13.1026714008985 0.0728412259720539 0.071924124148151 0.0744290006462396 0.0729582432564273 0.0718491489663666 0.0776016154993809 0.0729585359888535 0.0731690396406971 0.0828152051917178 0.0715665304358639 0.0739826262753558 0.0722500356418692 0.0715665304358639 0.0737142310956364 0.0733494704676716 0.0715665304358639 0.0807322032598977 0.0720866505159248 0.0716264463081748 5 5 - 20732939 20733460 20733171.545 20732695 20737600 - gene protein_coding_gene TRUE TRUE AT5G50920.1 CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. similar to ATCLPC (CASEINOLYTIC PROTEASE C), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G48870.1); similar to APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G15450.1); similar to ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G51070.1); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (GB:P46523); similar to ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor (GB:P35100); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor (GB:P31542); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Clp, N terminal; (InterPro:IPR004176); contains InterPro domain UvrB/UvrC protein; (InterPro:IPR001943); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.39296828476872 4.52997714079239 0.000946149876984283 0.0155919427518061 7.45150094610457 26.4200300853540 0.39296828476872 0.0570470481644238 AT5G05210_at 5.29158980224619 5.41980958873539 6.26320134388665 6.31988877817373 6.27732881626199 6.08099513073814 5.85825838925392 5.09984474886712 5.70315542320481 5.07833267515725 5.89789168439601 6.0316595489546 5.85520673001599 5.68021753744671 5.55113387384132 6.01732514634282 5.68358919679025 5.46150063693726 5.8393595230477 0.156899472325295 0.153522671131119 0.161145539126155 0.154837264242443 0.158440561789833 0.156935620209522 0.158718046701764 0.159349470519587 0.163991675985161 0.160846906041842 0.157081354674345 0.153949780030529 0.159198412129541 0.16211681476905 0.160381964786301 0.15355314469413 0.154285387593202 0.160087555353782 0.157181506996866 5 5 + 1549048 1549494 1549290.818 1547424 1549792 + gene protein_coding_gene TRUE TRUE AT5G05210.1|AT5G05210.2 nucleolar matrix protein-related similar to nucleolar matrix protein-related [Arabidopsis thaliana] (TAIR:AT2G27750.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71277.1); contains InterPro domain Surfeit locus 6; (InterPro:IPR007019) 0.525005444430086 4.52423198401719 0.000954893050332269 0.0157300459046145 7.44229700589423 11.4826636171757 0.525005444430086 0.137727154844973 AT5G15750_at 6.86958353784905 7.44050373392719 7.25663554259989 7.85335348543875 7.82525067254064 7.08267803603724 7.00925015272503 7.4985624125499 4.77460213907696 4.94130280168304 6.1737676630976 6.42705419965261 6.45600392956479 6.16622581303271 5.68464445621167 6.61614468608331 5.84344922999121 5.75377461875698 5.49220617742033 0.245804922407827 0.243728011531962 0.261716674563962 0.243728011531962 0.243728011531962 0.258832164502046 0.24445674688874 0.249073876991574 0.250994665615222 0.257573030734516 0.250684694880107 0.243728011531962 0.256062484956973 0.251837415671975 0.255830712946527 0.243728011531962 0.270001730757961 0.251626922689337 0.243994157532691 5 5|0 +|/ 5141547 5142618 5142224.6 5141106 5142869 + gene protein_coding_gene TRUE TRUE AT5G15750.1 RNA-binding S4 domain-containing protein similar to hypothetical protein [Cleome spinosa] (GB:ABD96845.1); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) 0.685383588356711 4.52222738486271 0.000957963717234192 0.0157746358958475 7.43908450933786 12.9592289203463 0.685383588356711 0.210021836597091 AT5G47250_at 4.87993499292068 4.99935802231716 4.75258470845621 5.10362524435259 3.66773637338104 3.79361596340614 3.60344147543697 3.18834141022705 3.53021796627631 3.37433078267562 3.9507837668666 4.5175171886126 4.40892287431365 4.41394951360744 4.88589410269593 4.16507413895116 3.34655121526071 4.15927422904143 3.56439548158797 0.211401466573544 0.215660485491625 0.209798174474409 0.213164910646187 0.214585844935075 0.209092849927079 0.215347012090666 0.22310064043487 0.225108712280466 0.226126352446177 0.217634191588918 0.208716460863152 0.208440008250516 0.223613276365293 0.21268028399443 0.208440008250516 0.215083416852194 0.222896979795836 0.22028534051251 5 5 - 19203283 19203688 19203454.273 19203021 19205972 - gene protein_coding_gene TRUE TRUE AT5G47250.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g47250 [Arabidopsis Thaliana] (GB:Q9LVT4); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.451484699497793 4.51895959348146 0.000962991680494777 0.0158514102807831 7.4338464940496 8.1089017515699 0.451484699497793 0.0987541944101337 AT5G40600_at 3.06780526461568 2.96314761006297 3.41900465769325 3.61754558168222 4.18521073765169 3.31418444216439 3.01822828372952 3.66426103100137 2.89751321940649 2.74976554081427 3.86780801490327 3.82525454710409 3.9142225750522 3.35165752764547 3.71380271825372 3.71464945934265 3.46256037885501 2.88702658427269 2.64617412251694 0.210837616915295 0.211511090883686 0.213038327339955 0.211134415847562 0.217116904568626 0.228924616233223 0.213588906376356 0.211936075046309 0.227614444593819 0.212078750826683 0.211165276012504 0.214324326879619 0.212378966883721 0.214265977065447 0.213759289057914 0.212300661622294 0.224557791050878 0.216282449243918 0.21868341012656 5 5 - 16272306 16273199 16272789.091 16272272 16273993 - gene protein_coding_gene TRUE TRUE AT5G40600.1 EMB1875 (EMBRYO DEFECTIVE 1875) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27420.1) 0.64163211943912 4.51675153238979 0.000966404833370322 0.0158993403466529 7.4303063209744 6.5844769610374 0.64163211943912 0.191647148052984 AT5G45430_at 9.90406449558006 9.67172573832369 10.5935412796018 10.3441059450975 10.6385581749313 10.1653082892442 10.3275975301353 10.1377508440238 10.2119831301718 10.1609745182765 10.7715058297888 10.5317310743270 10.8816682962867 10.8315963853845 10.3683000682007 10.9462418013294 10.8269741817427 10.5901771527999 10.2738498651226 0.065554162290832 0.0660470354972553 0.0655731205873161 0.064767395657293 0.0631283250564162 0.0632789422730295 0.0631283250564162 0.0631283250564162 0.0699114367448148 0.0644740233573442 0.0639668276903741 0.0631283250564162 0.0640960557990935 0.0652450268168805 0.0634688311133239 0.064282014061004 0.0680140189845384 0.0641031543647228 0.0655395332732413 5 5|0 +|/ 18428268 18428868 18428521.8 18424615 18429204 + gene protein_coding_gene TRUE TRUE AT5G45430.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G19110.1); similar to Os06g0116100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056617.1); similar to GAMYB-binding protein [Hordeum vulgare subsp. vulgare] (GB:AAO25540.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.464007807205902 4.51660170071514 0.000966636899864843 0.0158993403466529 7.43006607258186 20.6898949637452 0.464007807205902 0.106144246164858 AT5G20600_at 5.37329578149552 5.95436816298891 6.31260694672546 6.51231380447631 6.18675940092115 6.41923186722715 5.44351760837439 5.80128494913821 5.48802314442915 5.27213743179656 5.57881663434138 5.80880995088576 5.94332820673647 5.74215326121465 5.82045999036696 5.87301324627009 5.41847536025983 5.67906460861906 5.53942943132516 0.197915761581687 0.193439427649405 0.195648839549005 0.199682108432407 0.203552012238620 0.211825179223362 0.194656456674046 0.200769982690938 0.212806026381900 0.199605130141631 0.19324964932827 0.192138745440976 0.196242213933876 0.192138745440976 0.198726939177879 0.194099987764322 0.213070492239365 0.198699395648674 0.192876637147889 5 5 - 6966387 6966827 6966628.636 6966180 6968035 - gene protein_coding_gene TRUE TRUE AT5G20600.1 similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87179.1); contains InterPro domain Nucleolar, Nop52; (InterPro:IPR010301) 0.507214933745707 4.51322680892627 0.000971879679255781 0.0159795120757257 7.4246537756716 11.5835282284286 0.507214933745707 0.129452391120525 AT5G52040_at 9.30094194537245 9.35222281262525 10.0115974268654 10.1268287426587 10.2146099901018 9.79303701979802 9.50004900935272 9.591409033805 9.35078131837446 9.61724914606066 9.96766469429407 9.73844474811373 10.0244082250802 9.74567196458566 9.66305481401527 9.8607546565405 9.62616088567073 9.87518581190406 9.76486523769217 0.0978287025562618 0.100473012858920 0.103556805081335 0.100117617785612 0.100584608730770 0.102532441974494 0.100380490351921 0.102267188628045 0.118279876511947 0.100959374769714 0.102926644802496 0.097258694742681 0.100330105372705 0.109679280880342 0.0997003005233118 0.0988854354849192 0.113874570723607 0.109998582636888 0.105510446370147 5 5 + 21149947 21150388 21150143.455 21147546 21150847 + gene protein_coding_gene TRUE TRUE AT5G52040.1|AT5G52040.2 ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Identical to Arginine/serine-rich-splicing factor RSP41 (RSP41) [Arabidopsis Thaliana] (GB:P92966;GB:Q9FJ88); similar to ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35), RNA binding [Arabidopsis thaliana] (TAIR:AT4G25500.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Arginine/serine-rich-splicing factor RSP41 (RSP41) [Arabidopsis Thaliana] (GB:P92966;GB:Q9FJ88); similar to ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35), RNA binding [Arabidopsis thaliana] (TAIR:AT4G25500.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.417699459441788 4.5089666088207 0.000978540565045197 0.0160829304944088 7.41781950440074 19.4314870604397 0.417699459441788 0.077774240572573 AT5G60930_at 1.58273927401972 1.24890842203702 1.94302697050003 1.68090064948155 1.67097539932285 1.47863189303646 1.43321639761590 1.51644381767379 1.83180726179936 2.20077855918325 2.21580533883108 2.90569937182594 2.22020988086727 2.70944172325291 3.30270210652 2.42236854166554 1.95495409430942 2.54107118293189 1.77412035816841 0.214305525988359 0.216068162144004 0.230810403680681 0.215690440874086 0.219230668500425 0.216042407005228 0.220086887829139 0.214699870616495 0.215805714591584 0.215554328174826 0.225661976933125 0.229105493287474 0.216362124048613 0.224739414211377 0.21858437044804 0.219292171841174 0.228811903748641 0.215079676025491 0.219209510403365 5 5|0 -|/ 24532654 24533469 24533118.3 24532624 24539737 - gene protein_coding_gene TRUE TRUE AT5G60930.1 chromosome-associated kinesin, putative similar to KICP-02, microtubule motor [Arabidopsis thaliana] (TAIR:AT3G50240.1); similar to FRA1 (FRAGILE FIBER 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT5G47820.2); similar to Os09g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062580.1); similar to kinesin family member 4A [Xenopus tropicalis] (GB:NP_001006741.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.423259776945225 4.50381145770237 0.000986665083179422 0.016210317140066 7.40954624691672 3.80415548116550 0.423259776945225 0.0819183226399574 AT5G20080_at 8.54839243416945 8.53379530653595 9.10997375222855 8.94947567369328 8.66627066152034 8.23195104673709 8.71968147318341 8.6903537798054 8.4387921587666 8.24142232786131 8.82150174628964 9.0985853388774 8.86113426559572 9.00290925958226 9.22122588159941 8.91110656904928 8.75408745484267 9.10238978907607 8.05990980251853 0.0975684977190013 0.101166715875015 0.101870188440610 0.102713093892207 0.101972915124159 0.113197568074283 0.100951652565923 0.105717555458039 0.108180546495778 0.100363952394939 0.0975006408448766 0.100256968587706 0.0975006408448766 0.0998810836136144 0.0983077409946638 0.0975006408448766 0.108502016719489 0.104257261003052 0.106469254540670 5 0|5 /|+ 6784579 6786311 6785412.667 6782568 6786666 + gene protein_coding_gene TRUE TRUE AT5G20080.1 NADH-cytochrome b5 reductase, putative Identical to NADH-cytochrome b5 reductase-like protein (EC 1.6.2.2) (B5R) [Arabidopsis Thaliana] (GB:P83291;GB:Q8LBD3); similar to ATCBR (NADH:CYTOCHROME B5 REDUCTASE 1) [Arabidopsis thaliana] (TAIR:AT5G17770.1); similar to Flavoprotein pyridine nucleotide cytochrome reductase [Medicago truncatula] (GB:ABE86503.1); contains InterPro domain Oxidoreductase FAD-binding region; (InterPro:IPR008333); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) 0.420635738426586 4.50079565458486 0.000991450904435001 0.0162827752655966 7.40470465747696 17.2903995832323 0.420635738426586 0.0803291249561635 AT5G47620_at 7.878816827554 8.36551812496245 8.97008385167469 8.99218083643374 8.87331327290686 8.90189734867667 8.59078574146504 8.75627924131957 8.66923360778588 9.03861144269344 9.0399124827581 9.30408115416616 9.25283763082655 9.28833941204588 8.87309255568848 9.1584354391716 9.22548591259458 8.93270949668545 8.70159824854655 0.134058052659497 0.129230237088438 0.132144284439049 0.125879856488994 0.120745164774192 0.122394359515375 0.125169204100250 0.130126031502451 0.132758674538643 0.123496877822874 0.125319190405193 0.124689316035340 0.122256518137249 0.126469585055600 0.132441828957536 0.119793018565388 0.131569968843768 0.122057196054059 0.124008372082160 5 5 - 19319922 19320422 19320149.909 19319496 19321963 - gene protein_coding_gene TRUE TRUE AT5G47620.1|AT5G47620.2|AT5G47620.3 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G07810.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64922.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64996.1); similar to hypothetical protein 25.t00002 [Brassica oleracea] (GB:ABD64965.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G07810.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64996.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.433866418873937 4.49857836688357 0.00099498514388166 0.0163346313508446 7.40114422415342 17.6348641690412 0.433866418873937 0.0891813628091163 AT5G17890_at 4.85256794114218 4.95697176454576 5.11707985025331 5.29387631760841 6.24109624956563 5.51985928011159 4.31029330988343 4.09821841861107 5.06072017595021 4.63532133463797 5.10246899227856 5.46022605817637 5.00044299413794 4.74579890669538 4.50572628626983 4.89321393284576 4.49765129399169 4.99952626450853 4.87504600286568 0.237282336538065 0.235353583134094 0.250288465983298 0.237588052105832 0.241908265460708 0.23735747792049 0.238627333446996 0.244815136158994 0.24374957348074 0.247383017431664 0.235094378764314 0.233410713289959 0.235220521843473 0.238012981120415 0.24372873200731 0.237076047540399 0.248138584101459 0.238020021826407 0.239966167914473 5 0|5 /|+ 5922537 5923122 5922908.111 5916972 5923350 + gene protein_coding_gene TRUE TRUE AT5G17890.1 LIM domain-containing protein / disease resistance protein-related similar to SLH1 (sensitive to low humidity 1) [Arabidopsis thaliana] (TAIR:AT5G45260.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os03g0626600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050702.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.516033867900423 4.49648232664195 0.000998338323815125 0.0163817702117344 7.39777787356061 9.92757589759731 0.516033867900423 0.134862297251856 AT5G54290_at 9.10797270168257 9.2198329576448 9.74076561736723 9.69726343345333 10.1238543588635 9.50164563068713 9.67487477160472 9.1671559035155 9.31585676018173 9.4471723772285 9.72171408947936 10.0120581717586 9.7684137039821 9.77346075246853 9.71977986874782 10.1599401543272 10.0547096421845 9.94764297145672 9.176844806894 0.166603067942184 0.165537912916860 0.171250816368387 0.174445443981871 0.162923645725392 0.173578919921297 0.165224229461653 0.160186833778951 0.165253781987321 0.168413556010274 0.152331303927292 0.154167682790277 0.163016340735826 0.158868345388422 0.164121741060434 0.152953974798063 0.167486595054164 0.167414502518938 0.170601704347069 5 5 + 22070111 22071123 22070571 22068263 22071254 + gene protein_coding_gene TRUE TRUE AT5G54290.1 cytochrome c biogenesis protein family similar to c-type cytochrome biogenesis protein [Descurainia sophia] (GB:AAQ95739.1); contains InterPro domain Cytochrome c biogenesis protein, transmembrane region; (InterPro:IPR003834) 0.527423390506714 4.49631148133601 0.000998612160915862 0.0163817702117344 7.39750346084571 19.1331737888867 0.527423390506714 0.140518608216613 AT5G57350_at 11.65532180255 11.6734702426636 12.1884840146703 12.2139410685312 12.3474998123199 12.0246926338026 12.3514288887895 12.1225041741866 11.5881305996873 11.7375781871406 12.2252532951906 12.4051502998639 12.1516084111782 11.7902185638608 11.6166058436260 12.4593929239044 12.2270507392945 12.1794416257901 11.3753313250129 0.0809889828551758 0.0735368128764688 0.0750474056317075 0.0770932386483127 0.0752646308948991 0.074087448175231 0.0750271666148576 0.0740218658220951 0.0827023768509399 0.0792863988063164 0.081101893536338 0.0735368128764688 0.0785245404615054 0.0887129393681748 0.0841180368435214 0.0754029053513406 0.0772741066323396 0.0760823718677182 0.0814262842207367 5 5|0 -|/ 23248438 23249189 23248867.778 23248105 23253798 - gene protein_coding_gene TRUE TRUE AT5G57350.1 AHA3 (Arabidopsis H(+)-ATPase 3); ATPase member of Plasma membrane H+-ATPase family Identical to ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3) (AHA3) [Arabidopsis Thaliana] (GB:P20431); similar to AHA1 (PLASMA MEMBRANE PROTON ATPASE), ATPase [Arabidopsis thaliana] (TAIR:AT2G18960.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to AHA9 (Arabidopsis H(+)-ATPase 9), hydrogen-exporting ATPase, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G80660.1); similar to Plasma membrane ATPase 4 (Proton pump 4) (GB:Q03194); similar to plasma membrane H+-ATPase [Lycopersicon esculentum] (GB:AAB17186.1); similar to plasma membrane proton pump H+ ATPase (GB:AAA32813.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain Plasma-membrane proton-efflux P-type ATPase; (InterPro:IPR006534); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) 0.403899973754273 4.49356574506321 0.00100302399639507 0.0164479211290621 7.39309270213537 23.9215946214153 0.403899973754273 0.0686982174242896 AT5G14320_at 11.3490591702754 11.3703015568691 11.3904390412555 11.4625335542748 11.8288445773317 11.5995582115497 11.5561690487807 11.5071237987454 11.6337853407961 11.80776471212 12.3951126769783 12.6060327368343 12.0602959063517 12.3185513700583 12.6307732049667 12.3543225373951 12.0586722297295 12.2464131359403 11.6821816653645 0.0939847476070525 0.0909309043029778 0.0933713358333271 0.0961268909292732 0.0923857130474659 0.0972750944310205 0.0919643144638258 0.093992552603298 0.106944169891004 0.092499251228681 0.09107736890051 0.0917554215282167 0.0921795518590936 0.0943390275684002 0.0966093630021105 0.0909552112221006 0.101916014430389 0.099832108499251 0.0917326377338497 5 5 - 4617918 4618750 4618311.182 4617653 4618915 - gene protein_coding_gene TRUE TRUE AT5G14320.1 30S ribosomal protein S13, chloroplast (CS13) Identical to 30S ribosomal protein S13, chloroplast precursor (CS13) (RPS13) [Arabidopsis Thaliana] (GB:P42732;GB:Q9LY97); similar to 30S ribosomal protein S13, chloroplast, putative [Arabidopsis thaliana] (TAIR:AT1G77750.1); similar to putative 30S ribosomal protein S13 [Oryza sativa (japonica cultivar-group)] (GB:AAS07249.1); contains InterPro domain Ribosomal protein S13; (InterPro:IPR001892); contains InterPro domain Ribosomal protein S13-like, H2TH; (InterPro:IPR010979) 0.375270802228429 4.49131908369581 0.00100664919013781 0.0165011272909173 7.38948290106456 23.5288447686563 0.375270802228429 0.0426103077263788 AT5G53860_at 8.86754822631694 8.90517295836607 8.96135009503269 9.00084061839408 9.74980937172846 9.30859395453477 8.96375296241023 9.0569926483864 8.81202592021771 9.33827643949369 9.64341384435284 9.73640840148801 9.46379285934688 9.46968633553242 10.0196904481486 9.58518639650686 9.42746817875424 9.42837896109 9.06147679170299 0.141622041591007 0.129766513669410 0.138030390906345 0.137151998697731 0.128197268621909 0.138393952797011 0.130393431959645 0.129026242281352 0.133284299482804 0.129110477769417 0.136006786360737 0.131815912231137 0.129178496158673 0.131750991952847 0.12804170199584 0.128303152823783 0.136701961141630 0.128490427408333 0.125669560373824 5 5|0 +|/ 21884422 21885574 21885110 21882494 21886068 + gene protein_coding_gene TRUE TRUE AT5G53860.1|AT5G53860.2|AT5G53860.3 EMB2737 (EMBRYO DEFECTIVE 2737) |contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.416470969366804 4.48282711466638 0.00102047689224596 0.0167214709041693 7.37583236093997 18.4354307187082 0.416470969366804 0.0786094605907214 AT5G62760_at 2.11587336877747 2.28536047409570 1.72740908834887 2.29465889345139 3.16436471741868 2.45655745183031 1.93148209028718 1.95660347265205 1.64913421745347 1.47808719830377 2.34176354446397 2.52028523178676 2.45950847573952 2.50482096645048 2.36261294805085 2.51995161551223 1.79291758024041 2.46423482899784 1.60484682125736 0.203155417554126 0.200031442890408 0.21075127913438 0.203872308264991 0.205886133403388 0.208277481291843 0.200031442890408 0.205430466338811 0.205641799609638 0.208474605440876 0.204430890401034 0.202874591127140 0.200031442890408 0.207346764048102 0.200031442890408 0.200521974066916 0.205781979615593 0.207059897022199 0.205294319484187 5 5|0 -|/ 25225461 25226029 25225767.125 25221698 25226734 - gene protein_coding_gene TRUE TRUE AT5G62760.1|AT5G62760.2 nuclear protein ZAP-related similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT1G49490.1); similar to nuclear protein ZAP-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25050.1); contains domain gb def: Similarity to nuclear protein ZAP (PTHR13413:SF3); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540); contains domain FAMILY NOT NAMED (PTHR13413)|similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT1G49490.1); similar to unnamed protein product; contains similarity to nuclear protein ZAP gene_id:MQB2.8-related [Medicago truncatula] (GB:ABE84462.1); contains domain gb def: Similarity to nuclear protein ZAP (PTHR13413:SF3); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540); contains domain FAMILY NOT NAMED (PTHR13413) 0.565911753104803 4.48201105635512 0.00102181619592303 0.0167370912196453 7.3745200641768 4.21559768356277 0.565911753104803 0.159747399376413 AT5G17360_at 1.91867852740364 1.68421241669398 2.21779228963584 2.16440747193805 2.24870341562291 2.25692198359812 1.99699657035497 1.89576955506241 1.88449330633791 1.63441136948815 2.10050594708727 2.36085750425791 2.45519204347252 1.98389084047724 1.82940418017719 2.36364121766008 2.46385411943932 1.88307143414045 1.80517697863944 0.178316968126513 0.172406225182471 0.177016802516311 0.175051074017962 0.176849506177600 0.172989505446256 0.174977272179242 0.168055521737025 0.172702992435874 0.177377560528596 0.176292191280295 0.174451667875908 0.172403071923749 0.169559901890424 0.174180267097445 0.172627670151619 0.180177761913019 0.183000437817102 0.172942166299471 5 5 + 5720635 5721109 5720914.909 5720378 5721661 + gene protein_coding_gene TRUE TRUE AT5G17360.1 similar to ATP dependent DNA ligase family protein [Arabidopsis thaliana] (TAIR:AT1G66730.1); similar to ATP-dependent DNA ligase; DNA repair metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase [Medicago truncatula] (GB:ABE93666.1) 0.376700149418571 4.48121251965294 0.00102312853518595 0.0167522582338002 7.37323585697721 4.02530830161915 0.376700149418571 0.0451731511664043 AT5G04290_at 6.45980705033984 6.05918127787689 6.77424923189985 6.42178785198599 6.76438813884283 6.58663963121279 5.61724812063506 5.27462053338031 6.2995422122716 6.37920878855277 6.4331846189433 6.52448468524749 6.34682092346879 6.77116229552476 6.3619828018843 6.83332023402153 6.40576163859316 6.65149482129765 6.45059545135158 0.165431911278595 0.159482393604959 0.157053844691680 0.162044523779724 0.167378503034105 0.157921456737284 0.174246639863993 0.178327631146161 0.170153278103288 0.163469981837140 0.165153070407704 0.159937543247432 0.157955008396359 0.163725499792626 0.160362343187204 0.155867357515974 0.160943799702928 0.159464881180865 0.167479479614905 5 5 + 1202104 1202613 1202367.636 1196070 1202654 + gene protein_coding_gene TRUE TRUE AT5G04290.1 KOW domain-containing transcription factor family protein similar to KOW domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT4G08350.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU43935.1); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain Bacterial NusG ribosomal protein; (InterPro:IPR003257) 0.474314826453991 4.48078133098335 0.00102383790141630 0.0167575447076550 7.37254238341467 12.703477889404 0.474314826453991 0.113969107178376 AT5G16280_at 6.11130871922026 5.87490054468119 6.80629979429902 6.6664983503399 7.43668811590465 6.6629010875084 7.15261608514179 6.01998791044767 6.37945391504697 6.19076102259642 7.60921890983925 7.56912884576774 6.74199818667591 7.5454428529602 7.3069942580966 7.3817318942033 7.02982104491802 7.07778512323495 6.55472936679391 0.253332525829631 0.253031174806711 0.252852903930474 0.245126936517409 0.24558653789202 0.259862537590211 0.245126936517409 0.257288740917032 0.26053303398699 0.249988572956105 0.247931232602352 0.248251297667688 0.248676478803754 0.250412536969060 0.245126936517409 0.246574850362268 0.249877918197830 0.250353195555114 0.245437727154622 5 5 - 5323393 5324016 5323710.364 5323178 5331348 - gene protein_coding_gene TRUE TRUE AT5G16280.1 binding similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99240.1); similar to Os03g0786900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051493.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.755588613394915 4.47952877305012 0.00102590147478485 0.0167849836514112 7.37052777342494 13.4202733630801 0.755588613394915 0.242092664150853 AT5G66410_at 6.51026730539056 6.57628493269134 6.57650638955978 6.75204803152987 6.42265531240013 7.2251579510524 6.67192959679001 7.09909561792934 6.81467813073087 6.72807942713593 8.3946347752113 8.75003005858036 7.62673476600103 7.57657385082594 8.6097172198172 7.77800237580161 7.1409038402507 7.69094128280338 6.98239519020307 0.194907232174176 0.197852065587232 0.192462751703119 0.187650624270552 0.191409648870109 0.198500917584175 0.191477500598174 0.196102843322395 0.201232143044171 0.186289900714398 0.186289900714398 0.187109541667463 0.194463611507910 0.19620810820642 0.190330555669133 0.186289900714398 0.210160830262579 0.198100383050157 0.187271981180520 5 5|0 +|/ 26537958 26538650 26538310.4 26536996 26538922 + gene protein_coding_gene TRUE TRUE AT5G66410.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50960.1); similar to Thioredoxin domain 2 [Medicago truncatula] (GB:ABE84079.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.566961123203362 4.47519754877978 0.00103307093116664 0.0168959087775759 7.36355982048924 14.1230730690936 0.566961123203362 0.160638590809254 AT5G59000_at 3.02069534636404 3.14039018402515 2.93775066516028 3.45821648691498 3.88057391249097 3.32813728952612 3.25551891583028 3.33260785844227 3.65385964212874 3.32342522985771 4.56328133701072 4.21178118255942 4.0153086912594 4.37385305982913 4.63525316074117 3.99478403782679 3.55596023982577 4.14181525975949 3.1576541480708 0.206112078110214 0.200331067067626 0.212504846053418 0.200587783161577 0.202093988886634 0.213855843445365 0.210298402399833 0.20668218246161 0.213478641826081 0.200331067067626 0.208749237538624 0.204109174876837 0.204830301982247 0.203409748856675 0.214750556687987 0.203700557246647 0.210957141152320 0.203718734551047 0.200331067067626 5 5 + 23836107 23837207 23836775.909 23835980 23837463 + gene protein_coding_gene TRUE TRUE AT5G59000.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G05830.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE88153.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.511029063386692 4.47402736620908 0.00103501696722203 0.0169213532531008 7.3616768307682 7.07664514623788 0.511029063386692 0.13363814649528 AT5G54440_at 6.9390401631722 7.45902184909158 7.39266260997322 7.5852881904017 7.8495739427016 7.6191911283678 7.26634804139267 7.2216685135099 7.39633305600622 7.47946168597479 8.21377036593796 8.33554335354123 7.85291571753191 8.02257638180686 7.75752985733705 7.79858848998709 7.69937195584247 8.17597237372896 7.50573239267235 0.165607578093586 0.163618312388540 0.167155673008864 0.166662818102872 0.162716260191760 0.164654665143203 0.158446842038889 0.168408366079653 0.175784002688227 0.16202359610663 0.171138018735917 0.169024916281651 0.158862411466429 0.168818387453488 0.159748391541221 0.159259811435403 0.175433467206772 0.168356639530505 0.165279143132465 5 5 + 22124208 22124897 22124606.273 22117162 22125059 + gene protein_coding_gene TRUE TRUE AT5G54440.1 binding similar to Os12g0554400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066991.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.455841921574617 4.46995814425857 0.00104181426234592 0.0170260612338556 7.35512744423277 15.1378706082507 0.455841921574617 0.104201050117547 AT5G54770_at 13.4281420303159 13.6590588151257 14.0501722137985 14.0762232954439 13.9575919191065 13.9181426211675 13.8394731943221 13.9688652863850 13.9071662984430 14.1610805628603 14.6051907809285 14.4306044449362 14.5600802397547 14.5648069948823 14.2283931967381 14.4447173460313 14.3893989674386 14.6208348210903 13.9493177666876 0.0543069180086306 0.0551462351132471 0.0571271278858219 0.0542362233441509 0.0568732320964327 0.056326132160781 0.0553943179668812 0.0597837039342198 0.0651605103320672 0.0556188992989815 0.054738965441752 0.0534703863525549 0.0538615237289068 0.05458801619815 0.0539676176320239 0.0531070624955723 0.0590877884994219 0.0552787193402068 0.0598754761988987 5 5 + 22264449 22265054 22264711 22263821 22265558 + gene protein_coding_gene TRUE TRUE AT5G54770.1 THI1 (THIAZOLE REQUIRING) Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. Identical to Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) (THI1) [Arabidopsis Thaliana] (GB:Q38814); similar to Thiazole biosynthetic enzyme, chloroplast precursor (GB:O23787); contains InterPro domain Thiamine biosynthesis Thi4 protein; (InterPro:IPR002922) 0.375648076909991 4.45387559392371 0.00106914216780530 0.0174660895565255 7.32922097421454 28.1053877844441 0.375648076909991 0.0465320085011569 AT5G17560_at 9.4554785373395 9.64914281371967 9.85247363516763 10.0157164724593 10.2383253005627 9.7427599853602 10.3326459283213 10.2233593609679 9.6516591468092 9.51517136517615 10.3022575528925 10.5104042562098 10.2285507907312 10.4556793536209 10.3309439870547 10.4062870879699 10.3010045496594 10.1953711414052 9.33540374131898 0.138814285827792 0.129857140384753 0.141893477636882 0.133826485870961 0.138534419785478 0.137962281091606 0.139108155596109 0.134811176988187 0.140895495858897 0.139386048003658 0.136312614234027 0.133105896987045 0.132699936990259 0.139041500041801 0.138832620218144 0.135939334365796 0.133757455340052 0.139269173331697 0.140795288017079 5 5|0 +|/ 5788488 5789539 5788711.6 5788456 5789925 + gene protein_coding_gene TRUE TRUE AT5G17560.1 BolA-like family protein similar to BolA-like family protein [Arabidopsis thaliana] (TAIR:AT1G55805.1); similar to BolA-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37765.1); contains InterPro domain BolA-like protein; (InterPro:IPR002634) 0.443864888570942 4.45270918876394 0.00107115328182136 0.0174923532725009 7.32734073353247 19.8597662997595 0.443864888570942 0.0981515360887625 AT5G62410_at 2.19373062142779 2.56077092658974 2.75648557189689 3.12825122355102 2.57175151748188 2.85433065395429 2.08578112905943 2.44047444550190 2.51113678230437 2.72409390485474 2.82019071834788 3.50550722148383 2.92522610831634 3.31477225615711 3.83909367467882 3.17106653906416 2.92018438497409 3.08036735163181 2.9922907736059 0.237896956988426 0.236793731512796 0.242862757760604 0.234791609856304 0.244617268910981 0.245339763565054 0.236477646599397 0.240259892610640 0.244617557462368 0.242044853636988 0.238464047169569 0.24217518198678 0.23798398720842 0.250491122760227 0.23458397816934 0.240851912441646 0.231731537397846 0.234017936988909 0.237732756980825 5 5|0 +|/ 25078976 25079577 25079175 25073488 25079851 + gene protein_coding_gene TRUE TRUE AT5G62410.1 SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) SMC2-1 (SMC2) similar to ATSMC2 (Arabidopsis thaliana structural maintenance of chromosome 2) [Arabidopsis thaliana] (TAIR:AT3G47460.1); similar to SMC2 protein [Oryza sativa] (GB:CAD59410.1); similar to PREDICTED: similar to SMC2 protein [Danio rerio] (GB:XP_692088.1); similar to Structural maintenance of chromosome 2 (Chromosome-associated protein E) (Chromosome assembly protein XCAP-E) (GB:P50533); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain SMCs flexible hinge; (InterPro:IPR010935) 0.481029669659861 4.44458749352598 0.00108526754358165 0.0177161719458405 7.31424356377807 5.54372610389291 0.481029669659861 0.11971913668376 AT5G44390_at 2.66273950999138 2.72293913300080 2.65069269627692 2.70940785264267 2.15148458086635 2.17395102165224 2.26480975410994 2.38208101224137 3.09412451207884 2.68234730116562 3.49882144591121 4.23109218791717 3.2805840798001 3.70025285186308 3.65884596482624 3.52421785121329 3.1722299479461 3.58489949882897 2.5525237486596 0.214076626112109 0.212096569399100 0.212473637016957 0.216215708657537 0.212293018852184 0.213866134493324 0.217564448554235 0.222887018377275 0.221980016806617 0.225058186480376 0.221995181492250 0.234163899075849 0.219883747770714 0.218864941385016 0.219149382985606 0.216284008926990 0.219069611472703 0.220652322876759 0.221956591686979 5 5 - 17899559 17900115 17899889.273 17899423 17902231 - gene protein_coding_gene TRUE TRUE AT5G44390.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44380.1); similar to EDA28/MEE23 (embryo sac development arrest 28, maternal effect embryo arrest 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44400.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90048.