ID expr.6.4.exp_090507.CEL expr.6.4.exp_150607.CEL expr.6.5.exp_090507.CEL expr.6.5.exp_150607.CEL expr.6.7.exp_1_040507.CEL expr.6.7.exp_150607.CEL expr.7.2.exp_1_040507.CEL expr.7.2.exp_150607.CEL expr.6.4.3_exp160807.CEL expr.6.4.4_exp160807.CEL expr.6.5.11_exp160807.CEL expr.6.5.2_exp160807.CEL expr.6.5.6_exp160807.CEL expr.6.5.8_exp160807.CEL expr.6.7.19_exp160807.CEL expr.6.7.20_exp160807.CEL expr.6.7.21_exp160807.CEL expr.6.7.22_exp160807.CEL expr.7.2.1_exp160807.CEL se.expr.6.4.exp_090507.CEL se.expr.6.4.exp_150607.CEL se.expr.6.5.exp_090507.CEL se.expr.6.5.exp_150607.CEL se.expr.6.7.exp_1_040507.CEL se.expr.6.7.exp_150607.CEL se.expr.7.2.exp_1_040507.CEL se.expr.7.2.exp_150607.CEL se.expr.6.4.3_exp160807.CEL se.expr.6.4.4_exp160807.CEL se.expr.6.5.11_exp160807.CEL se.expr.6.5.2_exp160807.CEL se.expr.6.5.6_exp160807.CEL se.expr.6.5.8_exp160807.CEL se.expr.6.7.19_exp160807.CEL se.expr.6.7.20_exp160807.CEL se.expr.6.7.21_exp160807.CEL se.expr.6.7.22_exp160807.CEL se.expr.7.2.1_exp160807.CEL Chr ChrList StrandList From.Min From.Max From.Mean start end strand type Note isChr5 isClean IDlist Short.description Currator.summary Description logFC t P.Value adj.P.Val B A M M.se AT5G24470_at 10.7571532265792 10.8836709072374 10.7497195710861 10.6958660080735 11.7220710777589 11.4320229187142 5.18287687902041 5.01199791446558 4.33535175693041 3.10749041503632 7.36364166390188 7.82243771702625 7.42433341542747 8.29731181890888 7.25517514963212 6.45867413434506 7.64667743477548 7.11556724275924 2.98810060819448 0.324507023440168 0.325627787489842 0.324790715410429 0.324366628240032 0.329027873993121 0.327694081493219 0.323258703320552 0.315115446670247 0.342864973621369 0.338106906385165 0.323222812378649 0.31872196745625 0.314068927010782 0.314936354452093 0.316513494786742 0.315583830701753 0.322985943081892 0.331813982193778 0.343187346813134 5 5 - 8356230 8356862 8356634.364 8355954 8358876 - gene protein_coding_gene TRUE TRUE AT5G24470.1 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Identical to Two-component response regulator-like APRR5 (Pseudo-response regulator 5) (APRR5) [Arabidopsis Thaliana] (GB:Q6LA42;GB:Q9FGE3); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to pseudo-response regulator 95 homologue [Lemna paucicostata] (GB:BAE72699.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 2.58672733035128 32.2670396349254 3.01746025926210e-10 7.39277763519214e-07 14.1358815925152 15.0044014372756 2.58672733035128 0.0629297015174308 AT5G62360_at 11.0292364077358 11.1407589789803 10.4285717300907 10.5164332416279 11.8739783777667 11.7544467663919 6.09366406826987 5.47718533359317 5.52507638270376 4.94070747842891 10.3030647577165 10.1976792221581 9.77980143801336 10.2836787202326 9.85148293171796 10.7925883926414 9.19747054670967 9.65482522359098 4.32977635292743 0.193576234331100 0.187991177744669 0.196415454662793 0.187991177744669 0.196485865983776 0.198642133879920 0.233688091768486 0.239347734071791 0.228871328709853 0.249217750914306 0.187991177744669 0.187991177744669 0.193804800401371 0.191440910368760 0.187991177744669 0.192885047498908 0.200204830832159 0.194854778952713 0.222719896290017 5 5 + 25058060 25058510 25058216.455 25057882 25058687 + gene protein_coding_gene TRUE TRUE AT5G62360.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 3.06741188691311 30.1167380169708 5.42238112653684e-10 1.32794113788887e-06 14.0538339628479 17.2589980174492 3.06741188691311 0.111414249112433 AT5G67480_at 8.81876619350765 8.763141102903 9.6232824702716 9.64956235519845 9.8117187350077 9.576647497577 5.07732546687054 5.3147989974435 7.72730227572033 5.08159870824778 10.2928366098068 8.95248953916347 8.79831324781676 9.89700373493947 9.08335681177646 8.92818805961064 8.06960677645495 9.32164625948246 3.66957016752449 0.156252351953723 0.155554814704337 0.160960916969826 0.155554814704337 0.161013790899373 0.164031634606082 0.184804956628814 0.203279698262291 0.192990204020428 0.180602951725731 0.15995786919407 0.155554814704337 0.159647041962378 0.156370925846118 0.162345722728574 0.155554814704337 0.162138800947177 0.155554814704337 0.178749442370136 5 5 - 26948406 26948910 26948585.818 26948165 26950319 - gene protein_coding_gene TRUE TRUE AT5G67480.1|AT5G67480.2 BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator|BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding similar to BT5 (BTB and TAZ domain protein 5), protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT4G37610.1); similar to Zinc finger, TAZ-type; BTB/POZ [Medicago truncatula] (GB:ABE77424.1); contains InterPro domain Zinc finger, TAZ-type; (InterPro:IPR000197); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 2.23180667987141 28.3628791899590 9.02417148800684e-10 2.20911718026407e-06 13.9741941309724 15.6597822758702 2.23180667987141 0.058797075457741 AT5G59320_at 9.912217136731 9.94743397927033 13.1110722407403 13.1983238306972 13.6779537409228 13.7557170661492 13.0316864217597 12.9102712849222 9.19573411246882 11.2413216582939 11.6748265577845 8.38382407317743 11.5649607886042 11.8202393732929 13.1234011019407 12.6361819266668 13.8807231143630 14.1829030812639 7.65787804854878 0.117841895520754 0.115313163354335 0.113731383330438 0.111949228185197 0.117354533389022 0.119008252766400 0.112811485936201 0.111287923181893 0.127574651589184 0.110291390230067 0.109223875736701 0.114527848118226 0.110904739290113 0.110642069055974 0.109223875736701 0.109223875736701 0.116530846604648 0.110807320310462 0.131855952422072 5 5 + 23946293 23946588 23946432.727 23946197 23946970 + gene protein_coding_gene TRUE TRUE AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding lipid transfer protein 3 Identical to Nonspecific lipid-transfer protein 3 precursor (LTP 3) (LTP3) [Arabidopsis Thaliana] (GB:Q9LLR7;GB:Q9FIE6); similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.85762599102029 26.2917965326475 1.71633645652427e-09 4.19815897265837e-06 13.8614930443394 23.2047646836027 1.85762599102029 0.0297944833639835 AT5G54960_at 9.89666256380962 10.033007818192 11.1758310480982 11.2164376518302 11.486638778104 11.2958953590993 8.16063314567683 8.08121456340308 7.3066789145754 7.64019939068447 9.93099867150212 9.39482090273112 9.5753693763478 9.85658717339092 9.31056239958707 9.97351358551429 10.1917483134485 9.8099587792837 6.17338420041754 0.149552422941730 0.149642069475308 0.158878893558211 0.154505710550093 0.155340684506766 0.156327948946348 0.155446066463334 0.159394703231749 0.175615850263210 0.169094380672421 0.149552422941730 0.149552422941730 0.152267433403102 0.149552422941730 0.152466260820842 0.150483116698333 0.153658652469283 0.158962989288171 0.184339771513676 5 5 - 22328115 22328628 22328427.636 22327913 22329987 - gene protein_coding_gene TRUE TRUE AT5G54960.1 PDC2 (PYRUVATE DECARBOXYLASE-2); pyruvate decarboxylase pyruvate decarboxylase-2 similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G33070.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAG13131.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain Pyruvate decarboxylase/indolepyruvate decarboxylase; (InterPro:IPR012110); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766) 1.74335059582733 23.5987021015198 4.28237072617971e-09 1.04661140547832e-05 13.6750820362232 18.5660563170857 1.74335059582733 0.0434119921890824 AT5G57785_at 5.78309183901304 5.98587828104411 8.21100420101432 8.63304994696253 9.08817959925966 8.8033820017665 4.8938388130743 5.23324595478579 3.71653649238008 5.23199772912976 7.6900274253351 7.76278833701045 8.48846890492238 8.2853281719007 7.43205799952313 7.92700359312568 9.02077060054065 8.16408407813675 4.84203064753006 0.312625949277707 0.30658249858449 0.305667999129311 0.306955462958348 0.311048334229248 0.309891758555229 0.321868901676277 0.317933283363671 0.361000489817476 0.309638510479166 0.305836693778489 0.301805336187630 0.303182605192305 0.302784864244465 0.301805336187630 0.304206431822645 0.308470791682448 0.304581728849336 0.316217845452296 5 5 - 23426354 23426526 23426435.818 23426122 23426648 - gene protein_coding_gene TRUE TRUE AT5G57785.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 2.31118851996919 22.6757071371077 5.99793532583326e-09 1.4640960130359e-05 13.59790449182 13.4255443771943 2.31118851996919 0.111556764202032 AT5G35735_at 9.96987327525456 10.0459283197204 11.1282192488574 10.9630265379673 10.9279306336640 10.5958401783033 5.68485797023033 6.13535574026724 6.4119972795028 6.03437580836003 9.35959726224227 8.84712810207425 8.70689121391081 9.17294189091477 8.60509513411762 8.05788407291506 7.70796928559468 8.82625864711133 4.23174438010977 0.257228563411439 0.25258540357583 0.255284768297912 0.256184993250206 0.255494175896406 0.261473350198823 0.259279596422597 0.270467684529363 0.289831100618216 0.271909328156344 0.252202505472181 0.252202505472181 0.256272907627474 0.25876124217784 0.261422123555308 0.252202505472181 0.261569941721001 0.268080081648086 0.268801521884524 5 5 - 13918182 13918637 13918428.545 13917982 13920227 - gene protein_coding_gene TRUE TRUE AT5G35735.1 auxin-responsive family protein similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G47530.1); similar to putative membrane protein [Solanum tuberosum] (GB:CAC37356.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 2.14910620008328 22.142680036379 7.33087688792111e-09 1.78873396065275e-05 13.5496112679295 16.5413005832502 2.14910620008328 0.101838709001291 AT5G22460_at 3.16297881075178 3.10412583016740 4.42732329350259 4.67910019313942 4.09502715469487 4.33184404633853 3.461932789952 3.59007012838623 3.25013583537813 3.07589102771596 8.39590954360742 8.36998269402253 6.23890119724129 7.45288225277613 9.06709181568305 7.77444965086288 6.01722109718409 8.31884795028983 3.93541971911254 0.260078856732366 0.254230121934947 0.259793991668059 0.253880941651677 0.256753103359555 0.262079801478584 0.256556118107785 0.257240961366084 0.274636931281839 0.257301899834649 0.257734608490454 0.259239363616250 0.262587465244379 0.263696801243613 0.254581029793563 0.256857845691893 0.260888279491860 0.255687336388209 0.258868462706733 5 5|0 -|/ 7443705 7444414 7444020 7443511 7445549 - gene protein_coding_gene TRUE TRUE AT5G22460.1|AT5G22460.2 esterase/lipase/thioesterase family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G74280.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G36290.1); similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74300.1); similar to Os12g0152100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066173.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95828.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 1.78533844020699 22.0998685502141 7.4515038010153e-09 1.81742177706763e-05 13.5456055949205 9.41899676550524 1.78533844020699 0.06460218869459 AT5G63760_at 5.16270796851606 5.14347931339513 7.08073397718436 6.9877392079117 7.10116636058184 7.25140776388167 3.74488103323653 3.35094405539019 2.37137607309513 2.54779864118751 5.6136999720668 4.76015411089605 6.10647181691627 6.06571505522441 4.85048064219337 5.63176529189358 6.34640966411189 4.8676222234398 3.55177263136551 0.238729561471704 0.233282513203926 0.245571726904478 0.239978518528211 0.234884581885 0.236715113633757 0.239505277856214 0.234031175133135 0.250937740975128 0.246788092635929 0.233282513203926 0.235151983129206 0.239792292441577 0.241687313497024 0.242146955622191 0.233282513203926 0.241447199544064 0.238880301434758 0.239057411623604 5 5 - 25533118 25533869 25533558.2 25533104 25535059 - gene protein_coding_gene TRUE TRUE AT5G63760.1|AT5G63760.2 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to Zinc finger, RING-type; Zinc finger, RanBP2-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85988.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.80969085709881 21.3432483883425 9.99437410716738e-09 2.43662840732741e-05 13.4714926907348 9.9048519411666 1.80969085709881 0.0747901715113814 AT5G51570_at 8.31972082165833 8.33126605139633 8.87043894217112 8.88163656722587 9.13464218537122 8.87089877984937 4.39739258762318 4.47481837414308 3.74535951423889 3.92720875655377 6.60632219216201 6.34710136147425 6.02141758092585 6.83365889798142 6.08774029185188 5.49078868050739 6.91796096867216 5.72990198672026 3.52605087480862 0.279352538859832 0.282718234906771 0.276673493668713 0.284721707357399 0.277725518843523 0.285985933125959 0.277236873143798 0.276638674067916 0.285413030669408 0.289197663591571 0.276443863003735 0.285079195075012 0.280332481311839 0.280065542864199 0.276443863003735 0.277210314558082 0.285643048399074 0.276443863003735 0.290533641611411 5 5|0 +|/ 20967279 20968433 20968007.3 20966630 20968723 + gene protein_coding_gene TRUE TRUE AT5G51570.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to Os06g0136000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056723.1); similar to hypersensitive-induced reaction protein 4 [Hordeum vulgare subsp. vulgare] (GB:AAN17454.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 1.49509446092357 19.9121836886528 1.79202143964878e-08 4.36357220554478e-05 13.3121142588032 12.6537190604651 1.49509446092357 0.0476494681889597 AT5G24160_at 7.70755603535134 8.14205120434125 9.568911585694 9.5798097715129 10.4036334102802 10.2460109177864 7.60742237690595 7.726283255709 4.63569175184284 5.62715513029529 8.26200352236031 7.54676442194498 8.76468337220823 8.72542902699662 7.70053824927642 7.63010958957712 8.77444713538535 8.71303010732791 4.86298099735749 0.213438456463959 0.210439393778670 0.207429889045735 0.206897727247149 0.208776173173958 0.207889229966524 0.208555954200896 0.213620834582521 0.232061725541192 0.233135736077156 0.207341484690576 0.209643043079766 0.208467151929125 0.206746611678731 0.211229084762551 0.207182630593928 0.208119918854239 0.204488258848249 0.225500628719421 5 5|0 -|/ 8183315 8184020 8183683.556 8183078 8186643 - gene protein_coding_gene TRUE TRUE AT5G24160.1 squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) Identical to Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene epoxidase 1,2) (SE 1,2) (SQP1,2) [Arabidopsis Thaliana] (GB:O65402); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 1.73822912791325 19.7270739324646 1.93829363470223e-08 4.71780670686524e-05 13.2894349766458 15.5259939720142 1.73822912791325 0.082610282685485 AT5G22630_at 5.41451950115192 5.4845045456432 8.93264710957 8.8736907367921 7.4617602271647 7.72908656290659 5.40212771268017 5.64571901790254 5.5139705154249 4.74183839233915 7.55281815096734 7.51383430980604 7.59128515734147 8.0773447940588 7.11520378417963 7.60698109374116 8.5407386849831 7.4915940247024 5.52709910357862 0.204260364266095 0.198647095689231 0.204974543358744 0.207749725002614 0.197725317435069 0.196825615232292 0.205888491746653 0.199724095962751 0.205905521479405 0.208421100343045 0.193365481588467 0.201404150239344 0.194728186384785 0.197646658136128 0.201362799987649 0.199837689782527 0.199044925341510 0.202867626836073 0.200793662635989 5 5 + 7525350 7525884 7525596.091 7524345 7526163 + gene protein_coding_gene TRUE TRUE AT5G22630.1 prephenate dehydratase family protein similar to prephenate dehydratase family protein [Arabidopsis thaliana] (TAIR:AT3G44720.1); similar to prephenate dehydratase [Ipomoea trifida] (GB:AAS79603.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) 1.54949600854112 19.1842438455476 2.4498997568235e-08 5.95815620859476e-05 13.2198904475039 13.3416040952698 1.54949600854112 0.0645597938728607 AT5G17650_at 7.68442240836174 7.85036969955783 10.4989207929463 10.4233563874110 9.95981380066942 9.76815220373574 9.09777835474515 8.91829018008503 5.79591356531642 7.32909037067482 8.62266501130531 8.01556466050265 9.5505761978719 9.3082379537367 8.69466910076253 9.68011501076937 10.3175086447784 9.22955312381846 5.87156248143254 0.174543747727051 0.175731412332562 0.176400302958457 0.175230779828688 0.176568918071835 0.180450125348983 0.176546184351903 0.176176581027500 0.241690069034687 0.190135092480175 0.177699240731549 0.182361096883543 0.172373355086099 0.172373355086099 0.172373355086099 0.174897304839482 0.178560281973317 0.177578109466880 0.215494669944684 5 5|0 -|/ 5817104 5817710 5817447.6 5816700 5818349 - gene protein_coding_gene TRUE TRUE AT5G17650.1 glycine/proline-rich protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G45350.2); similar to Unknown (protein for MGC:12025) [Mus musculus] (GB:AAH05782.1) 1.47033951813064 18.9715402827351 2.69007699082688e-08 6.53957716470015e-05 13.1913428675973 17.0299129878146 1.47033951813064 0.0553230224770817 AT5G09440_at 7.64326034916878 8.36068901016098 10.7611568770137 10.9824141882550 11.0678153619523 11.1717051403661 6.29263555308362 6.69585530231149 3.86742032095519 5.28927441264743 8.04049624971101 6.06409902228196 8.54867411478178 8.24038427860308 5.27223283558273 7.66502498670789 7.99009235131094 7.8993571615968 4.89892348167961 0.283001028646020 0.281816697852954 0.302976717026858 0.304783847226832 0.304252726057668 0.301359536375567 0.281629627216584 0.278558018405031 0.323811064634257 0.294793697684265 0.278558018405031 0.286549550984244 0.287825321667669 0.282510455551085 0.299366503544367 0.278558018405031 0.293921766260824 0.282165231305650 0.314613563412934 5 5 + 2938649 2939154 2938844 2938348 2939462 + gene protein_coding_gene TRUE TRUE AT5G09440.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G64260.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 2.2942115099993 18.8050581676145 2.89641309545902e-08 7.03828382196542e-05 13.1684643432184 15.1970670712054 2.2942115099993 0.148569009608784 AT5G26570_at 9.95845837380043 10.0323581298725 10.3115654017271 10.3452410931300 11.0035239588910 10.6189236050087 8.52750103972108 8.55978129577128 5.34902521703883 7.40445014538367 9.65086120051 9.58183001752777 9.64914340987083 9.654707341547 10.0170831996566 9.34307391758564 9.75181142758938 9.87102074312328 6.65301531053544 0.113592254337421 0.116043309436999 0.124109617137058 0.119075723483597 0.117054894806481 0.125077699453892 0.122601826013268 0.120399919463501 0.172137934996789 0.138260366381718 0.117975100555407 0.113592254337421 0.11801087993289 0.117021700911096 0.117500057733993 0.113592254337421 0.124548671684754 0.116921546954993 0.133782916859209 5 5 + 9266983 9267504 9267175.909 9261583 9267732 + gene protein_coding_gene TRUE TRUE AT5G26570.1 PWD (PHOSPHOGLUCAN WATER DIKINASE); catalytic chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position. Identical to Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) (GWD3) [Arabidopsis Thaliana] (GB:Q6ZY51;GB:O81504;GB:O81505;GB:Q5XMK9;GB:Q84TI8); similar to SEX1 (STARCH EXCESS 1) [Arabidopsis thaliana] (TAIR:AT1G10760.1); similar to Os12g0297500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066613.1); similar to chloroplast alpha-glucan water dikinase isoform 3, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21981.