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) 0.359138905046962 4.44212351527147 0.00108958815321121 0.0177800083504509 7.3102683785482 5.64361311135085 0.359138905046962 0.0252735379740522 AT5G11700_at 8.69534942180759 8.87087877553476 9.07968155111177 9.051666204724 9.70936857822819 9.31168089706619 9.06295199181229 9.2957402047618 9.00284333405621 8.4074303494008 9.50118714730476 9.48859923064633 9.25930972239644 9.19780988821238 9.1201895072482 9.26698481205488 8.92627924364875 9.07849499818587 8.66666333563329 0.143250913019007 0.135651339737220 0.138977703777747 0.145354881645038 0.135651339737220 0.146526139079446 0.138405605741455 0.137779596790823 0.156515405780097 0.14467888421124 0.143579559146882 0.137585390432095 0.138503943289240 0.156346996723854 0.141258094424066 0.135651339737220 0.145527755993227 0.142405514673769 0.137597806161395 5 5 - 3763216 3763890 3763533.273 3762467 3771124 - gene protein_coding_gene TRUE TRUE AT5G11700.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G47020.1); similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT4G32920.1); similar to hypothetical protein MtrDRAFT_AC144766g15v1 [Medicago truncatula] (GB:ABE91983.1); similar to Thiolase [Medicago truncatula] (GB:ABE80802.1); similar to hypothetical protein MtrDRAFT_AC146940g33v1 [Medicago truncatula] (GB:ABE90405.1) 0.422206844159431 4.43647499022016 0.00109956134885948 0.0179360014824991 7.30115245551545 18.0957492823353 0.422206844159431 0.0854724075409885 AT5G05990_at 3.40148604562841 4.19414550546614 4.17327051172562 4.62222467708561 4.24557568976759 4.20114379281501 3.80578505903896 4.21451161403504 2.68456504700599 3.2958675078143 3.93817398317000 4.30665882041038 3.69069929102314 3.5149419216555 4.83990360470088 4.34753296448412 3.9908561725591 3.55086631368979 3.77953521058566 0.241141768404662 0.236085921243178 0.242935299516412 0.236482818916462 0.232416478054736 0.236666601285755 0.232256844802836 0.242769546995038 0.238642195546210 0.232256844802836 0.236037031611592 0.237967209477657 0.232256844802836 0.240347562109141 0.245201445568880 0.236687408708327 0.252344946934765 0.245453623881084 0.234387462059122 5 5|0 -|/ 1806933 1807497 1807195 1806762 1807908 - gene protein_coding_gene TRUE TRUE AT5G05990.1 mitochondrial glycoprotein family protein / MAM33 family protein similar to mitochondrial glycoprotein family protein / MAM33 family protein [Arabidopsis thaliana] (TAIR:AT3G55605.1); similar to Os01g0143800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042000.1); similar to Os01g0143300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041996.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB16469.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428) 0.587851578649643 4.43058209582971 0.00111006844961986 0.0181005830462552 7.2916376423601 7.74515622316043 0.587851578649643 0.172959496696451 AT5G17460_at 2.20633409751049 1.94999884889113 2.65371980874123 2.76620983279866 1.97890891217769 2.36486661284690 2.0458141425645 2.01713713581062 2.08309843714757 1.86463286408900 2.24732644754941 2.38837857351957 2.39866888291639 2.35232168713501 2.51329039310211 2.18996798071675 2.29553642888796 2.24489454856808 1.69413354843923 0.190869920718095 0.198197615021056 0.193152126289108 0.197083048438685 0.204836774478545 0.192829708760053 0.196093022065482 0.187923488297329 0.200303024964826 0.199452480594557 0.188184382865783 0.193720043625769 0.192067872471073 0.198140785223321 0.198979892143827 0.193623717962020 0.193062439483481 0.185875010035712 0.202186459482486 5 5 - 5757670 5758108 5757894.545 5757100 5759721 - gene protein_coding_gene TRUE TRUE AT5G17460.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78854.1) 0.41714086834387 4.42716363326704 0.00111621197575643 0.0181897728837613 7.28611599970251 4.35258354109666 0.41714086834387 0.0826591906396133 AT5G53090_at 2.42355885709654 2.62931758616389 3.17772775656478 3.02713555973434 2.71518073119115 2.73902036539224 2.97859272895615 2.26116839000831 2.26433245259489 3.01129518449141 3.62481302624899 3.82495303959762 2.59882165642779 3.12100875182998 3.96134012343469 3.45892572304083 3.47032630316505 3.89477892434296 3.21952652367966 0.209471698143954 0.203277776185813 0.200813837788058 0.207695447370173 0.200496009007592 0.203665297958206 0.207415592358758 0.203513521121042 0.218132577203830 0.206752530336908 0.202261283529837 0.204072265381154 0.19963865073426 0.200922846835116 0.209824568523324 0.200992481898096 0.205476309450093 0.203008551273429 0.203934449658100 5 5 + 21541768 21542759 21542365.455 21540605 21542923 + gene protein_coding_gene TRUE TRUE AT5G53090.1 oxidoreductase similar to FEY (FOREVER YOUNG), oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G27760.1); similar to forever young oxidoreductase [Solanum bulbocastanum] (GB:AAL60069.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.502129801293372 4.42707189856722 0.00111637732974779 0.0181897728837613 7.2859678047001 5.90700724543824 0.502129801293372 0.131826390705405 AT5G17600_at 5.07497415442154 5.27032908695782 5.88111278963703 6.13169931985684 6.57782347681203 6.63172383505986 5.82962480369722 6.6290081627611 5.80454029994073 5.92618850073031 5.95963545075816 5.85315148912767 6.18205852099688 6.33663721062786 6.18032729826461 6.8165064615536 6.33479004261789 6.24357925971077 5.57907832840948 0.213846719653933 0.192502563877494 0.195698481473088 0.193837345933449 0.198285594399471 0.193610013265947 0.189049652805497 0.193625527422424 0.188474497869403 0.187192412995196 0.187192412995196 0.190261306869671 0.187192412995196 0.193498751832653 0.192014467500144 0.191608598723033 0.202805337386976 0.187192412995196 0.192632746837778 5 5 - 5800039 5800545 5800325.455 5799907 5801246 - gene protein_coding_gene TRUE TRUE AT5G17600.1 zinc finger (C3HC4-type RING finger) family protein Identical to Probable RING-H2 finger protein ATL5G (ATL5G) [Arabidopsis Thaliana] (GB:Q9LF64); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G03550.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE85148.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.536502905197846 4.42417258997717 0.00112161670313538 0.0182629474350268 7.28128347429182 12.0074226668508 0.536502905197846 0.149156271735591 AT5G22540_at 3.31074881412427 3.49460969266706 4.96160847183965 4.43238960988557 3.33134494124635 3.58954558947016 2.12915071116951 2.42260778564523 3.32469043221257 2.4995796684944 2.75915191256374 2.41866365084557 2.28046881566448 2.60877404878665 2.90297466789891 2.64919168970333 2.52094489006109 2.80358674256293 2.89168375660644 0.244754524404055 0.246501870880953 0.273360660750062 0.252381700950185 0.253903696392697 0.251294372137651 0.256138958039647 0.255053560187166 0.245516854258317 0.246545602163131 0.251593301216277 0.244754524404055 0.244754524404055 0.24848915512244 0.244754524404055 0.245507666486621 0.244754524404055 0.246255118011712 0.256583194918226 5 5 - 7481563 7482087 7481820.909 7481481 7482956 - gene protein_coding_gene TRUE TRUE AT5G22540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22550.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45208.1); contains InterPro domain Protein of unknown function DUF247, plant; (InterPro:IPR004158) 0.476047251015973 4.42412066163791 0.00112171077889251 0.0182629474350268 7.28119956502163 6.2206444543553 0.476047251015973 0.118218257299284 AT5G07630_at 6.3701554895514 5.89261630631232 6.06233965978858 5.59298731653386 8.07639472375792 7.17409902277218 6.97752009184117 5.8070069615641 5.85450986665862 5.31778510331533 6.7080841935821 7.35076492333778 6.90373333084571 7.36555392800176 6.51040024518819 7.31853490036528 6.3926846313799 6.46414961648921 5.81419384798312 0.247503939848120 0.233518517664236 0.257148176890223 0.249851158508702 0.227306349677785 0.254134642061022 0.236577802823714 0.226892030753355 0.240563985607651 0.227412429207837 0.235689975143254 0.224956664972345 0.225760139350403 0.228526634002974 0.250291745790418 0.224956664972345 0.244422805746083 0.236941782431004 0.236144436359424 5 5|0 +|/ 2413368 2414311 2413816.889 2412033 2414524 + gene protein_coding_gene TRUE TRUE AT5G07630.1 nuclear division RFT family protein similar to nuclear division RFT1-like protein [Capsella rubella] (GB:AAR15470.1); contains InterPro domain RFT1; (InterPro:IPR007594) 0.839602875112802 4.41897427303418 0.00113107551295907 0.018408505100416 7.27288192076875 12.7635905267491 0.839602875112802 0.280784795163489 AT5G15700_at 3.39313834965549 3.92912186937908 4.38626578928312 4.30978326242451 3.85366368715558 3.81571682612623 3.42174454970661 3.77009847111708 2.67665385707823 2.92181958183961 2.80872155828240 3.56837727361875 3.1562544846985 2.78258048696952 3.22015187872244 3.23572190866964 3.37335570194625 3.47040616732401 2.61564509906020 0.266219234484815 0.277536106521108 0.262502619137815 0.273073309426054 0.262137873027158 0.274162190525982 0.273650406384487 0.273942159254445 0.278542796801734 0.274082177788230 0.271302778845997 0.26499887648831 0.268255555607423 0.272948029813861 0.262580887296526 0.263425237426745 0.281465062852131 0.274937808058963 0.265603894726325 5 5|0 -|/ 5115799 5116605 5116197.7 5115303 5121843 - gene protein_coding_gene TRUE TRUE AT5G15700.1 DNA-directed RNA polymerase (RPOT2) Identical to DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (RPOT2) [Arabidopsis Thaliana] (GB:Q9LFV6;GB:O23644); similar to PDE319/SCA3 (PIGMENT DEFECTIVE 319, SCABRA 3), DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT2G24120.1); similar to DNA-directed RNA polymerase, mitochondrial (RPOMT) [Arabidopsis thaliana] (TAIR:AT1G68990.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96891.1); similar to DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (T7 bacteriophage-type single subunit RNA polymerase 2) (NsRpoT-B) (GB:Q8VWF8); similar to DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor (T7 bacteriophage-type single subunit RNA polymerase 2B) (NictaRpoT2-tom) (GB:Q8L6J3); contains InterPro domain DNA-directed RNA polymerase, bacteriophage type; (InterPro:IPR002092) 0.463369125576194 4.41728034697647 0.00113417586193456 0.0184520375278335 7.27014341610918 6.8299344482001 0.463369125576194 0.111605947250328 AT5G28290_at 3.10167886649624 3.64039417560413 2.35959825181149 2.42665008500187 2.85569235328949 2.09079548831242 2.12095861261395 2.61771975853419 2.57810597913059 2.92204772555584 5.6314689507508 6.17399093310026 3.67482942522066 4.54214771116922 5.47833811692646 3.76974442920149 2.04674373988409 3.83446399649225 2.71326391553914 0.234974448957685 0.234974448957685 0.245324945407384 0.244729516926105 0.238084027794389 0.245311337755353 0.237467291810326 0.236584939342637 0.245704556433705 0.244439062661248 0.241117010928967 0.234974448957685 0.234974448957685 0.251403656109507 0.239329608452126 0.235145385787003 0.262164905574654 0.248316910104465 0.234974448957685 5 5 - 10278949 10279450 10279257.727 10278695 10282618 - gene protein_coding_gene TRUE TRUE AT5G28290.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54510.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G04810.2); similar to LSTK-1-like kinase [Lycopersicon esculentum] (GB:AAL04423.1); similar to NIMA-related protein kinase [Populus tremula x Populus alba] (GB:AAL79042.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.609578115363161 4.41662076695224 0.0011353854910523 0.0184647884969795 7.26907699628177 6.21757184208381 0.609578115363161 0.18367851005572 AT5G41620_at 3.34807919944483 3.78128101140531 4.20241101190065 4.2187278262568 4.33019360518935 4.30684558376592 4.68001856815001 4.24471744191544 3.68049939788081 4.27817877207769 5.02012914282337 5.05557112770833 4.16700799237234 4.50967021941998 4.60593677868239 5.02344010122991 5.07163995993875 4.73377842754181 4.39149503703024 0.2032911135664 0.200251357689703 0.202235466510131 0.201430737707141 0.201034258455016 0.205805655455353 0.203592376076975 0.201767550268576 0.209680681121996 0.198918049718744 0.203025276389048 0.198669489754731 0.205145557693994 0.206141076296863 0.198669489754731 0.199321275529411 0.204565930264914 0.206544561369912 0.203464125013771 5 5 + 16665410 16665977 16665723.636 16663666 16666196 + gene protein_coding_gene TRUE TRUE AT5G41620.1 similar to intracellular protein transport protein USO1-related [Arabidopsis thaliana] (TAIR:AT1G64180.1); similar to unnamed protein product; gb|AAF24581.1 gene_id:MBK23.17 strong similarity to unknown protein [Medicago truncatula] (GB:ABE79740.1) 0.453846383967157 4.4135372552573 0.00114105848920937 0.01855009051379 7.26409076339495 8.58409484152563 0.453846383967157 0.106391644097943 AT5G13290_at 3.09402384980026 3.29315699025249 3.63105918340964 3.69899709971122 4.53660723599514 4.69941646953879 4.09757253411574 4.46505848287751 3.82870225711546 4.28618822331761 4.33760071961581 5.12788833930646 4.40087095503708 4.30594771074898 4.57971526612937 5.01895967394424 4.24322728798448 4.15938951759163 4.20375822637611 0.238932192668163 0.233528479696038 0.243214193859017 0.232806473833774 0.232401111524506 0.236415039516960 0.230896923424025 0.233849202682757 0.249926887651743 0.230720529735487 0.235539725820519 0.234662736472446 0.232054316938742 0.235406674146296 0.232851575538066 0.233790467396269 0.233301501355658 0.241440272497884 0.229001391461798 5 5 - 4252927 4253484 4253181.909 4252845 4254897 - gene protein_coding_gene TRUE TRUE AT5G13290.1|AT5G13290.2|AT5G13290.3 protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G31880.1); similar to receptor-like protein kinase [Nicotiana tabacum] (GB:BAC07504.2); similar to Os01g0927500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045269.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719)|similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G31880.1); similar to receptor-like protein kinase [Nicotiana tabacum] (GB:BAC07504.2); similar to Os01g0927500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045269.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.409775365546946 4.41225441409958 0.00114342741586943 0.0185816347102951 7.26201595948055 8.2534445654115 0.409775365546946 0.0785108285618706 AT5G05630_at 2.09797917624067 2.43934112629084 2.54947136635555 2.99986051274263 3.27273341054866 2.83898821889276 1.89673668680322 2.15984352382572 2.44647807752827 2.22221716501488 2.28898519352376 2.40566414747847 2.74474174219475 2.67048525569204 2.61259829580244 2.85742336525375 2.44258422074302 2.43012456597075 2.30616424708160 0.225526945722920 0.216631827815852 0.220938129013943 0.235591625026619 0.218300686638767 0.223887212551108 0.219466956906622 0.224885853195616 0.234350616039765 0.21573440757773 0.224528853554966 0.21573440757773 0.216722879181789 0.216398470529748 0.218344720057544 0.217592159908716 0.224748502446871 0.222829540859319 0.2196804760228 5 5 + 1683435 1683976 1683748.091 1682322 1684192 + gene protein_coding_gene TRUE TRUE AT5G05630.1 amino acid permease family protein similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31820.1); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.1); similar to putative amino acid permease [Oryza sativa (japonica cultivar-group)] (GB:AAR10855.1); similar to amino acid permease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97257.1); similar to Os03g0576900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050538.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) 0.499205466984455 4.40816544022871 0.00115101279958635 0.0186978952196663 7.25540121011652 4.97263375848282 0.499205466984455 0.131423420406405 AT5G06790_at 1.09255752560520 1.31386324899587 1.74358956749224 2.05367238577523 2.19378675512631 1.93181158751004 2.40989527138889 3.08870344505725 1.90113396421249 1.98408474143799 2.78724948090604 3.20810229935199 2.70283822327053 3.13677723789144 2.3462702477272 3.13485767685667 2.69546119527319 2.36974702738701 1.40146665863771 0.24973931790634 0.241665133317827 0.258701628600088 0.242492220516940 0.240565709240697 0.244779618767891 0.244673371852096 0.249602854332745 0.248595026733814 0.241308823281029 0.241146387587496 0.236814166383742 0.237557246122865 0.251579251090334 0.237835374403626 0.238855799659803 0.248295351799536 0.241957024863615 0.241189931616844 5 5 - 2098259 2098627 2098452.636 2097670 2098741 - gene protein_coding_gene TRUE TRUE AT5G06790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G57950.1); similar to Os09g0279200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062757.1) 0.519947335017214 4.40509543362814 0.00115674268990614 0.0187839379374579 7.25043340371122 4.25843066254175 0.519947335017214 0.142130365614350 AT5G64030_at 8.18603216641605 8.29037218027516 8.47570320268988 8.44307502156943 8.97987933918324 8.50763588534477 8.69678154172101 8.93538746829137 8.36836347589368 8.6182119159472 9.48398971945146 9.60910526293285 9.22951716397639 9.13240069936867 9.57041975493517 9.45510156147688 8.7957406266862 9.09059175201796 8.53910035598903 0.128508699854356 0.125072228795239 0.126334770417386 0.131055201731609 0.124785063552833 0.127385502010842 0.130105849052498 0.128189942416843 0.131944232898828 0.127419364384555 0.124617428532749 0.127454851209764 0.125569159198743 0.127674760826569 0.127655640803418 0.122961192110130 0.128573205667834 0.129166986176935 0.133098873191900 5 5|0 +|/ 25644689 25645457 25645163 25641263 25645701 + gene protein_coding_gene TRUE TRUE AT5G64030.1 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G51070.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G29470.2); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G34300.2); similar to dehydration-responsive protein, putative [Oryza sativa (japonica cultivar-group)] (GB:ABA96619.1); similar to dehydration-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22395.1); similar to ankyrin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82580.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.430864879008328 4.39755601089518 0.00117094200654263 0.0190073967739530 7.2382280539619 17.4665668007942 0.430864879008328 0.0934972732822395 AT5G56540_at 3.20615010219089 3.70714926703501 4.15796153768132 4.04686770715899 3.42562456421782 4.4886419759268 3.54355706995057 3.3941864646134 4.23718220690762 3.76891814302926 4.65969008992531 5.48884035688832 4.23709978146331 4.52683441677793 4.88939303995045 4.94921162095618 4.69106483840029 4.99101735177658 4.16572255075382 0.224652537684182 0.232675929783909 0.2332561156136 0.238152329271145 0.233071722760959 0.231422732074670 0.223490588091159 0.235393906203718 0.224874210126302 0.231304297706526 0.22771319699781 0.232958357941294 0.224053407546817 0.227945720473960 0.243950725409148 0.227789785723049 0.226758303617439 0.22321396880165 0.23460195627406 5 5 + 22910482 22910624 22910537 22910377 22910868 + gene protein_coding_gene TRUE TRUE AT5G56540.1 AGP14 (ARABINOGALACTAN PROTEIN 14) Encodes arabinogalactan protein (AGP14). Identical to Arabinogalactan peptide 14 precursor (AG-peptide 14) (AGP14) [Arabidopsis Thaliana] (GB:Q9LVC0); similar to AGP13 (ARABINOGALACTAN PROTEIN 13) [Arabidopsis thaliana] (TAIR:AT4G26320.1); similar to unknown [Brassica rapa] (GB:ABB97032.1) 0.656941428542914 4.3969917779988 0.00117201199622645 0.019017645408243 7.2373143343171 8.17697645472061 0.656941428542914 0.205903024892748 AT5G38330_at 2.27025130837165 2.45293255313554 3.10824323221704 3.06141777443919 2.81940811936926 3.33618920295054 2.42251876161571 2.21060703651329 2.49831917576006 2.37692903789238 2.58523090697275 1.87727360844255 2.68004935956737 2.82943483889750 2.55755786128365 2.33186923409233 2.84786781627432 2.94643486446684 2.4333358022212 0.182574841492761 0.180704115486452 0.179229271361892 0.190916679907181 0.184217805481427 0.184747374349490 0.181088674137006 0.186618350493480 0.184321004439529 0.183013736704207 0.182920307432199 0.192643854774525 0.179357427291903 0.182868046970226 0.189122594123119 0.188811113118139 0.185804735734497 0.184803475204502 0.184469191040859 5 5 + 15335436 15335647 15335528.273 15334997 15335675 + gene protein_coding_gene TRUE TRUE AT5G38330.1 LCR80 (Low-molecular-weight cysteine-rich 80) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Identical to Putative low-molecular-weight cysteine-rich protein LCR80 precursor (LCR80) [Arabidopsis Thaliana] (GB:P82789); similar to LCR58 (Low-molecular-weight cysteine-rich 58) [Arabidopsis thaliana] (TAIR:AT5G38317.1); similar to hypothetical protein MtrDRAFT_AC135415g34v1 [Medicago truncatula] (GB:ABE81922.1); similar to putative low-molecular-weight cysteine-rich protein lcr19 precursor [Medicago truncatula] (GB:ABD33391.1) 0.444003653313374 4.38992034588683 0.00118550951590376 0.0192294661713078 7.22585931430194 5.2192757401803 0.444003653313374 0.102019258484727 AT5G08050_at 10.4192885019317 10.3016371967301 10.4156331937990 10.4674606993057 10.5954712632921 10.383417861242 11.4623370798009 11.2646250901671 11.0494610778836 10.8773335186082 12.2580690700036 12.4749010035055 11.7274780447974 11.9739140710166 12.4582186578493 11.8645614923936 11.5976549370541 11.7437025978899 10.6546600966085 0.0858915043033112 0.0834413984667302 0.0832976161956361 0.0842063461533661 0.0829597614038087 0.0849494772230555 0.081490630545687 0.083724573221283 0.0968091206450957 0.0871856733589614 0.081490630545687 0.081490630545687 0.0815652521741803 0.0834916654616492 0.0843382900759744 0.081490630545687 0.0823776486292879 0.0922384830157092 0.0863494584821023 5 5 + 2578421 2578927 2578694 2578346 2579164 + gene protein_coding_gene TRUE TRUE AT5G08050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74730.1); similar to Os12g0575000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067105.1); similar to hypothetical protein LOC_Os11g27300 [Oryza sativa (japonica cultivar-group)] (GB:ABA93451.1); contains InterPro domain Protein of unknown function DUF1118; (InterPro:IPR009500) 0.37767568693293 4.38040575157889 0.00120392880858110 0.0195209318905544 7.21043631262542 22.1001325517905 0.37767568693293 0.054884415841041 AT5G54850_at 2.41365947761774 2.10748778726224 2.20365274006613 2.17298492569904 2.24676165834568 2.19455116019428 1.63269239653921 1.90262647376511 2.51779078076976 2.10885682006058 3.04681236325391 3.22810684808551 2.76915218779698 3.02721165003156 2.63801420871062 2.9030411987214 2.44295310577399 3.04571069515338 2.22499408999293 0.195430879938009 0.194820754662655 0.197398092698556 0.197922084200009 0.198231475478928 0.199515112480428 0.20789148496846 0.199795823591163 0.193322582473111 0.202041952244803 0.193322582473111 0.208003414161469 0.1952519571896 0.200989192256514 0.202180040928409 0.193322582473111 0.199583108065793 0.201663439247252 0.202534921810626 5 5 - 22297996 22298511 22298293.909 22297809 22298654 - gene protein_coding_gene TRUE TRUE AT5G54850.1 similar to Os07g0520600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059803.1) 0.397057902931686 4.37870295039101 0.00120725687649039 0.0195675766552993 7.20767485572031 4.69505500033552 0.397057902931686 0.071409316605367 AT5G24020_at 5.516173971415 5.54729903627071 5.76651530986192 5.86210487707738 5.93435360012618 5.59141730316708 5.79487159090178 5.70892681276491 5.53383152306886 5.81230503165962 6.2204000905892 6.57147625424641 6.20115475201386 5.99983183612192 6.9235650605645 6.40309402610043 5.83045177032526 5.86076089356458 5.52754209332736 0.276745721759775 0.276060175534452 0.276060175534452 0.27959889677827 0.284442725412393 0.287524477082988 0.281822523299734 0.282357081646441 0.285112244011589 0.276060175534452 0.276060175534452 0.276060175534452 0.289608265435047 0.276060175534452 0.288345377429567 0.281995484288847 0.282159782123716 0.284244179943066 0.282332431189868 5 5 + 8117247 8117679 8117451.091 8116683 8118033 + gene protein_coding_gene TRUE TRUE AT5G24020.1 MIND (ACCUMULATION AND REPLICATION OF CHLOROPLAST 11) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to plastid division regulator MinD [Solanum tuberosum] (GB:AAZ23778.1); contains InterPro domain Cobyrinic acid a,c-diamide synthase; (InterPro:IPR002586); contains InterPro domain Septum site-determining protein MinD; (InterPro:IPR010223) 0.386781102904433 4.37256654536895 0.00121933071887819 0.0197558876865347 7.19772023398945 11.6531585050945 0.386781102904433 0.0636074049091629 AT5G04240_at 6.58986886885928 6.77010417493017 7.21968746406792 7.27250821743047 7.49059545264648 7.22555919766182 7.18293510070728 6.63259571546462 6.4918487998723 7.08055805664238 7.24823204265515 7.46095630264931 7.54225558265632 7.10455241116033 6.87697237257434 7.67825278083442 6.99903031008422 7.14627481647155 6.98358153685634 0.137229343789004 0.141837803456138 0.137296791630017 0.137070002367712 0.141544541183201 0.141715285399024 0.134511673452178 0.136722311712349 0.146137298441304 0.141939869418527 0.137390787764888 0.136949128454267 0.137570776348012 0.143135056771260 0.138782572864134 0.145340145570333 0.152792149043645 0.147798297613468 0.136497574208971 5 5 + 1174246 1174602 1174424.091 1169545 1174879 + gene protein_coding_gene TRUE TRUE AT5G04240.1 ELF6 (EARLY FLOWERING 6); transcription factor Encodes a jumonji-class transcription factor that acts as a repressor in the photoperiod pathway. similar to REF6 (RELATIVE OF EARLY FLOWERING 6), transcription factor [Arabidopsis thaliana] (TAIR:AT3G48430.1); similar to Transcription factor jumonji, jmjC; Transcription factor jumonji, JmjN; Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE87817.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Transcription factor jumonji, JmjN; (InterPro:IPR003349) 0.456640657111681 4.3700901573487 0.00122423908539650 0.0198280046455467 7.19370159418024 14.1025127532257 0.456640657111681 0.110591605233476 AT5G66040_at 10.7640902302138 10.6109053527603 10.9331486561034 10.9207659877986 11.3320821364599 11.1542790251150 11.0693901604031 11.246847492411 11.1610429063456 11.5017158232006 12.1408640427888 11.9134422528548 12.2474393929745 12.0929256093411 11.8244483805350 11.6631336100345 11.9197641944697 12.2584735405440 11.6108122724262 0.0638147438115012 0.0618741132865156 0.0618208739084631 0.0611377984764776 0.0586476981502308 0.0656475165484836 0.0584562359046057 0.0586604355617705 0.0631453105998982 0.0589000943818599 0.0584562359046057 0.059301305347627 0.0589779390217461 0.0595631889318051 0.0608849921067263 0.0588186123901933 0.0664463955953477 0.0610770112052439 0.0594318777566266 5 5|0 +|/ 26427785 26428313 26428048.556 26427746 26428581 + gene protein_coding_gene TRUE TRUE AT5G66040.1|AT5G66040.2 senescence-associated family protein Identical to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese) (Senescence- associated protein) (Sulfurtransferase protein 16) (AtStr16) (STR16) [Arabidopsis Thaliana] (GB:Q39129;GB:Q9FKX8); similar to SEN1 (DARK INDUCIBLE 1) [Arabidopsis thaliana] (TAIR:AT4G35770.1); similar to Chain A, Solution Structure Of At5g66040, A Putative Protein From Arabidosis Thaliana (GB:1TQ1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) 0.372649176520437 4.36846066274898 0.00122748017751802 0.0198730743419820 7.19105684468767 22.7199811527916 0.372649176520437 0.050962758685876 AT5G54600_at 11.1125341121564 11.0641010674266 11.2991865893988 11.1509382222346 11.8198883506848 11.3963872464179 11.5645559614717 11.3751242971626 11.4487117374445 11.8545206504332 12.5885674542326 12.6028255364606 12.1803009150878 12.2647419945690 12.8040722406713 12.3168006264398 11.9459339064913 12.1941505600387 11.7118322780897 0.0937877366935596 0.0900701481476924 0.094170751905595 0.0918010257625293 0.0914644854969879 0.101009888795994 0.0917388992468937 0.0915477978706067 0.097282004771584 0.0942297669618046 0.0908446163714789 0.0894202979154977 0.0935518965214346 0.0916009699679238 0.0899497134126985 0.0889843084166535 0.094723334654399 0.0929352774324674 0.0922206001508943 5 5|0 +|/ 22200276 22201594 22201182.4 22200204 22201793 + gene protein_coding_gene TRUE TRUE AT5G54600.1|AT5G54600.2 50S ribosomal protein L24, chloroplast (CL24) Identical to 50S ribosomal protein L24, chloroplast precursor (CL24) (RPL24) [Arabidopsis Thaliana] (GB:P92959;GB:Q9FIU4); similar to KOW domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23535.1); similar to 50S ribosomal protein L24, chloroplast precursor (CL24) (GB:P11893); contains InterPro domain Ribosomal protein L24/L26; (InterPro:IPR005825); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Ribosomal protein L24; (InterPro:IPR003256); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain KOW; (InterPro:IPR005824) 0.41400358744474 4.36223624993581 0.00123994389424794 0.02006737022791 7.18095115291156 23.3647706689882 0.41400358744474 0.0847015303243948 AT5G45140_at 4.36221238236642 3.98074497397057 5.12537773178094 4.59046697141058 4.45349543580568 4.39623120646845 4.20003341482206 4.47798940658792 3.61237182377994 4.34998293575716 4.83756583484486 4.84581870921746 4.3019388105953 4.84395650265309 4.61804161276803 4.87395250468085 5.38663957221336 5.08778819430842 4.87782356164107 0.214972628852582 0.215799756708437 0.223471480010416 0.215616881874010 0.217959553303598 0.217927027497662 0.213318893148753 0.213318893148753 0.228209652858238 0.213318893148753 0.214410400138824 0.214365286490480 0.218869955528025 0.21925498758173 0.213318893148753 0.213318893148753 0.215390070793106 0.221867925448766 0.220018895461670 5 0|5 /|- 18264898 18265643 18265216.75 18264455 18275365 - gene protein_coding_gene TRUE TRUE AT5G45140.1 NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase Encodes a subunit of RNA polymerase III (aka RNA polymerase C). similar to NRPB2 (EMBRYO DEFECTIVE 1989), DNA binding [Arabidopsis thaliana] (TAIR:AT4G21710.1); similar to RNA polymerase III subunit RPC2 (ISS) [Ostreococcus tauri] (GB:CAL50515.1); similar to DNA-directed RNA polymerase III 130 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96484.1); similar to putative RNA polymerase III [Oryza sativa (japonica cultivar-group)] (GB:AAP03366.1); contains InterPro domain RNA polymerase beta subunit; (InterPro:IPR007644); contains InterPro domain RNA polymerase Rpb2, domain 7; (InterPro:IPR007641); contains InterPro domain RNA polymerase Rpb2, domain 2; (InterPro:IPR007642); contains InterPro domain RNA polymerase Rpb2, domain 6; (InterPro:IPR007120); contains InterPro domain RNA polymerase Rpb2, domain 4; (InterPro:IPR007646); contains InterPro domain RNA polymerase Rpb2, domain 3; (InterPro:IPR007645); contains InterPro domain RNA polymerase Rpb2, domain 5; (InterPro:IPR007647); contains InterPro domain RNA polymerase, beta subunit; (InterPro:IPR007121) 0.47777553459856 4.34453891047459 0.00127611288698759 0.0206450264120240 7.15219118369275 9.01308001942802 0.47777553459856 0.123850282928732 AT5G19030_at 4.08485849364201 4.09513959179843 4.34527543542868 4.81642929157174 5.02548071060562 4.46839742347563 4.38807049543009 4.21658446526261 3.44202727337658 3.25183739123880 3.78650732103035 3.39555715577877 3.81206126367522 3.96162612825277 4.01376195594203 4.36170034651947 4.18362388851045 3.92213467538224 3.56710315247684 0.222197243735649 0.224292201039742 0.230915664920715 0.23822277452005 0.229071929853103 0.242580207019387 0.225715665962586 0.22070234209392 0.232249379965317 0.22070234209392 0.228659649436269 0.233599201094295 0.224475788864416 0.231501228040124 0.222641636624359 0.223563753732831 0.225195541216694 0.227959529686286 0.224525130131004 5 5 - 6357776 6359019 6358500.091 6357385 6359126 - gene protein_coding_gene TRUE TRUE AT5G19030.1|AT5G19030.2|AT5G19030.3 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G20030.1); similar to PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 (inducible form) isoform 1 [Mus musculus] (GB:XP_917137.1); similar to Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp (GB:1X5S); similar to Os03g0278800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049729.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G08000.1); similar to PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 (inducible form) isoform 1 [Mus musculus] (GB:XP_917137.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) 0.488515719963067 4.34242044912547 0.00128051620517002 0.0207085364766070 7.1487457691769 8.10500158719376 0.488515719963067 0.129714935868193 AT5G58660_at 1.15501570874404 1.15534648780479 2.03370234798310 2.19045306708716 1.59385502458968 1.91608220261667 1.08968223790665 1.32240623924852 1.20912659867550 1.41777940727532 1.36289415684781 0.96211670769981 1.53727317067845 1.74347928746824 1.31636684083515 1.7149069153538 1.2832885463872 1.35614063308144 1.47896209653473 0.181902604108864 0.182938874314606 0.188305174813263 0.177220634413213 0.182109001548039 0.183679987666221 0.178445878448525 0.179485014622684 0.182378500613099 0.179657961551629 0.188998456210651 0.187908449364857 0.185373658113616 0.179655770815607 0.178414630610121 0.179064679676226 0.188580407043497 0.182546191309326 0.185826755001469 5 5 + 23720418 23721002 23720728.818 23718693 23721214 + gene protein_coding_gene TRUE TRUE AT5G58660.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G47190.1); similar to H0321H01.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66494.1); similar to Os04g0407800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052718.1); similar to OSJNBa0042I15.12 [Oryza sativa (japonica cultivar-group)] (GB:CAE04890.3); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.396923036804311 4.34064517533627 0.00128421848466091 0.0207606661948405 7.14585806324583 2.94615840605883 0.396923036804311 0.07394148328175 AT5G16030_at 10.7486372609382 11.0083295676202 11.1139361280756 11.2464156729625 12.109156767411 11.6243066753043 11.2990482199391 11.1830387167889 12.4389864495202 12.1331028481452 13.1107953285631 12.9966149544078 12.8305955452053 12.9880919376051 12.7101581230926 12.8586781425760 12.0215547647581 12.404428985324 12.4271320220815 0.085200599541583 0.0848707083226789 0.089274897542366 0.0913346776050303 0.084898512882818 0.0882826792511983 0.0853718168962986 0.0848721484219979 0.0880219156494985 0.0823971638119363 0.0823971638119363 0.0823971638119363 0.0853330556828726 0.0842704329656362 0.0849510602321756 0.0823971638119363 0.0877361871013514 0.0849515193226311 0.0842785396161317 5 5|0 +|/ 5238883 5240551 5239505.7 5238183 5240751 + gene protein_coding_gene TRUE TRUE AT5G16030.1|AT5G16030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02500.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96956.1) 0.435365659529654 4.33826951513576 0.00128919045281964 0.0208332751807773 7.14199312133286 23.8282028741002 0.435365659529654 0.0999424380803088 AT5G40010_at 2.39768325708324 2.69212270220611 4.31689634957523 4.0708205446903 2.27658833304157 2.34212613566105 1.77962551693764 1.51157129326325 1.881831676104 2.23492641126511 1.96455431169890 1.60959351552107 1.76713052809315 1.64403901038158 1.74651868164062 1.29525312719805 1.29817215966361 2.01830723601739 1.91164831511855 0.250206571723633 0.254028052878818 0.285693283995887 0.252795175397373 0.24396837938356 0.251491355831078 0.229776176368202 0.234041512663764 0.231118388041728 0.245421520816329 0.237945902291737 0.229776176368202 0.230545759441584 0.23139397886303 0.229776176368202 0.234053437437954 0.236331905320020 0.235590421629137 0.236033084299574 5 5 - 16037599 16038003 16037806.273 16037446 16038990 - gene protein_coding_gene TRUE TRUE AT5G40010.1 AATP1 (AAA-ATPASE 1); ATP binding / ATPase similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28580.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE78645.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.407417209408528 4.33712476830063 0.00129159348442788 0.0208643315989504 7.14013048407167 4.51213670261031 0.407417209408528 0.0817939457005392 AT5G42660_at 4.95394506505637 5.39439034845027 5.53948289331532 5.66217260518459 6.06295158104516 5.38051596787914 5.24160743495762 5.30420003078176 5.08859069817454 4.97766844119336 5.33234530321161 5.35760066929172 5.46219671312744 5.44542327677632 5.11864255211797 5.45420372807596 4.79243416751459 5.5593671336078 4.11720058290684 0.215831840932972 0.203043773644942 0.20626032395588 0.199706555824184 0.206687327637106 0.208201655106977 0.203463110572718 0.198904145093222 0.213665870602136 0.202889975842807 0.201222574073891 0.209698343843197 0.204929027206531 0.210118272778082 0.205890731182497 0.206747873184022 0.210582133658866 0.206160625965744 0.204787825980337 5 5 - 17121255 17121968 17121700 17120152 17123194 - gene protein_coding_gene TRUE TRUE AT5G42660.1 similar to hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Arabidopsis thaliana] (TAIR:AT2G02910.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56045.1); contains InterPro domain Protein of unknown function DUF616; (InterPro:IPR006852) 0.512600913792528 4.3355647567871 0.00129487580959643 0.0209095636545242 7.13759189244312 10.4639565410289 0.512600913792528 0.142566063274422 AT5G64920_at 6.89640170417764 7.04562749226635 7.48557892634496 7.01922511624326 7.79514285647413 7.47108623590097 6.87551878889543 6.4497748782597 7.31793594291425 7.6369725703237 8.32076693387777 8.20309889943056 7.69763248877907 7.84136822012 8.05569462890883 8.19222761744346 7.36392330078744 7.61690765683916 7.78101021091224 0.177886871219689 0.169683922599073 0.170105026357252 0.175003484412816 0.167451977863283 0.174947941161518 0.175307495907301 0.180721832435166 0.182051441083627 0.177235137350898 0.168027306643698 0.169662550904678 0.171113705912047 0.179763350748366 0.180670772776088 0.167451977863283 0.178315313999810 0.180364060044713 0.168350443948726 5 5 - 25961601 25962088 25961840.818 25961114 25962668 - gene protein_coding_gene TRUE TRUE AT5G64920.1 CIP8 (COP1-INTERACTING PROTEIN 8); protein binding / zinc ion binding Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5. Identical to E3 ubiquitin-protein ligase CIP8 (EC 6.3.2.-) (COP1-interacting protein 8) (CIP8) [Arabidopsis Thaliana] (GB:Q9SPL2); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G13430.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.479370230698803 4.33107452910887 0.00130437242014757 0.0210550725146769 7.13028325123945 14.8748405213153 0.479370230698803 0.125512335489898 AT5G47970_at 5.74369051203681 5.9616120293804 6.58453426890856 6.23936162788030 7.04604502868446 5.89620865735998 5.76617312140796 6.48880668761092 5.36893807924537 5.31225726021374 6.25572926196554 6.48301005724539 6.39531711452324 6.90421769578769 6.11064453159488 7.08326885193784 5.37971845190894 5.98257940185175 5.21841815332895 0.23258175690694 0.227206787666418 0.238815689478390 0.238486099955630 0.232098357216997 0.242556541464870 0.232315454954241 0.231256974520528 0.245591076209103 0.232103667137340 0.230105740819707 0.230965193088507 0.228835213250584 0.227206787666418 0.227735059042404 0.227206787666418 0.245207749414494 0.232991324900534 0.230400708657836 5 5|0 +|/ 19441961 19442775 19442365.889 19439429 19443037 + gene protein_coding_gene TRUE TRUE AT5G47970.1|AT5G47970.2 nitrogen regulation family protein|FAD binding / oxidoreductase similar to FAD binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G63510.1); similar to Os04g0278900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052360.1); similar to tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri] (GB:CAL55090.1); similar to OSIGBa0113C11.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66291.1); contains InterPro domain Dihydrouridine synthase, DuS; (InterPro:IPR001269); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009) 0.737953157344259 4.32877465968926 0.00130926483454164 0.0211261801719682 7.12653880874452 12.0278949092160 0.737953157344259 0.245405724080920 AT5G24970_at 3.01066045169172 2.48955402113786 3.29748559173188 3.01238330822917 3.07032352057333 3.15084264912902 3.28391649693224 2.91532003957419 3.17859453124830 3.29493839745122 4.06901193323136 4.68149869839576 3.78527838177722 3.86025870523281 4.22710248367048 4.03793639885032 3.56814348347697 4.20647698015417 3.48250968441174 0.186686879871711 0.183378796367626 0.187575827434592 0.190063862525750 0.180632383464500 0.186316197291257 0.185032303618702 0.187389964743029 0.193375000003272 0.188550137514305 0.182675963846187 0.193850250414382 0.181472530848485 0.191416452462814 0.187257825354767 0.183687156563914 0.183198985827716 0.184831148638815 0.188843131515662 5 5|0 -|/ 8604398 8605075 8604683.9 8604339 8608842 - gene protein_coding_gene TRUE TRUE AT5G24970.1 ABC1 family protein similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT1G79600.1); similar to putative ubiquinone biosynthesis protein ubiB [Oryza sativa (japonica cultivar-group)] (GB:BAC84387.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.471839263571701 4.32512063543686 0.00131707756013404 0.0212443392714010 7.12058826428911 6.71538288694279 0.471839263571701 0.121777117513155 AT5G16160_at 1.67021816099521 1.62532021780351 2.25711280755336 2.30221411054745 2.20587026217054 1.81012451493099 1.57006750995561 2.00810432366234 1.88473288621816 1.38208806385355 1.87174410379591 1.87753803669565 1.97994025570789 1.98515347483358 2.05112787641621 2.38749949615578 2.27442049488572 2.06006789845701 1.56162104568663 0.193196084943455 0.19442692476265 0.194193025734477 0.193388109561273 0.190899261064701 0.19933505240728 0.193410564895401 0.192907781440758 0.203821179338150 0.196700539064812 0.190412766470745 0.191272392262751 0.192975652973577 0.193181709003177 0.190203817850082 0.194762689027552 0.194620721033735 0.194752000223822 0.199343234864875 5 5|0 -|/ 5275955 5276553 5276312.8 5275698 5276609 - gene protein_coding_gene TRUE TRUE AT5G16160.1 similar to hypothetical protein [Cleome spinosa] (GB:ABD96920.1) 0.438429330031053 4.32284645400507 0.00132196472886632 0.0213152390747564 7.11688392200937 3.766337548388 0.438429330031053 0.102751474337229 AT5G64970_at 3.01586914116482 2.98598924676943 3.50709956312227 3.68384274010566 3.56234131887889 3.43660612525195 2.97560258132247 3.07895978259206 2.99529599765264 3.40734802424560 3.54779720566258 3.46230957392431 3.2827011439705 3.06845164927685 3.13444761247779 3.25460872215174 3.73988382024897 3.40186102691307 3.12196379581238 0.206396843194598 0.205996435185749 0.217410546797311 0.212475997704902 0.207524804847668 0.215060046855364 0.203373910403239 0.203978801409127 0.208978537800489 0.207745052821335 0.203373910403239 0.209606212682350 0.209357807621486 0.215194797753182 0.208778867635037 0.209168202677907 0.221133777112447 0.211141785699450 0.209824077207797 5 5|0 -|/ 25976081 25976761 25976430.1 25975251 25977870 - gene protein_coding_gene TRUE TRUE AT5G64970.1 mitochondrial substrate carrier family protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G78180.1); similar to 80C09_21 [Brassica rapa subsp. pekinensis] (GB:AAZ41832.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.360002785317759 4.31560482304228 0.00133765411403771 0.0215601953713804 7.10508387525704 6.54897724585016 0.360002785317759 0.0419003219366743 AT5G03150_at 2.85899408998868 2.60806424750961 2.43330345377029 2.87685435051752 2.97481276811059 3.36620098906104 2.48126415217468 2.61025955209239 3.4720949655591 3.39584224860164 4.59614090181715 4.51856311409737 4.41789923405893 4.86038427186496 4.10953013541771 4.60911560666218 3.56500145985815 4.73173053545405 4.49857982777278 0.223303009166409 0.219552606805207 0.222195463365549 0.215834208514145 0.225071090862574 0.219780770407916 0.221354473916897 0.216586902157594 0.227678445718152 0.22589991650911 0.224367946125386 0.220118356257453 0.22085299690007 0.229927837344276 0.219624982528568 0.215834208514145 0.224370938897615 0.217623544197238 0.222252875752440 5 5 + 748104 748648 748382.727 745643 749004 + gene protein_coding_gene TRUE TRUE AT5G03150.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G45260.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE83457.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.455177011674747 4.30912121479517 0.00135186712072305 0.0217761400470808 7.09451335883404 6.88366153609393 0.455177011674747 0.113417198255985 AT5G41850_at 4.04345647019896 4.38072718616118 5.20070408972256 4.80484021862064 4.6813586332063 3.63097077355055 4.22234413963696 3.57682270059359 2.75309189888197 3.65661194450960 3.97777636126847 3.92760955748116 4.11745937139879 4.41438935929985 4.63402416530832 4.69513286121457 4.32891762694095 4.48649392751119 3.91537275668938 0.191768728494110 0.199710682675010 0.193816009661578 0.20236493332536 0.196592958625486 0.201069865129478 0.198562950154693 0.192986790787437 0.223071855233275 0.191005851335358 0.194158159527159 0.193056707735453 0.206442782554042 0.195494425104069 0.193480147026093 0.196858631779213 0.202209363119371 0.194734984870390 0.191256644570506 5 5|0 -|/ 16773929 16774905 16774250.667 16773926 16775448 - gene protein_coding_gene TRUE TRUE AT5G41850.1 similar to Os05g0214400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054927.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT47105.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.702332004201634 4.30903534589731 0.00135205641816516 0.0217761400470808 7.09437332719639 8.19986182837629 0.702332004201634 0.231561905245874 AT5G23130_at 2.67752792042744 3.48912276774863 3.2901047827449 3.37927872715749 4.31453734054191 4.05661017351309 3.07210514494539 3.29067993113922 3.20812261632168 3.03279823631221 4.1504847082773 3.69929335379478 3.27254113063104 3.51462678237356 3.79031881468644 3.84712431019163 3.43811275971004 3.37283090529344 3.36957128999918 0.246249760520526 0.25142398041969 0.253183870141005 0.251878921618020 0.252165591334438 0.254701735029084 0.253115126691778 0.247836585501718 0.253584293742068 0.251377203801854 0.246016070688855 0.250396702450359 0.252969931925754 0.258616402796301 0.25021572314047 0.249396084093229 0.258623169562378 0.257457544710552 0.246098042564371 5 5 + 7782835 7783283 7783072.273 7781199 7783604 + gene protein_coding_gene TRUE TRUE AT5G23130.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08200.1); similar to Os10g0485500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064897.1); similar to LysM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93589.1); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) 0.529971514833135 4.30765180425862 0.00135511026652195 0.0218108390463624 7.09211697300502 6.865827836776 0.529971514833135 0.152929763425872 AT5G46110_at 13.2386002498258 13.3091405347527 13.5184998297039 13.5510335087797 13.5832877036436 13.5820125326444 13.4664316341639 13.6661809002379 13.8199328256066 13.6417200022900 14.4899368061312 14.36824001639 14.2720376631411 14.3296096190583 14.1698378175243 14.2496459352872 13.9018762130668 14.3044190694796 13.6026644384655 0.0557287882434068 0.0537576750474832 0.0601319784412947 0.0542288275517315 0.0541143083958606 0.0568295999013442 0.0537576750474832 0.0557789036069457 0.059544983422448 0.0563608779849531 0.0537576750474832 0.0540689216262868 0.0537576750474832 0.0543162075763857 0.0537576750474832 0.0537576750474832 0.0587890409264712 0.0537576750474832 0.0569268750012392 5 0|5 /|+ 18716443 18717017 18716708.167 18714462 18717883 + gene protein_coding_gene TRUE TRUE AT5G46110.1|AT5G46110.2|AT5G46110.3|AT5G46110.4 APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); antiporter/ triose-phosphate transporter|APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter|APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (GB:P52177); similar to triose phosphate/phosphate translocator precursor [Mesembryanthemum crystallinum] (GB:AAF86906.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696)|similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (GB:P52177); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696) 0.355607350501816 4.30760353482722 0.00135521694077972 0.0218108390463624 7.0920382482453 27.4638014357009 0.355607350501816 0.0370901676325609 AT5G61280_at 2.44962264431147 2.20565503214625 2.36204060678138 2.68549771852412 2.1273280317929 2.75322577364065 2.5624621888729 2.31044517471471 2.28021746012395 2.92935664875422 3.36135049696654 3.97301218033225 2.82936798086761 3.57266011887882 3.33874240342222 3.65238263792525 3.11227862277527 3.73787799188047 2.45207773009003 0.226175056406195 0.222971750351000 0.224923396917846 0.228740345438328 0.225783676499775 0.236198492011305 0.228508071551937 0.231585735707800 0.227254349808921 0.219080552992378 0.232201357354025 0.226886093751376 0.230227381180599 0.239235863464582 0.231198684697114 0.229388491271221 0.228940348718758 0.224658466624420 0.236333745848542 5 5 - 24660853 24661703 24661303.636 24660851 24662136 - gene protein_coding_gene TRUE TRUE AT5G61280.1 remorin family protein similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT1G13920.1); similar to Os10g0325400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064352.1); similar to Os03g0211500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049348.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94601.1); contains InterPro domain Remorin, C-terminal region; (InterPro:IPR005516) 0.496650940240875 4.30527562135698 0.00136037205210443 0.0218856814618472 7.08824120100359 5.43258114657494 0.496650940240875 0.136198006730775 AT5G40150_at 2.37829930554498 2.75068377218914 2.35277855478722 2.54669432845009 2.70227207847902 2.95081534616372 3.02229766398063 4.02723731108158 2.94079937912811 2.94980919877042 4.75574585451752 5.79906304135912 4.31981391996171 5.18281091158855 5.04248428418217 4.73043701591646 3.80789969364182 4.09777097145292 3.35213436959611 0.242962276068230 0.2414243793257 0.249963669524705 0.245502433297829 0.248768300284776 0.246638356757525 0.244701774212045 0.247463787879361 0.247890639059966 0.243127581752008 0.245225563891583 0.249296789995879 0.246690619527326 0.240068358020755 0.248482345172524 0.240068358020755 0.247956397064475 0.252939759030697 0.240068358020755 5 5 - 16077023 16077482 16077262.909 16076737 16078271 - gene protein_coding_gene TRUE TRUE AT5G40150.1 peroxidase, putative Identical to Peroxidase 63 precursor (EC 1.11.1.7) (Atperox P63) (ATP26a) (PER63) [Arabidopsis Thaliana] (GB:Q9FL16;GB:P93726); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT3G28200.1); similar to Haem peroxidase, plant/fungal/bacterial [Medicago truncatula] (GB:ABE90190.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.61479972975846 4.30195709457364 0.00136775647357632 0.0219957715129537 7.0828271858093 6.74034355878909 0.61479972975846 0.193322351549739 AT5G44460_at 2.09109866433378 2.62047961168689 2.88908655949104 2.99578690111826 2.02886106515545 2.23828185335757 1.64807350563894 1.54329465864526 1.14927513267709 1.64991356491128 1.82143067966181 1.62557541372052 1.43155143376408 1.83060243604126 2.02598743908319 1.97555666638684 1.91090293711703 1.70301396311429 1.65037927581576 0.193779628796346 0.189369681780362 0.185228888311397 0.193685967146573 0.186482223470126 0.190395071062546 0.188951455993801 0.185228888311397 0.191944364034004 0.193179269575854 0.188296583092174 0.199629410443484 0.189838839352765 0.187362810448049 0.194753226479508 0.189167779930855 0.187237925095271 0.191231191181386 0.187083370133844 5 5 + 17934544 17935029 17934735.273 17934453 17935210 + gene protein_coding_gene TRUE TRUE AT5G44460.1 calcium-binding protein, putative similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G20780.1); similar to putative calmodulin-like protein [Populus x canadensis] (GB:CAG27612.1); similar to Calcium-binding protein CAST (GB:Q09011); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.434827890673725 4.30174508395386 0.00136822966970307 0.0219957715129537 7.08248125353244 3.89375382521799 0.434827890673725 0.101862160128643 AT5G64850_at 5.67172989373063 6.07419606129604 6.44793152336016 7.2830452189955 6.86815898516559 6.58718872328668 7.22094130588554 7.7917318876973 7.35779163815315 6.88943338497467 8.753081772733 8.81940959517997 8.52728682227403 8.1923120557778 8.4216674309252 8.63547754663902 7.02863444818083 7.45522926458426 7.05607464442678 0.241006371217681 0.233355431757028 0.231392232160479 0.236189444184953 0.230469005338280 0.247523285429047 0.231529435875458 0.243946987884954 0.240686564819699 0.229776432298559 0.229776432298559 0.232681931488282 0.235059299918336 0.242437700349223 0.233238829608312 0.230717585969409 0.242743376966746 0.233204516434062 0.239132947635262 5 5|0 +|/ 25939090 25940221 25939334.1 25938635 25940584 + gene protein_coding_gene TRUE TRUE AT5G64850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09960.1); similar to 80C09_15 [Brassica rapa subsp. pekinensis] (GB:AAZ41826.1) 0.617484401700751 4.30148464991109 0.00136881117949810 0.0219969638257834 7.0820563022381 14.408234078038 0.617484401700751 0.194572253113139 AT5G63130_at 3.58476319729213 3.43507991878191 4.09769489873807 4.52854062585499 3.52261156814819 3.38888761915346 3.38475868715068 3.35887342943511 2.92174977931426 2.39774955650731 2.80416008727138 2.39475238647336 3.21429067462812 2.99498571953552 2.94659050406962 2.99536907908477 4.07769320473558 2.72615724275855 2.64023094371332 0.275814206703659 0.274625411955294 0.318658181663527 0.306831447211341 0.266520285309951 0.281691849624034 0.271522612019566 0.265267066049476 0.268862759077436 0.270216852834141 0.272193230986405 0.269345776215273 0.272789124517356 0.26887522943278 0.276665163849825 0.267739552020852 0.286610671773523 0.273844719070008 0.283418979525691 5 5|0 +|/ 25340456 25341058 25340825.9 25340328 25341498 + gene protein_coding_gene TRUE TRUE AT5G63130.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48240.1); similar to Octicosapeptide/Phox/Bem1p [Medicago truncatula] (GB:ABE82497.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.404785652808353 4.30032200593576 0.00137141035374544 0.0220305673573476 7.08015910693163 6.49889788748494 0.404785652808353 0.082375704247995 AT5G14050_at 5.33537269453641 5.57688117140436 6.12510527945133 5.8106527371477 5.59864431275971 5.74642126735491 5.10142166748408 5.54658164144742 3.96754729135904 4.65792431580019 5.10099398059117 5.49213047788005 4.84076436269949 4.35926366419603 5.08352084324929 5.04562276263735 4.86963698392972 4.12544896733084 4.6082688670631 0.235544132090875 0.229505524553562 0.234359641135470 0.236180927771885 0.227501210356613 0.226201725174975 0.234332714763809 0.225875036133622 0.240433276802574 0.227191332396976 0.229838747036587 0.237615761135696 0.22555577546061 0.239248969132761 0.234440700492885 0.229590033590617 0.247147734988898 0.233388356978687 0.228990706134860 5 5 + 4534603 4535148 4534898.364 4533263 4535303 + gene protein_coding_gene TRUE TRUE AT5G14050.1 transducin family protein / WD-40 repeat family protein Identical to U3 small nucleolar RNA-associated protein 18 homolog [Arabidopsis Thaliana] (GB:Q9FMU5); similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G25150.1); similar to WD40-like [Medicago truncatula] (GB:ABD32295.1); similar to Inorganic pyrophosphatase; WD40-like [Medicago truncatula] (GB:ABE84702.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.441783768016905 4.297957645755 0.00137671204522050 0.0221075436110756 7.07630043273226 10.2430948864757 0.441783768016905 0.10628602366792 AT5G15980_at 4.10341117337947 5.26483078829052 5.36322760277441 6.04680983890241 5.46705970819381 4.94235925699558 4.80776732757399 5.21459487391111 3.76551656557190 3.52673186992676 4.67351669618732 4.93653817046244 4.4657328695525 4.18488901632317 4.17218910951661 4.74434822980474 4.41556983882856 4.49272104732625 3.46213675785861 0.278274879031456 0.265450098079950 0.265908224113055 0.282731754734201 0.268418120969006 0.294329184457121 0.266109934586495 0.268706457087399 0.279410185965226 0.274511416510909 0.266453377770132 0.265450098079950 0.265450098079950 0.271348013535837 0.271504197628568 0.265450098079950 0.290218327638255 0.268893454382877 0.267412914213678 5 5 + 5214784 5215271 5215081.727 5213084 5215623 + gene protein_coding_gene TRUE TRUE AT5G15980.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G02490.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96873.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) 0.766553059362779 4.29539410141289 0.00138248469178124 0.0221920227664394 7.07211589095363 9.19899916460398 0.766553059362779 0.259985442456321 AT5G62520_at 1.60464688706183 1.82180396444226 2.57530231976265 2.64187074222750 2.17563714895590 2.15012764862631 1.99129571948528 1.32876762332533 1.42575274457513 1.74954333152412 1.74057213892488 1.62289802385050 2.11410937215174 1.83215524202413 1.53459456503469 1.58209654163151 2.14547301167129 1.88953595883314 1.53989949713135 0.230887674213218 0.223335314683582 0.241841414282699 0.223896892216261 0.224220004031257 0.234870319200344 0.22238434378661 0.230712355857044 0.236594394741004 0.231779704532393 0.225314718547058 0.222116824185134 0.222116824185134 0.234016887640623 0.222116824185134 0.222116824185134 0.234205987343286 0.226014531714085 0.234921585524169 5 5|0 +|/ 25115627 25116437 25115995.889 25115224 25117133 + gene protein_coding_gene TRUE TRUE AT5G62520.1|AT5G62520.2 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to SRO4 (SIMILAR TO RCD ONE 4), NAD+ ADP-ribosyltransferase [Arabidopsis thaliana] (TAIR:AT3G47720.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93110.1); contains InterPro domain PARP, catalytic; (InterPro:IPR012317); contains InterPro domain Poly(ADP-ribose) polymerase, catalytic region; (InterPro:IPR001290) 0.46752670766806 4.29376481208647 0.00138616676280939 0.0222428933200383 7.0694559286113 3.72588711399027 0.46752670766806 0.121284378558850 AT5G55840_at 2.26835342714747 2.13369961750377 2.74802541116427 2.65201763604153 3.25483019875871 2.57220668397063 2.60969821142294 2.37839533883143 2.72935556372185 2.25096588107231 2.89577182547273 2.97281600164288 2.79245130633432 2.86056244147007 2.87825631728115 3.09453081371377 3.16973102320526 2.43709837621667 2.1823801757973 0.247266681039268 0.245360180280038 0.258334132264083 0.253001468690751 0.245424307554218 0.249372575713861 0.241484282353906 0.250175399312738 0.251866790811622 0.245379577263963 0.245688310489579 0.243148304538736 0.243728545288255 0.241739952282551 0.249944291031553 0.252879017719943 0.248398779855364 0.246760040981373 0.241484282353906 5 5|0 +|/ 22619090 22619588 22619403.1 22615624 22619725 + gene protein_coding_gene TRUE TRUE AT5G55840.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); similar to Os03g0603700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050629.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.479659195030334 4.29262294966735 0.00138875341974560 0.0222761553573088 7.06759153583143 5.21476305062056 0.479659195030334 0.127969802002009 AT5G07010_at 3.85658200612196 3.37179440307604 3.73788999546562 3.98559229054965 2.72963036530298 2.42448381902625 1.35339012579434 1.12917766611119 1.59549905897213 1.43029236023721 1.55224628386904 1.86756381140773 2.16476157118948 1.50278985942676 1.72884370205189 1.53444047024648 1.92186794309355 1.70121083994027 1.85915980795764 0.233697025872253 0.237122087181516 0.232380774971900 0.247921288775961 0.225643195914414 0.23160954505092 0.228921358016026 0.227660636696142 0.228115626755355 0.230131724466511 0.232974316094396 0.230000357811886 0.228177036811042 0.234380915983649 0.225365626154259 0.225365626154259 0.235808341814008 0.234265573212560 0.230744825166571 5 5 - 2175031 2175491 2175312 2174679 2176107 - gene protein_coding_gene TRUE TRUE AT5G07010.1 sulfotransferase family protein similar to sulfotransferase family protein [Arabidopsis thaliana] (TAIR:AT5G07000.1); similar to Sulfotransferase [Medicago truncatula] (GB:ABE88692.1); contains InterPro domain Sulfotransferase; (InterPro:IPR000863) 0.455030775870532 4.28554496281229 0.00140490060121663 0.0225268285390602 7.05603119421925 4.51108390186874 0.455030775870532 0.114760308651483 AT5G45970_at 1.38822690283973 1.35811907866662 2.20268937253773 2.3478258163955 1.73711058196086 1.81866424027322 1.72466932707953 1.91100017201427 1.99251616376058 2.08548851763508 2.05435681163315 2.30040959706520 1.88035371584800 2.37880317213657 2.33365388763099 2.38884187667068 2.75415434571883 2.30999605754693 1.96388869046642 0.193057513597769 0.188152029231313 0.185730550300946 0.186438059268362 0.189573381911614 0.183589878987686 0.189567209675704 0.189927301408589 0.193711920948294 0.183905629602519 0.183589878987686 0.190085521543339 0.185175206742374 0.195291346271393 0.187723715028897 0.186839933261108 0.187644224561336 0.183589878987686 0.189297347436212 5 5|0 +|/ 18661063 18662899 18661821.6 18660961 18663193 + gene protein_coding_gene TRUE TRUE AT5G45970.1 ARAC2 (RHO-RELATED PROTEIN FROM PLANTS 7); GTP binding Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family. Identical to Rac-like GTP-binding protein ARAC2 (GTPase protein ROP7) (ARAC2) [Arabidopsis Thaliana] (GB:Q38903); similar to ARAC11/AtROP1/ROP1/ROP1AT (rho-related protein from plants 1), GTP binding / GTPase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G51300.1); similar to Rac-like GTP-binding protein RAC9 (GB:Q41254); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.358587679192862 4.28223629844348 0.00141251620472958 0.0226405676707297 7.05062506085066 3.96805600663026 0.358587679192862 0.0435538576661281 AT5G28630_at 3.08679574272205 2.89787034793539 2.50020777510371 2.39693973591934 2.95215406944285 3.09197782293182 2.34436075235092 2.47402138648732 5.70518193276154 4.19332740723185 6.25653404572344 8.72312840241919 4.03648522802165 7.29644490742312 5.9225459154659 3.5953375280651 3.69536697379261 3.63876710192107 4.20941461526116 0.262915039631304 0.268896206977794 0.262915039631304 0.269170884822437 0.262915039631304 0.269296911885141 0.274724221990694 0.26778081920987 0.275044833541699 0.269591590921205 0.271389511986277 0.278469793260012 0.265756798148081 0.27267353043992 0.277553707092947 0.262915039631304 0.268670389237249 0.265097527735968 0.272054963755026 5 5 + 10636702 10637111 10636857.636 10636635 10637253 + gene protein_coding_gene TRUE TRUE AT5G28630.1 glycine-rich protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28610.1); similar to RPGR [Rattus norve (GB:AAX49610.1) 0.363746368955669 4.27744075603243 0.00142363116619901 0.0228102915971862 7.0427870381728 7.76714974474777 0.363746368955669 0.0497722947888306 AT5G20480_at 3.44735844698826 3.85166779193905 3.61443859512392 3.93063082158205 3.2141165929509 3.47805006317356 2.63240307129703 2.17139973135601 2.34833985342983 2.53590586196761 2.92948126548337 2.45560213971446 2.52249561235417 2.70917453459184 2.78470366529907 2.93910263970845 2.96170608666031 2.82594678826879 2.15063895306768 0.226598137322907 0.244692090471907 0.229297847046133 0.244354081804805 0.226377938521338 0.231668118926349 0.220050450420814 0.225462832331827 0.225093920257481 0.229817995370334 0.229705369938470 0.228199349404633 0.226717775748738 0.222356290704315 0.223637506292003 0.225457869743414 0.226007612286667 0.236708949285979 0.228761229034912 5 5|0 +|/ 6925001 6925626 6925260.3 6922482 6925889 + gene protein_coding_gene TRUE TRUE AT5G20480.1 EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47090.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47110.1); similar to Protein kinase [Medicago truncatula] (GB:ABE91397.1); similar to Leucine Rich Repeat family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99894.1); similar to receptor kinase-like protein (GB:AAC49123.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.477333396583768 4.27412780782208 0.00143136339184445 0.0229257098817212 7.0373705478523 5.8480022131339 0.477333396583768 0.127829721295170 AT5G13120_at 10.0195433971235 9.97957473377036 10.1859705701532 10.1698833048717 10.4917273522503 10.4272647294004 10.4789843090897 10.6874446979164 10.6235973580023 10.5674112686664 11.3623597759883 11.3363681455904 11.1219897937675 11.2713490935433 11.4931402600294 11.3393824013249 10.9168404905224 11.0089683453159 10.4630161748181 0.0721226793421733 0.0756274592382191 0.0779439881162091 0.0738866920466338 0.0734392155545189 0.0766028799724174 0.073682479288917 0.0729325913442645 0.0769555586257062 0.0762651025706741 0.0744378167102583 0.0709362756086265 0.0719014213988439 0.0718887387405099 0.0731099266874344 0.0709362756086265 0.0778734250451644 0.0721115820213069 0.0760464448541707 5 5|0 -|/ 4162725 4164397 4163525.4 4162506 4164787 - gene protein_coding_gene TRUE TRUE AT5G13120.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein Identical to Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplast precursor (EC 5.2.1.8) (PPIase CYP20-2) (Rotamase CYP20-2) (Cyclophilin of 20 kDa 2) (Thylakoid lumen PPIase of 20 kDa) (TLP20) (CYP20-2) [Arabidopsis Thaliana] (GB:Q9ASS6;GB:Q53YK9;GB:Q8L9L5;GB:Q9FY98); similar to ROC4 (rotamase CyP 4), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G62030.1); similar to cyclophilin-like protein [Triticum aestivum] (GB:AAP44537.1); similar to cyclophilin-like protein [Triticum aestivum] (GB:AAP44535.1); similar to Os05g0103200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054392.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) 0.353641446229274 4.27127827315482 0.001438049287864 0.0230242903706490 7.0327106184949 21.1963698311999 0.353641446229274 0.0384895738893615 AT5G43860_at 6.3314307456156 5.97533781596877 6.79581220876418 6.9513718115715 6.65285239121334 6.13840055949239 6.8450186214004 6.0680849866647 4.03870423225751 4.26243983215067 3.9980573339642 4.11368344228994 5.0377050836804 5.2779676275035 4.57664428249592 4.51954814185446 5.7839078583423 4.74516164728207 3.53686132465478 0.21441027282949 0.207959679722915 0.227705499246004 0.221220798067706 0.224512001339621 0.231697556103531 0.215005832868015 0.213744375715067 0.225162009267405 0.214459053479708 0.207517925619034 0.211462275631945 0.206894649565736 0.215150230103206 0.212519314374473 0.208635117247132 0.21261417239045 0.212845971453844 0.206894649565736 5 5 + 17648816 17649360 17649017.818 17647677 17649539 + gene protein_coding_gene TRUE TRUE AT5G43860.1 ATCLH2 (Chlorophyll-chlorophyllido hydrolase 2) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation. Identical to Chlorophyllase-2, chloroplast precursor (EC 3.1.1.14) (AtCLH2) (Chlorophyll-chlorophyllido hydrolase 2) (Chlase 2) (CLH2) [Arabidopsis Thaliana] (GB:Q9M7I7); similar to ATCLH1 (CORONATINE-INDUCED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G19670.1); similar to chlorophyllase 2 [Brassica oleracea] (GB:AAN51934.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Chlorophyllase; (InterPro:IPR010821) 0.570111915585132 4.26898501986511 0.00144345376803676 0.0231022891861898 7.02895965822157 10.8210817543518 0.570111915585132 0.174715591300659 AT5G11450_at 9.51819060921622 9.4940673153089 9.77663042309187 9.63783473141593 10.2680418766221 9.75911317726455 10.2905793801469 9.95723200584047 9.7001540099562 9.81091491582062 10.5751594052621 10.8804695867852 10.4583996223661 10.5015057881278 10.8670213060102 10.4135976969154 10.3228681448182 10.2588122326194 9.57897771493269 0.0888876365056257 0.085278317420663 0.0882749931485726 0.0871932141357305 0.085278317420663 0.0859807567375089 0.0863675923110489 0.0956043324651743 0.0945074556831128 0.088270887029965 0.0862087171364267 0.0854890966097544 0.0882700837457622 0.0906086816572032 0.085278317420663 0.085278317420663 0.0904450450930703 0.0896061681767476 0.09190521764193 5 5|0 +|/ 3655217 3656299 3655796 3654428 3656556 + gene protein_coding_gene TRUE TRUE AT5G11450.1 oxygen-evolving complex-related similar to Os01g0617900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043586.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61296.1); contains InterPro domain Photosystem II oxygen evolving complex protein PsbP; (InterPro:IPR002683) 0.441717366881849 4.26822460576864 0.00144525052714288 0.0231225106398471 7.02771574223823 19.9534169080798 0.441717366881849 0.10806914873415 AT5G67360_at 8.70498498643972 9.00800952403413 9.39329565732275 9.69407382576273 9.62653068830248 9.63946490412967 9.84299354040531 10.0984845948242 9.94818462079587 9.57439013949476 10.4059182614049 10.3917373576608 10.0697085701981 10.2319303618491 10.3197021634879 10.3288389911642 9.95557547506173 10.4621466769782 9.3743103660401 0.0923552112189895 0.0876946179401108 0.0940840326170838 0.0928156836698728 0.090039333205323 0.0945465087587324 0.089448275637123 0.0915130297671254 0.0979705095494585 0.0916820120559761 0.091890226636626 0.0908664667574587 0.0904721874107456 0.093724469162438 0.0893145255894295 0.0876946179401108 0.0983703442867668 0.0910664612128678 0.0960007538441408 5 5 - 26889489 26889986 26889815.455 26889117 26891805 - gene protein_coding_gene TRUE TRUE AT5G67360.1 ARA12; subtilase subtilisin-like protease that has been located in stem and siliques but not roots. Identical to Subtilisin-like protease precursor (EC 3.4.21.