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) 1.48624804253761 18.0863839400629 4.01426523407738e-08 9.74663598833987e-05 13.0639932325984 17.9990549279881 1.48624804253761 0.0682534863020187 AT5G53710_at 2.43929511253510 2.79659903003748 5.8156780386138 6.00752522599812 8.10604656910958 7.91586616787573 4.62797617922568 4.93316237214644 3.8165917508116 3.61248642223553 5.67159059464662 3.65453648499011 4.47918300119968 6.17439045975652 4.5866831164117 3.66111977696766 5.52940038535202 5.92405305816299 2.32099081558154 0.251797658070169 0.251965784543517 0.255154085728676 0.252160433504404 0.249378271751852 0.248252088453178 0.249287831792591 0.253114388430654 0.246805184948295 0.246805184948295 0.248658997527701 0.254712597872648 0.246805184948295 0.24840817338539 0.246805184948295 0.247130946636746 0.264603622901055 0.25681845308508 0.255228168146838 5 5 - 21822640 21822935 21822782.455 21822485 21823020 - gene protein_coding_gene TRUE TRUE AT5G53710.1 unknown protein 1.60129056050894 17.1818744680523 6.16368824838303e-08 0.000149531076905772 12.9179983590568 9.43533988989047 1.60129056050894 0.0937979633769476 AT5G57220_at 4.38005740370082 5.16984743993366 8.5043623921378 8.61057275536894 9.05939123202631 8.54797272979125 1.99891150972582 1.65529561979154 3.78271914437781 2.69631792557470 3.59057115555419 7.72698061372539 2.50138110418810 4.77316137581336 4.73985817259147 2.50584527427419 3.61020980177412 3.39707593859581 2.52192771198513 0.275243831072700 0.273189748277187 0.285506980375604 0.281677245401644 0.279787249881148 0.278314478394705 0.280847297292816 0.276236468793538 0.269514023679598 0.28187552966426 0.269514023679598 0.280256299319303 0.280135275170299 0.271513902198221 0.283834165182410 0.274245288547784 0.286849656566895 0.277867251124897 0.275572342681567 5 5 + 23206310 23206876 23206609 23205066 23207083 + gene protein_coding_gene TRUE TRUE AT5G57220.1 CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2); oxygen binding member of CYP81F similar to CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37430.1); similar to CYP81F3 (cytochrome P450, family 81, subfamily F, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37400.1); similar to CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37410.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 2.34870001006223 17.1450718180145 6.27500374570334e-08 0.000152168840833306 12.9116839390750 9.54377989708141 2.34870001006223 0.174319373061222 AT5G13320_at 6.62071009585105 7.1747137218336 10.338313859626 10.4747974598435 7.80290591520339 7.28942175916854 2.83104345330801 3.0486337340592 3.38870005764116 3.67800632480888 5.24718891161337 5.14048890789158 5.90689869534318 5.25353499518171 4.38843188848383 7.0045579382528 5.34507440862733 5.31954096147769 3.51351648590193 0.239067303797603 0.241367932633696 0.237963633482136 0.237963633482136 0.237963633482136 0.252685273806902 0.237963633482136 0.248881142957817 0.243790842506091 0.242316988609531 0.237963633482136 0.237963633482136 0.237963633482136 0.245287621510521 0.238464688253064 0.239081550998482 0.241720982682438 0.237963633482136 0.239029439334757 5 5|0 +|/ 4270208 4270799 4270536.8 4267513 4271054 + gene protein_coding_gene TRUE TRUE AT5G13320.1 PBS3 (AVRPPHB SUSCEPTIBLE 3) signaling gene in disease-resistance involved in restricting the spread of both virulent and avirulent pathogens similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48660.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G51470.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 1.98611114612494 17.1071103924602 6.39217522735794e-08 0.000154946327511156 12.9051383813887 11.4362952720998 1.98611114612494 0.138071086238244 AT5G61380_at 8.64572276461965 8.37842612065829 9.16142787897321 8.85216664725696 9.53369511491726 9.55874040230773 3.89550411419174 3.78993284388393 4.44367044825854 4.1502421772951 5.41516423773872 6.07941976754599 5.97596587275917 6.38453988008643 5.85795732381111 6.10408453523871 6.4233389488778 6.13554797396482 4.04105569200199 0.246234824554589 0.241602186652022 0.245894113279670 0.243834985123397 0.245474782194289 0.246862879932185 0.240913627257521 0.255580087188827 0.245426162033377 0.265209452011461 0.239900539702332 0.238575878144012 0.238575878144012 0.238575878144012 0.240859474526820 0.23919705621116 0.242348909297312 0.240046447428621 0.253257134762243 5 5 + 24694841 24695357 24695054.909 24692313 24695776 + gene protein_coding_gene TRUE TRUE AT5G61380.1 TOC1 (TIMING OF CAB1 1); transcription regulator pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Two-component response regulator-like APRR1 (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) (APRR1) [Arabidopsis Thaliana] (GB:Q9LKL2;GB:Q9M4B7); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to timing of CAB expression 1 protein [Castanea sativa] (GB:AAU20772.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 1.4210595007835 16.8902843185379 7.10996358814829e-08 0.000172274417740833 12.8671124770036 12.8562811975285 1.4210595007835 0.07318853179925 AT5G59310_at 3.27246855739377 3.28281730896273 7.27435657177273 7.832951643397 11.1071467952284 11.1500115522863 7.2390106194164 7.15448767030933 1.91276308237684 8.08430296932905 4.00995697560340 2.30668680106403 3.65972460433983 3.93867640657133 6.02884583489397 6.19688066641352 7.91532831422464 8.30620876722767 2.44768260485377 0.396754674969860 0.392887778964479 0.39589049567445 0.392887778964479 0.407352073709049 0.40882975130281 0.392887778964479 0.395234645730447 0.41415881331818 0.396695353482993 0.40001674535796 0.402568931660751 0.395273753755638 0.405638781226554 0.392887778964479 0.392887778964479 0.402569627076321 0.392887778964479 0.412563555564644 5 5 - 23942735 23942958 23942846.182 23942311 23943078 - gene protein_coding_gene TRUE TRUE AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Identical to Nonspecific lipid-transfer protein 4 precursor (LTP 4) (LTP4) [Arabidopsis Thaliana] (GB:Q9LLR6;GB:Q9FIE7); similar to LTP3 (LIPID TRANSFER PROTEIN 3), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59320.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.5956554164681 16.7566162223213 7.59698067618508e-08 0.000183998871977203 12.8431164575723 12.0109253890853 1.5956554164681 0.0980652189286256 AT5G56870_at 9.41954446546259 9.62695606764894 10.39169661833 10.1242320692697 11.2155550265478 11.0934615312203 6.56979439169407 6.43435811437699 7.83147532725276 6.67902276519253 8.13541486298182 8.78667013772668 8.78040421671882 9.00359283257916 8.06160487330471 9.28548806586169 9.75750342776879 8.5522297867954 6.88981535773429 0.200166347945583 0.203486609483932 0.204308921088049 0.205305005142728 0.209592685239974 0.204595415748283 0.210493352354638 0.208331771877327 0.220518108018382 0.232565636491056 0.218884216202466 0.200166347945583 0.200166347945583 0.210350636060396 0.206682837770191 0.200166347945583 0.202577928776437 0.205374205432408 0.227660005824925 5 5|0 +|/ 23024811 23025595 23025284.556 23021422 23025875 + gene protein_coding_gene TRUE TRUE AT5G56870.1 beta-galactosidase, putative / lactase, putative similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT3G52840.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to pear beta-galactosidase1 [Pyrus communis] (GB:BAE72073.1); similar to beta-galactosidase [Pyrus communis] (GB:CAH18936.1); similar to beta-galactosidase precursor [Carica papaya] (GB:AAC77377.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 1.35760078120646 16.6550070071154 7.99207096196622e-08 0.000193488037989202 12.8245857993914 17.3238504566656 1.35760078120646 0.0665319597819912 AT5G27420_at 7.35914515630858 7.54874031840167 9.4899923440599 9.5614803939793 8.19704432076656 8.40771216140252 2.36758184393533 2.49190943110547 3.84051350500446 2.75330217673605 2.77019695754335 4.44625641404465 3.02689176096423 3.51327349762894 3.44097354062889 3.02044573626021 3.72380784138509 3.93540452771984 2.52345669922490 0.306628231945181 0.313066902261858 0.301226645559065 0.301435023797153 0.306387098489277 0.305509347743301 0.298325444392341 0.297476528294918 0.297507854438442 0.290731960283122 0.285367968534180 0.293793799476645 0.291647258565252 0.302770021894051 0.288874555262871 0.285179844829985 0.286916254316823 0.292814960178719 0.29437704461776 5 5 + 9684633 9685196 9684848.455 9684075 9685564 + gene protein_coding_gene TRUE TRUE AT5G27420.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5H precursor (ATL5H) [Arabidopsis Thaliana] (GB:Q8LGA5); similar to ATL6 (Arabidopsis T?xicos en Levadura 6), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G05200.1); similar to RING/C3HC4/PHD zinc finger-like protein [Cucumis melo] (GB:AAO45753.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.26913086033332 16.4002821510011 9.08699939603923e-08 0.000219905385384149 12.7770002552984 10.1898242853334 1.26913086033332 0.0549690793758303 AT5G22300_at 9.34957048533333 9.36297418046011 10.5668201306574 10.5744068505230 10.3963967966022 10.2554986298876 8.92806366610811 9.00066127526023 5.71230925704669 6.80549043968026 7.95969817152237 8.08791903551063 9.89897037735933 9.35374401276612 7.860695922595 10.7121338912690 10.3583916056343 9.199592459684 7.3586369424425 0.206997645942175 0.204522413565861 0.210557871901223 0.209629807353784 0.207192390831778 0.20884716362883 0.200174731999229 0.200174731999229 0.232541754720638 0.221526333844589 0.217287827586417 0.213220996697475 0.20148712869178 0.207536094667069 0.242878889145961 0.201277151489099 0.206513836705849 0.212235973595940 0.233563813767588 5 5 + 7380988 7381718 7381362.909 7379202 7381928 + gene protein_coding_gene TRUE TRUE AT5G22300.1 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. Identical to Nitrilase 4 (EC 3.5.5.1) (NIT4) [Arabidopsis Thaliana] (GB:P46011); similar to NIT3 (NITRILASE 3) [Arabidopsis thaliana] (TAIR:AT3G44320.1); similar to NIT2 (NITRILASE 2) [Arabidopsis thaliana] (TAIR:AT3G44300.1); similar to Nitrilase 4 (GB:Q42965); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Nitrilase/cyanide hydratase; (InterPro:IPR000132) 1.12661056735944 16.0419111226046 1.09212130379057e-07 0.000263856506995801 12.7072027199893 17.7064850339869 1.12661056735944 0.0275586080677274 AT5G20230_at 10.7283623967267 10.8065776264062 12.0766328380819 12.1030727581593 11.4467012668742 11.2815054482789 5.03743928508946 4.22324711747397 8.14039950239077 5.573954802423 8.50142326985686 8.95206131058106 5.34698578597075 8.48164634923527 9.04007157279254 5.63299568818702 6.32903822393651 7.57362005819908 4.46718563286952 0.258035975242844 0.256204477668362 0.257474242527532 0.257713790547683 0.258252369910014 0.258192441834489 0.260753692258913 0.266320381758915 0.263544381214553 0.270003329114724 0.257345303796598 0.253572478899284 0.266125131099556 0.258722500905450 0.253572478899284 0.266055614534911 0.262048570020659 0.258884344308357 0.272796079395428 5 5 + 6826720 6827343 6827061.364 6826508 6827601 + gene protein_coding_gene TRUE TRUE AT5G20230.1 ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding Al-stress-induced gene Identical to Blue copper protein precursor (Blue copper-binding protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) (BCB) [Arabidopsis Thaliana] (GB:Q07488;GB:O82664); similar to UCC3 (UCLACYANIN 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT3G60280.1); similar to Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form (GB:1X9R); similar to Umecyanin (UMC) (GB:P42849); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 1.84661869163972 15.4291147240992 1.50932905737102e-07 0.000364352034449364 12.5795776113544 16.4843141395893 1.84661869163972 0.144478905718428 AT5G65640_at 3.19745861721341 3.28045899004436 3.80463341798595 4.37716125047504 5.74311087201052 5.40971064057552 4.30629180926674 4.40190636546012 2.85288764025046 3.35879969445065 6.35665587546851 7.34183832310745 6.75609279842725 6.51201858657002 7.6967732849328 7.46120244365963 7.02527854741182 7.58513113043024 3.22326987153951 0.30965320969564 0.294015113368413 0.292618021920075 0.289417177051080 0.288617913032738 0.304240075321654 0.288617913032738 0.295234050301217 0.306234470662496 0.29301198061347 0.291673041861889 0.294053362061503 0.29420265756977 0.291606160639186 0.30139107754284 0.291427659312723 0.3027310050365 0.297193968915712 0.288617913032738 5 5|0 +|/ 26254881 26255910 26255494.7 26254285 26256310 + gene protein_coding_gene TRUE TRUE AT5G65640.1|AT5G65640.2 BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor|BHLH093 (BETA HLH PROTEIN 93) similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to Os03g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048889.1); similar to Putative bHLH transcription protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05491.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.60739054657393 15.3680576044624 1.55980364164242e-07 0.000376380618728315 12.5662549033980 9.4335212999612 1.60739054657393 0.116728550662039 AT5G36910_at 3.44175602536199 3.87322811167426 6.12455576132149 6.49031844182265 5.29044825193707 5.80958553471287 6.78677738025668 6.80158851194498 4.76927871610611 6.40021540010964 10.9651250580186 10.8845535736828 11.1766010076890 11.1125545432611 10.2502998737494 10.9237901349442 10.4374910654165 11.054603912252 7.15998931049779 0.295294688552079 0.291284114377128 0.273958642599469 0.271116289549594 0.268253066452824 0.284321953855134 0.273461360243891 0.269942210909348 0.269331546459104 0.274116267118777 0.270900536477243 0.271682956070595 0.26889497116582 0.272674130678009 0.268253066452824 0.270640729950675 0.271064141738393 0.271115476290573 0.268732121242192 5 5|0 -|/ 14579288 14579841 14579581.8 14579047 14579980 - gene protein_coding_gene TRUE TRUE AT5G36910.1 THI2.2 (THIONIN 2.2); toxin receptor binding Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Identical to Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic protein] (THI2.2) [Arabidopsis Thaliana] (GB:Q42597;GB:Q8LEF0;GB:Q9FIW2); similar to thionin, putative [Arabidopsis thaliana] (TAIR:AT1G66100.1); similar to thionin (GB:AAC41679.1); contains InterPro domain Thionin; (InterPro:IPR001010) 1.69087191504703 14.9317839328632 1.98025695863638e-07 0.000476845875639641 12.4676509713595 14.0575098548946 1.69087191504703 0.132889011868944 AT5G47220_at 8.36913095180406 8.74640653784102 10.5947908158364 10.7258372454160 9.69550212761319 8.88289975178616 4.40671400025203 4.80794916073169 4.79952778106345 3.45300144244685 6.63604466554067 6.60958823218586 6.61001137027965 7.84139165947499 5.78426139143056 8.34704048079499 6.84142896894716 5.77629698211162 4.05504597053266 0.242218681986054 0.242218681986054 0.242218681986054 0.242218681986054 0.244264466715452 0.2557442270705 0.248421498109959 0.244263851450137 0.253285768266409 0.247401046294071 0.250113593801295 0.244195367761328 0.242218681986054 0.242218681986054 0.243692147744547 0.242218681986054 0.248359761111492 0.242328146047442 0.254861858171892 5 5 - 19189306 19189790 19189612.636 19189089 19190050 - gene protein_coding_gene TRUE TRUE AT5G47220.1 ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2); DNA binding / transcription factor/ transcriptional activator Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. Identical to Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) (ERF2) [Arabidopsis Thaliana] (GB:O80338;GB:Q8LBU9); similar to ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G17500.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD65036.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 2.00913684650349 14.8548491963092 2.06677363400804e-07 0.000497472413705735 12.4496213889716 13.7327953406734 2.00913684650349 0.171387236387661 AT5G44210_at 3.94214879290379 4.61494965672607 5.09343993167199 5.7820523634843 6.45303109490365 6.61183310397831 2.60689658984227 2.63196218465802 4.05296136014618 3.08770904441914 6.97033885178084 6.15895617957165 7.16333074856903 7.0856788723128 6.1636672666504 6.26706628584445 6.58180396798146 6.80723330858482 3.17494307139309 0.263144784097052 0.255077008429189 0.257336559569127 0.252762217031470 0.251023929519311 0.264963746851314 0.270643357708188 0.265468123511613 0.255066444220669 0.266659801088609 0.253820112705456 0.252380893704409 0.25017342571413 0.259891258359453 0.251195865822447 0.255519942080342 0.263068157402521 0.259353513849703 0.256475834058922 5 5 + 17824084 17824530 17824305 17823699 17824761 + gene protein_coding_gene TRUE TRUE AT5G44210.1 ATERF-9/ATERF9/ERF9 (ERF domain protein 9); DNA binding / transcription factor/ transcriptional repressor encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Identical to Ethylene-responsive transcription factor 9 (Ethylene-responsive element-binding factor 9) (EREBP-9) (AtERF9) (ERF9) [Arabidopsis Thaliana] (GB:Q9FE67); similar to ATERF10/ERF10 (ERF domain protein 10), DNA binding / transcription factor/ transcriptional repressor [Arabidopsis thaliana] (TAIR:AT1G03800.1); similar to ethylene-responsive element binding protein ERF4 [Gossypium hirsutum] (GB:AAX07461.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.96299245942906 14.6722700167376 2.28942970677157e-07 0.000550378901507885 12.4060329542324 9.76118784501175 1.96299245942906 0.168911852365963 AT5G17450_at 5.834757463342 5.39910185346895 8.90138196703642 8.85787082432143 8.72833741233258 8.14031251665047 6.03347750459152 5.48727871252031 4.47935985192506 5.38994027586083 8.5268714378027 7.75779954513825 7.52061226589141 7.74386702719871 7.05723994506703 7.88270539155247 8.30693628781725 8.47525827553797 5.29882454176393 0.233191275022244 0.226090104246531 0.209892020389060 0.214126154268245 0.217585724245486 0.208688432026193 0.219060623296749 0.218753214016869 0.239362149248934 0.224756873441801 0.211413390739106 0.211837310530235 0.210054723711318 0.216615255566201 0.211499472960328 0.208688432026193 0.214156155896384 0.208688432026193 0.215428778729608 5 5|0 +|/ 5755400 5756702 5756473.778 5755324 5756890 + gene protein_coding_gene TRUE TRUE AT5G17450.1|AT5G17450.2 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84676.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to farnesylated protein 3 [Hordeum vulgare subsp. vulgare] (GB:CAD70173.1); similar to Os01g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043154.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.87056084720229 14.6671600818335 2.29603400333261e-07 0.000551736971000825 12.4047965537108 13.6552911960416 1.87056084720229 0.158209771628662 AT5G11970_at 6.58373443228228 6.44924918611908 7.924425267513 7.98916281081492 7.86719204193484 7.7228432840694 4.82573489475536 5.41910457817002 5.50356221892819 4.41046824897427 8.48375781031667 8.02640648562535 7.85008182307277 8.2611263989031 8.04156375713077 8.1880639831451 7.8796453204652 6.93331063190799 5.08437856601799 0.2081861763746 0.202616379676127 0.207461753400402 0.205852760702387 0.201726821911318 0.211890694379409 0.206759068602727 0.211129886838452 0.209614489761123 0.226861362144190 0.206854638404312 0.200858847426008 0.197688507330340 0.199068166128867 0.211849234280076 0.198004211812461 0.201128413394914 0.212019284815830 0.202186437436175 5 5 - 3863297 3863583 3863453.091 3863072 3863756 - gene protein_coding_gene TRUE TRUE AT5G11970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19460.1); similar to hypothetical protein MtrDRAFT_AC152551g19v1 [Medicago truncatula] (GB:ABE86249.1) 1.46291660991669 14.5537994337557 2.44813746459749e-07 0.000588042618996318 12.3771330869778 13.3264129141045 1.46291660991669 0.108790890593999 AT5G53760_at 3.78199438770027 3.74545791445982 5.2619491959148 5.23424459061084 5.62418181330576 5.56948298285336 5.28046067473579 5.31994790323723 2.64182684782528 4.35843946869197 6.8263717162528 6.22966863071954 6.76641024886302 7.15917263766528 5.7284535567932 6.55204522269118 6.66654112728436 6.52143716606508 3.81474070305773 0.257373631227376 0.257650441976531 0.260877077775836 0.257565592776506 0.249937414130586 0.257886134277086 0.266291430285449 0.254871332707627 0.27446109225427 0.254463836712359 0.264514062918366 0.249053209894101 0.251211757402993 0.263165114260732 0.250648816495699 0.249053209894101 0.264339267726494 0.25709265878733 0.264808114178986 5 5|0 +|/ 21842806 21843481 21843120.4 21839712 21843677 + gene protein_coding_gene TRUE TRUE AT5G53760.1|AT5G53760.2 MLO11 (MILDEW RESISTANCE LOCUS O 11); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Identical to MLO-like protein 11 (AtMlo11) (MLO11) [Arabidopsis Thaliana] (GB:Q9FI00); similar to MLO14 (MILDEW RESISTANCE LOCUS O 14), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G26700.1); similar to OSJNBb0017I01.