-) (Cucumisin-like serine protease) (ARA12) [Arabidopsis Thaliana] (GB:O65351;GB:P80854;GB:Q39007;GB:Q8RWQ7); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G51750.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G14067.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE87035.1); similar to SBT1 [Solanum lycopersicum] (GB:CAA67429.1); similar to subtilisin-like serine proteinase, putative [Musa acuminata] (GB:ABF70004.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.406561398784465 4.26198305682855 0.00146008745958928 0.0233512694780373 7.0175028495765 19.4524746023205 0.406561398784465 0.0861343582081334 AT5G12280_at 1.07291680318373 1.46147211122226 1.89156690338275 2.04788228498467 1.53456816859870 1.65912465107388 1.36536781774900 1.63924761919375 1.11713354935768 1.46796693883807 1.85490200669227 1.87595086012343 2.20506280021371 1.66654935961905 1.38771692204845 1.71940718614 1.63794619196535 1.53736161325266 1.35827679028100 0.219866494909700 0.206273504972561 0.212465060681892 0.200937070195129 0.204803574428406 0.2056820818021 0.209521927910638 0.205291317212376 0.201287912179015 0.204527722489698 0.200573331868315 0.207288291692921 0.214966406039930 0.217107564606685 0.202184134730885 0.203646292153294 0.205125766120475 0.210549957046703 0.205796431942825 5 5 - 3972117 3972619 3972395.636 3972015 3973637 - gene protein_coding_gene TRUE TRUE AT5G12280.1 RNA binding similar to SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G14650.1); similar to Chain A, Solution Structure Of Ubiquitin-Like Domain In Splicing Factor Aal91182 (GB:1WE6); contains InterPro domain SWAP/Surp; (InterPro:IPR000061); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.409843719427049 4.24855964983475 0.00149254049218759 0.0238526958729276 6.99552210657432 3.10905390008982 0.409843719427049 0.0892422261481838 AT5G23800_at 1.14922825541028 1.21529314306394 1.4941439622146 1.37360389814994 1.69781320352174 1.76324936146097 1.40034642585452 1.2884873519757 1.18758918021578 1.07276690888363 1.57622398560417 1.98389527495703 0.885577185052515 1.72442201508937 1.81444182804341 1.75230856745435 1.34179067677176 1.98251882840855 1.50791609216132 0.207129260464936 0.207802834269114 0.209420918996661 0.207129260464936 0.210470595457486 0.207129260464936 0.207129260464936 0.211485408702307 0.21676584330979 0.215267844025197 0.208340627248505 0.207129260464936 0.207729731456435 0.209969674453788 0.216958640373247 0.212251981312112 0.218115340703228 0.213115319795775 0.209020880394642 5 5|0 -|/ 8022474 8022964 8022740.6 8022219 8024692 - gene protein_coding_gene TRUE TRUE AT5G23800.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23770.1); similar to Agenet domain containing protein [Brassica oleracea] (GB:ABD65016.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Protein of unknown function DUF724; (InterPro:IPR007930) 0.347710190173219 4.24825605622716 0.0014932831633554 0.0238557715693729 6.99502471658989 2.86713971133624 0.347710190173219 0.0326925954203831 AT5G49555_at 7.29442323770724 6.75916004519997 7.31448558652508 7.10365142267356 7.13222459154984 7.12231075518096 7.0926753606755 6.35827087074788 7.39494908868752 7.50140401726097 8.44076321238432 8.68986026679255 7.7163304202626 8.08540010901773 7.98541638310845 7.95380699973645 7.97475411312416 8.27374879039833 7.16177765707417 0.166564214158439 0.172710559776942 0.182388470701169 0.171116835539447 0.168615856985961 0.174581506857771 0.169009940598278 0.17755175036723 0.181982665183318 0.172335118854643 0.166564214158439 0.170263481202356 0.167440939775695 0.173700025765676 0.182906605040909 0.171187357519743 0.178508295630095 0.181879631592089 0.170422522357179 5 5|0 -|/ 20124656 20125637 20125167.7 20124455 20127862 - gene protein_coding_gene TRUE TRUE AT5G49555.1 amine oxidase-related similar to CRTISO (carotenoid isomerase), carotenoid isomerase [Arabidopsis thaliana] (TAIR:AT1G06820.1); similar to Os12g0631800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067343.1); similar to LOC495473 protein [Xenopus laevis] (GB:AAH85048.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Phytoene dehydrogenase-related protein; (InterPro:IPR008151); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.539667746455948 4.24667511700497 0.00149715683240051 0.0239088454695307 6.99243441478236 14.7685103793795 0.539667746455948 0.161452300764377 AT5G48600_at 2.66917533575437 2.51622195165596 3.43720691971791 2.99811044428293 2.5901408449511 2.87986876525669 2.9258289786751 2.63797441745678 3.15562124066081 3.19869041917605 4.06584029843479 3.94020993592794 3.15950931492419 3.53731350950288 4.48082819667048 3.42579693056525 3.02361555002449 3.75798230681814 2.90986856541358 0.211305429436017 0.199455838434889 0.202355476770166 0.206359738605633 0.211903340228243 0.205712485226971 0.206663171361073 0.200281275877052 0.202663536583455 0.201131451463260 0.199455838434889 0.207102802421227 0.208324447138249 0.204560426134755 0.201781774081813 0.199966778999364 0.205534170441129 0.203270491414454 0.204160875388515 5 0|5 /|+ 19725213 19726259 19725773.429 19719103 19726356 + gene protein_coding_gene TRUE TRUE AT5G48600.1 ATSMC3 (Arabidopsis thaliana structural maintenance of chromosome 3); ATP binding member of SMC subfamily similar to TTN8 (TITAN8), ATP binding [Arabidopsis thaliana] (TAIR:AT3G54670.1); similar to structural maintenance of chromosome protein [Dictyostelium discoideum AX4] (GB:XP_637730.1); similar to SMC4 protein [Oryza sativa] (GB:CAD32690.1); similar to putative SMC protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07581.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain SMCs flexible hinge; (InterPro:IPR010935) 0.437429251470823 4.24245204318761 0.00150755610688608 0.0240660525717390 6.98551357866558 6.21278949743985 0.437429251470823 0.107098744104106 AT5G09660_at 12.9006587607982 13.0453504783173 13.5496298318786 13.5003710264876 13.4814579568854 13.4043185690456 13.5854031713393 13.5718918236038 13.4218523706774 13.6513417073441 14.11948625057 13.9964433630526 14.0189090130604 14.0918545697416 13.8638785211041 14.1358744629139 13.9886908358891 14.1148257054034 13.6029030646258 0.0628142016507763 0.0625180547267958 0.0639260037254207 0.0647371330826928 0.063253776212645 0.0669834600781536 0.0623003998770054 0.0638908472902385 0.0676100453553089 0.0634044286186729 0.0632602514068718 0.0628339145992014 0.0625594752335027 0.06395213039687 0.0646422517675224 0.0622963977238404 0.0727464620032815 0.067947998685848 0.0622963977238404 5 5|0 -|/ 2993825 2994576 2994237.556 2993445 2995676 - gene protein_coding_gene TRUE TRUE AT5G09660.1|AT5G09660.2|AT5G09660.3 PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2); malate dehydrogenase|PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) encodes a microbody NAD-dependent malate dehydrogenase Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); similar to Malate dehydrogenase 1, glyoxysomal precursor (GB:Q43743); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097)|Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097)|Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097) 0.345332290113715 4.24146028266637 0.00151000927249225 0.0240963419785604 6.98388794873194 27.1798573961775 0.345332290113715 0.0297206785679254 AT5G56460_at 1.77123576176564 2.07163119353620 2.61632890030832 2.67267002965265 2.57280879019412 2.91029163394971 2.60915266848701 2.18718675202448 2.85785246133155 1.99359991874762 2.91297242312348 2.62305762075157 2.85690660616952 2.57290996980461 2.80649382174993 2.47676203766915 2.83848644545177 2.51033397444911 2.22071044320574 0.206281929913510 0.212342926577663 0.205350685692815 0.210625502883404 0.205117835097322 0.207795853453203 0.211051687677718 0.217806204405921 0.222361047037205 0.225400710147803 0.205370714448764 0.206663906623998 0.208062859746486 0.204709832312605 0.212098605928357 0.206513277524240 0.220209576988260 0.211249548989382 0.208024568121888 5 5 + 22884411 22884965 22884749.364 22882336 22885222 + gene protein_coding_gene TRUE TRUE AT5G56460.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G01020.1); similar to Protein kinase [Medicago truncatula] (GB:ABE87464.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.437787999603688 4.2406088736813 0.00151211861141080 0.0241211244176322 6.9824922775749 4.95497720131865 0.437787999603688 0.107428014801545 AT5G53300_at 13.2203315694760 13.3902552110625 13.7250844150090 13.8582905374804 13.7853423524808 13.6183675367651 13.1900380351954 13.4179296416216 13.7095864415428 13.3153206007631 13.9014830753318 13.7358042134889 14.0273202324696 13.9466029246870 13.6254615206205 13.8524076982849 13.4623848327682 13.9512890819976 13.5054705515027 0.067013514222265 0.0619999368644 0.067975225935741 0.0634060179549254 0.0601818868860184 0.0842891669470188 0.0670253606939855 0.06194433868344 0.0658626635971298 0.0700182976681128 0.0604942078887316 0.0616781264114148 0.0601818868860184 0.0683315801604843 0.0639608799622424 0.0625624010994666 0.0717171051658123 0.061195952244146 0.0601818868860184 5 0 / Inf -Inf NA 21649740 21651455 - gene protein_coding_gene TRUE FALSE AT5G53300.1|AT5G53300.2 UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase Encodes a ubiquitin conjugating enzyme. Identical to Ubiquitin-conjugating enzyme E2-17 kDa 10/12 (EC 6.3.2.19) (Ubiquitin- protein ligase 10/12) (Ubiquitin carrier protein 10/12) (UBC10) [Arabidopsis Thaliana] (GB:P35133;GB:P56617;GB:Q8LCR4); similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to ubiquitin-conjugating enzyme 8 [Capsicum annuum] (GB:AAR83891.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.372425464474075 4.23691969587374 0.00152129419541145 0.0242585670171133 6.9764437689877 27.1871899434158 0.372425464474075 0.0615337923032052 AT5G47230_at 3.45852784265177 3.65581688804847 3.59544501765053 3.72287157572586 3.63050677783227 4.37259841017361 2.40077724337642 3.29124638157481 3.94546408500970 3.50002014976721 5.02917890015536 4.99975868593723 4.09808310773322 4.46188317963697 4.38125265617911 4.14569246992536 3.91681296319618 4.20914340690461 3.87838632429145 0.21911943331535 0.222062896032500 0.226431467757667 0.221809202432746 0.228852880352435 0.230355402502455 0.240139602051705 0.225000885932844 0.229357845181722 0.223051354503218 0.220524429336343 0.227688358619973 0.221628172667592 0.228045970956284 0.217681166997230 0.216822491928855 0.226981357068659 0.222024653840617 0.224086908553917 5 5 + 19197618 19198177 19197863.909 19197166 19198356 + gene protein_coding_gene TRUE TRUE AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription factor/ transcriptional activator encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Identical to Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5) (EREBP-5) (AtERF5) (ERF5) [Arabidopsis Thaliana] (GB:O80341;GB:Q9LVT6); similar to ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17490.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD64947.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.629682753975876 4.2326860445967 0.00153189595829918 0.0244186420525817 6.96950052490554 7.6058983625782 0.629682753975876 0.204672956723354 AT5G43270_at 5.73963217049771 5.01181638579258 7.52710768815688 6.64772947445861 8.60984187465368 7.53287917170093 8.03777424446072 6.9615771091422 6.82240368641802 6.94958454001822 9.11096619771119 8.04095142384315 8.08737787699438 8.69861374077141 7.21805619386832 8.04375987011774 7.17956752539298 7.36837812408686 8.03647722783233 0.220186172120850 0.223873489738291 0.210344514594630 0.211729466899036 0.212748005761144 0.225684679370520 0.206687078223852 0.209466232168569 0.232211405049406 0.210250330378420 0.206687078223852 0.206687078223852 0.213948567903468 0.213853742392357 0.210442382815566 0.206687078223852 0.225009174547049 0.207384103097885 0.207493343514018 5 5 - 17377863 17378588 17378225.273 17377529 17381001 - gene protein_coding_gene TRUE TRUE AT5G43270.1|AT5G43270.2|AT5G43270.3 SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor|SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. The genes are characterized by the presence of the SBP-box, which encodes a protein domain, the Identical to Squamosa promoter-binding-like protein 2 (SPL2) [Arabidopsis Thaliana] (GB:Q9S840;GB:Q9SMY0); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.4); similar to putative squamosa promoter binding protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD10252.1); contains InterPro domain SBP; (InterPro:IPR004333) 0.920329979555643 4.23207894120878 0.00153342258456817 0.0244339936091425 6.96850468740221 14.6275184417851 0.920329979555643 0.329307647143263 AT5G63850_at 7.72596835214764 8.8342873748422 9.4485091020246 9.55713954337462 9.9256601452043 9.52744372762749 9.66220408674513 9.85754529007664 9.28516689461271 9.46136269658887 10.5309890163677 10.1095739076462 10.1528741341251 9.9087016668561 9.6995135111527 10.3917069277983 9.43127729378983 10.3637888441961 9.4442225938559 0.19246270287819 0.164345799838972 0.168879633539988 0.161052441011008 0.161139858725967 0.164383477845286 0.159435793367945 0.160301505115477 0.170872700432939 0.160717487697180 0.158880143517553 0.157163816563569 0.162717763634750 0.166894350054304 0.165212247303859 0.159119994915492 0.193874324981156 0.163665207863988 0.163503523941186 5 5 + 25570033 25570536 25570258.909 25568281 25570746 + gene protein_coding_gene TRUE TRUE AT5G63850.1 AAP4 (amino acid permease 4); amino acid permease Amino acid transporter whose expression is downregulated by dehydration. similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to AAP5 (amino acid permease 5), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G44100.1); similar to AAP2 (AMINO ACID PERMEASE 2), amino acid permease [Arabidopsis thaliana] (TAIR:AT5G09220.1); similar to amino acid transporter [Lycopersicon esculentum] (GB:AAO13689.1); similar to amino acid permease [Brassica napus] (GB:CAF22024.1); similar to amino acid carrier [Ricinus communis] (GB:CAA07563.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.635661310663593 4.23182161097488 0.00153407015016874 0.0244353318281458 6.96808257254692 19.0525799816357 0.635661310663593 0.207442389672675 AT5G66550_at 5.00508802711885 5.01624792561499 4.9177945267113 5.32434635120731 5.97061701790094 5.31933945118847 5.99759267009945 5.51468439461147 4.67970536532321 4.93603858683684 5.75434190935143 6.58912140222521 6.01208808637956 6.16087157287672 5.93177742751413 5.8688570784935 5.21627483178893 5.89827627782312 4.99872405391627 0.267637747657957 0.258614217338932 0.275493771393531 0.287024574313791 0.266109346940361 0.266875007337292 0.267347527813805 0.268883465716097 0.262790126407582 0.266914729373740 0.258614217338932 0.265580603133835 0.264413383775353 0.258614217338932 0.276484484311355 0.265387030382068 0.27564930304028 0.271305006680403 0.269130984809309 5 0|5 /|- 26577007 26578226 26577559.375 26576810 26578442 - gene protein_coding_gene TRUE TRUE AT5G66550.1 Maf family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42770.1); similar to Maf-like protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94173.1); contains InterPro domain Maf-like protein; (InterPro:IPR003697) 0.528541410169308 4.23035553094508 0.00153776498076963 0.0244851893918625 6.96567751540041 10.7834339998893 0.528541410169308 0.156972294769614 AT5G07070_at 3.57526698987532 3.39360508028928 3.56431313433155 4.22374274546999 3.27836526504115 3.55451922501489 2.94035785002416 3.02675729993172 3.15682176245226 2.64916845407884 3.30546944883879 3.58053901661396 3.24307710002787 3.76496761180207 3.30952523991920 3.40423573680769 3.80467139802524 3.57077648216271 3.11372489401011 0.179813923417228 0.177046812166592 0.181298104379934 0.191293230717249 0.178642237078984 0.190961510437300 0.187774805104707 0.178871167910254 0.192645447409261 0.180958599175618 0.178964289106631 0.181391244314044 0.182941941402155 0.181159340319634 0.186655659402768 0.186187204674420 0.183427043346447 0.183172935192288 0.178905474271784 5 5 - 2196828 2197235 2197040.182 2196435 2198115 - gene protein_coding_gene TRUE TRUE AT5G07070.1 CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); kinase Encodes CBL-interacting protein kinase 2 (CIPK2). similar to CIPK10 (CBL-INTERACTING PROTEIN KINASE 10), kinase [Arabidopsis thaliana] (TAIR:AT5G58380.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.472953835764283 4.22353017402530 0.00155508954962462 0.02475195130804 6.9544772809611 6.6801890109748 0.472953835764283 0.128524325517876 AT5G01530_at 13.8607420944359 13.937596114805 14.2192567213028 14.1567417562878 14.0689328730722 14.1991091462757 14.1254751438195 14.1257930779198 14.5694333286291 14.4323091256973 15.1400861529405 15.1233548438437 14.9726765871157 14.8463862462178 15.0675232159851 14.9021030663833 14.8620732296279 15.0704805619325 14.3817341445952 0.057845027678186 0.055741454070555 0.0576806823183525 0.0566818564658456 0.054881064187708 0.0597703257681987 0.0549817132404963 0.0563242207058054 0.0634415483253506 0.0590401744510549 0.0558948452643282 0.0554832603678441 0.0556556257284161 0.0589676968806621 0.0588291735470256 0.054881064187708 0.054881064187708 0.0575029729802576 0.0591471797144955 5 5 + 209410 210173 209816 208936 210444 + gene protein_coding_gene TRUE TRUE AT5G01530.1 chlorophyll A-B binding protein CP29 (LHCB4) Identical to Chlorophyll a-b binding protein CP29.1, chloroplast precursor (LHCII protein 4.1) (LHCB4.1) (LHCB4.1) [Arabidopsis Thaliana] (GB:Q07473;GB:Q8RWN1;GB:Q94AD5;GB:Q94K17); similar to LHCB4.2 (LIGHT HARVESTING COMPLEX PSII) [Arabidopsis thaliana] (TAIR:AT3G08940.2); similar to Chlorophyll A-B binding protein [Medicago truncatula] (GB:ABE80774.1); contains InterPro domain Chlorophyll A-B binding protein; (InterPro:IPR001344) 0.342767569094105 4.21982521344319 0.00156457928656982 0.0248938582403217 6.94839515839558 28.8163280431464 0.342767569094105 0.0283094498714461 AT5G63020_at 6.54941583367727 6.4882015784574 6.80559882987183 6.98563546585839 7.75800454409198 7.02233613857858 6.89396880039363 6.29514396136892 6.49872033733722 6.34708903602553 7.38896568040487 7.04017968824348 6.77874760175735 7.02107715868422 6.93762614569157 7.3129729566411 6.5378372794359 6.73105761630618 6.52831561172097 0.295914008588838 0.293130989627711 0.315901731957574 0.296208210912009 0.296494538444413 0.294635278296824 0.298843648417159 0.300473723983762 0.343322900314324 0.291775851947008 0.303569754527940 0.291775851947008 0.296433247643955 0.302237788911938 0.291775851947008 0.291775851947008 0.311661054012289 0.295175084015502 0.291775851947008 5 5 - 25300627 25301086 25300878.375 25300289 25303228 - gene protein_coding_gene TRUE TRUE AT5G63020.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g63020 (pNd11) [Arabidopsis Thaliana] (GB:Q8RXS5;GB:O04666;GB:Q9FM50); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63350.1); similar to RPS5 (RESISTANT TO P. SYRINGAE 5) [Arabidopsis thaliana] (TAIR:AT1G12220.1); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62353.1); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62351.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.548363777663448 4.21924274183428 0.00156607671900749 0.0249085429823173 6.94743881174335 13.5630879828323 0.548363777663448 0.167421740186953 AT5G57130_at 1.73837462731916 1.85671421997125 1.90027854393299 1.50548348791041 1.96066133394680 1.94512175321517 1.43827923604754 2.13089696578494 1.92438344715524 2.16135344080494 3.27187829368123 3.50700409648731 2.80175781740295 3.17853200820367 3.66912314351143 3.31613332308114 2.10174504503368 2.94741005749208 2.36483416964011 0.220154443204392 0.219404760497524 0.228346651638572 0.221103774855804 0.221191843641053 0.227810917122837 0.219673465452738 0.223043813801996 0.230885925269468 0.216959825757906 0.223331921036365 0.246287723881985 0.220456815831805 0.232773210179988 0.230439027284791 0.239552100393516 0.218585591695902 0.237078807528708 0.216977353257417 5 5 + 23166026 23166597 23166292.818 23162206 23166794 + gene protein_coding_gene TRUE TRUE AT5G57130.1 protein binding similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G29920.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28470.1); contains InterPro domain Clp, N terminal; (InterPro:IPR004176) 0.492913819024436 4.21863431155499 0.00156764249089030 0.0249243034987625 6.94643980010113 4.43417043383859 0.492913819024436 0.139502690255530 AT5G22380_at 1.33375599273415 1.26250375033406 2.52275064982142 2.39191349261838 1.54234034178326 1.58454574823217 0.800986981185952 0.612228684016819 2.10612155636437 1.13002555335270 0.795413756819288 1.13781450495008 1.32041352435516 0.79776711695721 1.42675567551650 0.875540891093582 1.06732576570445 1.35532410366246 0.966977650748997 0.184720395694425 0.189259648662073 0.193713259698119 0.194149001181967 0.187608338727270 0.182514515106423 0.198667299476083 0.186428146462557 0.192825934837679 0.194288487192797 0.183702323701428 0.182514515106423 0.192596137782357 0.188487169279828 0.188143644540058 0.182988562111232 0.190229067556475 0.184431542630284 0.190212681949313 5 5|0 -|/ 7408929 7409905 7409380.667 7408780 7410105 - gene protein_coding_gene TRUE TRUE AT5G22380.1 ANAC090 (Arabidopsis NAC domain containing protein 90); transcription factor Identical to NAC domain-containing protein 90 (ANAC090) [Arabidopsis Thaliana] (GB:Q9FMR3); similar to ANAC061 (Arabidopsis NAC domain containing protein 61), transcription factor [Arabidopsis thaliana] (TAIR:AT3G44350.1); similar to NAC-domain protein [Nicotiana tabacum] (GB:BAA78417.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.352010768303191 4.2164278312628 0.00157333456221313 0.0250056333824619 6.94281649404943 2.75542120719296 0.352010768303191 0.042250237320919 AT5G25460_at 10.3790660502314 10.4514142618470 9.6204556058557 9.67957938165046 10.7594909273453 10.5199062594147 10.5020635257568 10.6476341725014 11.2044721764349 10.9533451676930 12.7135427051675 12.8830454138912 12.5093416108825 12.2145861744905 12.9541290352254 12.2980779239048 11.2920059609617 12.125484103384 11.7544384315494 0.0891654099890315 0.083887214125226 0.0892467522184765 0.0865901292175108 0.0854041157571476 0.0883129905803818 0.0869234395882805 0.0856433505695318 0.0965767947988906 0.0882086202279175 0.0858046180087854 0.083887214125226 0.0860633785691704 0.0896593797369652 0.0887381907226946 0.0844685176832978 0.0959809333741262 0.0887633260386236 0.0890737539676115 5 5 + 8864702 8865331 8865017.818 8863366 8865680 + gene protein_coding_gene TRUE TRUE AT5G25460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain Protein of unknown function DUF642; (InterPro:IPR006946) 0.359752449205887 4.21531706739974 0.00157620820044931 0.0250421255956726 6.94099226243522 22.1588822103491 0.359752449205887 0.0511380223641652 AT5G64140_at 8.79955587062548 8.97612651746903 9.05849573301414 8.92494143478735 9.06387334933683 8.98956628763469 8.84176780172048 9.01787053126872 8.08725029386711 8.62374668951375 9.29818349107306 9.4983975859387 8.7496332807972 9.08866444842353 9.6706597881081 8.90809217106602 8.71240572341759 8.82864951017989 8.71849290680384 0.113988313152513 0.116679001009678 0.115924267636821 0.116185444122671 0.116867991581953 0.115284555592804 0.111324230017295 0.127180982494408 0.126793471106316 0.112178569414164 0.119127088877076 0.116133391290623 0.115345184996583 0.116221550688412 0.117362276797047 0.109050907944908 0.119104727291502 0.115372489203332 0.120908837457695 5 5 - 25684775 25684922 25684844 25684550 25685518 - gene protein_coding_gene TRUE TRUE AT5G64140.1 RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome Encodes a putative ribosomal protein S28. Identical to 40S ribosomal protein S28-2 (RPS28C) [Arabidopsis Thaliana] (GB:P34789); similar to 40S ribosomal protein S28 (RPS28A) [Arabidopsis thaliana] (TAIR:AT3G10090.1); similar to 40S ribosomal protein S28 (RPS28B) [Arabidopsis thaliana] (TAIR:AT5G03850.1); similar to ribosomal protein small subunit 28 [Helianthus annuus] (GB:AAM78552.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10101.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10104.1); contains InterPro domain Ribosomal protein S28e; (InterPro:IPR000289) 0.359114070368135 4.2136500757396 0.00158053117346690 0.0251016090547448 6.93825424488579 17.7444408807006 0.359114070368135 0.0506159464322069 AT5G48530_at 1.74553226209475 1.83133230010005 2.79516945457147 2.12130039666952 2.25631887682761 2.03360093713291 1.75756643393237 1.65600809129842 1.87075238987596 1.41948975815158 1.99704711692514 1.89217893587712 1.56158165125594 1.95408192788547 2.11366111464471 2.43513923390248 2.15726456633935 1.99432499849592 1.62194804475912 0.217811411421954 0.218691033399006 0.217240875685513 0.219873090760757 0.211808516405506 0.207122442120293 0.206961102201918 0.224490540393979 0.223118549892935 0.220635504673089 0.206961102201918 0.221139344221735 0.211784628480868 0.225113763527731 0.206961102201918 0.211539410730563 0.214288964568159 0.221835248111501 0.207809389165102 5 5 - 19685800 19686026 19685920.909 19684122 19686056 - gene protein_coding_gene TRUE TRUE AT5G48530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07440.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22058.1) 0.464875428340431 4.20916176439602 0.00159223249578487 0.0252781871811419 6.93088056304504 3.84988193112571 0.464875428340431 0.124956795766988 AT5G60290_at 1.66266687098448 1.57664693693011 2.37213347054715 2.25415941732531 2.71371687503344 2.12950669847014 2.07810112169096 1.73815735914659 1.58268335897564 2.26150186764508 1.94647885064218 1.62915692499242 2.63185807396753 2.26895884747104 1.74114084421912 1.97340981828319 2.18372229603439 1.87976284051448 1.32969257048407 0.207657305495357 0.206844795964193 0.210915590948760 0.212610171910466 0.203854556702297 0.222260104351903 0.207088761526252 0.205669907713584 0.206065231503862 0.214840134995395 0.203254306196051 0.204249906942266 0.203254306196051 0.207613199791882 0.217037622109055 0.218749594871853 0.207963884832084 0.209184282928682 0.204848026281255 5 5|0 +|/ 24280110 24281017 24280536.143 24280090 24281069 + gene protein_coding_gene TRUE TRUE AT5G60290.1 unknown protein 0.455335586401627 4.20800667142145 0.00159525856395509 0.0253169586415703 6.92898250866126 3.94385459095793 0.455335586401627 0.119668344652789 AT5G46450_at 6.76402711209657 7.0123537853726 7.71142175471193 7.39975952496832 8.34318729623668 7.52050353465948 6.95709993885 6.1833266941161 6.56166874808191 6.0771058569133 6.68327017671508 6.11511132570092 6.88234303831022 6.90605070868865 5.39541808693011 7.22395552231104 6.32262523582083 6.00773248744525 5.95159384789375 0.2050157640988 0.196108496549261 0.212287006194599 0.200981714371415 0.196108496549261 0.209097289492906 0.203377821211324 0.209263043248615 0.206266107132978 0.196108496549261 0.200123715631102 0.200409604436387 0.197827201597209 0.205898129436918 0.196108496549261 0.196108496549261 0.216259899524977 0.215373128542864 0.198045789606984 5 5 + 18856212 18856711 18856426.364 18852845 18856773 + gene protein_coding_gene TRUE TRUE AT5G46450.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46470.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.629894991739611 4.19614286062709 0.00162669003028280 0.0258063341063539 6.90947851523791 13.5558863586447 0.629894991739611 0.207256574780653 AT5G05000_at 7.03763449670425 7.35553359508792 7.17322050804884 7.18173188708646 7.77556654758942 7.40690922434163 7.37594039690175 7.00962191444637 7.29441784832585 7.08275904779249 7.93357502966615 8.17228740490999 7.59253557884373 7.99889660952134 8.09312182872814 7.95367420727588 7.67422093575301 7.67890023625167 7.27672850568579 0.135994095331148 0.134424055505522 0.133993384154301 0.139659780058627 0.134239684703011 0.13381516521178 0.138667931472074 0.136330628906424 0.144423242073954 0.134819887740052 0.136329495977456 0.136581593088278 0.134092546161891 0.133638951847352 0.132814153502908 0.135952924469497 0.142431644228927 0.142605683805025 0.140387791997134 5 5|0 -|/ 1474276 1475089 1474722 1474114 1476410 - gene protein_coding_gene TRUE TRUE AT5G05000.1|AT5G05000.2|AT5G05000.3 ATTOC34/OEP34 (Translocase of chloroplast 34) Outer membrane protein that may function in import of nuclear encoded proteins into the chloroplast. Identical to Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (AtToc34) (TOC34) [Arabidopsis Thaliana] (GB:Q38906;GB:Q8L9G5;GB:Q9FF74;GB:Q9GDD2); similar to TOC33 (PLASTID PROTEIN IMPORT 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G02280.1); similar to AAA ATPase; Chloroplast protein import component Toc34 [Medicago truncatula] (GB:ABD28666.1); contains InterPro domain AIG1; (InterPro:IPR006703); contains InterPro domain Chloroplast protein import component Toc34; (InterPro:IPR005688) 0.429428726291106 4.19121523005224 0.00163993519200058 0.0259977231019624 6.90137255797062 14.8420797943442 0.429428726291106 0.105439826939564 AT5G13550_at 6.88603487319792 6.55452613246692 7.0458807145138 7.30005182673529 7.18208651583269 6.4269158218117 6.74481554427417 6.15332644505909 5.35063276651207 6.27960557040013 6.45167487765117 6.21544156943838 6.02424932838715 6.70202864799937 6.00085037717166 6.42390215024091 6.67204004533533 6.54035130587504 5.28078988781164 0.194611656745554 0.193442702680971 0.199493732306728 0.195816036333483 0.203702780937310 0.196696469571354 0.197756518111179 0.194493792514981 0.195051079426490 0.203673287175753 0.197288673692921 0.194227759026694 0.195514189516065 0.196530516384941 0.196673612148843 0.192959476442488 0.204973435988983 0.190510457594709 0.203101115292252 5 5|0 -|/ 4355440 4356166 4355736.6 4355279 4359555 - gene protein_coding_gene TRUE TRUE AT5G13550.1 SULTR4;1 (Sulfate transporter 4.1); sulfate transporter Encodes a sulfate transporter. Identical to Sulfate transporter 4.1, chloroplast precursor (AST82) (SULTR4;1) [Arabidopsis Thaliana] (GB:Q9FY46;GB:O22123;GB:Q8GW68;GB:Q9FNB8); similar to SULTR4,2 (sulfate transporter 4,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G12520.1); similar to sulfate transporter [Brassica napus] (GB:CAC94921.1); similar to At3g12520-like protein [Boechera stricta] (GB:ABB89769.1); similar to sulfate transporter [Brassica oleracea var. acephala] (GB:CAD87011.2); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) 0.572932925247472 4.19103935650172 0.00164041001222446 0.0259977231019624 6.90108319194576 12.7946180822383 0.572932925247472 0.181058778491805 AT5G01500_at 6.31985357754655 6.48927499174501 5.88750514451535 6.06031614461208 6.24152141126629 5.26616233272084 7.17856320142483 6.26421323520701 2.82658617769619 4.71564791982597 6.18058386208822 6.41364200581604 5.45538304456603 5.98149168808347 6.19600086448342 5.56701755985461 5.36894664138006 5.62119419066742 3.7578675563943 0.213896204638142 0.215945498134582 0.22301288481598 0.213896204638142 0.214563148300483 0.223395753606382 0.215868351655802 0.222715717140352 0.244831094314229 0.235320998013158 0.217730139206466 0.221703803210103 0.213896204638142 0.217911803116169 0.213896204638142 0.21426270337021 0.225484444396997 0.223794408490471 0.225750062373366 5 0|5 /|+ 200618 201209 200842.667 198942 201551 + gene protein_coding_gene TRUE TRUE AT5G01500.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G51870.1); similar to Os01g0265200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042669.1); similar to Mitochondrial ADP/ATP carrier proteins (ISS) [Ostreococcus tauri] (GB:CAL56121.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.691115968804856 4.19098640541565 0.00164055299681413 0.0259977231019624 6.90099607041444 11.0207927715912 0.691115968804856 0.235120631587767 AT5G05570_at 5.71888560495597 6.09417854699962 6.28419247354456 6.0197331481532 6.74913371990264 6.03059123828141 5.64823770222126 5.12345153353975 6.02679477057934 6.49880284886986 7.02139131409568 7.38870872363967 6.53097327919246 6.91461398511796 6.15617826263427 7.11362871949509 6.48240702244845 6.33348950610558 6.23723426197028 0.252523030982163 0.247746995907868 0.267790413936953 0.262715833699640 0.241097646455843 0.259129039439638 0.245909457377271 0.246881543161908 0.258508507298345 0.25733707745798 0.246368051784097 0.248554640199017 0.246006872044578 0.260635394183227 0.247936421600138 0.244728548211860 0.26338306388964 0.244363069274278 0.248611573189878 5 5|0 +|/ 1662747 1663661 1663123 1656567 1663930 + gene protein_coding_gene TRUE TRUE AT5G05570.1 transducin family protein / WD-40 repeat family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35560.1); similar to Os07g0693700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060732.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC75571.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.556560427912976 4.18991376256232 0.00164345228286449 0.0260341524689053 6.89923115628826 12.4570260686486 0.556560427912976 0.173269753717548 AT5G16010_at 10.5265455440835 10.6428921714577 10.9434234564997 10.9858772324665 11.2525734336606 10.855164582682 11.1135578819371 11.0653265393394 10.7589111295532 10.7065106255807 11.3954090815622 11.1859520294524 11.1726510464028 11.3113009927344 11.1123846715662 11.0883726251298 11.1112307913822 11.3300038842157 10.4050589180817 0.091343598607847 0.0799489939113956 0.0897132340359214 0.0863825369520501 0.0800200904629096 0.0920070374239389 0.0835521319565478 0.081884032844618 0.0843468072052396 0.0893229406843536 0.0827037522390501 0.0854862744146 0.0869251454711615 0.085064496826776 0.0869122892399028 0.082298001052812 0.0943216610629245 0.0830173650891348 0.090432669546875 5 5|0 +|/ 5228195 5228985 5228724.2 5227927 5229119 + gene protein_coding_gene TRUE TRUE AT5G16010.