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE05742.1); similar to H0901F07.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86271.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 0.989531962876576 14.4792254760663 2.5543005805025e-07 0.000613287569378651 12.3586870335341 10.0578473719273 0.989531962876576 0.0141160661684871 AT5G47330_at 4.91861219781069 5.54351261576992 8.62945352669034 8.71809648503494 10.3755595868005 10.0067801555004 8.32688102372046 8.25400671214984 8.12450280069442 7.63390877207531 10.4863232007702 8.82320778655228 8.93975431359627 10.1996298387678 9.36488980083679 8.78817452742099 8.91602131369561 9.89965447307969 5.6871678913317 0.195392528375190 0.191734635875177 0.169928714820161 0.160719231919117 0.154926442086707 0.163765694856744 0.164010923706458 0.155173368210786 0.174782698748063 0.171676636156064 0.156971138021725 0.159207626463435 0.155011574155938 0.161500041569582 0.159999258701954 0.157316616610738 0.161154339508909 0.155702039128079 0.185357994998056 5 0|5 /|+ 19225206 19225911 19225647.125 19224326 19226049 + gene protein_coding_gene TRUE TRUE AT5G47330.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47340.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) 1.58898847020579 14.4310562373805 2.62559282745877e-07 0.000630142278590105 12.3466662887677 16.3844794853715 1.58898847020579 0.127129475581508 AT5G05410_at 6.16350518117746 6.71865186864111 7.31891323619107 7.41952269486307 8.51784329550496 8.27121299651266 2.93283488908925 2.98117425062494 2.81346135941823 2.26275908292403 3.32054752852747 3.31737672221561 4.02581713112705 3.75498161249853 3.55966283151767 3.56136154098953 5.0279002715413 4.11729639619684 2.19447425837676 0.250988390320934 0.246012161021285 0.258227668202564 0.244060881600492 0.246930526453483 0.245363409953745 0.243343318969857 0.246642744490924 0.249544022636938 0.247519000308383 0.235383654204249 0.241048992711932 0.238143419213615 0.235383654204249 0.235383654204249 0.235383654204249 0.24564807784018 0.240591899538105 0.241528186109047 5 5 + 1603112 1603611 1603432.909 1602206 1603927 + gene protein_coding_gene TRUE TRUE AT5G05410.1|AT5G05410.2 DREB2A (DRE-BINDING PROTEIN 2A); DNA binding / transcription factor/ transcriptional activator Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. Identical to Dehydration-responsive element-binding protein 2A (DREB2A protein) (DREB2A) [Arabidopsis Thaliana] (GB:O82132); similar to DREB2B (DRE-binding protein 2B), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT3G11020.1); similar to DREB2A-like protein [Arachis hypogaea] (GB:ABC60025.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.4139548027167 14.2022683047912 2.99586372273698e-07 0.000718707707084601 12.2884123026286 9.42004875385878 1.4139548027167 0.106884661105183 AT5G04340_at 5.78600343415066 6.04382885431586 7.93320040592491 7.95360251490368 7.8262870512387 7.96340267657105 3.68298304577242 4.24385284119072 3.14710041231247 3.08876074060948 4.11769963386092 4.11382911030438 4.684181091242 5.30357401248272 2.95928532657032 5.90925258226042 5.07390275967586 4.09772087603873 2.25694954725276 0.228286364301749 0.226165501963103 0.233803815456821 0.243119377322799 0.232506863976603 0.235588766811902 0.229175015824551 0.23006766809835 0.231797426224982 0.238557326002854 0.228919458564688 0.228468216484441 0.226090034421120 0.236766940516133 0.235955471450508 0.231350402817207 0.256995977609079 0.232203297283417 0.239326831304572 5 5 - 1216358 1216862 1216649.091 1216132 1217107 - gene protein_coding_gene TRUE TRUE AT5G04340.1 C2H2; nucleic acid binding / transcription factor/ zinc ion binding putative c2h2 zinc finger transcription factor mRNA, similar to STZ (SALT TOLERANCE ZINC FINGER), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G27730.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52060.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.4059468393448 13.9382745849413 3.4970784597482e-07 0.000837899998955669 12.2187362941674 10.1108288900648 1.4059468393448 0.109485740102634 AT5G27600_at 5.89711059021306 5.64046163427241 7.7704042719195 7.701505824663 6.88853558940574 6.92743759095669 4.71475861928559 4.42404218386081 3.9274687257023 4.64753175575358 6.14783279070402 5.88397036628675 6.58259942123805 6.14356400918523 5.56866344924412 7.21538439050507 7.12029451571946 6.49636151183363 4.18880820490491 0.221393353481108 0.21967028315056 0.216155210198159 0.212236564818085 0.216586184260167 0.211948222259095 0.22750904792929 0.225357648597434 0.230576004624768 0.224450457142166 0.210700222117219 0.213680656934762 0.220285993024073 0.214619299306262 0.217458421583353 0.210699250729876 0.215500162002323 0.215993756328748 0.221592020676520 5 5|0 +|/ 9745823 9746755 9746316.556 9742579 9747008 + gene protein_coding_gene TRUE TRUE AT5G27600.1 LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. similar to LACS6 (LONG-CHAIN ACYL-COA SYNTHETASE 6) [Arabidopsis thaliana] (TAIR:AT3G05970.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96460.2); similar to AMP-binding protein [Brassica napus] (GB:CAA96522.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96461.2); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 1.13552318055049 13.8027835965565 3.79004379927013e-07 0.000907336485545269 12.1819146616135 11.5702503892187 1.13552318055049 0.0684922931902675 AT5G20960_at 5.77497268590445 6.03497600845176 7.15396706754655 7.229278511774 7.50717254366206 7.08858887756936 2.38174000388624 2.63774332087171 2.87678045163857 2.91921481034107 4.42398596448085 4.38867363981729 3.80228461830634 4.71602497667756 4.54919620720895 3.87138320312147 4.65476929559401 4.37134379076812 3.23369989713544 0.249396435793609 0.245306089761075 0.247474592062812 0.247753322881034 0.247156654836615 0.250198704172761 0.246709730590124 0.247408048232401 0.262679060875274 0.245931601081088 0.240566433758968 0.240566433758968 0.249257541782311 0.245847424940821 0.244546903004257 0.244229232567205 0.252248258882802 0.246829412083071 0.240566433758968 5 5|0 +|/ 7121496 7122229 7121870.333 7116740 7122776 + gene protein_coding_gene TRUE TRUE AT5G20960.1|AT5G20960.2 AAO1 (ALDEHYDE OXIDASE 1) Encodes aldehyde oxidase AA01. Identical to Aldehyde oxidase 1 (EC 1.2.3.1) (AO-1) (AtAO-1) (AtAO1) (AAO1) [Arabidopsis Thaliana] (GB:Q7G193;GB:O49155;GB:O64417); similar to AAO3 (ABSCISIC ALDEHYDE OXIDASE 3) [Arabidopsis thaliana] (TAIR:AT2G27150.2); similar to AAO4 (ALDEHYDE OXIDASE 4), aldehyde oxidase [Arabidopsis thaliana] (TAIR:AT1G04580.1); similar to AAO2 (ALDEHYDE OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT3G43600.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93768.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93767.1); similar to aldehyde oxidase [Lycopersicon esculentum] (GB:AAG22607.1); contains InterPro domain CO dehydrogenase flavoprotein, C-terminal; (InterPro:IPR005107); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; (InterPro:IPR000674); contains InterPro domain [2Fe-2S]-binding; (InterPro:IPR002888); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; (InterPro:IPR008274); contains InterPro domain Molybdopterin dehydrogenase, FAD-binding; (InterPro:IPR002346); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 1.30516155247284 13.7816092266890 3.83824772712250e-07 0.000918492681100413 12.1760935258991 9.40460792664252 1.30516155247284 0.0969760298418929 AT5G37740_at 7.5617267744122 7.67321612307873 9.02603574055749 9.19819142088354 9.05728207994768 8.72329350580814 3.0616988758562 3.23016254448083 5.16014694194704 3.6967374180303 5.34800825845649 4.9037966162493 4.49554924077051 5.9416405698161 5.73116636609192 5.52982312669902 5.1893890117493 5.26400940342757 4.73588547195782 0.236735223094504 0.231460217668322 0.239019492489488 0.233858384461018 0.235557454947855 0.243846354135517 0.227919654845587 0.227519319926312 0.246302418895496 0.238213877263609 0.228140952686259 0.228823173457498 0.233318012319092 0.236853546089876 0.237796721745483 0.227133970806493 0.228070681087837 0.227133970806493 0.233048559084742 5 5 + 15009383 15010631 15010151.182 15009235 15010901 + gene protein_coding_gene TRUE TRUE AT5G37740.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G66360.1); similar to C2 [Medicago truncatula] (GB:ABE81436.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.16127414529974 13.7600350036455 3.88806419100433e-07 0.000930024954488237 12.1701437245718 12.1071239338627 1.16127414529974 0.0738267966507263 AT5G25350_at 8.47379523663722 9.00429436638582 8.98949009363501 9.11053526887884 9.92452730073845 9.6689195409445 6.3170856904393 7.04946850609967 7.23767910523725 6.20208432886746 10.4391228388763 10.0713698826629 10.4254573251517 10.2825187731630 10.2572204392350 10.5649856823250 10.7993583304625 10.2254009498301 7.19319236401954 0.164401055107534 0.15919379954508 0.159769466568991 0.160495409299891 0.164282093552328 0.161468292476898 0.187097142148059 0.174128241806184 0.180921511708580 0.195848673593831 0.159588895621901 0.164481543442148 0.15919379954508 0.16799241415085 0.15919379954508 0.171532471382433 0.160271974033951 0.15919379954508 0.195318589596713 5 5 - 8794879 8795397 8795175.727 8794255 8797023 - gene protein_coding_gene TRUE TRUE AT5G25350.1 EBF2 (EIN3-BINDING F BOX PROTEIN 2) Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. similar to EBF1 (EIN3-BINDING F BOX PROTEIN 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G25490.1); similar to EIN3-binding F-box protein 2 [Lycopersicon esculentum] (GB:ABC24972.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE90278.1); similar to EIN3-binding F-box protein 1 [Solanum lycopersicum] (GB:ABB89717.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 1.78023994951189 13.6011272791256 4.27794423135704e-07 0.00102242867129433 12.1257298439009 17.1976801056806 1.78023994951189 0.16397339668894 AT5G64560_at 6.78575291982846 7.05435717430192 8.61174412992886 8.25789241062967 8.81478793254057 8.58822585236612 5.8968002589553 5.35247964175354 4.26256873245323 4.45754086627615 7.42598837992958 7.60406545882653 6.79921033601207 7.18292723869463 6.91258754373994 7.21467749370281 7.67883767123786 6.7029752723548 4.47357837534969 0.251715578446788 0.24488087210309 0.244760372529036 0.250539306253846 0.24661571829031 0.248783295188312 0.247909964200106 0.258382111100833 0.252264802409336 0.259907931926974 0.248739417771453 0.244299774946335 0.25050295790831 0.257610710943618 0.254957575007061 0.245353117149243 0.256122307308865 0.252983768453283 0.265430638048799 5 5|0 -|/ 25824479 25825343 25824969 25823995 25826867 - gene protein_coding_gene TRUE TRUE AT5G64560.1|AT5G64560.2 magnesium transporter CorA-like family protein (MRS2-2) similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 1.49854740072556 13.5682118535861 4.36402635940179e-07 0.00104256589726109 12.1163986284509 13.2142823728740 1.49854740072556 0.127753096886849 AT5G25210_at 6.67239413521113 6.64996769269919 6.57882028991449 7.12767846918029 8.63976374376027 8.26527928916878 2.43375924846595 2.47788081035337 3.0643443584175 2.8798442817626 4.57617083030076 4.11296417397163 4.24197322587465 4.56661202099567 4.33989942925153 3.59191103214351 4.46555121214628 4.33645893799222 2.3295765013254 0.303075955874047 0.303145537319627 0.319022202831601 0.309593776990286 0.30551684870746 0.312910662904011 0.307039875603143 0.297890124101137 0.296127399623461 0.29193416736811 0.29193416736811 0.29193416736811 0.300559879342585 0.293776652845687 0.29193416736811 0.29193416736811 0.314899719282765 0.29193416736811 0.301922594170971 5 5 + 8724104 8725407 8724605.182 8723961 8725774 + gene protein_coding_gene TRUE TRUE AT5G25210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32030.1) 1.40752260340613 13.5531274874752 4.40411792590226e-07 0.00105126294891287 12.1121070813591 9.62412512067903 1.40752260340613 0.115303449284434 AT5G56910_at 6.58146298855183 6.6234759784986 8.49002936274602 8.3933684763424 8.860581550109 8.92526074610803 5.30580589359521 6.03583565739585 4.91149608305329 5.13394904592959 7.29846859325825 7.53072384395398 8.12431946755672 7.79182424801472 7.74082802877869 8.11161210272157 8.22749287364969 7.28402917020439 5.63739475030215 0.198010685642617 0.188085865557805 0.191700977819022 0.190012544745311 0.188085865557805 0.194394878709032 0.194305101976519 0.210721272041970 0.216714827883346 0.201342517482982 0.197320564361625 0.198589522201736 0.19666268175484 0.196883903608064 0.194421800442299 0.188085865557805 0.197160932128414 0.199970001182721 0.201421721837063 5 5 + 23040551 23041210 23040852.182 23040148 23041431 + gene protein_coding_gene TRUE TRUE AT5G56910.1 cysteine protease inhibitor similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56920.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 1.49832373492181 13.5409029496778 4.4369090864271e-07 0.00105864650802151 12.1086220977362 13.8976153737245 1.49832373492181 0.128134711382128 AT5G52760_at 8.39989098101328 8.8836549440373 10.7497470534673 10.8387170542827 9.23752540749335 8.50322439655938 2.0734343242092 2.10701751265151 4.85245999997114 3.03267970949015 4.05164796705657 4.75217818933812 3.82859058530707 4.80140403715593 4.40328288415851 5.74493408157421 4.15612508769087 5.14526699551786 3.13326387815053 0.253227839175258 0.258030704714178 0.254291019467251 0.253670521940683 0.267119650564535 0.273860332123689 0.262163361943922 0.268644965162288 0.267675961107041 0.260981651465001 0.253227839175258 0.253227839175258 0.257209504133773 0.262528607337173 0.261832911583025 0.260811323584497 0.265959885277659 0.269335136633536 0.254055748054049 5 0|5 /|+ 21404344 21404701 21404588.778 21404050 21404925 + gene protein_coding_gene TRUE TRUE AT5G52760.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.68316622159534 13.5123615406770 4.51453064240754e-07 0.0010767155582142 12.1004607736264 11.740766421387 1.68316622159534 0.153059883594758 AT5G41900_at 2.41043764041415 1.97120357811425 4.79352268445055 4.67865301324945 6.36811406053846 6.05398548004156 5.13899208690724 5.29119135203348 4.93897025131611 4.75715797209522 8.26568478871884 7.50282407370665 7.59616487800371 8.2840378866835 7.65687857218516 6.55447070361318 6.12241815565019 7.10895712515114 4.30562584426478 0.226597855173991 0.229754065600736 0.220770334110901 0.221982457218311 0.208632034108011 0.224100241785276 0.211113404786537 0.211192658901386 0.212099600951242 0.216722890377500 0.219338112125733 0.214207375241982 0.215482364256649 0.230116337895999 0.213271893417025 0.208632034108011 0.215090260680613 0.213857707822114 0.209685675567758 5 5|0 +|/ 16787455 16788630 16787998.6 16786181 16788924 + gene protein_coding_gene TRUE TRUE AT5G41900.1 hydrolase, alpha/beta fold family protein similar to BDG1 (BODYGUARD1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G64670.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO33147.1); similar to Os10g0532200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065147.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 1.28071489124235 13.378864279979 4.89821383938522e-07 0.00116675453654156 12.0618234130828 10.6151029263967 1.28071489124235 0.0991050358037362 AT5G18525_at 5.54328391239372 5.79115464783283 7.02297823040637 6.9637077801492 7.5307956237398 7.41563721398941 3.33978277797626 3.62630549660024 4.12769599608801 4.02899897928445 5.36634519440437 5.4905793361849 5.29283187154615 5.86535247574224 5.15912378991008 5.61509136139221 5.52026582298898 5.48489777289426 4.00512264591143 0.24206681217965 0.244309670203631 0.251933306285148 0.252772345300613 0.244017105140372 0.254874382650186 0.248596141600170 0.241952464080449 0.25661244177123 0.244170346883336 0.245231936544003 0.244428198433901 0.242782178190555 0.242839659330256 0.240996347167115 0.239891083178681 0.251392559547377 0.244418279480885 0.240943329521187 5 5 - 6147057 6147779 6147474.909 6146746 6149757 - gene protein_coding_gene TRUE TRUE AT5G18525.1 WD-40 repeat family protein similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52616.1); similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52617.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.07226258187115 12.9847595002458 6.25951986953806e-07 0.00148913977696310 11.9431445058533 10.6683307904997 1.07226258187115 0.0692888086375214 AT5G18470_at 7.53441389859938 8.52812395516305 10.1946066351717 10.1539527465377 8.97377319989547 8.83374156216936 1.35956117320991 0.68128922488573 4.18751442960408 1.53146926658725 2.52282346671525 4.95073413220012 2.52829769262592 3.56073429446538 2.56551776560573 3.13329718919301 2.38340273730737 2.98903319889725 1.06732235673665 0.257482340353049 0.251068445121788 0.246700921847535 0.255573569172927 0.246700921847535 0.246700921847535 0.247113813916389 0.250536688454564 0.271865349695544 0.246700921847535 0.246700921847535 0.255135137681517 0.254219576278132 0.252983294172127 0.247766712804645 0.246700921847535 0.253521319764916 0.249841861315191 0.253548594817361 5 5 + 6128766 6129136 6128926.364 6127799 6129287 + gene protein_coding_gene TRUE TRUE AT5G18470.1 curculin-like (mannose-binding) lectin family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67520.1); similar to Receptor protein kinase, putative [Solanum bulbocastanum] (GB:ABG29323.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 2.00884934606127 12.6756549790889 7.62358787695363e-07 0.00181288919713957 11.8449861766877 9.7030988380885 2.00884934606127 0.209730123413740 AT5G11150_at 7.3501202171625 7.58463612175349 8.3084521249321 8.06141632141901 9.84386783817906 8.58896620593911 4.85010550720891 4.88572148010978 2.05481642993887 2.69143159905886 6.31558705744278 5.88118444772291 6.66683280794505 6.64763438045793 5.96485176728749 5.21064779085677 6.41393823804328 5.83108519464482 2.34598855977339 0.259541360259409 0.257435285862052 0.26665176130275 0.263991278788867 0.273927533443285 0.266486541093003 0.262216292047439 0.258002093831296 0.265443043128152 0.257435285862052 0.257435285862052 0.257435285862052 0.257435285862052 0.264922024997896 0.260546422333125 0.264318558367398 0.279347232901101 0.267298518060846 0.261250873724882 5 5 - 3546642 3547755 3547245.818 3546287 3548112 - gene protein_coding_gene TRUE TRUE AT5G11150.1 ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 713 (AtVAMP713) (VAMP713) [Arabidopsis Thaliana] (GB:Q9LFP1); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Lon (GB:ABE77680.