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to ATTSC13/CER10/ECR/TSC13 (ENOYL-COA REDUCTASE), 3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid elongase/ trans-2-enoyl-CoA reductase (NADPH) [Arabidopsis thaliana] (TAIR:AT3G55360.1); similar to hypothetical protein DDBDRAFT_0190926 [Dictyostelium discoideum AX4] (GB:XP_646664.1); similar to Os07g0162100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058945.1); contains InterPro domain 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal; (InterPro:IPR001104) 0.381049362344999 4.18683679973945 0.00165179894135748 0.0261568162811712 6.8941675925571 21.8416234542879 0.381049362344999 0.0725177341360194 AT5G66750_at 1.27344393939979 1.12517482135133 1.80272750616152 1.63238231120450 1.08318118419922 0.91150807698906 1.7944728067463 1.38890994429061 1.47456721824507 1.57375061796620 2.37208823454566 2.98008550608456 2.00097696383532 2.01813110301161 2.76868592009414 1.95172949561438 1.70624359263638 2.08090793460825 1.15090779336522 0.179657175059830 0.179657175059830 0.184555085733946 0.182488952581062 0.180494296180462 0.185899599758239 0.180269746180022 0.181599550203248 0.182599785116366 0.187068455504671 0.185363341534595 0.18426671441638 0.183565397036704 0.185390130168441 0.188192731356610 0.179657175059830 0.18885836856203 0.182823224685353 0.184858940347888 5 5|0 +|/ 26669345 26669975 26669719.625 26666177 26670299 + gene protein_coding_gene TRUE TRUE AT5G66750.1 DDM1 (DECREASED DNA METHYLATION 1); helicase Protein is similar to SWI2/SNF2 chromatin remodeling proteins. Involved in gene silencing and maintenance of DNA methylation and histone methylation. similar to CHR17 (CHROMATIN REMODELING FACTOR17), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT5G18620.2); similar to chromatin remodeling factor DDM1a [Oryza sativa (japonica cultivar-group)] (GB:BAF34942.1); similar to chromatin remodeling factor DDM1b [Oryza sativa (japonica cultivar-group)] (GB:BAF34943.1); similar to putative chromatin complex subunit A101 [Oryza sativa (japonica cultivar-group)] (GB:BAD38081.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.398531804484928 4.18505329003679 0.00165665725995021 0.0262241716054458 6.89123206439774 3.19377405895743 0.398531804484928 0.0856496655695266 AT5G04610_at 2.05022021673306 2.12973783814713 2.21290632732714 2.58370511814778 2.26876472344302 2.24967689876771 2.29504354564121 1.83756920618136 2.04332571476228 1.80267718595012 2.51881317397811 2.54717760648287 2.65998645298103 2.20738378677262 2.95016806085766 2.42148303150634 2.3670921022091 2.37280785744581 1.87665809842969 0.188850238255716 0.188689042659322 0.186130997507810 0.187847937889443 0.192225972704905 0.187932304948298 0.193696133141968 0.187993037961513 0.193733198850506 0.195178729551063 0.190099662627003 0.192932663296072 0.187814997624741 0.186130997507810 0.195638549067759 0.190161019392694 0.19925776906664 0.192109724936821 0.186130997507810 5 5 - 1325641 1326012 1325813.545 1325589 1326929 - gene protein_coding_gene TRUE TRUE AT5G04610.1 spermidine synthase-related / putrescine aminopropyltransferase-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31740.1); similar to Os08g0520400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062267.1); similar to Os04g0379300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052588.1); similar to unnamed protein product [Homo sapiens] (GB:BAB55240.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) 0.424340453947112 4.181813254946 0.00166552151936951 0.0263548669416929 6.88589822810838 4.41003682200349 0.424340453947112 0.102885605779263 AT5G38520_at 10.3840986391162 10.6456969721881 10.8838939064291 10.8515615152394 11.0843044330877 10.7003800458003 11.4623837271505 11.3928021934149 10.6539455147993 10.8293491638478 11.7428415052380 11.8245023165183 11.7394028463982 11.653873631994 11.6293848608728 11.8799579978954 11.3921631085416 11.3521300357254 10.8477957816481 0.091441125596914 0.0928886323452037 0.0984044316685603 0.0930165250189382 0.0933784071112262 0.100445128007426 0.091927616891118 0.091984505269746 0.102037664651700 0.0929124942721761 0.0925596683344855 0.0912779745898284 0.0912779745898284 0.0953553714255255 0.0964264487766378 0.0912779745898284 0.0994286906965865 0.0986464184477673 0.0927637083136469 5 0|5 /|+ 15439832 15440400 15440183.889 15438803 15440661 + gene protein_coding_gene TRUE TRUE AT5G38520.1|AT5G38520.2 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G19850.1); similar to Os05g0419000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055569.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57254.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089)|similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G19850.1); similar to Os05g0419000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055569.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57254.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.391770738318952 4.17505708765187 0.00168416557997267 0.0266401640006101 6.87477200957447 22.1400462747181 0.391770738318952 0.081486256802899 AT5G08430_at 7.35106756315317 7.36050179293616 7.6726083253579 7.64789609518556 8.16637646685416 7.84666803304816 7.82862157908787 7.74583884992796 7.30998569539995 7.89641338306857 8.07921136580089 8.47669627332875 8.27384850284876 8.31115006191676 7.7315739852985 8.5009532517466 8.39825809569193 8.3001201716912 8.1867674041516 0.185911827703211 0.18757873012346 0.194950467473592 0.192998209814422 0.183389544782136 0.190438525425555 0.181943653293588 0.185803758252780 0.240981577118245 0.185802827601063 0.186456024167119 0.181098891753174 0.181851234044023 0.191087939293132 0.20675638450614 0.183278585251098 0.195517353852255 0.189167495973243 0.186565350512884 5 5|0 +|/ 2718932 2720069 2719574.8 2716701 2720213 + gene protein_coding_gene TRUE TRUE AT5G08430.1 SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein Identical to Protein At5g08430 [Arabidopsis Thaliana] (GB:Q9FT92); similar to zinc finger (C3HC4 type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G63700.1); similar to CPRF interacting protein [Petroselinum crispum] (GB:CAC00636.1); similar to Os01g0884500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045018.1); contains InterPro domain Plus-3; (InterPro:IPR004343); contains InterPro domain GYF; (InterPro:IPR003169); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) 0.361567043251104 4.16455618410204 0.00171357855165236 0.027095533687317 6.85746810205064 15.7307966504008 0.361567043251104 0.0573347003965911 AT5G63380_at 6.30221456529122 6.36553145563544 6.52598517693291 6.64567129489517 7.02691798918289 6.85601583907729 7.170807026135 7.33095427311838 7.27152343824547 7.07264050588277 8.0210775980942 8.0062647694142 7.53095869496909 7.87219995115478 7.50625366740877 8.28227226128771 7.15224439832057 7.80359564994316 6.78074108812822 0.194897262530355 0.185332861660764 0.196830766302689 0.200135537825147 0.185332861660764 0.186323998243281 0.187972144791575 0.187522953681159 0.197896472162013 0.187698404069658 0.190766097483417 0.196002986365346 0.187851104055140 0.198427694975638 0.196452556091584 0.185332861660764 0.196137415922110 0.196449247162432 0.188017515810471 5 5|0 -|/ 25404840 25406000 25405559.333 25404637 25407289 - gene protein_coding_gene TRUE TRUE AT5G63380.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. similar to OPCL1 (OPC-8:0 COA LIGASE1), 4-coumarate-CoA ligase [Arabidopsis thaliana] (TAIR:AT1G20510.1); similar to putative 4-coumarate:coenzyme A ligase [Oryza sativa (japonica cultivar-group)] (GB:BAD82768.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 0.350747054024479 4.15569845088432 0.00173880715403054 0.0274844311755628 6.84286174993273 14.1847588948216 0.350747054024479 0.0468171179359523 AT5G10470_at 9.47544897060205 9.5954582297093 10.1902135969514 10.1511562214529 10.2322702019394 10.0686548252593 10.4044226765063 10.4900937773133 10.0858390565299 10.2372087313913 10.7027952369278 10.5783225675609 10.8847365017028 10.6047232032285 10.4247018372615 10.8024151779418 10.4751641817711 10.8020223773265 10.1011081011091 0.0825960820623979 0.0847838625630743 0.0848614996232617 0.0849499824329052 0.0815437006809528 0.0870234877935665 0.0838451318398426 0.0824383256896098 0.094878217535449 0.0818143517471509 0.0811247036854186 0.0807963249140083 0.0801937282280597 0.0835910059103294 0.0843463134552934 0.0802434417944838 0.0897956490255096 0.0854994348118603 0.0804521384783856 5 5 - 3290162 3290782 3290491.545 3289926 3297374 - gene protein_coding_gene TRUE TRUE AT5G10470.1|AT5G10470.2 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G65460.1); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752)|similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G65460.1); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.343596318494849 4.1480021020759 0.00176104362331896 0.0278257673364518 6.8301630151036 20.476337528371 0.343596318494849 0.0387106030673387 AT5G44510_at 5.09599372064138 4.64124254944892 5.67712976257457 5.56552674708938 5.43861203257627 4.93224914966575 5.0529810895194 4.97213140766325 4.79191785810402 5.03425920573883 5.44047151879081 5.69537754511347 5.57395844020272 5.41415127351040 5.18482411031358 5.5786518879387 5.28718278780931 5.05176886684744 5.07943054560818 0.225210601727406 0.218604872640467 0.229518962426569 0.219381764307632 0.214637682533965 0.219321604406543 0.221875123215356 0.219886619179687 0.235461302858696 0.226658019917020 0.214203409387621 0.220382727298071 0.218167563672512 0.224659061761199 0.226796314973728 0.224767674508913 0.234246429728026 0.223323085168512 0.226816902178662 5 5|0 -|/ 17946914 17948123 17947811.75 17946900 17951415 - gene protein_coding_gene TRUE TRUE AT5G44510.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) [Arabidopsis thaliana] (TAIR:AT3G44480.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.448777332578523 4.13937441717648 0.00178632521201715 0.0282046774410748 6.81591935302043 10.3579003942138 0.448777332578523 0.120169475178524 AT5G57300_at 5.72845241604163 5.62076925526437 6.06433827184505 5.73607860172727 5.8190084008129 5.94280909253148 5.56084480890484 5.67718776564043 5.32561737460752 5.49655088232705 6.09252422195727 6.20353823670119 6.11741628088673 6.22372981445972 6.01887318515084 6.07501514132884 5.62133586149822 5.77682922992665 5.74079694524687 0.195334514661951 0.191672809527706 0.191672809527706 0.196662025127662 0.191672809527706 0.201321316679631 0.191672809527706 0.198192949258831 0.209887347947974 0.197103090315193 0.196409033139200 0.199779384053280 0.192014607835564 0.191672809527706 0.192893033140445 0.191880649388375 0.199159881667496 0.202313275290266 0.209846051232489 5 5|0 -|/ 23225933 23227131 23226547.5 23225789 23228316 - gene protein_coding_gene TRUE TRUE AT5G57300.1|AT5G57300.2 UbiE/COQ5 methyltransferase family protein|methyltransferase similar to UbiE/COQ5 methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G23360.1); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE77912.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain UbiE/COQ5 methyltransferase; (InterPro:IPR004033) 0.369457188013946 4.13764656732335 0.0017914338027653 0.0282750412815522 6.81306575734795 11.5372591502039 0.369457188013946 0.0666232067343316 AT5G04810_at 8.9357900121144 8.93093282466747 9.46708826368477 9.55724073221928 10.0739841350567 9.75606596965656 9.36307386495364 9.0707363230682 9.1282670544332 9.56027209675484 9.45263520738741 9.69556737066589 9.55880103432723 9.50317836229287 9.33636839391277 9.88835093291346 9.87283058676616 9.57257600635751 9.76839645751164 0.0890444661272705 0.085216433497887 0.0911108252843776 0.087239269869404 0.0930382601359961 0.0881598141511248 0.0863691761622799 0.0869193964426282 0.0983603324079023 0.0908888409547979 0.0869977710585443 0.085203087493312 0.0919809450948657 0.0922298785782576 0.0892137757689782 0.0888701483385482 0.0863041609664221 0.0880455651072159 0.0879418628407216 5 5 + 1393112 1393617 1393404.818 1390035 1393931 + gene protein_coding_gene TRUE TRUE AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to Os04g0684500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054310.1); similar to H0913C04.4 [Oryza sativa (indica cultivar-group)] (GB:CAJ86163.1); similar to pentatricopeptide repeat protein [Zea mays] (GB:ABF57644.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.381427401440709 4.13737325875338 0.00179224327110419 0.0282775235350021 6.8126143482003 18.9422058605415 0.381427401440709 0.0763569770163899 AT5G25900_at 7.87420182755906 8.42558126367357 7.56426665676643 7.7024519806612 9.3123257188222 9.03178368612799 7.12090768030965 7.65309182760376 7.2770875162145 8.56646064792358 8.58805153066876 8.99967937431483 8.94261897568228 7.99882417650202 7.93614477280138 7.49520911740609 8.18782063949534 8.4491643863934 8.0933313424526 0.178494466968160 0.176372774269564 0.187376006911305 0.192829743847130 0.179991336486387 0.17528308533423 0.184148009699750 0.183616483820038 0.208912815421891 0.177368071701122 0.183361642179001 0.175728884009528 0.177955825302532 0.192686271579469 0.185323947081093 0.184303661827156 0.200858662589423 0.181627999115193 0.176738696850004 5 5 + 9037620 9038236 9037920.636 9036021 9038409 + gene protein_coding_gene TRUE TRUE AT5G25900.1 GA3 (GA REQUIRING 3); oxygen binding Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway. Identical to Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3) (KO1) [Arabidopsis Thaliana] (GB:Q93ZB2;GB:O81188;GB:Q9S7C8); similar to CYP71B26 (cytochrome P450, family 71, subfamily B, polypeptide 26), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26290.1); similar to cytochrome P450 monooxygenase CYP701A16 [Glycine max] (GB:ABC68411.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.48999532346787 4.13373900228824 0.00180304344608147 0.0284375772748760 6.80661101437943 16.2374008087846 0.48999532346787 0.143232220101386 AT5G62190_at 9.5704276226169 9.6271267893513 9.83265556003834 9.73575876175375 10.1383800663826 10.0869498053665 9.04864775001205 9.19587110914796 9.02201558161232 8.95183976201667 9.02090500269452 9.1476592783866 9.34623412970895 9.03646975778925 9.1402339569893 9.02359556085543 9.40524409695057 9.05419140026411 9.19862771784143 0.110184998520587 0.106264157792804 0.105892085486828 0.115276416588649 0.109535789719287 0.110794149166663 0.108491390066838 0.108874963956176 0.130123638649870 0.116170565712327 0.112782598675748 0.107603615847105 0.110372240471943 0.112816442163826 0.108054930905625 0.109790165771397 0.112932459758616 0.114198211607569 0.113146581881237 5 5|0 -|/ 24997815 24998601 24998270.875 24997494 25001199 - gene protein_coding_gene TRUE TRUE AT5G62190.1 PRH75 (plant RNA helicase 75); ATP-dependent helicase DEAD/DEAH box RNA helicase PRH75 Identical to DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) (RH7) [Arabidopsis Thaliana] (GB:Q39189;GB:Q94BX7;GB:Q9LVB7); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.2); similar to RNA helicase [Vigna radiata] (GB:AAF40306.1); similar to DEAD-box ATP-dependent RNA helicase 7 (GB:Q41382); similar to Helicase, C-terminal [Medicago truncatula] (GB:ABE79355.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain GUCT; (InterPro:IPR012562); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 0.338620012367305 4.13288409082361 0.00180559392777776 0.0284674478734154 6.80519858510522 18.7566326839728 0.338620012367305 0.0332533325347025 AT5G18340_at 1.71001857612284 2.08839781251377 2.76501998194147 2.39141406264625 2.97420894530973 3.10059736261785 2.60161553652726 2.29264031663964 2.16296604807608 2.63505763613372 2.43474121532454 2.33158650274670 2.85430575282277 2.70672441528816 2.45935226966119 2.95415197659405 3.01961925212150 2.90190262640946 2.65873889248883 0.207467197659137 0.197644596889079 0.1953346711619 0.218132295781851 0.199711820253968 0.196791251458956 0.197404824864182 0.205548854057147 0.204149210421379 0.204276152488522 0.197759104173385 0.202818293848389 0.200198498819834 0.206615090304879 0.199849717384127 0.19859712097025 0.202701823445809 0.203583427491353 0.19869511825666 5 5 - 6070805 6071149 6070978.1 6070642 6072200 - gene protein_coding_gene TRUE TRUE AT5G18340.1 U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G18320.1); similar to U box [Medicago truncatula] (GB:ABE90370.1); contains InterPro domain U box; (InterPro:IPR003613) 0.428426251741392 4.13059920854146 0.00181242902784432 0.0285648245707836 6.80142323401988 5.08718183775848 0.428426251741392 0.108651864269919 AT5G55120_at 5.27893078091359 5.81297192454741 4.96043323399192 4.90342274456122 4.81047019257822 4.58909934450105 5.03782136712643 5.02554788126703 3.66175392350436 5.00560418405791 5.78762325877871 6.10162793914596 5.4271296559657 5.69747447568325 5.61854238298395 6.12538180734973 5.64522636889458 5.45055158242603 4.61711627011822 0.210689480987572 0.214425690087976 0.211936293608418 0.210825584216851 0.206322927048639 0.210415285541611 0.225919191555848 0.218154698789581 0.229660872898634 0.215753833621958 0.210208974244194 0.219469517789834 0.217268201828749 0.212345303957896 0.218455021340675 0.209314734025104 0.219212374788233 0.216265028039902 0.216989274093241 5 0|5 /|+ 22388275 22388890 22388500.4 22386321 22389093 + gene protein_coding_gene TRUE TRUE AT5G55120.1 similar to VTC2 (VITAMIN C DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT4G26850.1); similar to unknown [Xerophyta humilis] (GB:AAT45011.1); similar to Os12g0190000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066338.1); contains domain SUBFAMILY NOT NAMED (PTHR20884:SF3); contains domain FAMILY NOT NAMED (PTHR20884) 0.415287474227238 4.1287464059556 0.00181799146250906 0.0286420799197127 6.79836137084876 10.1322635885843 0.415287474227238 0.100551435882347 AT5G38730_at 2.49934764165927 2.70186718465147 3.35351376927544 3.46392477215232 3.50194889816219 3.36473790748048 3.14502976722298 2.31410263776361 2.41181791988364 2.64200830810083 2.41258313006077 2.63474753232228 3.32068116508172 2.5060010742708 3.16449751107029 2.71346491071858 2.60509755931483 2.73613714646549 2.47269275495461 0.218296600404112 0.213340922870234 0.213576795717350 0.214012452169386 0.219754540607002 0.219153294095921 0.209340981918729 0.209340981918729 0.211418488560564 0.212222318600873 0.218322947434962 0.21342590251223 0.217105043629872 0.211439324182881 0.211429988726207 0.213347728326333 0.222926134726230 0.216070020077403 0.209340981918729 5 5 + 15529456 15529837 15529657.818 15528131 15529921 + gene protein_coding_gene TRUE TRUE AT5G38730.1 pentatricopeptide (PPR) repeat-containing protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD23061.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.504378060813338 4.12823791242085 0.00181952117010814 0.0286557674407275 6.7975209863178 5.67830452961736 0.504378060813338 0.151110665080258 AT5G17710_at 8.54350151295766 8.61650091611712 9.01350199938972 8.97661329353305 9.11552758221744 8.89577691774874 9.04977759196823 9.2780252548694 9.01309665516064 9.21141339896547 9.68405518397586 10.0049496543909 9.52071733621293 9.62910646510371 9.95781836354912 9.7995086251686 9.33144633694725 9.45707634388386 9.03619889905001 0.121517104076950 0.118341959798461 0.126407832041735 0.119581207194244 0.122349405063644 0.128669230122558 0.123937052745498 0.120270667693622 0.127927154043823 0.12719333749547 0.119594860747918 0.118112395182193 0.126089615331376 0.119892747264247 0.119874635557584 0.119284808473813 0.126069120654223 0.122342327418545 0.128683017970968 5 5 - 5839585 5840604 5840155.364 5839345 5841726 - gene protein_coding_gene TRUE TRUE AT5G17710.1|AT5G17710.2 EMB1241 (EMBRYO DEFECTIVE 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization similar to co-chaperone grpE family protein [Arabidopsis thaliana] (TAIR:AT1G36390.2); similar to Molecular chaperone of the GrpE family (ISS) [Ostreococcus tauri] (GB:CAL54976.1); similar to Os04g0431100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052822.1); similar to Os02g0612000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047409.1); contains InterPro domain GrpE protein, head; (InterPro:IPR009012); contains InterPro domain GrpE protein; (InterPro:IPR000740) 0.357292716753061 4.12366037329517 0.00183335262232769 0.0288544848693485 6.78995436373065 18.3161470201232 0.357292716753061 0.0566280342226665 AT5G01480_at 1.26891058777169 1.41570695581599 1.62341862559713 1.46005131722025 1.73961131980171 1.56783348643840 1.6601848515751 1.49358587763123 1.43868965807631 1.92921022765517 2.15058396490906 2.32607901897540 2.57220061981683 2.36690702271269 2.09516923936414 2.39516584934634 2.26143589624608 1.85699608257037 1.66450969557385 0.194517193852278 0.200606853570761 0.196681721087235 0.209164479086077 0.203256461218501 0.201433151746149 0.194414841260464 0.199087707025579 0.197001045413031 0.196768926235351 0.201929712832728 0.203473976104148 0.200944936337940 0.208284333046860 0.206111154659257 0.198496460930398 0.210015450344569 0.212959744646695 0.205970997229965 5 5 + 193638 194201 193918.455 192989 194230 + gene protein_coding_gene TRUE TRUE AT5G01480.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G02610.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.356864485186686 4.12362171247851 0.00183346990687278 0.0288544848693485 6.78989044749423 3.4939314138203 0.356864485186686 0.0562097141066576 AT5G57590_at 2.91176783177382 2.18202080885033 3.47488224069594 3.21209189527902 3.28515350078626 3.67561556929967 3.22900409284989 3.23840532098248 3.41660139615957 3.63982251879511 3.82890062436827 4.51626283280769 4.01822067726045 4.14806386618098 4.36869521100183 4.38164970130699 4.08562860934063 3.78268448709637 3.92590856702395 0.208931132502953 0.205870729767731 0.207198034558236 0.209333114502541 0.206824543108607 0.21498231630439 0.209387316803248 0.207313819977287 0.213204643386120 0.210473981569202 0.211327536954585 0.208809430955055 0.211082894795418 0.210349099298185 0.204294455574836 0.204341747911834 0.213091606870874 0.205148368638729 0.207641511501028 5 5 - 23335864 23336777 23336377.818 23335734 23338765 - gene protein_coding_gene TRUE TRUE AT5G57590.1 BIO1 (BIOTIN AUXOTROPH 1) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to Os08g0245400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061354.1); similar to Alanine-glyoxylate aminotransferase AGT2 (ISS) [Ostreococcus tauri] (GB:CAL56482.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814) 0.50106102253931 4.11411001523477 0.00186256525321337 0.0293017410440352 6.77415993324456 7.05213803014631 0.50106102253931 0.150282656178043 AT5G57930_at 10.1763244381975 10.2959790116824 10.6804525464181 10.7454592680022 10.8309711367547 10.6939160820119 10.5529166668317 10.5418749353476 10.4140077362126 10.6995713317250 10.8937568881625 10.9986985828274 10.7631090807524 10.8907937394619 10.9621249104414 11.1368638815284 10.7339816112318 10.8692629776914 10.6220996831718 0.070307542095544 0.0688948186362285 0.0704538516767586 0.0697979086245003 0.0685782332968995 0.0719431968835157 0.0700147564865174 0.0685782332968995 0.0777648727546123 0.0694432741242727 0.0704083265115058 0.0685782332968995 0.0712386505511871 0.0738538166946191 0.0710418273423667 0.0693981363338484 0.072038065651498 0.0718490552436308 0.0715265409856222 5 5 + 23473018 23473483 23473246.455 23471830 23473719 + gene protein_coding_gene TRUE TRUE AT5G57930.1|AT5G57930.2 APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) ACCUMULATION OF PHOTOSYSTEM ONE 2 Identical to APO protein 2, chloroplast precursor (Accumulation of photosystem I protein 2) (APO2) [Arabidopsis Thaliana] (GB:Q8W4A5;GB:Q94JR8;GB:Q9FJM2); similar to APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1) [Arabidopsis thaliana] (TAIR:AT1G64810.2); similar to H0525G02.2 [Oryza sativa (indica cultivar-group)] (GB:CAJ86305.1); similar to Os02g0732900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048031.1); similar to OSJNBa0008M17.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04336.2); contains InterPro domain Protein of unknown function DUF794, plant; (InterPro:IPR008512) 0.336720185295462 4.1078765522335 0.00188189445299810 0.0295950881876957 6.76384534093041 21.3070535320134 0.336720185295462 0.0334891398256385 AT5G52970_at 8.8858250944492 8.69200429003946 8.38539892836812 8.45305095955617 9.71467641915425 8.99903215384088 9.03491456372594 9.12566309877724 9.01179159044984 9.3015557355843 10.1379821846058 10.3740170627999 9.6507796784831 10.0614512676990 10.8727317017860 10.2153209281645 9.5711418839142 9.84547517617821 9.04765497249468 0.105570406902812 0.100403558312073 0.109264877721891 0.113804744904715 0.106391651583881 0.106244526642642 0.104293968300672 0.102809267814747 0.104096357375435 0.0996783801421763 0.100908133070368 0.100909799164830 0.0994749642199768 0.109002739369579 0.0994749642199768 0.0994749642199768 0.105836978030551 0.103256805962019 0.109546340279537 5 5|0 +|/ 21496980 21497997 21497514.143 21496825 21498452 + gene protein_coding_gene TRUE TRUE AT5G52970.1 thylakoid lumen 15.0 kDa protein similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58595.1) 0.462108119713054 4.10642617883677 0.00188642189761905 0.0296555313331392 6.76144475028314 18.5170439809706 0.462108119713054 0.129793918138359 AT5G19850_at 7.30633357758774 7.0265374762501 8.36755980130323 8.19130361836978 7.86334458246411 7.66187050895375 9.01395357097567 8.67373742401459 7.8969749008043 7.89133370029408 8.47755963030432 8.18865409267383 8.42828133282012 8.64550575294914 8.38200514606496 8.6917861280411 8.61917660491499 8.41717339460313 7.32948223847 0.130682149945656 0.135541067365572 0.133436670503615 0.129226169542170 0.131730954333924 0.134335492987998 0.134506884899201 0.135887102379436 0.12984562718585 0.133533136226001 0.124817002927713 0.122656726443733 0.130626799279099 0.131872688520079 0.127433602518975 0.131694325468935 0.129914443217316 0.124094933316381 0.133217630307426 5 5|0 -|/ 6710005 6710823 6710405.125 6709736 6711675 - gene protein_coding_gene TRUE TRUE AT5G19850.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G38520.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57930.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.395608298003007 4.10159810016177 0.00190157534532377 0.029882916401026 6.75345180523248 16.1066790900662 0.395608298003007 0.0892014002672777 AT5G09790_at 2.98124539368183 3.33110292446197 3.78631015533307 3.72911131684347 3.29868408035522 3.36532945300863 2.94145651110446 2.65459085921564 2.95478851454894 3.09785418275217 3.49600585623986 3.75572733659353 3.01144499628981 3.52395250310681 3.79461802678571 3.68799214792466 3.27159091213822 3.21164013230481 3.76314433821442 0.211939929561789 0.210435735601624 0.205833177714560 0.219677604472549 0.208836734045747 0.207584958941779 0.207310744270477 0.220524109809992 0.205833177714560 0.208002596310314 0.208416249319511 0.212163525811347 0.207322125526659 0.211379902677520 0.208045317127812 0.212402823626264 0.207005270510837 0.211718350957285 0.207398014756488 5 5 - 3039279 3040034 3039645.545 3038979 3041045 - gene protein_coding_gene TRUE TRUE AT5G09790.1|AT5G09790.2 ATXR5 (Trithorax- related protein 5); DNA binding|ATXR5 (Trithorax- related protein 5) Encodes a SET-domain protein. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. Identical to Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43) (Trithorax- related protein 5) (TRX-related protein 5) (Protein SET DOMAIN GROUP 15) (ATXR5) [Arabidopsis Thaliana] (GB:Q8VZJ1;GB:Q9FXW6;GB:Q9LXE2); similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to Os01g0965500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045494.1); similar to Nuclear protein SET; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE94382.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965)|similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to Os01g0965500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045494.1); similar to Nuclear protein SET; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE94382.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.38247615317677 4.10063134588659 0.00190462487557278 0.0299121112302428 6.75185101142625 6.63150408713126 0.38247615317677 0.0797565196088557 AT5G50240_at 5.6604382948995 5.29357321567329 6.87018965417924 6.23793720843368 6.18931635843616 6.48996099660736 6.86461787093687 6.73899902071512 5.63189233451787 5.9169527070278 5.34362582781286 5.87403203053892 6.15843292048283 6.59946084478999 6.18170841806449 6.91751688889599 6.61790152678111 6.73017333178815 5.41848149685992 0.23852119055394 0.238572552797560 0.231495357138545 0.254307915595223 0.259521074379071 0.23742384818459 0.257351776614916 0.235712881871111 0.246400224618132 0.237520980467396 0.238215332206666 0.231495357138545 0.233040640173854 0.241239268539507 0.238145041391282 0.231495357138545 0.252396447680090 0.231495357138545 0.232117879743772 5 5|0 +|/ 20468870 20469521 20469278.167 20468454 20469795 + gene protein_coding_gene TRUE TRUE AT5G50240.1|AT5G50240.2 PIMT2 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2); protein-L-isoaspartate (D-aspartate) O-methyltransferase|PIMT2 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2) L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced. similar to PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1), protein-L-isoaspartate (D-aspartate) O-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G48330.2); similar to Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) (GB:Q43209); similar to Os08g0557000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062480.1); similar to OSJNBb0011N17.10 [Oryza sativa (japonica cultivar-group)] (GB:CAD41093.2); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Protein-L-isoaspartate(D-aspartate) O-methyltransferase; (InterPro:IPR000682) 0.477262457350171 4.10057178105505 0.00190481293409499 0.0299121112302428 6.75175237789858 12.2724450707082 0.477262457350171 0.138497847157595 AT5G11930_at 1.69429710107716 2.11450204305297 2.38997425503032 3.13614399757446 2.42841995479324 2.68676021850369 2.21421081123397 2.31115844893448 1.66013992525191 1.65440162343336 2.08610572107617 1.93107459789987 2.55973745212085 2.11436965938229 1.35552800553978 2.59539185575740 2.74312143511300 1.75916949756417 1.78768949824069 0.195991319781016 0.187876396412711 0.191419206566963 0.19082956516126 0.191266574458721 0.195302837496965 0.187161926202212 0.187389515337452 0.198338802686609 0.193157778992969 0.192897274193276 0.194981869304594 0.194096624427532 0.195455866767981 0.190684536027774 0.187161926202212 0.190864357025784 0.188760481177866 0.187161926202212 5 5 - 3845173 3845566 3845348.727 3844941 3845646 - gene protein_coding_gene TRUE TRUE AT5G11930.1 glutaredoxin family protein Identical to Glutaredoxin-C10 (AtGrxC10) (GRXC10) [Arabidopsis Thaliana] (GB:Q29PZ1;GB:Q9LYI0); similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G33040.1); similar to Glutaredoxin [Medicago truncatula] (GB:ABE86256.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin-like, plant II; (InterPro:IPR011905) 0.509550550574409 4.09815723036152 0.00191245254191665 0.0300212060267248 6.74775377788933 4.29383633395771 0.509550550574409 0.155699197205252 AT5G63950_at 2.29419525705987 2.80418031547542 3.25888812051486 2.81903573414332 2.92701702710070 2.86137689359401 2.50995791608673 2.51833172197756 3.00826510656597 2.94885333250465 3.04928548654089 3.82364827267437 3.12714611899066 3.44985835272163 3.52214445947086 3.3174097401797 3.12167712068545 3.30982102458559 2.73574997057952 0.18795430660697 0.189850326020692 0.191947925990658 0.186929015057289 0.185771743199265 0.206183603900629 0.185097755633743 0.183900767405738 0.196376086768573 0.194507970049971 0.183832087535776 0.196051323977947 0.187938230439063 0.190444211585567 0.196356840902246 0.183595591290354 0.186018676964073 0.192598664598849 0.196482770896682 5 5|0 -|/ 25609527 25610310 25609986.333 25609182 25615731 - gene protein_coding_gene TRUE TRUE AT5G63950.1 CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase similar to CHR8 (chromatin remodeling 8), ATP binding / DNA binding / helicase [Arabidopsis thaliana] (TAIR:AT2G18760.1); similar to DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] (GB:CAL51622.1); similar to Os04g0692700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054371.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.438707079976381 4.09461258099103 0.00192372586169346 0.0301872423199171 6.74188248314101 5.86799618584299 0.438707079976381 0.117107464197674 AT5G42780_at 1.46278092114291 1.04801700911173 1.53386299640742 1.25297242686244 1.69424382014367 1.31873622687374 1.81570038539421 1.81864742130296 0.525083421985913 1.52375409031326 2.23109946548191 1.78273090592609 1.87301328454178 2.5762443571796 2.14897251891414 2.16543099990551 1.68873765699884 2.20516081645789 1.40300236789503 0.238157387518177 0.246040104943858 0.245779975684849 0.238976848862165 0.235886765559629 0.240622609925109 0.235886765559629 0.238617823329286 0.254625626672700 0.246022596704358 0.242882649421863 0.237406902400818 0.239219515544131 0.237611639979751 0.235886765559629 0.239323124798927 0.248910292664873 0.258359180052805 0.237189329995040 5 5 + 17172217 17172463 17172325.091 17172004 17172985 + gene protein_coding_gene TRUE TRUE AT5G42780.1 ATHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27); DNA binding / transcription factor similar to ATHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G18350.1); similar to ZF-HD homeobox protein-like [Solanum tuberosum] (GB:AAU89768.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) 0.423488945305759 4.08783684522495 0.00194546903937297 0.0305173927814203 6.73065530275132 3.11038867294178 0.423488945305759 0.108341514947592 AT5G50100_at 8.10892181573913 8.09057390787613 9.39372532431505 9.06293470799742 9.55402064305566 8.66430485200095 10.2733777736966 9.81383048488216 8.36321275426329 8.70761077429197 9.59121437694706 9.48610474818673 9.58166060415792 9.6104215925338 9.16127891186463 9.72347369969564 9.44642213385127 9.51266674274411 8.39308108681652 0.167195902664787 0.157853908890743 0.150754151580764 0.155771144089489 0.150836601801757 0.157172589534771 0.160724276482422 0.159641148656871 0.168905076453704 0.155556112516835 0.150754151580764 0.150754151580764 0.153675727313703 0.164157840266405 0.152014778223793 0.150754151580764 0.153042437006706 0.159929901331451 0.157456051733087 5 5|0 +|/ 20389189 20390231 20389597.778 20389079 20390667 + gene protein_coding_gene TRUE TRUE AT5G50100.1 similar to PBng143 [Vigna radiata] (GB:BAB82450.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Putative thiol-disulphide oxidoreductase DCC; (InterPro:IPR007263) 0.561628766208747 4.08626009381489 0.00195056555402554 0.0305862727701591 6.72804192932675 18.1212729668812 0.561628766208747 0.182532640034715 AT5G24870_at 5.6334755336549 5.75428958346192 7.9699303013636 7.79982614697259 7.84195895486023 7.29070603257514 7.0365621638369 6.99563929973642 6.00141282867031 6.67069487456337 5.12803837111814 4.26847030358046 6.30474249245201 5.86437618244094 4.25560261862652 6.77183837033746 7.56985777206847 6.06407300453040 6.29457026041642 0.190143010492548 0.187191202491776 0.196664303284472 0.186134457063788 0.189382037889983 0.189725270120931 0.188231405951924 0.183809079232166 0.187128539815893 0.182646843649872 0.195184313798214 0.197164768433048 0.183637764861741 0.182646843649872 0.197312444280081 0.185348298165888 0.182854956262940 0.18825023130623 0.190768488453303 5 5 - 8545023 8545901 8545315.636 8544788 8547792 - gene protein_coding_gene TRUE TRUE AT5G24870.1|AT5G24870.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G10650.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE80412.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.413381307640643 4.08364859233177 0.0019590374054677 0.0307080115309513 6.72371289981085 13.0905989406965 0.413381307640643 0.102246741437962 AT5G60040_at 2.34785831287308 2.44956523076468 3.03980241587911 3.0484067372554 2.47119740215051 2.94572970354302 2.67214670834666 2.315417950801 2.18153403636936 2.25619870329778 2.32238698887284 2.50994867956671 2.29089896469846 2.36617214080399 2.70726748557418 2.75455497294946 2.87232690596801 2.62921199889563 2.02482426619317 0.181623696286246 0.183824764338336 0.181106523991980 0.178918656373467 0.175986264581052 0.19079858905909 0.179125848091741 0.183168869160593 0.183931218436758 0.184018482732483 0.177497783491423 0.178006284739802 0.176557944189932 0.178292011793365 0.180313144204686 0.176787437808143 0.181330126543401 0.176028499007982 0.186157565755066 5 5|0 +|/ 24199104 24200471 24199984 24190629 24200867 + gene protein_coding_gene TRUE TRUE AT5G60040.1 NRPC1 (nuclear RNA polymerase C 1); DNA binding / DNA-directed RNA polymerase Encodes a subunit of RNA polymerase III (aka RNA polymerase C). similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT), DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT4G35800.1); similar to hypothetical protein CC1G_11381 [Coprinopsis cinerea okayama7#130] (GB:EAU80581.1); similar to RNA polymerase I, large subunit (ISS) [Ostreococcus tauri] (GB:CAL52497.1); similar to PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa isoform 2 [Bos taurus] (GB:XP_873057.1); contains InterPro domain RNA polymerase, alpha subunit; (InterPro:IPR000722); contains InterPro domain RNA polymerase Rpb1, domain 1; (InterPro:IPR007080); contains InterPro domain RNA polymerase Rpb1, domain 5; (InterPro:IPR007081); contains InterPro domain RNA polymerase Rpb1, domain 3; (InterPro:IPR007066); contains InterPro domain RNA polymerase Rpb1, domain 4; (InterPro:IPR007083); contains InterPro domain RNA polymerase I subunit A, N-terminal; (InterPro:IPR006592) 0.416223681278355 4.08080537557422 0.00196830470545387 0.0308421264888195 6.718998885524 5.01665640059481 0.416223681278355 0.10424365981308 AT5G18360_at 1.69968622954921 2.32741214500677 3.06227364608359 3.0051862314575 2.32316383847967 2.06242679584132 1.77962929612344 1.78096641055526 1.62135788884372 2.07632742425348 2.29075473849949 1.98772941105746 1.93246570764771 2.27652700150753 1.53082479571404 2.03714394584843 1.72636905376866 1.84157657687801 1.68435641037202 0.224304318963673 0.227102398832063 0.227256624255104 0.225500352853576 0.224423616440125 0.224304318963673 0.230156062485231 0.226091890218518 0.229724120022753 0.231563637595326 0.232227740555558 0.224304318963673 0.229854635516628 0.229186245112579 0.224926505926302 0.224870392168188 0.234038461578313 0.231396811631947 0.224817202325897 5 5 - 6080103 6080559 6080333.636 6080051 6083029 - gene protein_coding_gene TRUE TRUE AT5G18360.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18370.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G49140.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G17970.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.437624551849474 4.06978342850253 0.0020046654847256 0.0314005293582409 6.7007160524962 4.12856197998121 0.437624551849474 0.118043628255396 AT5G07860_at 6.57584401594881 6.8609223425495 6.5861141089899 6.39504201015192 6.29221656050431 6.60940687941569 6.03847677001106 5.51230954288981 5.40537518988418 5.49837810435756 6.17256172260204 6.45465222106137 5.71831094782551 6.10699958954029 6.3017272329801 6.56894252645836 6.40820462945618 6.32506574432207 5.87929620509633 0.204900789498048 0.203167978916140 0.203211783782683 0.209144416996679 0.201936333101094 0.205709470606208 0.205183781862547 0.204374702970726 0.213997653932884 0.209815732168997 0.212904196150659 0.202575858779347 0.20024140805166 0.204011354633023 0.219165731007866 0.198536711408750 0.206590661552582 0.203481753057767 0.208503657904419 5 5 + 2512411 2512894 2512598.727 2511443 2513096 + gene protein_coding_gene TRUE TRUE AT5G07860.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07870.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.443257482791855 4.06301339430957 0.00202734686353594 0.031744335914625 6.68947940235595 12.2844954837543 0.443257482791855 0.121784242472778 AT5G23120_at 10.6213598914907 10.867136917625 11.0385287620120 11.0312893804198 11.4407167136940 11.1810715937912 11.4602376588332 11.3533771613485 11.4231922104316 11.4526815896837 12.2091028190954 12.1547732295537 11.8080740477772 11.9949999939062 12.1203930463465 12.2065126265087 11.7080217346579 12.0061448293297 11.3354316507092 0.0838609063443278 0.0763572813703772 0.0788644066587928 0.083152184717263 0.0789578094875368 0.0805439460856836 0.0826797121574328 0.0786407004595966 0.0800888556416787 0.0763572813703772 0.0774159210712497 0.0763572813703772 0.0798304524000083 0.076930345144874 0.0785154392851834 0.0763572813703772 0.083883206753794 0.0776125810739627 0.0787055899030812 5 5|0 +|/ 7779196 7780442 7779787.4 7778124 7780631 + gene protein_coding_gene TRUE TRUE AT5G23120.1 HCF136 (High chlorophyll fluorescence 136) encodes a stability and/or assembly factor of photosystem II Identical to Photosystem II stability/assembly factor HCF136, chloroplast precursor (HCF136) [Arabidopsis Thaliana] (GB:O82660); similar to Photosystem II stability/assembly factor HCF136, chloroplast precursor (GB:Q5Z5A8); contains InterPro domain Glycosyl hydrolase, BNR repeat; (InterPro:IPR002860); contains InterPro domain Sialidase; (InterPro:IPR011040); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) 0.35980400622184 4.05529941211661 0.00205351791534801 0.0321425160476904 6.67666979845362 22.8391003971543 0.35980400622184 0.0645875406925865 AT5G45040_at 5.25645912485661 5.29295337993768 4.37423670475659 4.70279290290418 5.0921618585078 5.2860261976801 5.58591012160749 5.14945034220854 3.56461433028797 4.24133248510306 4.71241808646487 6.2579009779836 5.12529657173286 5.25789563028276 6.42126319544938 5.73451864243213 5.26721077451217 4.51668493135477 4.61033166729356 0.248458552244493 0.247329442718387 0.257655184646216 0.257466901715735 0.243070081932407 0.255236048723876 0.245594129877109 0.245686126947342 0.246902578859293 0.251635796382754 0.243344360136310 0.246486697822333 0.248717623694049 0.246410776307242 0.246050034646062 0.241266763232795 0.25349686401652 0.245032330173815 0.247030181138448 5 0|5 /|- 18192798 18193835 18193171 18192598 18194115 - gene protein_coding_gene TRUE TRUE AT5G45040.1 cytochrome c6 (ATC6) Identical to Cytochrome c6, chloroplast precursor (Soluble cytochrome f) (Cytochrome c553) (Cytochrome c-553) (Cytochrome c-552) (Atc6) (petJ) [Arabidopsis Thaliana] (GB:Q93VA3;GB:Q8SKV3;GB:Q9FL93); similar to electron transporter protein [Brassica rapa] (GB:ABK56012.1); contains InterPro domain Cytochrome c, monohaem; (InterPro:IPR009056); contains InterPro domain Cytochrome c, class I; (InterPro:IPR003088); contains InterPro domain Cytochrome c region; (InterPro:IPR012282) 0.40775014042898 4.05436522648968 0.00205671118369300 0.0321692715004206 6.67511806968325 9.86770287680976 0.40775014042898 0.100515048117475 AT5G57290_at 8.62369425522923 8.60863794116962 8.9342861492502 8.62686097777877 8.68073201758436 8.44010864442842 8.47062522430685 8.77586295191556 8.27739203746461 8.36531917185442 9.08300625462596 9.46470244485593 8.75819499061072 8.85620970602878 9.66715036382655 8.76702276290132 8.64152002875141 8.62103668647165 8.14019067121757 0.143650429006642 0.142447756717405 0.135241726138831 0.128899549379930 0.131509447707997 0.146497912685782 0.135210665336694 0.135330434899282 0.148067951377559 0.136602092661240 0.130660399714186 0.130644676268855 0.132694507349468 0.128600942802618 0.142806672301549 0.132643148739582 0.135808628159153 0.136696953784996 0.138210067393715 5 5 - 23224283 23225037 23224678.727 23224028 23225152 - gene protein_coding_gene TRUE TRUE AT5G57290.1 60S acidic ribosomal protein P3 (RPP3B) Identical to 60S acidic ribosomal protein P3-2 (RPP3B) [Arabidopsis Thaliana] (GB:Q9LVC9); similar to 60S acidic ribosomal protein P3 (RPP3A) [Arabidopsis thaliana] (TAIR:AT4G25890.1); similar to Os06g0701400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058484.1); similar to 60S acidic ribosomal protein P3 [Lactuca saligna] (GB:AAR22559.1); similar to 60S acidic ribosomal protein P3 [Lactuca saligna] (GB:AAR22560.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) 0.386089982675982 4.0522436237233 0.00206398261080011 0.0322713628765026 6.67159362288423 17.2667623693435 0.386089982675982 0.0857985767593287 AT5G06730_at 1.13711289020492 0.981748295386857 2.62400559495672 2.31307316866983 1.19823923747593 1.0577237923916 0.928121829514242 0.9551533121891 1.32802554355309 1.02089025819409 0.94227977996597 0.96511943056828 0.848316677788578 0.798745967273468 0.971987892315855 0.962207950766827 1.0389181415041 0.959257670172063 0.691821974152969 0.192025779034220 0.189817412902207 0.200744004872418 0.193812485389611 0.188979528600015 0.195002620319376 0.195387263155855 0.192878858074901 0.193838744309693 0.203943643604432 0.193069386113829 0.189261191795070 0.196138363712381 0.201811160997941 0.192501628215781 0.196142542317903 0.192662235198901 0.193636481666921 0.190571986972445 5 5|0 -|/ 2080381 2080868 2080576 2079956 2081685 - gene protein_coding_gene TRUE TRUE AT5G06730.1 peroxidase, putative Identical to Peroxidase 54 precursor (EC 1.11.1.7) (Atperox P54) (ATP29a) (PER54) [Arabidopsis Thaliana] (GB:Q9FG34;GB:P93729); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06720.1); similar to Peroxidase A2 (GB:P80679); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.360000648355376 4.05169593088765 0.00206586409153875 0.0322891366175855 6.67068370422691 2.37411398881254 0.360000648355376 0.0650493173810539 AT5G64520_at 2.73526884264147 3.10104573597975 3.42176229121511 3.4856953787546 3.15989606251584 3.34186865714312 3.00833640932254 2.57718924961981 2.26221094921187 2.47269939063988 2.34624137043177 3.17403261772572 2.62748034074841 2.25218787700376 2.85575008710243 2.84909879605327 2.79534056591852 2.43786785098839 2.28813271761081 0.254542354284498 0.25618497606009 0.254437475667538 0.251231083705159 0.250816212695341 0.277208940092899 0.267828109135012 0.250816212695341 0.27080422852431 0.258979514880311 0.250816212695341 0.266869019138372 0.260961128443274 0.253675058434322 0.257270866590064 0.250816212695341 0.250816212695341 0.269020742962595 0.256330914504863 5 5 + 25806656 25807398 25806948.375 25805260 25807590 + gene protein_coding_gene TRUE TRUE AT5G64520.1|AT5G64520.2|AT5G64520.3 XRCC2 (Arabidopsis thaliana homolog of XRCC2) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects. Identical to DNA-repair protein XRCC2 homolog (X-ray repair cross-complementing protein 2 homolog) (AtXRCC2) (XRCC2) [Arabidopsis Thaliana] (GB:Q682D3;GB:Q8GVF2;GB:Q9FLG6); similar to PREDICTED: similar to LOC553395 protein [Strongylocentrotus purpuratus] (GB:XP_791162.1); contains domain no description (G3D.3.40.50.300); contains domain X-RAY REPAIR CROSS COMPLEMENTING PROTEIN 2, XRCC2 (PTHR22942:SF5); contains domain RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER (PTHR22942)|similar to PREDICTED: similar to LOC553395 protein [Strongylocentrotus purpuratus] (GB:XP_791162.1); contains domain no description (G3D.3.40.50.300); contains domain X-RAY REPAIR CROSS COMPLEMENTING PROTEIN 2, XRCC2 (PTHR22942:SF5); contains domain RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER (PTHR22942) 0.411540561887643 4.04806782222866 0.00207837301069991 0.0324729429118531 6.6646552477754 5.60801497376606 0.411540561887643 0.103382177423935 AT5G64630_at 0.932565614363747 1.29496670117860 1.70419756896871 1.54669911864199 0.968031713863267 1.08549773815845 1.41560484210366 1.40844348185585 1.35145622532693 1.07376645137119 1.43991638114904 2.12864210950037 1.41016986961372 1.74532173894163 2.22624760802635 1.91249485004321 1.40376834602055 1.88426752360225 0.86982519062367 0.204282155694152 0.206861793686008 0.201807467837126 0.209453484584079 0.205618849244649 0.207726546310693 0.204709703406730 0.205979948793434 0.215749823753475 0.205745897295018 0.21068827032827 0.203125350919927 0.205631158709488 0.205231855361989 0.217154930208969 0.206063954306118 0.211364904027388 0.204252119102879 0.204744898669601 5 5|0 +|/ 25851997 25852983 25852554.111 25850400 25853610 + gene protein_coding_gene TRUE TRUE AT5G64630.1|AT5G64630.2|AT5G64630.3 FAS2 (FASCIATA 2); nucleotide binding Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. similar to HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA), nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT3G44530.1); similar to FAS2 [Glycine max] (GB:AAG30285.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain G-protein, beta subunit; (InterPro:IPR001632) 0.366857819643758 4.04644627480433 0.00208398930905546 0.0325489637981166 6.66196041862192 2.72810226862648 0.366857819643758 0.0713501381015167 AT5G26610_at 7.76364285997832 7.5343823044365 8.28851948017333 8.16468009969623 8.78208215963274 8.04629271390967 7.51508721511449 7.32202381324878 7.46062457876703 7.86289885062988 8.06863542580002 7.86749970291819 7.68966682190656 7.90295387540409 7.72305037363694 7.8720984002679 7.68447013628374 7.64331893691256 7.62786512388777 0.166426991833043 0.159689180660304 0.157970304622103 0.159536069881431 0.158696759316657 0.154625413386779 0.163422014759129 0.16699880689285 0.171755521062925 0.164237272125878 0.156376604316581 0.154625413386779 0.158439210052130 0.172697027635779 0.161181000462918 0.154625413386779 0.182628830631499 0.169018926288133 0.156528771397704 5 0|5 /|+ 9376307 9376951 9376649 9375186 9377128 + gene protein_coding_gene TRUE TRUE AT5G26610.1|AT5G26610.2 D111/G-patch domain-containing protein similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52350.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33215.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain D111/G-patch; (InterPro:IPR000467) 0.471304211602413 4.03917088678113 0.00210938374124135 0.0329337251574513 6.6498659798416 15.6555511108918 0.471304211602413 0.139151035212846 AT5G11230_at 2.32604879953261 2.62058091000844 2.73497968211929 2.71790588041238 2.95059533111628 2.88178339766078 3.20943389882954 3.43053733860523 2.34554685235380 2.86963854645432 3.78641298213183 4.22965629959458 3.28964123644546 3.16947732538022 3.49795992121722 3.92570371207029 3.36494078174294 3.16358472771572 3.06750194361050 0.222074884370892 0.221582154860176 0.228714661200328 0.222698102545185 0.221582154860176 0.227843713646286 0.221710041578355 0.231258886448447 0.24239209683508 0.227156149158167 0.221582154860176 0.221602084945449 0.227746344522064 0.230985678953034 0.229408470047779 0.221582154860176 0.238118641690100 0.229123590755643 0.223857197556758 5 5 + 3581042 3581543 3581262.909 3580563 3581618 + gene protein_coding_gene TRUE TRUE AT5G11230.1 phosphate translocator-related similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT5G25400.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE88491.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.358596089282154 4.03771223800491 0.00211451387247644 0.0330019376690034 6.64744045570139 6.01614210683231 0.358596089282154 0.0649041492565453 AT5G42270_at 11.3007197331677 11.4051327720363 11.8061657433246 11.8369302661416 11.6387557491260 11.5476194721349 11.9575277143218 12.0630438247141 11.5323427790322 12.0423282498742 12.5060813666761 12.4310891098061 12.2661849841991 12.4243526283886 12.3660596824005 12.5805337301704 12.2019143355218 12.4527477295697 11.7393825769606 0.0710331436864989 0.0669691661973607 0.0711369875306353 0.068481599625219 0.0671253844231903 0.0723790503029365 0.0681334247187344 0.0684694160464222 0.0755017727351125 0.0669691661973607 0.0683520168135298 0.0669691661973607 0.0700360682013016 0.0714550601256647 0.069395028194884 0.0685732212462067 0.073542281368295 0.0692344444080556 0.0674813600284224 5 0|5 /|+ 16921583 16922288 16921900.9 16919714 16922522 + gene protein_coding_gene TRUE TRUE AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Identical to Cell division protease ftsH homolog 2, chloroplast precursor (EC 3.4.24.-) (FTSH2) [Arabidopsis Thaliana] (GB:Q9FH02); similar to FTSH1 (FtsH protease 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT1G50250.1); similar to Cell division protease ftsH homolog, chloroplast precursor (GB:Q9BAE0); similar to Cell division protease ftsH homolog, chloroplast precursor (GB:Q39444); similar to Cell division protease ftsH homolog, chloroplast precursor (DS9) (GB:O82150); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.329015520253843 4.03488083038236 0.00212450928719424 0.0331460079000642 6.64273156462092 23.7819727332695 0.329015520253843 0.0306106303230681 AT5G46140_at 1.69705012276661 1.45416220239311 2.67465604415881 2.57789869218969 2.53315881555879 1.99322403161878 1.98020435415691 1.51767546677217 1.67100159862144 2.10918363162220 2.21654120123797 1.53142917425351 1.74603214016294 1.77680302616730 1.92110587631635 2.17659047762901 2.24125836809284 2.41461416436360 1.84617943046901 0.205784411627127 0.207108833786483 0.206550956030827 0.207464005464733 0.20222900146381 0.205662916476705 0.20222900146381 0.208880336974804 0.214721011703148 0.208725016984266 0.209796261746658 0.205364904453349 0.211327108523073 0.211728121095758 0.208610617514541 0.20222900146381 0.209216990385813 0.213702268270148 0.208757658907493 5 5 - 18722381 18722963 18722651.091 18722241 18723935 - gene protein_coding_gene TRUE TRUE AT5G46140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46130.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) 0.455026637991519 4.02323812457882 0.00216613174635022 0.0337832334120663 6.62335947585687 3.99275456141794 0.455026637991519 0.131090372179043 AT5G41170_at 3.01195584491443 2.89017197325746 3.60130370654408 3.56606408838634 3.17254294922841 3.51635087086787 2.77259833387042 3.15703324100973 3.10294104439068 3.14356546000127 3.32028657981356 3.47242510060173 3.36879929486031 3.08583273882316 2.96396380798468 3.4051482107493 3.34813292130251 3.58079564461313 2.87838381123717 0.185372302187186 0.181916731302256 0.183568964762044 0.184397226529509 0.190498775219398 0.18406257685753 0.190501706866242 0.180440804812615 0.195928231641655 0.179478332756588 0.182819879990437 0.182463317944622 0.180907760047362 0.189519027065542 0.179478332756588 0.179478332756588 0.189795322755703 0.18120393970485 0.186030521091762 5 5 - 16496203 16496635 16496463.455 16495714 16497812 - gene protein_coding_gene TRUE TRUE AT5G41170.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G16710.1); similar to fertility restorer homologue C [Raphanus sativus] (GB:CAD80164.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.391334243813754 4.01745001489993 0.00218714013590143 0.0340986169197726 6.61372326216324 6.39090419728647 0.391334243813754 0.0919093347021244 AT5G46290_at 8.61515270547584 8.73216647962425 8.6099505677913 8.60072536967296 8.73807308880161 8.5130853910238 9.34410613948664 9.42461101062042 8.36509131527739 8.71995679170225 9.8080771382515 10.0932728841974 9.4571650300286 9.49175382951204 10.2747498762592 9.56051466316212 8.86460624887427 9.5535784901694 8.56279727582496 0.122195687028545 0.118332218126205 0.131454501945366 0.124609940480772 0.125626426933541 0.136206014843150 0.124815660498933 0.120967516857679 0.136734539859602 0.121396785024661 0.123259519632917 0.122790888087282 0.120459889341541 0.124044044008155 0.122363426721093 0.122197495530511 0.134621554812972 0.128184951467332 0.119371796657294 5 5|0 -|/ 18791687 18792497 18792087.7 18791313 18793962 - gene protein_coding_gene TRUE TRUE AT5G46290.1|AT5G46290.2 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA, Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to 3-ketoacyl-acyl carrier protein synthase I (GB:AAC49118.1); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to beta-ketoacyl-ACP synthase (GB:AAA33873.1); contains InterPro domain Beta-ketoacyl synthase; (InterPro:IPR000794)|Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to 3-ketoacyl-acyl carrier protein synthase I (GB:AAC49118.1); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to beta-ketoacyl-ACP synthetase I [Glycine max] (GB:AAF61730.1); contains InterPro domain Beta-ketoacyl synthase; (InterPro:IPR000794) 0.337566248154617 4.00689455549558 0.00222600143330864 0.0346920094775415 6.59614091228728 17.9158571262246 0.337566248154617 0.0460721524134929 AT5G08360_at 2.37640168045894 2.14245978274506 2.24427416562047 3.11743015750717 2.03242515885852 2.22882353960348 1.99930742449040 2.12092800390523 2.22095438698956 2.27127409295647 3.0970072633882 3.49341460637691 2.27794959947968 3.37221673223326 3.25700283587419 3.01422112325626 2.92885283939242 2.46180435172829 2.15653301123863 0.242011576527666 0.245093570678871 0.247763403641479 0.251911548832299 0.246419467262071 0.242011576527666 0.246154730836357 0.250449760120568 0.244947499278695 0.246060349946371 0.243058767812887 0.249087383423772 0.248404968501063 0.248599644794356 0.242659865424060 0.242020088539575 0.242011576527666 0.256355072153811 0.258261101564278 5 5|0 +|/ 2689923 2690702 2690346.222 2689714 2690975 + gene protein_coding_gene TRUE TRUE AT5G08360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23380.1); similar to Protein of unknown function DUF789 [Medicago truncatula] (GB:ABE84405.1); similar to Os10g0494000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064942.1); similar to Protein of unknown function DUF789 [Medicago truncatula] (GB:ABE84958.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) 0.508759435534383 4.00333226999706 0.00223927854231561 0.0348863918519453 6.59020447003918 4.88478748882918 0.508759435534383 0.161460473105356 AT5G45950_at 8.85496931690301 9.36275127252472 9.32961440616358 9.48811149920014 10.2245200083531 9.99290110164595 10.9648366274210 10.8816507061864 9.96928471992003 10.5945277909184 11.8579329790992 11.9435418060067 11.5387265981186 11.4610855768336 11.5636620859584 10.9979354356724 10.5964308991705 11.4498363941617 10.5194215331382 0.108976713544128 0.0976468974771566 0.105475801232814 0.100706939185458 0.0971554894208493 0.0975179026950594 0.0997583437962125 0.0998479381964435 0.101770932855716 0.0978377106590047 0.0989361557148389 0.0985417835064523 0.102337850113747 0.0994903348863748 0.0971554894208493 0.0971554894208493 0.101810821552410 0.0973067218130636 0.097705916395067 5 0|5 /|+ 18653233 18653698 18653431.333 18651306 18653926 + gene protein_coding_gene TRUE TRUE AT5G45950.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G45960.1); similar to Os09g0247600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062663.1); similar to Os02g0110000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045647.1); similar to Lipolytic enzyme, G-D-S-L [Medicago truncatula] (GB:ABE90349.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.403900365150338 4.00229013785429 0.00224317831265783 0.0349345946887204 6.58846753107191 20.781030360568 0.403900365150338 0.101429973425677 AT5G63780_at 10.4297628245186 10.3900489681660 11.0341998369971 11.0471535462051 10.6310685911058 10.5567769559132 11.1403200132327 11.2298712782393 10.3427769325964 10.6401338675680 10.8091768276768 10.4772812988642 11.253875841594 11.1913287048395 10.5436640677446 11.4220699858616 11.4399836830537 11.1971861303888 10.2724961961510 0.0811788625087364 0.0806129815473406 0.0818851600240893 0.0778434896220206 0.0773937513490767 0.0813573914866817 0.0834495119246514 0.0773937513490767 0.088582708414137 0.0817308421494642 0.0773937513490767 0.0773937513490767 0.0773937513490767 0.080052775651179 0.080355598443796 0.0773937513490767 0.0924578826384667 0.0773937513490767 0.0779562502404564 5 5 + 25542988 25543394 25543170 25541071 25543819 + gene protein_coding_gene TRUE TRUE AT5G63780.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G08750.2); similar to zinc finger protein [Brassica rapa] (GB:ABK56014.1); similar to OSJNBb0020J19.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE05784.2); similar to Os04g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054367.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.321575390123618 3.99849533686284 0.00225743886321076 0.0351440606945254 6.58214169236476 21.5375451599346 0.321575390123618 0.0213942498945863 AT5G14770_at 1.87313855302207 1.78152140072083 2.89917857993398 2.47755295278435 2.60953161273545 2.48048803376546 2.18511877646868 2.11311357022496 1.88520653752907 2.00586887338021 2.10662258894185 1.78570204043037 2.01494839474626 1.83517777038947 2.44190417969521 2.54115524589974 2.46181942748235 2.17359082404465 2.27489262071071 0.204543834790913 0.194235038964425 0.19438912375138 0.197648379791157 0.199828209109397 0.202953321944869 0.194296856674664 0.194558458693837 0.204786682777631 0.195760778587822 0.196244249908860 0.197775548134756 0.199599559347434 0.199409255155832 0.201872815852075 0.199982685074454 0.195690527374414 0.196893699581477 0.202451242844479 5 5 - 4772884 4773450 4773196.636 4772884 4775700 - gene protein_coding_gene TRUE TRUE AT5G14770.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22929.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.371628550721374 3.99580495717908 0.00226760637770158 0.0352811445521914 6.57765596583514 4.41517430303717 0.371628550721374 0.0789248550053443 AT5G34930_at 4.59185405532603 5.31636779527397 5.27011539366954 5.66305238058666 5.15747842725315 5.54827209647885 3.85069037848650 5.07486138380393 4.94767391364629 4.88364597443276 5.73218197513764 5.69996135044399 5.55948446201058 5.2436848406322 5.5257892541777 5.6473632299722 5.64080276683047 5.96790965586459 4.81988822756442 0.232316373560375 0.227672669780501 0.236222874536961 0.244041236690057 0.235186269069364 0.239394311761221 0.230772945866626 0.228849824502077 0.236381861621066 0.238029824868692 0.235968488775043 0.231292214889721 0.230501771318670 0.234164828774693 0.237571736707975 0.232435410222219 0.234685550889876 0.232063717094686 0.231572384661443 5 5 + 13252215 13252675 13252410.727 13250604 13252797 + gene protein_coding_gene TRUE TRUE AT5G34930.1 arogenate dehydrogenase Identical to Arogenate dehydrogenase 1, chloroplast precursor (EC 1.3.1.78) (TyrAAT1) (TYRATC) (TYRAAT1) [Arabidopsis Thaliana] (GB:Q944B6;GB:O82603); similar to prephenate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G15710.1); similar to Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent [Medicago truncatula] (GB:ABE87267.1); contains InterPro domain NADP oxidoreductase, coenzyme F420-dependent; (InterPro:IPR004455) 0.722348662305147 3.99573490589731 0.00226787175374911 0.0352811445521914 6.57753915756452 10.3145281040756 0.722348662305147 0.264192414975362 AT5G05130_at 1.85193758046146 1.47700064094713 1.81140847013912 2.46909923264898 2.08082013122401 2.42300668815273 1.5127193543337 1.58537141228281 1.34171726025275 1.91607959058741 1.94603470130607 1.87175351233279 2.05580922468957 2.03552985021824 2.06747330033657 1.69426554436792 2.0801775154468 1.95260478499217 1.54912187907399 0.202311825496846 0.204159341117899 0.201944176549088 0.202415778614075 0.203773601427949 0.199139114846060 0.199554040754435 0.202641226565025 0.219475490899709 0.201687087254286 0.201948626051671 0.202140277987588 0.208176971180241 0.204440391950988 0.207454613731514 0.199792868411469 0.202555725662303 0.198728682526723 0.200673424212786 5 5 + 1514338 1514795 1514511.545 1512121 1515080 + gene protein_coding_gene TRUE TRUE AT5G05130.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein Identical to Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) [Arabidopsis Thaliana] (GB:Q9FF61;GB:Q8RWB4;GB:Q8RWC7); similar to RAD5, ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22750.1); similar to Os07g0642400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060436.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG13358.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.474988097220741 3.99034271832971 0.00228839660113773 0.0355876791984114 6.56854629193436 3.68405158753173 0.474988097220741 0.14432227846145 AT5G67440_at 5.17191925408206 5.5743046260035 5.60818791616317 6.12499333232062 7.10396088712884 6.36562981591864 6.24938974536558 5.74585091715582 5.36329208568331 5.170068840789 6.15364033356725 6.04575688720606 6.13785715431881 5.93096185810474 5.02749042187833 6.75013813779738 6.32241082635125 4.9485319777692 5.65429950554847 0.271912289406377 0.268071221831557 0.27367938931385 0.268071221831557 0.283346279632762 0.299839642279971 0.268071221831557 0.275752208787244 0.294388809975336 0.268407683151425 0.274987417182926 0.268071221831557 0.268071221831557 0.279064696069468 0.274555225094038 0.268071221831557 0.28283489715403 0.294414618078695 0.277098577397927 5 5 - 26930179 26930741 26930466.091 26929933 26933306 - gene protein_coding_gene TRUE TRUE AT5G67440.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT4G37590.1); similar to Os12g0583500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067147.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94544.1); similar to Os03g0609800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050649.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.56701924559081 3.99009603865813 0.00228934018714344 0.0355895879685527 6.56813481603475 11.6482721919161 0.56701924559081 0.191746281480513 AT5G03300_at 9.54432437537463 9.64688166262649 9.89443604289215 9.80954754888377 9.46998239618374 9.65047678788661 9.85341184671974 9.96346723475663 9.49434890813073 9.6176114899174 10.3980957352236 10.6440241796963 10.0038170856542 10.1826154697093 10.6545090313061 9.98263707181757 9.90823441513843 10.1800093068681 9.48051550435877 0.100715037930152 0.100715037930152 0.108755115206073 0.100715037930152 0.107983848026834 0.109975536330962 0.107115786538219 0.100715037930152 0.119207886361397 0.107065507855602 0.102983917121733 0.103324415524691 0.101419079282559 0.107603435816833 0.104804471999304 0.108706228847170 0.109796762999213 0.109991226537552 0.104467174745361 5 5|0 +|/ 797921 798970 798457.9 796441 799175 + gene protein_coding_gene TRUE TRUE AT5G03300.1 ADK2 (ADENOSINE KINASE 2); kinase Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion. Identical to Adenosine kinase 2 (EC 2.7.1.20) (AK 2) (Adenosine 5'- phosphotransferase 2) (ADK2) [Arabidopsis Thaliana] (GB:Q9LZG0); similar to ADK1 (ADENOSINE KINASE 1) [Arabidopsis thaliana] (TAIR:AT3G09820.1); similar to adenosine kinase isoform 2S [Nicotiana tabacum] (GB:AAU14833.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Adenosine kinase; (InterPro:IPR001805); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173) 0.333753450108306 3.98865250327913 0.00229487006624398 0.0356627673373786 6.56572678660933 19.6166000307800 0.333753450108306 0.0432340522060455 AT5G65810_at 6.94620939870096 6.94663045236596 6.53942876507708 6.4897214964105 7.57666405833153 7.2792426784578 7.83908865401649 7.11331402469748 7.27515407205757 7.28647104761829 8.82484647924265 8.8726671818339 8.23073501435667 8.48488605548356 8.79820264837223 8.12035683003769 7.89365836435208 8.42051262668203 7.33234871896775 0.178658435769204 0.172786317143034 0.18473272403789 0.186075426347251 0.172786317143034 0.185110963543190 0.180713946692104 0.175507425003432 0.183620128511089 0.189339353933203 0.176617038026571 0.185906943160054 0.186183883698221 0.192847677197097 0.181017052844082 0.177714174415091 0.179590611868743 0.187374399656603 0.183686003388205 5 5 - 26355074 26355770 26355492.455 26354895 26356965 - gene protein_coding_gene TRUE TRUE AT5G65810.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49720.2); similar to Os01g0144000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042001.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78370.1); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) 0.458847743810619 3.9804978069212 0.00232637178913801 0.036139357614683 6.55211941612225 14.9681496558037 0.458847743810619 0.136008115907086 AT5G43750_at 10.5106935660177 10.6223148110816 10.6054014413893 10.7638916214754 11.0642243339267 10.5909622572531 11.1969346675956 11.2415479476786 11.1679350118447 11.3093776078786 12.1209866857183 12.28809713024 11.8129748871214 12.1464602858064 12.1751456539098 12.1226569684976 11.5096215743326 12.1039322612145 10.9170639010676 0.0957451858100373 0.0888237067125652 0.0992390209449798 0.0859790498856826 0.0895299151640033 0.098360871096785 0.0953934935382647 0.0881306116749147 0.102280508708110 0.0896814293770949 0.0859790498856826 0.0870154109298213 0.0859790498856826 0.0877312479573337 0.0934291023078305 0.0859790498856826 0.0966552413609363 0.092662260744403 0.0892870191413068 5 5|0 -|/ 17597458 17598307 17597834.8 17597193 17598449 - gene protein_coding_gene TRUE TRUE AT5G43750.