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 2.12687627559645 12.6566860612634 7.71747517796325e-07 0.00183444384980187 11.8388106553331 11.6744352638249 2.12687627559645 0.225108865568233 AT5G63790_at 9.04640637944937 9.16179877288962 10.4306127568930 10.5469180178878 10.1697578619161 9.5473022597648 7.97563783261817 8.1004340904785 7.31214258297029 6.91718487768768 9.41965460065649 9.6146827592900 9.57390717978544 9.83313771687848 8.92288872887714 9.8911995546668 9.56222241125871 9.70168091473165 6.66641691590414 0.160270453810821 0.148633064338067 0.146970281789809 0.155016286054112 0.156392945367711 0.144762988044105 0.161666614160440 0.149048086954421 0.176058099279081 0.172101769420004 0.144762988044105 0.156254065914657 0.156009298799393 0.150853200201041 0.154594504213689 0.153812084450112 0.146575166519169 0.151497596357284 0.180676235892336 5 5 - 25544147 25544685 25544334.727 25543735 25545239 - gene protein_coding_gene TRUE TRUE AT5G63790.1 ANAC102 (Arabidopsis NAC domain containing protein 102); transcription factor similar to ATAF2 (Arabidopsis NAC domain containing protein 81) [Arabidopsis thaliana] (TAIR:AT5G08790.1); similar to NAC-domain protein 5-1 [Brassica napus] (GB:AAP35050.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.30234434527586 12.6562987964465 7.71940529375265e-07 0.00183444384980187 11.8386843908542 17.6374434258816 1.30234434527586 0.113462033727617 AT5G60460_at 6.35649153647527 6.67083806855082 7.78595531796631 7.82959406133162 7.7154529140984 7.4331675714973 4.65445929293391 5.07851223588041 5.15685596798604 4.90443488960463 7.67551817211876 8.22960128905799 7.69385978369423 8.0737130046017 7.4171133918126 7.72528024193267 7.41356831251746 6.48595374952341 4.99549414171259 0.25713910088859 0.255072146493498 0.256678765835267 0.253776090054481 0.251712026804879 0.251543814608937 0.276509291553768 0.258923057379000 0.273316036321308 0.259678583475904 0.252972130260957 0.254933345592872 0.25772761022364 0.262271786075632 0.251543814608937 0.252091237456288 0.254224690615035 0.264003753856911 0.256366363774973 5 5 - 24334817 24334982 24334901.818 24334663 24335161 - gene protein_coding_gene TRUE TRUE AT5G60460.1 sec61beta family protein similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.2); similar to Sec61beta [Medicago truncatula] (GB:ABD33060.1); contains InterPro domain Sec61beta; (InterPro:IPR005609) 1.23935700918624 12.6394414965076 7.80394365159465e-07 0.00185265622288857 11.8331809582086 12.9946860379710 1.23935700918624 0.103865096111087 AT5G07440_at 5.8384414096946 5.62456889184130 6.66690873734943 6.57428526652445 6.29066924878458 5.95482836366565 4.30570759985532 4.11962464511545 3.00616888077877 3.42454416559093 6.01656901176054 6.45831627133561 5.94367335596614 6.40216258210719 6.42568053981705 5.76648455651885 6.23929225861093 5.12385927611227 3.79654012598196 0.246651281334512 0.245496950570307 0.245340889306096 0.251351594423206 0.243683594050126 0.242393080561097 0.252791236869610 0.247744841693656 0.278561037106871 0.254359219706464 0.244328651680094 0.241636048139136 0.241636048139136 0.241636048139136 0.243288121683899 0.241636048139136 0.255576089961355 0.253389786047079 0.254909773036377 5 5 + 2357269 2357962 2357668.818 2355938 2358195 + gene protein_coding_gene TRUE TRUE AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2) (GDH2) [Arabidopsis Thaliana] (GB:Q38946); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to glutamate dehydrogenase [Brassica napus] (GB:BAB62170.1); similar to Glutamate dehydrogenase A (GDH A) (GB:O04937); similar to NADH glutamate dehydrogenase [Vitis vinifera] (GB:CAC18730.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) 1.06646680574635 12.3986714626840 9.13078387813396e-07 0.00216399577911775 11.7530046598948 10.3999238315101 1.06646680574635 0.077727657312444 AT5G03350_at 12.4361123386074 12.7850525013316 12.7188714540432 12.826275394014 12.0058608892135 11.7809447186778 8.43749090779501 8.87508397735107 10.2732547357703 6.67487340391281 10.3487359270329 12.1004229189709 8.28386281204416 10.5634514499325 9.94025070329302 9.74898613485188 9.27592570094672 11.2328477000422 7.52197352967188 0.141855432257049 0.139400716927164 0.142351384830882 0.143462159602713 0.138037036202094 0.139739827850526 0.150148601129060 0.156865022294691 0.14595845863977 0.203054182883286 0.145505955401988 0.141493146918283 0.151223568752337 0.138037036202094 0.144494593112996 0.143550544312033 0.149841744099076 0.138037036202094 0.176782640713797 5 5 - 815813 816278 816046.545 815673 816657 - gene protein_coding_gene TRUE TRUE AT5G03350.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16530.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 1.22818330011649 12.3897705987001 9.18442562770539e-07 0.00217579043120341 11.7499834429151 20.6549670100497 1.22818330011649 0.106026148386629 AT5G26340_at 11.0999587840349 11.1990532338906 12.0831563793466 12.0678823553370 12.008006796417 11.5762986216021 9.48311269385755 9.13233564676455 5.35155217056042 6.52421477343915 7.51617666521161 6.44048964817836 9.03123480002596 8.74988151167545 6.07318694399801 7.96390824341378 9.62542496726219 8.73676035522769 5.57955571565643 0.213643457729148 0.214951440570129 0.219597963794139 0.21773369529438 0.218338880682831 0.223210026975549 0.216249838570278 0.213643457729148 0.266912983587168 0.23036641721435 0.219771800426430 0.247815495137554 0.213643457729148 0.222098667328524 0.250309913745353 0.224716805165297 0.231277316815228 0.220824257292449 0.244818626327426 5 5 - 9244008 9244406 9244224.091 9243514 9247069 - gene protein_coding_gene TRUE TRUE AT5G26340.1 MSS1 (SUGAR TRANSPORT PROTEIN 13); carbohydrate transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose transporter/ sugar porter Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Identical to Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1) (STP13) [Arabidopsis Thaliana] (GB:Q94AZ2;GB:O81501); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT4G02050.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91703.1); similar to hexose transporter [Vitis vinifera] (GB:AAT09979.1); similar to hexose transporter [Solanum lycopersicum] (GB:CAB52689.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829) 1.17750173115476 12.3811555505559 9.23667848357152e-07 0.00218724546490973 11.7470552921627 17.9990124531193 1.17750173115476 0.0978133206018006 AT5G52750_at 9.44271746941525 9.6586250740241 10.7252941055625 10.8251908705656 10.1213292346146 9.87365135375362 5.66933651080428 6.09101608244146 7.17595656201916 5.38835520579494 6.95087583936915 8.14016626035521 6.09422751924057 7.76873503834842 5.69482574651933 7.44285196687434 7.81425907694167 7.30329748583046 4.27719085450725 0.264778343770096 0.268320673728774 0.268036679240228 0.271729550073812 0.261498151018486 0.278253020885348 0.273228008475476 0.274846377855438 0.284247571430639 0.276903308565844 0.268253409588887 0.267166127106714 0.265149721667899 0.275993607481734 0.282559220670035 0.262459378503777 0.274290134634695 0.278407615326222 0.262822394133838 5 0|5 /|+ 21401743 21401975 21401883.222 21401269 21402150 + gene protein_coding_gene TRUE TRUE AT5G52750.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.14886172911326 12.3077553956828 9.69551079425395e-07 0.00229492740499991 11.7219490799239 15.4333896247103 1.14886172911326 0.094112696859214 AT5G57630_at 9.85898533831777 10.0105168962714 10.2396548567126 10.2580886603479 11.2445668636161 10.8577795975758 8.0054871148889 7.8086250482668 5.88069512196450 5.91522169919154 7.55610887927279 7.72378674305524 8.26816596918902 8.43314138117314 6.98586469918089 7.75174707481924 8.40213158948796 8.2017746573761 5.58961915457933 0.209303082649342 0.208619342672846 0.208748020298830 0.206281155424028 0.222187562752158 0.209081391465639 0.204532770889946 0.208761149683776 0.213483052819004 0.224158825992576 0.205451772215561 0.2046016235034 0.202422947476625 0.212754000479522 0.223500843590529 0.209220608778256 0.215675939541318 0.202422947476625 0.224516621340143 5 5|0 -|/ 23358328 23359329 23358983.778 23358073 23360484 - gene protein_coding_gene TRUE TRUE AT5G57630.1 CIPK21 (CBL-INTERACTING PROTEIN KINASE 21); kinase CBL-interacting protein kinase similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to Os12g0132200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066079.1); similar to Os02g0178000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046073.1); similar to CBL-interacting protein kinase 24 [Populus trichocarpa] (GB:ABJ91230.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.05841982922165 12.1913119723902 1.04762623773819e-06 0.00247868367848857 11.6815313370731 16.6407224383860 1.05841982922165 0.0796165587347022 AT5G15640_at 5.83934956152366 5.6227793608447 6.90173923142375 7.08092607913731 7.15551722297145 6.88264644555012 4.59672002812221 4.45547291719096 3.84199372574970 3.37805881768007 5.67510089504527 5.46324624718735 5.36344153274893 5.89828347402638 5.61535808984393 5.28027079275977 5.70900384536488 5.6523045821764 3.32029304392629 0.212635364769264 0.211281229794182 0.227810904857550 0.222333844867337 0.219249703078153 0.235731312916619 0.217163572276983 0.218610656220005 0.231240709333536 0.219289791818951 0.223091843374804 0.213898809049999 0.222518244437665 0.211807783763503 0.218810315595602 0.218169741095837 0.216680205484943 0.218809635327507 0.225228921042868 5 5|0 +|/ 5088562 5089482 5088978.9 5087374 5090043 + gene protein_coding_gene TRUE TRUE AT5G15640.