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD88171.1) 0.383386378004583 3.98008193950238 0.00232799033085134 0.0361450022843523 6.55142528917533 22.4077179663616 0.383386378004583 0.0888405705898884 AT5G13730_at 8.94814166282739 8.87831449402219 8.84431445623869 8.72540224416751 9.93367410126111 9.41767468141902 9.02253389601635 8.8664505580502 8.74865880078018 9.56477862011679 9.60075175530296 9.69984050059022 9.85367404154369 9.70396866532144 9.84566721061897 10.0782014716536 9.71051781429414 9.1116718738787 9.32834216646019 0.111880481114757 0.107903242753747 0.111165821936884 0.114502016105578 0.112363310099111 0.111110838239321 0.107903242753747 0.113023112448486 0.123245694936654 0.107903242753747 0.109491562661476 0.107903242753747 0.109039497156446 0.111667301869291 0.109684558474682 0.109936983091159 0.120603482078672 0.126387885661047 0.111560714744174 5 5|0 -|/ 4429262 4429956 4429520.7 4429113 4430840 - gene protein_coding_gene TRUE TRUE AT5G13730.1 SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity. similar to SIGB (SIGMA FACTOR B), DNA binding / DNA-directed RNA polymerase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G08540.1); similar to PpSIG2 [Physcomitrella patens] (GB:BAB21618.1); contains InterPro domain Sigma-70 region 4; (InterPro:IPR007630); contains InterPro domain Sigma-70 region 3; (InterPro:IPR007624); contains InterPro domain Sigma-70 factor; (InterPro:IPR000943); contains InterPro domain Sigma-70 region 2; (InterPro:IPR007627); contains InterPro domain Sigma factor, region 2; (InterPro:IPR013325); contains InterPro domain Sigma factor, regions 3 and 4; (InterPro:IPR013324) 0.394008177786987 3.97997609484209 0.00232840246212723 0.0361450022843523 6.55124862027619 18.5367948596351 0.394008177786987 0.0962957630592817 AT5G18570_at 6.0378105613036 6.37412923674029 6.09988568379616 6.70541839798206 6.93490713539396 6.45740026061889 6.47928386506797 6.4583345020321 5.64488706204694 6.2318705065471 6.37739571915475 6.83634823534303 6.6394260615676 6.7019960281463 7.59260033997689 7.06329932711785 6.85006002469608 6.3074203891431 6.2944773765707 0.243662188415002 0.236098964216246 0.252312934345212 0.236098964216246 0.251087221300194 0.244806762759207 0.241391414991423 0.238407119822548 0.248030172494735 0.238854889647015 0.240790120006912 0.241572184165308 0.241754355444336 0.247609387626444 0.245853537537914 0.243708259335607 0.245651218969329 0.241660822809672 0.236098964216246 5 5 - 6171737 6172639 6172279.778 6171663 6174835 - gene protein_coding_gene TRUE TRUE AT5G18570.1 GTP1/OBG family protein similar to GTP binding [Arabidopsis thaliana] (TAIR:AT1G07615.1); similar to putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83597.1); similar to Os07g0669200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060586.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain GTP1/OBG subdomain; (InterPro:IPR006169) 0.475501639375036 3.97449932869449 0.00234983173451488 0.0364646043114771 6.54210555868107 12.8699694957159 0.475501639375036 0.145636764748826 AT5G48720_at 2.88099865475651 3.49501613521311 3.96642532031638 4.04913035596583 3.97894114719263 3.41776364743648 3.25350483994602 2.97028363372508 3.08523301192434 2.64948893159174 3.03415595966845 3.17323702414551 3.19012518661017 2.96554801311731 3.14720898484636 3.03376819716832 3.55971263774446 3.70961677998951 3.12350794018071 0.200511563094825 0.203537634939906 0.202566266027999 0.200951216926278 0.201117862247718 0.1992090333099 0.200122167929284 0.205351247582771 0.201830631086277 0.202311796885533 0.200189893051110 0.198323770311248 0.199456929047739 0.198379293450135 0.206960295149933 0.203599831627092 0.197871938876730 0.202197047694080 0.197871938876730 5 5 + 19777958 19778752 19778429.545 19776835 19778947 + gene protein_coding_gene TRUE TRUE AT5G48720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01990.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16868.1); similar to Os09g0401900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063123.1); similar to Os01g0918100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045205.1) 0.488521302581657 3.97363630376646 0.00235322726024493 0.0365042307354208 6.54066451455551 6.59121541305743 0.488521302581657 0.152738954795440 AT5G06590_at 2.57883111851507 2.77256272375104 3.2349921081521 3.22631832155725 2.55709372887061 2.65131254321552 3.24642832822363 2.65262344799245 2.73266440161250 2.88094574866806 3.11888911619362 4.16407942496424 3.66725579048476 3.2190719602827 3.7829646207857 3.31496176446457 2.68964457630344 3.30829002607986 2.44666991521667 0.291665867608925 0.301902509683874 0.297006708648816 0.301417133332925 0.282327194696927 0.303794151297959 0.297003681764061 0.285270964521545 0.311639935199313 0.309476849385187 0.282327194696927 0.282327194696927 0.292669102964017 0.290364106513234 0.282327194696927 0.283937413815649 0.309652591180747 0.282327194696927 0.325689565036376 5 5|0 +|/ 2017540 2018661 2018244.4 2016646 2018836 + gene protein_coding_gene TRUE TRUE AT5G06590.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99420.1) 0.413101204470387 3.97262262649046 0.00235722205580094 0.0365531216099158 6.53897181764215 5.91247263092334 0.413101204470387 0.109324616816391 AT5G59780_at 10.9679620656622 10.7234722160348 12.1766055420267 11.8844771089860 12.2236672362673 11.9352983572058 11.5256154143425 11.0660453279849 10.6216461626075 11.0147449216237 10.4427542882673 9.6149130314081 10.9315880791487 10.9831735966167 9.07235278088942 11.2894852607143 11.7500893530539 10.7947543101210 10.6191993287403 0.101810562810884 0.101316408006519 0.104161275924625 0.099448510959907 0.106037053136051 0.105347513821469 0.100283522123844 0.105214071564397 0.116064977589813 0.101599048823788 0.103801041556991 0.102784756018108 0.102655398489170 0.102070775902563 0.117222529158314 0.100631471704728 0.105433566299776 0.105381186384785 0.101845575181448 5 5 - 24099651 24100288 24099911.545 24099423 24100657 - gene protein_coding_gene TRUE TRUE AT5G59780.1|AT5G59780.2|AT5G59780.3 MYB59 (myb domain protein 59); DNA binding / transcription factor Encodes a putative transcription factor (MYB59). Identical to Transcription factor MYB59 (Myb-related protein 59) (AtMYB59) (MYB59) [Arabidopsis Thaliana] (GB:Q4JL84;GB:O50069;GB:Q4JL85;GB:Q4JL86;GB:Q7DLH5;GB:Q9FN86); similar to MYB111 (myb domain protein 111) [Arabidopsis thaliana] (TAIR:AT3G46130.3); similar to MYB transcription factor MYB139 [Glycine max] (GB:ABH02860.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|Identical to Transcription factor MYB59 (Myb-related protein 59) (AtMYB59) (MYB59) [Arabidopsis Thaliana] (GB:Q4JL84;GB:O50069;GB:Q4JL85;GB:Q4JL86;GB:Q7DLH5;GB:Q9FN86); similar to MYB111 (myb domain protein 111), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G46130.1); similar to MYB transcription factor MYB139 [Glycine max] (GB:ABH02860.1); similar to Os11g0700500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068517.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.421131835826164 3.96684861462666 0.00238011210423874 0.0368948788824824 6.52932799111064 22.2437690628227 0.421131835826164 0.114723049672525 AT5G55040_at 1.64248210708316 1.73870931734191 2.60585600975392 2.57459713793344 2.65638497235357 1.81708216195172 1.59189493385197 1.72996930191747 1.81310101323796 1.08500142209571 1.34227978061727 1.60339909064785 1.86126223832391 1.98110372022698 1.98829057592004 1.74611991345683 2.04616174316407 1.84718903110023 1.85309100528965 0.231311483819512 0.233363573464863 0.24038842923648 0.227628227620609 0.236908363282858 0.231005730799933 0.233112780469431 0.226977574468904 0.235636621440732 0.234373365192883 0.230784943102881 0.226977574468904 0.228786147820895 0.234897583852067 0.232482075718768 0.226977574468904 0.238095630157333 0.234716485104043 0.240626823771099 5 5|0 -|/ 22347162 22347960 22347712.2 22347146 22347986 - gene protein_coding_gene TRUE TRUE AT5G55040.1 DNA-binding bromodomain-containing protein similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT1G20670.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM22713.1); similar to Os03g0130800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048857.1); similar to Os09g0550000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063862.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.477980385128621 3.95552758084022 0.00242566762385562 0.0375876110153874 6.51040939429435 3.73747544705169 0.477980385128621 0.148235288713394 AT5G45830_at 2.18670529838751 2.30992995213108 2.57991185437785 2.43393397009117 3.75491974366150 3.64366297179521 3.78693451254069 3.19190992449293 2.29654088233059 3.18276544978391 3.93947778258099 3.18783476950341 3.79126517058214 3.88034739470916 2.91549352071970 2.64453609314581 3.03433593414535 3.0170762687398 2.65501953324772 0.216508325161311 0.214448908162318 0.216371232067712 0.214448908162318 0.229185332579858 0.215500660120073 0.223479595455792 0.215715836292644 0.221049857373202 0.215471482652272 0.217400775932335 0.214448908162318 0.228348087502889 0.217811298415518 0.218911999927880 0.214448908162318 0.228158922338646 0.214448908162318 0.215583271342887 5 5 - 18607480 18608310 18607849.545 18606709 18608627 - gene protein_coding_gene TRUE TRUE AT5G45830.1 DOG1 (DELAY OF GERMINATION 1) Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18660.1); similar to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] (GB:BAA05470.1) 0.412045562369217 3.95453431598637 0.00242970763573299 0.0376367628401502 6.50874891472627 5.99235743937801 0.412045562369217 0.109848986753706 AT5G01090_at 8.33784615710634 8.5776611956518 8.27812354846885 8.53250898027822 9.23178686899213 9.02109118920579 9.25323116455069 8.91537408414482 8.84081690529791 8.77846756878415 10.0015794486443 10.0808318926781 9.79689383076478 9.52808291266097 9.64611671865426 9.59522889594674 9.35711792062507 9.33583986102331 9.05923803129886 0.138887625856640 0.135178425616985 0.141744832839322 0.140766669677354 0.139046465669920 0.141842400145277 0.145215463084148 0.158454795801721 0.164683890044296 0.135178425616985 0.138516960078667 0.138903202337922 0.135178425616985 0.143006314807929 0.140256388875605 0.138655253997087 0.141923563627729 0.153631879867647 0.138135549607145 5 5 + 33523 34031 33784.727 32831 34325 + gene protein_coding_gene TRUE TRUE AT5G01090.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G09035.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE83853.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220) 0.384860048185280 3.95406290468704 0.00243162751116435 0.037653049855809 6.50796080246118 18.0487290336757 0.384860048185280 0.0916966478088164 AT5G60200_at 1.99009447464971 2.36128811189509 2.38452562878578 2.57044180785840 2.95741293160463 2.71816401290283 3.23995942635647 3.04023901293928 2.77701229558469 3.07378675285174 3.70072280113547 3.71296141294609 3.53763450254329 3.82620138137596 4.34093509059115 3.36839010588986 3.2766735967451 4.19263231066132 3.08877974470693 0.211506721464909 0.207335656310346 0.207966049979875 0.213710914377539 0.212330804173259 0.204573760558505 0.203647919241352 0.206321869968552 0.212689082326845 0.206845969706676 0.210005256031912 0.20888800522506 0.212555564373571 0.208096113696844 0.216424799668759 0.203647919241352 0.211466720370603 0.205858218243414 0.20535133623067 5 5 + 24258640 24259001 24258808 24258201 24259749 + gene protein_coding_gene TRUE TRUE AT5G60200.1 Dof-type zinc finger domain-containing protein Identical to Dof zinc finger protein DOF5.3 (AtDOF5.3) (DOF5.3) [Arabidopsis Thaliana] (GB:Q84TE9;GB:Q8LDE1;GB:Q9LSS6); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G45610.1); similar to elicitor-responsive Dof protein ERDP [Pisum sativum] (GB:BAA85655.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) 0.382200070674675 3.95348446724408 0.00243398542360247 0.0376761056970099 6.50699373101881 6.01995492484927 0.382200070674675 0.0898348463268039 AT5G04660_at 3.07911808902531 3.31602300191136 3.39755906936215 3.60927047425761 3.00173063464408 3.83478431371097 3.69527052359567 4.15866034823368 3.57789468503859 4.00372154922958 4.79904808222455 6.02666000353924 4.5730362498255 4.65070761812957 5.34923713879686 5.46486520991354 4.44426110925647 4.89159588258478 4.0310588117104 0.185151420020391 0.198434356085156 0.19453734389845 0.188084853566973 0.192289379957245 0.188344196288228 0.185151420020391 0.190752950201136 0.192829860473328 0.19007143459839 0.194389121439995 0.195227758359495 0.185346127691656 0.190353678403656 0.190181174457632 0.193713332220166 0.197125970096098 0.188703361126658 0.192653604693304 5 5 + 1337017 1337474 1337291.818 1335996 1337671 + gene protein_coding_gene TRUE TRUE AT5G04660.1 CYP77A4 (cytochrome P450, family 77, subfamily A, polypeptide 4); oxygen binding encodes a protein with cytochrome P450 domain similar to CYP77A7 (cytochrome P450, family 77, subfamily A, polypeptide 7, unfertilized embryo sac 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10560.1); similar to CYP77A6 (cytochrome P450, family 77, subfamily A, polypeptide 6), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10570.1); similar to CYP77A9 (cytochrome P450, family 77, subfamily A, polypeptide 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G04630.1); similar to Cytochrome P450 77A3 (GB:O48928); similar to Cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) (GB:P37124); similar to Cytochrome P450 77A1 (CYPLXXVIIA1) (P-450EG6) (GB:P37123); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.526301431046576 3.95303844139933 0.00243580520776072 0.0376908182682071 6.50624801082714 7.95946110373094 0.526301431046576 0.173888011080997 AT5G15760_at 1.8959135246078 2.48289084716726 2.21611833756641 2.40067554618394 3.11287331373194 2.51491544189566 2.46156919533764 3.08184415791418 2.43366298097620 2.19972094250014 3.05521513318553 3.28784068814736 3.51677285766584 3.56952510904983 3.43502292419576 3.02957061708222 2.51315772195124 2.97257711826095 1.85863826018892 0.261177305234917 0.258313438808503 0.270152529673947 0.268052921896566 0.267593970079362 0.27515071003967 0.260324731451646 0.258264077012881 0.265538119847230 0.263012453050831 0.257776503746925 0.258122310403865 0.259792751475594 0.260679168214319 0.266293475356396 0.258877929391479 0.273307204957157 0.259413783999893 0.268653647388078 5 5|0 +|/ 5143134 5143841 5143395.8 5143056 5144056 + gene protein_coding_gene TRUE TRUE AT5G15760.1 plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative Identical to Plastid-specific 30S ribosomal protein 3-2, chloroplast precursor (PSRP-3 2) [Arabidopsis Thaliana] (GB:Q9LFV0); similar to plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative [Arabidopsis thaliana] (TAIR:AT1G68590.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96848.1); contains InterPro domain Plastid and cyanobacterial ribosomal protein PSRP-3/Ycf65; (InterPro:IPR006924) 0.544522052612514 3.95190678823904 0.00244042871671978 0.0377488887444661 6.50435588362206 5.18908387842432 0.544522052612514 0.183217279370653 AT5G24120_at 8.0266492327939 8.59264564472712 9.90204983180405 10.3455592313871 9.97637370135324 9.76744763951486 10.8153403930183 10.8174778648988 9.47233567832843 9.9243409422748 10.2015280682767 9.8401405706718 10.4979711058082 10.3752986740209 9.03740194285247 10.7483828984311 10.6691325984640 10.2057860488659 9.83362660039291 0.151979158569287 0.144985119333612 0.145831989820428 0.143936014729301 0.13875598580924 0.143456723879367 0.145201015691962 0.149077204431822 0.145815050350981 0.144823451738553 0.138339267838829 0.145329012356499 0.139974536923496 0.147118908679870 0.152009497506645 0.142283017133421 0.143678136356803 0.137834738876476 0.146217558079987 5 5|0 -|/ 8157797 8158537 8158219.6 8157554 8160232 - gene protein_coding_gene TRUE TRUE AT5G24120.1 SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor Encodes a specialized sigma factor in chloroplasts and is responsible for the light-dependent transcription at the psbD LRP. similar to SIGB (SIGMA FACTOR B), DNA binding / DNA-directed RNA polymerase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G08540.1); similar to Os05g0586600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056463.1); similar to plastid sigma factor PpSIG5 [Physcomitrella patens] (GB:BAD80742.1); contains InterPro domain Sigma-70 region 4; (InterPro:IPR007630); contains InterPro domain Sigma-70 region 3; (InterPro:IPR007624); contains InterPro domain Sigma-70 factor; (InterPro:IPR000943); contains InterPro domain Sigma-70 region 2; (InterPro:IPR007627); contains InterPro domain Sigma factor, region 2; (InterPro:IPR013325); contains InterPro domain Sigma factor, regions 3 and 4; (InterPro:IPR013324); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.444175074290225 3.9502797206133 0.00244709234156479 0.0378384633413189 6.50163519102464 19.7506377651485 0.444175074290225 0.129583997154546 AT5G50810_at 6.63875037567657 7.39879227941964 7.40907945150249 7.61453781593778 7.5799544167372 7.53121528816387 6.74850967377974 7.42528759602898 6.94996216349394 6.91350984175244 7.53869897817897 7.77546931265363 7.20460025615315 7.46280787191544 8.0370748158224 7.76108249597415 7.23964486837 7.65099058090381 7.10953305234455 0.182529693437149 0.187609570419772 0.184319127861695 0.183699484726770 0.180048334317095 0.193885588574142 0.190289138805959 0.198885574984367 0.198232330271650 0.186555805260342 0.178610085511813 0.178174414087822 0.187283523151187 0.179650754323261 0.185861928953535 0.185007937953255 0.192497874937638 0.185646663002074 0.182761174462756 5 5|0 -|/ 20693103 20693705 20693234 20692860 20693838 - gene protein_coding_gene TRUE TRUE AT5G50810.1 TIM8 (Arabidopsis thaliana translocase inner membrane subunit 8); protein translocase Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Identical to Mitochondrial import inner membrane translocase subunit Tim8 (TIM8) [Arabidopsis Thaliana] (GB:Q9XGY4); similar to TIM13 (TIM13), protein translocase [Arabidopsis thaliana] (TAIR:AT1G61570.1); similar to small zinc finger-like protein [Malus x domestica] (GB:AAD39991.1); contains InterPro domain Zinc finger, Tim10/DDP-type; (InterPro:IPR004217) 0.536828111745951 3.94412687742834 0.00247246315508620 0.0382171331296864 6.49134428845541 14.5806647788358 0.536828111745951 0.179867051430593 AT5G19760_at 11.5515818636111 11.5924568262921 11.9774341216604 12.0186537690776 11.8700052456499 11.8252763351760 12.3349699815384 12.2723292173682 11.9641208939467 11.9842325992184 12.6187905115993 12.5870400831872 12.5207521974701 12.5728285595475 12.6612718282696 12.7051125905976 12.3907644298702 12.5676323464750 11.8505855739690 0.067052429548643 0.0654698518828013 0.0687671994110512 0.067827942186756 0.0666109264940864 0.072993241912547 0.066075949571281 0.0664856834458364 0.073549440610383 0.0659011187869525 0.0654698518828013 0.0661145645269939 0.0662526040905866 0.0667278444135181 0.0654698518828013 0.0654698518828013 0.0724471860884147 0.0657447571330554 0.0661695658529419 5 5|0 -|/ 6679755 6680770 6680337.9 6679308 6682003 - gene protein_coding_gene TRUE TRUE AT5G19760.1 dicarboxylate/tricarboxylate carrier (DTC) similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G22500.1); similar to Mitochondrial carrier protein [Medicago truncatula] (GB:ABE79078.1); similar to oxoglutarate malate translocator [Solanum tuberosum] (GB:CAA68164.1); similar to dicarboxylate/tricarboxylate carrier [Nicotiana tabacum] (GB:CAC84547.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.315026137510442 3.93775665566135 0.00249901933080892 0.0386000924917745 6.48068572947837 24.1858402987576 0.315026137510442 0.0166837285662307 AT5G49510_at 7.85389114505664 7.94916173185653 8.4205513982675 8.57505192540372 8.78573345429424 8.13729810580975 8.28031053899413 8.2879503215651 7.43342492459885 7.45667662581758 7.849088439751 7.85961186630169 8.04312346241834 8.07799109142235 8.01532793298626 8.03237284970958 7.64958789816386 7.80207060067579 7.49460979621911 0.209963719904233 0.201296400414413 0.201560925721372 0.208466023251576 0.205423970149066 0.211371819031347 0.199146087669393 0.199585670651379 0.209566182470354 0.197672998417632 0.206650061011428 0.196131771701712 0.199675636359130 0.206197505557592 0.196341462992214 0.203325689228075 0.214847026703972 0.211186769008107 0.203581445277957 5 5|0 +|/ 20097959 20099641 20098819 20097840 20100147 + gene protein_coding_gene TRUE TRUE AT5G49510.1|AT5G49510.2 VHL binding protein, putative / prefoldin, putative|protein binding Identical to Probable prefoldin subunit 3 [Arabidopsis Thaliana] (GB:P57741); similar to Vbp1-prov protein [Xenopus laevis] (GB:AAH54252.1); similar to Os12g0562900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067032.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Prefoldin alpha-like; (InterPro:IPR004127) 0.420703302687899 3.93524108005903 0.00250958797509670 0.0387495321789253 6.47647556740815 15.9751021859345 0.420703302687899 0.116535795063323 AT5G07770_at 5.92697849439649 5.79106804338356 6.02709559749368 5.91225900424873 5.42949941417736 5.65005905570717 3.56887036225342 3.68297772062873 4.66960575702816 4.35585095651113 4.14375418368363 4.62295437562581 3.94999518519581 4.06046487391224 4.00838196424708 3.87941124900061 4.91815524651111 4.46017732269174 4.75642184967697 0.284688252763253 0.280507460048157 0.291394921214541 0.287622518851248 0.292285763060059 0.280839915892291 0.279435544082223 0.283754161052655 0.279435544082223 0.279435544082223 0.282106892764587 0.279435544082223 0.283318325844305 0.279435544082223 0.282955609112396 0.279710404868830 0.280546212009154 0.283752583154362 0.286473976732443 5 5 + 2478604 2478990 2478811.5 2474643 2479338 + gene protein_coding_gene TRUE TRUE AT5G07770.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07780.1); similar to putative diaphanous homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC55695.1); similar to Os07g0596300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060171.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) 0.336853445888803 3.92871148825865 0.00253723854607453 0.0391625266851863 6.46554439995707 9.67328662212643 0.336853445888803 0.0528670352877006 AT5G48670_at 3.02466709149281 3.02092735961205 3.33841859667912 3.82399804072534 3.36208945393923 3.13011077186099 2.76557098147406 3.09624079498541 2.73565709744277 2.91648787219438 3.04183065204801 3.17321070143613 3.38408876868261 3.50317116822964 2.81484875937325 3.14312746557406 3.37299432101778 3.52151759934255 2.94046404326995 0.258409845373386 0.25486023571932 0.261898543690010 0.263872224417570 0.261708510991821 0.24959609046219 0.249690622567189 0.252352079438132 0.257767228070618 0.253703936202687 0.250475670394737 0.256548235904671 0.24959609046219 0.249831768731677 0.251515543182691 0.24959609046219 0.24959609046219 0.253403436548792 0.25099655062423 5 5 - 19756079 19756492 19756277.273 19755942 19757067 - gene protein_coding_gene TRUE TRUE AT5G48670.1 AGL80/FEM111 (AGAMOUS-LIKE80); DNA binding / transcription factor AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. similar to MADS-box protein (AGL35) [Arabidopsis thaliana] (TAIR:AT5G26630.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE94129.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) 0.408474167035363 3.92839486639162 0.00253858737321243 0.0391694017135844 6.46501423466207 6.24952872822881 0.408474167035363 0.109306730964160 AT5G05340_at 1.01888052182099 1.13923317178717 2.88481240753377 3.06476207942129 0.898866388650055 1.28781690918325 0.382738585975080 0.920916183485956 0.879778793929811 2.30939835411448 1.09887089624149 0.840877613766943 0.907105105469281 0.806555265049826 0.930342563696323 0.813581272323132 1.02429958555185 1.33723992731322 0.664787892255225 0.230551228552297 0.232008537595389 0.238018931735348 0.236566418879638 0.236628295800445 0.231322951065093 0.238245072729254 0.234985278450806 0.230551228552297 0.238539428599542 0.230551228552297 0.230551228552297 0.233875342204656 0.230551228552297 0.233519354086154 0.236043414641290 0.231317874864774 0.230551228552297 0.230575170715402 5 5 - 1579237 1580294 1579589.273 1578952 1580876 - gene protein_coding_gene TRUE TRUE AT5G05340.1 peroxidase, putative Identical to Peroxidase 52 precursor (EC 1.11.1.7) (Atperox P52) (ATP49) (PER52) [Arabidopsis Thaliana] (GB:Q9FLC0); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58400.1); similar to Peroxidase P7 (TP7) (GB:P00434); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.426913172836566 3.92714771306967 0.00254390758838279 0.0392375270021341 6.46292584892796 2.57701030203703 0.426913172836566 0.120864067978775 AT5G64930_at 7.8306773988454 8.06949520729127 8.73428705542902 8.79561208993628 8.97759089340033 8.92004864370038 8.22895201294352 8.60169374042593 8.70420070944803 8.55137211508797 8.81774553569963 8.62246912843415 8.74991125964032 8.78771116590744 8.36899308054938 9.12541241290858 8.30737024441638 8.5031575202457 8.56436413663189 0.168641305400875 0.151968267566354 0.153440562864249 0.153161241896274 0.159403965469314 0.160219892894289 0.165025969418984 0.153771012202711 0.177359591732537 0.163665165642525 0.151968267566354 0.153347131365755 0.157318392399074 0.168832871634926 0.164282561320842 0.151968267566354 0.172569269118414 0.162146853525600 0.160530388946573 5 5 - 25963136 25963655 25963356.636 25962938 25965567 - gene protein_coding_gene TRUE TRUE AT5G64930.1 CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR). Identical to Protein CPR-5 (Protein constitutive expression of pathogenesis-related genes 5) (Protein constitutive expression of PR genes 5) (Protein hypersenescence-1) (CPR5) [Arabidopsis Thaliana] (GB:Q9LV85;GB:Q8W3U8); similar to HYS1-related [Medicago truncatula] (GB:ABE89402.1) 0.363940360246271 3.92589596824251 0.0025492590721309 0.0393060859560948 6.46082961678822 17.1532906038454 0.363940360246271 0.0779787870300773 AT5G65490_at 4.25640111023303 4.8818665479212 5.08885668170143 5.41881972078034 6.07154479019584 5.58887865713498 4.48483690324295 4.72284013227709 4.35744797356593 4.63480812266188 4.41340836487697 4.43331098842128 4.74502665451218 4.24978159567753 4.54902667260289 5.48825359159054 5.34772257351519 4.70581690661366 5.19233536525284 0.231807612638073 0.231311808841018 0.240037946711096 0.234261993285522 0.230986871662410 0.237060963903124 0.230898414313868 0.227031340451086 0.234847214217001 0.236663940184716 0.227632000971718 0.236067195987001 0.229675948685247 0.246461440460569 0.231317813225131 0.228108438325152 0.227031340451086 0.227031340451086 0.235757336101071 5 5 - 26195241 26196086 26195549.273 26195026 26197542 - gene protein_coding_gene TRUE TRUE AT5G65490.1 Identical to SGT1 protein homolog At5g65490 [Arabidopsis Thaliana] (GB:Q9LSM5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to suppressor-like protein [Lycopersicon esculentum] (GB:AAK84474.1); contains InterPro domain SGT1; (InterPro:IPR010770) 0.484442526841986 3.92475860865098 0.00255413170391642 0.0393672155484707 6.45892480270236 9.79912585408744 0.484442526841986 0.153784630841176 AT5G62580_at 3.94735145397241 3.64501045245276 3.52769215946619 3.48321386199693 3.09669603357550 3.23050609981477 4.02762772962782 4.3112579434115 3.8234691401888 4.40146658965387 5.97508890333063 6.84558593316302 5.28592272338709 5.66745590417332 6.53463617216031 5.29402890318088 4.27670810272188 5.08603787531116 4.52570738718389 0.248668438548745 0.235506956239814 0.250409061132408 0.249930130408465 0.251212225138966 0.272446353209029 0.244234940232556 0.243782877177442 0.24265215323982 0.236705066515251 0.251129166458900 0.247402562154239 0.235506956239814 0.249488988213841 0.247934719397159 0.237035871347557 0.253183384630114 0.236246286838589 0.235939019067204 5 5 + 25138678 25139244 25139007 25137089 25139752 + gene protein_coding_gene TRUE TRUE AT5G62580.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT1G27210.1); similar to Os02g0739900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048070.1); similar to Os06g0244700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057275.1); similar to putative potyviral helper component protease-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD45803.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.361091918091789 3.9244971160417 0.00255525335162258 0.0393705077584262 6.45848684467698 8.5941181853001 0.361091918091789 0.0757773219712474 AT5G05170_at 10.7347541235364 10.9585827820680 10.8988812041635 11.0874268728510 11.4313790227939 10.8141875869312 11.1798826124758 11.2778473499438 11.4655538469544 11.3577020715938 12.6236271318652 12.3710407921134 12.2583052424151 12.3459187280408 12.2804086333828 12.0651714050572 11.3952424865915 12.4292062869627 11.3555990485588 0.0767464117085742 0.0704226522246514 0.0735384700244198 0.0744827317425965 0.0717447680286906 0.0875373912425489 0.0707078307635149 0.0732078261949415 0.0803293788563432 0.0731871374642557 0.071748513239906 0.0709747284902795 0.0716151780790561 0.0718699462025263 0.0705718751130643 0.069723972751497 0.0876043253834706 0.077333364684711 0.0706331334224122 5 5 - 1530446 1530921 1530697.545 1530175 1535415 - gene protein_coding_gene TRUE TRUE AT5G05170.1 CESA3 (CELLULASE SYNTHASE 3); cellulose synthase/ transferase, transferring glycosyl groups cellulose synthase. Involved in defense signaling. Identical to Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben- resistant protein 1) (Ath-B) (CESA3) [Arabidopsis Thaliana] (GB:Q941L0;GB:O48948;GB:Q9FHK6); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to CESA10 (CELLULASE SYNTHASE 10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G25540.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to CesA2 [Acacia man (GB:AAT66941.1); similar to cellulose synthase 4 [Eucalyptus grandis] (GB:AAY60846.1); similar to cellulose synthase catalytic subunit [Gossypium hirsutum] (GB:AAD39534.2); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.424182693640074 3.92391968918838 0.00255773198731871 0.0393946982290173 6.45751972326583 22.8549010663484 0.424182693640074 0.119416633253493 AT5G14660_at 8.69113505739376 8.61977769409139 8.6899546971456 8.84529893949678 9.15345441512189 8.80248629876458 9.26936327479029 9.4121555749523 9.0507623295269 8.86151400417275 9.57947825457947 9.97750006878762 9.7208247764332 9.86488186504313 9.79237162543685 9.9543687215071 9.48811766541781 9.7363082854255 8.86729543522252 0.120310308936880 0.116971165960485 0.120021338768453 0.117990296705005 0.130400717570671 0.117762020216181 0.115293874147984 0.118462247996986 0.131014587759737 0.113220109567137 0.116822547494857 0.114905070385154 0.117855766433360 0.114926073885031 0.120411386298083 0.113733622825776 0.123694290010713 0.122760826753211 0.11838875587383 5 5|0 -|/ 4727182 4728311 4727894.714 4726644 4728749 - gene protein_coding_gene TRUE TRUE AT5G14660.1|AT5G14660.2 PDF1B (PEPTIDE DEFORMYLASE 1B); peptide deformylase encodes a peptide deformylase-like protein Identical to Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) (PDF1B) [Arabidopsis Thaliana] (GB:Q9FUZ2;GB:Q8LEH0;GB:Q949U8;GB:Q9LYJ4); similar to PDF1A (PEPTIDE DEFORMYLASE 1A), peptide deformylase [Arabidopsis thaliana] (TAIR:AT1G15390.1); similar to Peptide deformylase, chloroplast precursor (PDF) (Polypeptide deformylase) (GB:Q9FV54); contains InterPro domain Formylmethionine deformylase; (InterPro:IPR000181) 0.35619908609003 3.92132023848288 0.00256892132633877 0.0395529878654296 6.45316553668303 18.2808309093710 0.35619908609003 0.0719358006616181 AT5G64420_at 5.38541177290976 5.19246684794472 5.28379739566416 5.42112630804871 5.29283654977969 5.46466934577829 5.14300267522107 5.53953880431123 4.52262821335226 4.70424444186524 5.32139089931783 5.74247553045944 5.45093188641975 4.79200920314152 5.17232088425333 5.4448386666018 5.43198711887138 4.66174293579653 4.44568830850674 0.172944043031448 0.169556700283238 0.178529195150600 0.171711787275010 0.172929381011909 0.17718001683781 0.17021721549963 0.176658889237913 0.182546486845930 0.178746347689752 0.169556700283238 0.173342773116005 0.17032713692771 0.169556700283238 0.176563402255041 0.176821332613518 0.175967027273391 0.178594449497502 0.175210249782776 5 5 + 25777749 25778300 25778040.182 25773558 25778567 + gene protein_coding_gene TRUE TRUE AT5G64420.1 DNA polymerase V family similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT5G63740.1); similar to Os02g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045819.1); similar to hypothetical protein CC1G_03896 [Coprinopsis cinerea okayama7#130] (GB:EAU88224.1); contains InterPro domain DNA polymerase V; (InterPro:IPR007015) 0.372597097043651 3.91784693298090 0.00258395181710167 0.039770285301744 6.44734654861606 10.2452224433818 0.372597097043651 0.0852817853067572 AT5G48450_at 2.11771786483065 2.26903269834219 2.04723353342577 2.05291275086289 2.00779554754225 1.79046619969442 1.83494532737916 2.12484997260113 2.92966567025720 2.77673930176017 3.81516732317645 4.15394190799932 3.12551819158744 3.73983086977966 4.69610875164351 3.04761706814087 2.71079403996568 3.2757805489605 2.56609364905253 0.174521699550070 0.175388788759345 0.183396670560907 0.184261428348263 0.175385663961376 0.175876425604900 0.178042082530772 0.179404712819577 0.186070062253521 0.178828048220442 0.184836695386092 0.184928953896281 0.174976671151268 0.180915303855168 0.172189780720424 0.173566115966411 0.184277474053245 0.181320491526430 0.172189780720424 5 5|0 -|/ 19650531 19651247 19650877.6 19650521 19652890 - gene protein_coding_gene TRUE TRUE AT5G48450.1 SKS3 (SKU5 Similar 3); copper ion binding similar to SKS1 (SKU5 SIMILAR 1), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G25240.1); similar to SKU5 (skewed 5), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G12420.1); similar to SKS2 (SKU5 SIMILAR 2), copper ion binding [Arabidopsis thaliana] (TAIR:AT5G51480.1); similar to C-terminal peptide-binding protein 1 [Zea mays] (GB:BAE95064.1); similar to Os01g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041735.1); similar to putative pectinesterase [Oryza sativa (japonica cultivar-group)] (GB:BAC55686.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.350530419696549 3.90908343995331 0.00262228376085616 0.0403459400709606 6.43265930578749 5.19466642584146 0.350530419696549 0.067956779745714 AT5G63480_at 4.86145173570377 5.10375570154735 5.24843550953589 4.66635266131355 6.57120028839351 6.19555629094125 5.30268779816866 5.17137381890424 5.94307959513013 5.13031055618304 6.03732888834118 5.97227600772445 5.98091079626973 5.93796292079862 5.08481674784805 5.42458394784281 5.72344835188574 5.37817232361749 5.05507749689644 0.267623134858878 0.263341910913802 0.271014819060535 0.273538352235998 0.263179327192854 0.263832126647595 0.265012857894510 0.271815697704214 0.269903655993753 0.270304819838202 0.268953414021179 0.26110210711207 0.267883648651683 0.266868727346894 0.270254128244708 0.26110210711207 0.296290560598809 0.272992388741901 0.270107107435729 5 5 + 25434551 25435673 25434873 25434491 25435861 + gene protein_coding_gene TRUE TRUE AT5G63480.1 similar to OSJNBa0053B21.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05534.2); similar to OSIGBa0096P03.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66428.1); contains InterPro domain Apolipophorin III-like; (InterPro:IPR011000) 0.438425269634761 3.90759238970335 0.00262886441666194 0.0404328406788812 6.43015960738474 10.9243984159523 0.438425269634761 0.129025387343085 AT5G45560_at 2.45475711035325 2.36809566954576 2.3345364061421 2.56318565729488 3.21771302011101 2.50728311588619 3.18521768576044 2.5032053185519 3.36763488572498 2.81331569614887 4.31192034571584 4.6582377579232 3.93381572154728 4.31948781230363 4.04796451745630 3.98476499911592 3.59508888730942 4.14863858768990 3.13788939018344 0.201817953591635 0.202467168220822 0.201869153671817 0.217727772090467 0.200645312867008 0.206628541857023 0.208665288519805 0.199389256022121 0.201170197687231 0.197689902165498 0.197689902165498 0.207451568086891 0.203003047016378 0.205502690159736 0.211789247710083 0.201989025357490 0.205479721663357 0.197689902165498 0.204201103234549 5 5 + 18486830 18487944 18487430.364 18482582 18488153 + gene protein_coding_gene TRUE TRUE AT5G45560.1 pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein similar to EDR2 (enhanced disease resistance 2), lipid binding [Arabidopsis thaliana] (TAIR:AT4G19040.1); similar to START domain-containing protein [Poa pratensis] (GB:CAH10188.1); similar to START domain-containing protein [Poa pratensis] (GB:CAH10187.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) 0.523285220876317 3.90553305765394 0.00263798143932157 0.0405586760180487 6.42670683978685 6.25738415761491 0.523285220876317 0.17560079412819 AT5G17250_at 2.99288359763341 2.87341475279938 3.30285827936687 3.04642206882669 4.2897516699013 3.46032570947949 3.67556949184089 2.84200821183508 3.38024769819649 2.71894056923045 3.68709853131881 3.75567516516852 4.1969483877572 4.01395838271592 3.90912262709014 3.62298316533564 3.1854742889328 4.13996709765482 3.09931603613563 0.253706078515578 0.256352915033163 0.261688595167777 0.254632215903827 0.255300435885052 0.275401413832586 0.253706078515578 0.263392420901962 0.260945783147375 0.258137936827820 0.258504243175299 0.253706078515578 0.253706078515578 0.254363856846501 0.260847392687687 0.253706078515578 0.264058231330833 0.255599789968933 0.25607400605991 5 5|0 -|/ 5669005 5669922 5669401.1 5668902 5673518 - gene protein_coding_gene TRUE TRUE AT5G17250.1 phosphatidylinositolglycan class O (PIG-O) family protein similar to transferase [Arabidopsis thaliana] (TAIR:AT2G22530.1); similar to phosphatidylinositolglycan class O, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46881.2); similar to Os10g0170300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064233.1); contains domain Alkaline phosphatase-like (SSF53649); contains domain no description (G3D.3.40.1150.10); contains domain FAMILY NOT NAMED (PTHR23071); contains domain PHOSPHATIDYLINOSITOL GLYCAN (PTHR23071:SF2) 0.588302886462802 3.8913375506194 0.00270172984706808 0.041524075963048 6.40289463089079 6.75044000117752 0.588302886462802 0.209303457382498 AT5G17790_at 4.03295693903503 4.28051079214623 4.61955046604836 4.59941336809839 4.53092053600881 4.69840338922885 5.41449125804302 5.25699516112817 4.11891879383351 4.92960646307997 5.18375118268189 5.82308734634084 5.10663318065281 5.28239543257407 5.88946987340743 5.59206016466044 5.49740979261816 5.45217049316576 4.95593030928993 0.211893357449436 0.211776391999118 0.213932443657124 0.214076345572652 0.222111764120633 0.209763092935893 0.212554342632289 0.21826210950716 0.214744922900637 0.210123440067465 0.211368693078085 0.208984033860651 0.216929963979993 0.214031152825336 0.210598334260587 0.22027075711367 0.213809140134220 0.207238790574670 0.214991326887613 5 5 - 5869822 5870377 5870096.545 5869712 5872720 - gene protein_coding_gene TRUE TRUE AT5G17790.1 VAR3 (VARIEGATED 3); binding Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells. Identical to Zinc finger protein VAR3, chloroplast precursor (VARIEGATED 3 protein) (VAR3) [Arabidopsis Thaliana] (GB:Q8S9K3;GB:Q64M74;GB:Q9FN73); similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT1G55040.1); similar to Zinc finger, RanBP2-type [Medicago truncatula] (GB:ABE90693.1); similar to Os01g0815700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044614.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) 0.338026865059765 3.87952351914215 0.00275600578972861 0.0423432568143697 6.38306217610329 9.75241725804901 0.338026865059765 0.0585692099734982 AT5G50900_at 6.72913868477225 7.83295192541215 7.61254694467772 7.89106657990565 8.31436341954045 8.15141981244204 7.66532511120652 7.94997157348397 7.84728274708495 7.5673006427159 8.86273802593685 8.6744213947709 8.5097505280752 8.93799731005116 8.3551563023042 8.50340451110448 7.96453931172095 8.4472535194933 8.05989529059708 0.176874687697133 0.160777742579823 0.160699527322147 0.166694404454366 0.164521928706759 0.160217506136238 0.163856310473221 0.161827515033828 0.168837137431446 0.162165203670317 0.161632605650461 0.160636406448071 0.159436386223094 0.160466595702188 0.160460892170153 0.157437731586733 0.171951229721021 0.165028343884622 0.160480418783337 5 5 - 20722278 20722784 20722489.182 20722030 20724004 - gene protein_coding_gene TRUE TRUE AT5G50900.1 armadillo/beta-catenin repeat family protein similar to binding [Arabidopsis thaliana] (TAIR:AT2G45720.2); similar to Armadillo [Medicago truncatula] (GB:ABE89397.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.577541875777782 3.87748514230573 0.00276548469128622 0.0424738396315807 6.37963894053672 15.9467149262958 0.577541875777782 0.20502056221514 AT5G06440_at 4.87514958253981 4.65680181900421 6.20846666414457 5.37853146334363 7.41022316809128 5.76506624754886 5.87857857081718 4.30996975322826 6.12012633516523 6.20333557938358 7.9287314074949 7.66137871833429 7.15320788704847 6.9546979546208 6.58725188871872 7.14693357663469 6.94101207160864 6.00873867356526 6.31221741454192 0.196894966392359 0.195372375041621 0.192885321734461 0.192885321734461 0.204831649666338 0.199102750905646 0.196481909288729 0.200737759445717 0.203649732159887 0.195802117065652 0.203791834012202 0.193550001665096 0.200221335727696 0.201629911062598 0.199405660496558 0.193122114285939 0.200943977702669 0.198152160316099 0.202028482538125 5 5 - 1964642 1965204 1964930.636 1964469 1967330 - gene protein_coding_gene TRUE TRUE AT5G06440.1|AT5G06440.2|AT5G06440.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11720.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94317.2); contains domain Bet v1-like (SSF55961)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11720.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94317.2); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) 1.04814893347052 3.8758643119014 0.00277304612127324 0.0425748908100995 6.37691664286882 12.1901669745648 1.04814893347052 0.420474513820744 AT5G40660_at 5.69198572835761 5.92946510258259 6.50246420654756 6.42054092956004 6.61683812889145 5.87275852565182 5.66692563146185 5.99799686039713 5.04295342350196 4.82707576843451 5.20365720416179 5.07621521610896 5.32205304566979 5.20143511629631 5.37616838221123 5.17042260355774 5.14254108053085 5.22630533804774 4.56840446768794 0.254354854668057 0.24954793175986 0.257301367820902 0.257001924355558 0.253024379062982 0.264165753613336 0.247199351820452 0.252841290566260 0.256756637765592 0.246303962956301 0.245687591224776 0.251183806694074 0.251265431620819 0.253930996745487 0.245687591224776 0.248262279544928 0.253325685826616 0.245687591224776 0.2493209646537 5 5 - 16300881 16301987 16301262.273 16300736 16302554 - gene protein_coding_gene TRUE TRUE AT5G40660.1 ATP12 protein-related similar to F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri] (GB:CAL57693.1); similar to Os07g0644000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060445.1); contains InterPro domain ATP12 ATPase; (InterPro:IPR011419) 0.466797822705587 3.87405585194379 0.0027815082726148 0.0426896944296365 6.37387890908965 11.1012023732802 0.466797822705587 0.147489941813020 AT5G01190_at 2.26717298713950 2.37201479763549 2.81287005095702 2.78886495902098 2.58324261414404 2.64407761538574 2.78296651048317 2.65286093760573 2.7540428006617 2.75347079002301 2.92350286659419 3.62058617387807 3.3515834344257 3.24552491717349 3.60784327782153 3.27047444949312 3.46404715692559 3.40299813296702 3.24632728093945 0.208834934783112 0.206459392919112 0.20376734638472 0.202140222878537 0.20388608618003 0.214280970789133 0.202140222878537 0.214898504798801 0.212625117276648 0.210036290848045 0.204675490342257 0.202140222878537 0.214971729834542 0.207117683496816 0.207845960060698 0.204877412883241 0.221462452718495 0.208415017333549 0.205573430943489 5 5 + 73900 74560 74095.818 72391 74755 + gene protein_coding_gene TRUE TRUE AT5G01190.1 LAC10 (laccase 10); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to diphenol oxidase (GB:AAC49536.1); similar to laccase [Populus trichocarpa] (GB:CAA74103.1); similar to laccase (EC 1.10.3.2) precursor - common tobacco [Oryza sativa (japonica cultivar-group)] (GB:AAX95423.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.315691547806379 3.86849176161862 0.00280771269741935 0.0430766231519653 6.36453073736228 5.75239231323041 0.315691547806379 0.0310518166601939 AT5G47840_at 10.9038701375585 10.7837349262255 11.1969991222896 11.0084941650204 11.4913553049200 11.2120591965529 11.2934077219352 11.0748360204062 11.3582844921283 11.2847650911491 11.9653309641415 11.8857137710012 11.6718067806259 11.8142335103293 11.8179109638263 11.9028829574205 11.2723348850310 11.8320950399146 11.1950564297435 0.078585118904048 0.0749187273893592 0.0763352160788798 0.0764508362829253 0.0762121780556679 0.0767239684611187 0.0764271246716087 0.0758049205659243 0.08893012604961 0.0746287666102189 0.0763949189508105 0.0757966973355555 0.0742965592826236 0.0760695764867924 0.0770617859476963 0.0742965592826236 0.0884140389026781 0.078707217992062 0.0761204287360511 5 5|0 +|/ 19394190 19395253 19394823.5 19392667 19395565 + gene protein_coding_gene TRUE TRUE AT5G47840.1 adenylate kinase, chloroplast, putative / ATP-AMP transphosphorylase, putative Identical to Probable adenylate kinase 2, chloroplast precursor (EC 2.7.4.3) (ATP- AMP transphosphorylase) [Arabidopsis Thaliana] (GB:Q9FIJ7); similar to nucleotide kinase [Arabidopsis thaliana] (TAIR:AT5G35170.2); similar to Os08g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060810.1); similar to Adenylate kinase, chloroplast (ATP-AMP transphosphorylase) (GB:P43188); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) 0.352092341846862 3.86827709532776 0.00280872881284917 0.043076969557377 6.36417001916264 22.6454232143852 0.352092341846862 0.0725481999783239 AT5G23890_at 7.85673892082115 7.68621914585863 8.24108137874253 7.74065905734344 7.88362043653215 7.69209372891384 7.81131779133208 7.4372544190755 7.30337776825675 7.69255953284093 8.13490937728714 8.26206308376211 7.7353884907574 7.99040081959671 8.11307409653942 7.97098575998436 8.11045049432816 8.20913269505473 7.29238334631431 0.148914564114933 0.144813909858841 0.148700109702622 0.149757939921377 0.145594660150049 0.146907943212971 0.154688288235074 0.142686171078432 0.148740447759122 0.142686171078432 0.152740157503525 0.147238856074415 0.15169662106584 0.148450380551851 0.145055347548395 0.153810595192970 0.147163863599517 0.144434027382532 0.142697757283805 5 5|0 +|/ 8062313 8062973 8062674 8058692 8063204 + gene protein_coding_gene TRUE TRUE AT5G23890.1 similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT5G52410.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44759.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1) 0.413920733735456 3.86676023835988 0.00281591971462725 0.0431719838203576 6.36162101664823 15.5412435188113 0.413920733735456 0.116873461057517 AT5G54890_at 4.71738215536674 4.21157100233282 4.5974318467973 5.07449617591816 5.32027765681325 4.91543816189746 4.51325687589302 4.58444221347135 4.2307752928842 4.39115634937079 4.90739401386899 4.90968172946088 4.66710395051962 4.82008986073266 4.48542260767322 5.03156018608993 4.65980681359849 4.69624453973418 4.39186326464677 0.185160957763838 0.18526842424988 0.206484529026252 0.190683893184105 0.196190485296342 0.192406735341130 0.182299614986663 0.185347747844065 0.199344170328123 0.182299614986663 0.187051613238988 0.189458356332084 0.185432455506665 0.182750859828014 0.189627881456031 0.182299614986663 0.190263170356111 0.183405556112857 0.182299614986663 5 5|0 +|/ 22311380 22312051 22311687.6 22310551 22312370 + gene protein_coding_gene TRUE TRUE AT5G54890.1 similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G31010.1); similar to Os08g0188000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061154.1); similar to Protein of unknown function UPF0044 [Medicago truncatula] (GB:ABE81273.1); similar to Os08g0174900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061110.1); contains InterPro domain CRS1/YhbY; (InterPro:IPR001890) 0.452239612833191 3.86640436961014 0.00281760953934742 0.0431826215263069 6.36102296506085 9.2968343102331 0.452239612833191 0.139778220486609 AT5G08210_at 3.88747139575602 3.14625192652833 4.17413071967963 3.71913779558998 4.06787062478394 3.87646584917096 2.57230189891154 2.9080281105672 3.65257215941702 3.40153650656910 3.80220921180116 4.1630587385928 3.8564321232458 3.86963671999951 3.74773021405747 4.54060053740905 3.83742637544222 3.66511715432778 4.26532032161079 0.202451052622534 0.199263045767225 0.20342197931499 0.208519004627917 0.199263045767225 0.207152718773436 0.207144341149807 0.216766742856149 0.214899975269041 0.201821363834419 0.207068607167879 0.199263045767225 0.200778506300400 0.204249657557792 0.199263045767225 0.201894892836031 0.206616504186566 0.210143544326666 0.199263045767225 5 5 - 2641466 2641642 2641554.818 2641265 2641761 - gene protein_coding_gene TRUE TRUE AT5G08210.1 unknown protein 0.496510651429595 3.85951613284926 0.00285052664801501 0.0436716712654454 6.34944462770465 7.398166980236 0.496510651429595 0.164699746606012 AT5G53920_at 2.31875751551941 2.60046447928367 3.07814878439612 2.89282530649526 2.8266339712512 2.94934756448727 2.66025738459227 2.31455234559268 2.05887350005072 2.37248691316129 2.21110465276938 2.08702225016763 2.18668386110506 2.07538415847857 2.02311735569884 1.90052219597814 3.07454015039698 2.24173005023293 1.42476205989483 0.224128779384639 0.209882779892645 0.214140982861406 0.214561111527529 0.216770278659584 0.216501671974662 0.21512283290751 0.212131893165619 0.217825469554039 0.215015753574618 0.216661939262035 0.216356972931594 0.211555228508093 0.213047876301272 0.221482857234178 0.222002233500283 0.216294316953164 0.215894283894704 0.221711469349679 5 5|0 +|/ 21910313 21911220 21910799.444 21909350 21911493 + gene protein_coding_gene TRUE TRUE AT5G53920.1 ribosomal protein L11 methyltransferase-related similar to Ribosomal protein L11 methyltransferase [Burkholderia xenovorans LB400] (GB:YP_560455.1); similar to Os05g0497600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055944.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Ribosomal L11 methyltransferase; (InterPro:IPR010456); contains InterPro domain Ribosomal protein L11 methyltransferase; (InterPro:IPR004498) 0.368101617697475 3.85751391482428 0.00286016958362769 0.0438039280420156 6.34607828134415 4.79365037331343 0.368101617697475 0.0862281577983996 AT5G49120_at 1.38000755294496 1.33589564020049 1.48740204238167 1.7313959693235 1.92508795417062 1.55015976987646 1.48339323772962 1.37820432599567 2.04908690353576 1.37606355062536 2.05560712297483 2.12857189217975 2.09293586074579 1.64125390255528 1.99958945880971 1.89085270467385 2.16681230508743 1.85283068341481 1.18990400414883 0.216179062715746 0.214574819148919 0.214574819148919 0.217893213464592 0.215620500920184 0.222967442958433 0.217700285655633 0.220903021368675 0.232803037733720 0.223811788211373 0.223013539975133 0.225180674813885 0.220501095603365 0.214574819148919 0.224765230300962 0.214574819148919 0.221994000415190 0.219929763006633 0.217341417813087 5 5 - 19926026 19926431 19926264.273 19925854 19926625 - gene protein_coding_gene TRUE TRUE AT5G49120.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G78020.1); similar to Os02g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047297.1); similar to hypothetical protein LOC_Os11g43790 [Oryza sativa (japonica cultivar-group)] (GB:ABA95187.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 0.359670749961119 3.85435005316896 0.00287547636988497 0.0440228035132636 6.34075807872573 3.29239742528213 0.359670749961119 0.079889565691428 AT5G39790_at 4.47292819191318 4.62553087710865 4.31050098526085 4.31787704236503 4.20625158830202 3.75303157515812 5.11661095940245 4.85965331384301 2.48688703031683 4.47807960724865 4.85012203878053 4.72333959113943 4.61596238900249 4.80937089242266 5.0847619782256 4.95158980636385 4.8108360264865 5.47262130000352 3.64943786152715 0.235325719983491 0.228295349713755 0.231467041190449 0.229553917039704 0.233497530697868 0.235552627157735 0.234349974999464 0.227872810963574 0.254290163721275 0.230879091584651 0.233236164443058 0.235150419365913 0.226961407396824 0.244781108473782 0.235378854066563 0.227985091970704 0.244895435575895 0.226961407396824 0.229322139475987 5 0|5 /|- 15950164 15950762 15950444.25 15949942 15952489 - gene protein_coding_gene TRUE TRUE AT5G39790.1 5'-AMP-activated protein kinase beta-1 subunit-related similar to 5'-AMP-activated protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G27070.1); similar to Os02g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045821.1); similar to ampk protein [Platanus x acerifolia] (GB:CAJ91133.1); contains domain 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT (PTHR10343); contains domain gb def: AT5g39790/MKM21_80 (PTHR10343:SF2) 0.377462565988438 3.84598865607821 0.00291634035872409 0.0446326605499728 6.32669339356636 8.68427823458614 0.377462565988438 0.093957303762442 AT5G54160_at 10.1983903352460 10.3405676823115 10.8856062196785 10.9175642084252 10.7076234915243 10.3454665524123 11.1683585874355 11.1710287154691 10.7763319744482 11.1954820009671 12.1507198855614 11.7606072189246 11.4602301528045 11.6428214390741 11.8583765263361 11.1184848655046 11.2781427306274 11.7949939849701 10.8449526981758 0.0866819970862343 0.084980075125866 0.0902328539448349 0.0885466058313165 0.0870572282057636 0.0871123619964938 0.0848239317422255 0.0883400517368234 0.0931024151816452 0.0837852200268085 0.0832992696536504 0.0848753670404961 0.0832992696536504 0.0868493778496991 0.0849213972728044 0.0848187654938179 0.0858633159374754 0.0858387680080252 0.0837512678708574 5 5|0 +|/ 22000637 22001343 22001034.9 21999222 22001589 + gene protein_coding_gene TRUE TRUE AT5G54160.1 ATOMT1 (O-METHYLTRANSFERASE 1) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase Identical to Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1) (Flavonol 3- O-methyltransferase 1) (OMT1) [Arabidopsis Thaliana] (GB:Q9FK25;GB:O49964;GB:Q42170); similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77530.1); similar to O-methyltransferase [Fragaria x ananassa] (GB:AAF28353.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077); contains InterPro domain Dimerisation; (InterPro:IPR012967); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.34430183191975 3.84451038078084 0.0029236276117949 0.0447283987878572 6.32420610667896 22.0028103865657 0.34430183191975 0.0675579540124068 AT5G10530_at 1.11243719249007 1.17913723155547 1.52161086336837 1.72577194326555 1.50732211347149 1.40147991673228 1.34192385882634 1.18965009132863 1.43337050670500 1.65155694739303 1.77751421386689 2.14054741465508 2.02616911385268 1.71699716329216 1.65191371406731 1.39528471683075 2.08773734084105 1.87826531228024 1.46397332602964 0.165648710454427 0.164503121435458 0.172171323753520 0.164503121435458 0.166669260606205 0.169172566018836 0.164503121435458 0.168834083450190 0.176318137668855 0.171534410164618 0.178845541553653 0.169863345460728 0.175759735367991 0.167313786997319 0.170485783000643 0.166488289648413 0.165715294529545 0.172349230572724 0.168547914346707 5 5 - 3324991 3325523 3325191.636 3324979 3326934 - gene protein_coding_gene TRUE TRUE AT5G10530.1 lectin protein kinase, putative similar to legume lectin family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G65600.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE89762.1); similar to 117M18_32 [Brassica rapa] (GB:AAZ66951.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.325631239663754 3.83583850452598 0.00296675919957492 0.0453722563226688 6.3096110421912 3.04771859325644 0.325631239663754 0.0491062277347734 AT5G25620_at 1.78795822341361 1.53275974207681 1.71992661809205 1.64804910997173 1.98931467070414 1.84830502921217 1.62010865601037 1.84671762617893 1.61148688628996 1.78955917031523 2.10388669204938 2.01153078709561 2.37883155300335 2.12712005678139 2.10784035582261 2.29708927319439 2.51657154868012 2.25785028265917 1.54277008717553 0.224058823522152 0.219177568832848 0.226047988677308 0.237027146484391 0.22421950104094 0.249143715749151 0.222274756640801 0.221698947989773 0.244101847457866 0.225241870270171 0.221667860265784 0.219604207058003 0.226488908239549 0.228126895086339 0.220388640633257 0.227273742806846 0.218767711914020 0.226247970276270 0.226804821865140 5 5|0 -|/ 8935617 8937540 8936239.111 8935112 8938669 - gene protein_coding_gene TRUE TRUE AT5G25620.1 YUC6 (YUCCA6); monooxygenase similar to YUC2 (YUCCA2), monooxygenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G13260.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I; FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Medicago truncatula] (GB:ABE83417.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.34083207457114 3.83531180299662 0.00296940008941926 0.0453966319610049 6.30872435993427 3.68565685108464 0.34083207457114 0.0651035199732119 AT5G15270_at 6.62520520943324 6.50667666897245 6.72287986744031 6.77942234889496 7.66788040015516 6.46975806297176 6.5337529749138 6.57870781734585 5.82134071756822 5.63300038509996 6.55221287309875 6.86818933946991 6.53050182308816 6.6530539547433 6.47886555524883 6.51886027643195 6.18906014029239 6.14191367469643 5.59656511541604 0.246535631925085 0.246535631925085 0.257500699027584 0.249276388041093 0.247073164911821 0.249700672199381 0.259891125509241 0.255518435986368 0.258443306773843 0.256674680886628 0.246535631925085 0.257586833869319 0.246535631925085 0.264968818853939 0.246535631925085 0.246535631925085 0.259996522994 0.246535631925085 0.246535631925085 5 5|0 +|/ 4960139 4960711 4960450.143 4958340 4962014 + gene protein_coding_gene TRUE TRUE AT5G15270.1|AT5G15270.2 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE82473.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.578423150402429 3.83362928812685 0.00297785263046312 0.0455098084885072 6.30589173687188 12.8231442240968 0.578423150402429 0.20872746639876 AT5G67160_at 3.74038979389861 3.75241533081438 5.44026155341205 5.44252292656001 4.19000982475825 4.24610713045333 4.84465193025572 5.6443131492897 4.04169847808362 4.30690658343074 4.51268107716058 5.07439270587161 4.82533762199463 5.05109099826338 4.6422916336944 5.14746179819741 4.40295026401599 4.5751718409029 4.31172511258213 0.256782690401535 0.255373362103672 0.260563897159419 0.258258039077064 0.251221373345436 0.251221373345436 0.268466513919478 0.251221373345436 0.256896369160116 0.251221373345436 0.251221373345436 0.251500023357012 0.251221373345436 0.272306664597913 0.251221373345436 0.251515875368795 0.265023759028915 0.262250687203299 0.252850004423211 5 5 - 26814981 26815452 26815212.909 26814839 26816267 - gene protein_coding_gene TRUE TRUE AT5G67160.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G67150.1); similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus x domestica] (GB:AAV50009.1); similar to Transferase family [Medicago truncatula] (GB:ABE88091.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.446547496105878 3.83306408109071 0.00298069770102965 0.0455372378263588 6.30494011523841 9.16210010520264 0.446547496105878 0.138741357212214 AT5G06330_at 1.32772274752318 1.72688050560613 1.89122971941512 2.17116924453698 1.55154420238738 1.68945568384493 0.848834919608572 1.50670547133391 1.34199513371668 1.74900344372720 1.81701944664112 2.10342484500935 1.69983186552068 1.71723093898798 2.21475207819881 1.41453613148259 2.27708511052639 2.29364126356358 1.44013306460400 0.200940875473531 0.202358187889486 0.200940875473531 0.206702097364184 0.201644089437926 0.200940875473531 0.204198944260113 0.202150228262155 0.220698283072652 0.202546684205475 0.202039917330800 0.202319256210718 0.208200457289389 0.204160089776055 0.204815141845578 0.200940875473531 0.202746851884327 0.200940875473531 0.209310667949397 5 5 - 1935004 1935489 1935233.545 1934740 1935645 - gene protein_coding_gene TRUE TRUE AT5G06330.1 hairpin-responsive protein, putative (HIN1) similar to NHL1 (NDR1/HIN1-like 1) [Arabidopsis thaliana] (TAIR:AT3G11660.1); similar to Os12g0159600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066211.1); similar to H0913C04.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86171.1); similar to Os11g0157200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065799.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.452563398751753 3.81109855704162 0.00309348229712759 0.0472270085491554 6.26793469145063 3.31547652378566 0.452563398751753 0.143698562996137 AT5G22220_at 2.43822115086335 2.55450701505555 3.38563153460229 3.16082389470856 2.93923530080186 3.03695533312715 2.62966445475782 2.66922568175123 2.38599386291041 2.77875317019209 2.62330621006616 2.40404781442363 2.87672554035317 2.88569305397481 2.66483878464993 2.8006059064021 3.01962516862261 2.21119493006801 2.63347794729803 0.208586549551167 0.208586549551167 0.212196011741341 0.217253788427696 0.221614792797104 0.217106221851398 0.210508031155339 0.210135861006372 0.21207342014379 0.225285084379432 0.210119657523489 0.210248735486637 0.209212331313994 0.216235497053935 0.218720288025507 0.217492086794524 0.218571884554786 0.219106257058990 0.208586549551167 5 5|0 +|/ 7363125 7364087 7363656.6 7360538 7364457 + gene protein_coding_gene TRUE TRUE AT5G22220.2|AT5G22220.3 E2F1; transcription factor Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. similar to E2F3 (E2F TRANSCRIPTION FACTOR-3), transcription factor [Arabidopsis thaliana] (TAIR:AT2G36010.1); similar to E2F-related transcription factor 1 [Thlaspi caerulescens] (GB:AAM90620.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.322051644736425 3.80970164061936 0.00310080325437056 0.047322112081859 6.26557981175158 5.49436454714359 0.322051644736425 0.0474482855681935 AT5G39980_at 2.69235942800977 2.98407788049454 2.91051363067179 2.91437023627525 3.0041764774785 2.94468485980975 2.47687641902136 2.73403646168295 3.21953704290155 2.73674439542309 3.09500789640863 3.46763038693497 2.93864008303958 3.38716077034938 3.67489001378689 3.04761719672071 3.33833934127647 3.53213386174417 2.59407223910450 0.18925461622362 0.19606452840929 0.199680156420917 0.192643047523543 0.190177115419361 0.201812725510858 0.19997310040115 0.193926054322926 0.204548536439397 0.195792736119185 0.195731232828847 0.192724256911237 0.199011311627206 0.189839282025298 0.197225775124260 0.194455380078211 0.200658415277527 0.18925461622362 0.20093402268382 5 5 - 16018265 16018820 16018647.636 16017940 16020300 - gene protein_coding_gene TRUE TRUE AT5G39980.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G62930.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE89165.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.340829152531441 3.7993450507558 0.00315564456547248 0.0481421131775936 6.24811549937358 5.91278459230998 0.340829152531441 0.0680844354378992 AT5G39940_at 3.91955715287584 3.60044152137903 4.36815610508581 4.5165875982849 5.38948472289351 4.11023544154262 3.94812826247729 3.27395126206889 3.38870622474137 3.30051601330587 3.37443674672944 3.82499079759722 3.80427030900174 3.58314552767602 3.88902037546563 4.1867991342892 3.95302544159059 3.66071241820407 3.36969370160552 0.213165286949322 0.209435899695656 0.221146552046189 0.213104074418213 0.219715529334396 0.214312841857315 0.208902030929134 0.217515242134707 0.221567792743052 0.232642232374511 0.208902030929134 0.211856545052349 0.208902030929134 0.218461153344420 0.211916818285669 0.209717927397555 0.217666462369696 0.218379158471097 0.210569989371195 5 5|0 +|/ 16006508 16007694 16006866.5 16004781 16007929 + gene protein_coding_gene TRUE TRUE AT5G39940.1 oxidoreductase similar to putative carbon dioxide concentrating mechanism protein CcmK [Thermosynechococcus elongatus BP-1] (GB:NP_681937.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain HI0933-like protein; (InterPro:IPR004792) 0.671087265593217 3.78893622553566 0.00321177828837688 0.048981247352397 6.23055344065228 7.70957879517773 0.671087265593217 0.257546974532005 AT5G39080_at 9.22071125613304 9.45222299808423 9.88174430251574 10.1890241681642 10.4133008575652 10.0654953039914 9.80029039463898 9.88483297717623 9.6021846315724 9.86548709907672 10.0241454350200 9.91584143573318 9.85835450592666 9.78125906729483 9.4896534485585 10.1669091034451 10.1867092220845 9.9727337284389 9.7431979706401 0.103686243422686 0.101199915627491 0.101705685288984 0.102631449074176 0.0988264450082783 0.101948571561667 0.0987512607364787 0.0968576566571147 0.112266764918946 0.0968576566571147 0.103714656736352 0.0968576566571147 0.0978682601255468 0.107597082670497 0.101411523621928 0.0968576566571147 0.106888128659957 0.0983380164551343 0.0994286948522857 5 5 + 15659739 15660221 15659938 15658886 15660389 + gene protein_coding_gene TRUE TRUE AT5G39080.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39090.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.367685463883665 3.78810189578873 0.00321632240238805 0.0490333003671341 6.2291453203058 19.6941564374882 0.367685463883665 0.0909376742453998 AT5G11410_at 1.57454783689933 2.05358174253399 1.34747196896985 1.36756053303035 2.01327917334571 1.70655851745713 1.35337680432246 1.23809485793394 1.24875820213220 1.75225438511555 2.57118138027404 2.33936894601216 2.07446860833659 2.70857894235244 2.64311006842858 1.48988668828981 2.01609313077718 2.64931422151993 1.81012088376700 0.204939755897114 0.213910241030001 0.224301764776402 0.207095528344366 0.207679740498904 0.214352104973243 0.2127507036869 0.213159775815526 0.209305354353926 0.210913523688778 0.213581573276622 0.212873899976119 0.206691385905218 0.220365952363024 0.223306578400274 0.214322310705108 0.204939755897114 0.217323321533723 0.206253176259272 5 5|0 -|/ 3638469 3639118 3638795.8 3638432 3639884 - gene protein_coding_gene TRUE TRUE AT5G11410.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to H0409D10.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66747.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.380803164511127 3.78667244549725 0.00322412331901023 0.0491349497644266 6.22673265644448 3.53941463193847 0.380803164511127 0.100497615957584 AT5G45590_at 4.29360643453245 4.40535530641661 4.26942901856168 4.56945534459922 5.58829784431509 4.7761290470118 4.84499907043158 5.38410102563245 4.01531920968172 4.12874489553837 5.00441994778597 5.9343963969701 4.96945759982002 5.14063863116698 5.13740775593562 4.52612606143040 4.19886557737607 5.01936656622337 3.97271347772993 0.236588664907515 0.237115217263721 0.246041195097413 0.244296679679464 0.242629447020572 0.236045884706856 0.228999431356833 0.237412745515386 0.238368268644729 0.242203229888391 0.233355343280599 0.232371894049029 0.228999431356833 0.228999431356833 0.235046918759029 0.229528322959211 0.248676312187838 0.229281174667432 0.23991859221691 5 5|0 -|/ 18501912 18503419 18502912.8 18501677 18503511 - gene protein_coding_gene TRUE TRUE AT5G45590.1 structural constituent of ribosome similar to Os10g0579500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065508.1); similar to unknown protein [Oryza sativa] (GB:AAG46165.1); contains InterPro domain Ribosomal protein L35; (InterPro:IPR001706) 0.510610655236949 3.78346496933933 0.00324169901046658 0.0493854408642178 6.22131833842884 9.28155197547356 0.510610655236949 0.177560551739873 AT5G27290_at 8.5471932233213 8.35852822113744 8.97034724494913 8.71655630077853 9.56485276682051 9.0504290430325 9.52971777981249 9.47274960322268 9.5101263695949 10.0000608620279 10.6318382966051 10.5914742531571 10.3039243755001 10.4848943330354 10.4778271285131 10.7926964404021 10.2779166317412 10.3333087704330 9.92410048425246 0.117714871308164 0.123732807921769 0.123446062669208 0.127554470062461 0.117271308183301 0.129979375911904 0.116097123335768 0.116097123335768 0.125501910081013 0.116097123335768 0.119558863901087 0.119425807752439 0.116220824899026 0.128014028769867 0.116097123335768 0.116597793373571 0.118108064971917 0.116227802712746 0.119760356677344 5 0|5 /|- 9618670 9619306 9619030.667 9618395 9620536 - gene protein_coding_gene TRUE TRUE AT5G27290.1|AT5G27290.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54680.1); similar to stress regulated protein [Lycopersicon esculentum] (GB:AAW65813.1) 0.386902461034992 3.78299609850935 0.00324427655749372 0.0494073480504229 6.2205267943052 19.1753789065336 0.386902461034992 0.104963248429524