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96928.1); contains InterPro domain Retrovirus capsid, N-terminal core; (InterPro:IPR008919); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.00849420082556 12.0516220588640 1.15064474004727e-06 0.00272012416547174 11.6320722312655 10.6146812116019 1.00849420082556 0.0720663672698356 AT5G03240_at 10.8671970911430 10.8037662564274 11.9382183146162 11.8735909995323 12.2668316949162 11.8520393112318 10.4109177292054 10.0187873351136 9.16703393670567 8.98491403432408 10.9619607139295 10.6803550151713 10.9804530060178 10.9771524946665 10.8991841072017 10.8974685025414 11.1459777428495 11.0357985865854 8.53147609198103 0.13372014818392 0.131123995071118 0.131123995071118 0.132151325937912 0.138312563286821 0.138631252743690 0.133760552635015 0.131123995071118 0.151726993540750 0.164000733870231 0.133299106350727 0.133467525672835 0.131123995071118 0.134355621978474 0.133948269309948 0.131123995071118 0.139874136672911 0.137842852909544 0.168396330540352 5 5 - 772158 772857 772640.667 771724 773514 - gene protein_coding_gene TRUE TRUE AT5G03240.1|AT5G03240.2|AT5G03240.3 UBQ3 (POLYUBIQUITIN 3); protein binding encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.14083609859060 11.8629437560864 1.30810009965909e-06 0.00308973243539477 11.5635373377254 21.1748028209186 1.14083609859060 0.100015883817692 AT5G46860_at 8.59835624356533 8.60283751996403 9.52473964021827 9.46128695800655 9.92323077790042 9.65699051432307 7.24675219880687 6.87503999569448 6.86045977607832 6.57885183617476 8.63576567606263 8.69394949135336 8.5898803269587 8.62309715408649 8.51535887371869 8.38057388832054 8.66976101611598 8.60467341139325 6.23820420224633 0.186352997066238 0.189228675322039 0.193417448281487 0.191966555099262 0.208399795654596 0.193603071416389 0.193467822772176 0.195518708638677 0.213451333062983 0.213012412501181 0.179556192943960 0.179556192943960 0.179556192943960 0.179556192943960 0.190420843303393 0.182026041917501 0.181964374434432 0.182417590512064 0.217777537361361 5 5|0 -|/ 19029572 19030421 19029880.7 19029248 19031231 - gene protein_coding_gene TRUE TRUE AT5G46860.1 VAM3 (syntaxin 22); t-SNARE Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Identical to Syntaxin-22 (AtSYP22) (AtVAM3) (SYP22) [Arabidopsis Thaliana] (GB:P93654); similar to SYP23 (syntaxin 23) [Arabidopsis thaliana] (TAIR:AT4G17730.2); similar to syntaxin-like protein [Solanum tuberosum] (GB:ABA46757.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 1.02821575130416 11.8276261479200 1.34015590995931e-06 0.00316410810341392 11.5504826740812 16.3103064400187 1.02821575130416 0.0798868322779547 AT5G37780_at 10.8871914291371 10.7973810651206 11.7127477157996 11.6310204247696 11.8506909964215 11.4754088069106 9.61750073330116 9.36946189413475 8.58802592982475 8.68818664469687 10.6240155060483 10.5376457101363 10.5249830265404 10.3522642244291 10.7653543752602 10.237254657367 10.3225172464649 10.3656288752919 8.57621535883511 0.106179531531653 0.103816921951435 0.103816921951435 0.105215984300255 0.105295285367402 0.11362044584936 0.106111395716126 0.108096802632252 0.131323750706815 0.122885700168820 0.103816921951435 0.103816921951435 0.108543023925430 0.108896459178490 0.105033570098545 0.105435898391698 0.107549134856021 0.106338548118295 0.123119888474793 5 5 - 15022055 15023322 15022428 15021757 15023435 - gene protein_coding_gene TRUE TRUE AT5G37780.1 CAM1 (CALMODULIN 1); calcium ion binding encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. Identical to Calmodulin-1/4 (CaM-1/4) (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.02900173359463 11.7930510694203 1.37238479854248e-06 0.00323882812456026 11.5376323274869 20.4595173484383 1.02900173359463 0.080634047448668 AT5G60540_at 8.55322428871387 8.66603378517151 9.57176645303541 9.34667564868002 10.1283967835139 9.82675993545064 8.0568544373358 7.8572298348651 5.15137198460639 6.12501097748745 7.70623545503454 7.36510006237417 8.28658143119005 8.31220126960597 7.73296163610041 7.41640147374814 8.75447618714081 8.00094510983335 5.237153569321 0.169823430104042 0.154971635313623 0.157610470879366 0.155062001714302 0.164272165346447 0.155211723010159 0.167358259031763 0.160896720051488 0.176197429556137 0.159953004709743 0.160056483849599 0.158908763872514 0.160162212886801 0.159783072807406 0.162899891551486 0.159241022699995 0.169838935372783 0.163878920081036 0.166330226627835 5 0|5 /|- 24354105 24355127 24354553.111 24353849 24356028 - gene protein_coding_gene TRUE TRUE AT5G60540.1 ATPDX2/EMB2407/PDX2 (PYRIDOXINE BIOSYNTHESIS 2); glutaminase/ glutamyl-tRNA(Gln) amidotransferase/ protein heterodimerization Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex. Identical to Pyridoxal biosynthesis protein PDX2 (EC 2.6.-.-) (Probable glutamine amidotransferase) (AtPDX2) (Protein EMBRYO DEFECTIVE 2407) (PDX2) [Arabidopsis Thaliana] (GB:Q8LAD0;GB:Q56ZP9;GB:Q9FKJ3); similar to SNO glutamine amidotransferase; CobB/CobQ-like glutamine amidotransferase [Medicago truncatula] (GB:ABE80773.1); contains InterPro domain SNO glutamine amidotransferase; (InterPro:IPR002161) 1.00156784866225 11.7276899588853 1.43568857557664e-06 0.0033867893497853 11.5131486824713 15.7265551484791 1.00156784866225 0.076267179779977 AT5G47070_at 8.5099640139111 8.46931429062973 9.91202956508257 9.92660413117845 9.5459673272135 9.26072771248245 6.1888374057176 6.32414248713141 8.25573620688814 6.47361444685537 8.45048518170418 8.29668701984693 7.83678023474516 8.72591050250963 8.08557129992224 8.42383428237618 8.3082782454439 8.71352260971471 6.46546968615253 0.156421074128078 0.150740427397906 0.152947781746408 0.152125457473072 0.150175738234621 0.150175738234621 0.179101198200331 0.159884936101185 0.157171157337787 0.170308787916217 0.155135549218823 0.151681694533562 0.159565353330609 0.156624381163567 0.158093504482978 0.150175738234621 0.152240848979164 0.156139888271583 0.172186670134847 5 5|0 -|/ 19135991 19136501 19136254.1 19135770 19138136 - gene protein_coding_gene TRUE TRUE AT5G47070.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G17660.1); similar to protein kinase, putative [Brassica oleracea] (GB:ABD65030.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.890361452246332 11.4970815315069 1.68634333519412e-06 0.00397471124105254 11.4247255334960 16.2272352593341 0.890361452246332 0.0551428091449607 AT5G46240_at 6.62653357674318 6.9145614271862 8.58677468797231 8.61221664508355 8.21379139160571 7.89541036109737 5.44910732530111 5.80566245983278 3.64700500731078 5.3387810384186 6.93525526103963 6.99709767450662 6.98859511570274 6.04753683017792 6.47123874779554 6.78700803833488 7.89511334753464 8.10107887294763 5.6958468011268 0.203670241782935 0.198734313764769 0.195753795880192 0.197044499775424 0.195753795880192 0.195846939813416 0.199231444930849 0.205732104463579 0.226573529322906 0.202649670333192 0.195753795880192 0.199705289684666 0.201360501805289 0.197587176552125 0.203155339436447 0.195753795880192 0.196838196268903 0.201291813897439 0.212423725045364 5 5 - 18760939 18761527 18761132.818 18760793 18763957 - gene protein_coding_gene TRUE TRUE AT5G46240.1 KAT1 (K+ ATPase 1); cyclic nucleotide binding / inward rectifier potassium channel potassium channel protein (KAT1) Identical to Potassium channel KAT1 (KAT1) [Arabidopsis Thaliana] (GB:Q39128;GB:Q42426); similar to KAT2 (K+ ATPase 2), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18290.1); similar to inward rectifying potassium channel [Brassica rapa subsp. pekinensis] (GB:AAX19659.1); similar to inward rectifying shaker-like K+ channel [Vitis vinifera] (GB:AAL09479.1); similar to inward rectifying potassium channel [Vitis vinifera] (GB:AAL24466.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 1.08560941120305 11.4804695394736 1.70619385985066e-06 0.00401979273380815 11.418230811723 13.2238787851646 1.08560941120305 0.0966793976101821 AT5G57800_at 8.97741549236621 9.16006161491427 10.7252633214167 10.8450998761887 11.5820428128403 11.4235176567024 10.1550903377825 10.0266771643202 9.9784628439843 9.80652875214927 12.0177529079560 11.0180083571001 11.4280793989005 11.5150596771064 10.8300894746058 11.0166750876330 10.8941887572956 11.2034248821294 9.65046086255844 0.120176279091326 0.112661982046769 0.116256852201359 0.113497771241600 0.117479677589622 0.121278106217019 0.112580759747464 0.115486431787288 0.120215524412844 0.120760964071398 0.117763388010789 0.117088539232598 0.112580759747464 0.117401886666755 0.112791433688619 0.115973730603916 0.129410811366031 0.118732383893515 0.118453378166735 5 5|0 +|/ 23440255 23441029 23440638.7 23437435 23441278 + gene protein_coding_gene TRUE TRUE AT5G57800.1 WAX2; catalytic encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. similar to CER1 (ECERIFERUM 1) [Arabidopsis thaliana] (TAIR:AT1G02205.2); similar to lipid transfer protein (GB:AAA33934.1); similar to glossy1 protein [Zea mays] (GB:AAR90847.1); similar to Gl1 protein [Zea mays] (GB:AAR97643.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Sterol desaturase; (InterPro:IPR006088); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.869795826016888 11.3946666013077 1.81294266283854e-06 0.00426404114299624 11.3844114905532 20.8880096866022 0.869795826016888 0.0517258549543107 AT5G47180_at 6.88364734788348 6.99057254883378 8.38271158533857 8.54883107894103 8.93920857520468 8.63493178035286 5.63540976750928 5.69352937099053 5.40834286239798 5.00268526569944 6.54437229742373 5.70733340991479 7.1948669349327 6.6620121768258 6.93159193247077 6.1833966298132 7.06172406794683 6.54745082436212 4.74625664558708 0.237576000588195 0.237576000588195 0.239501439057323 0.242731013504188 0.239809382903559 0.242950800701065 0.238116476180917 0.237576000588195 0.248016300220025 0.239227068270413 0.237576000588195 0.237576000588195 0.237576000588195 0.242060099882802 0.237576000588195 0.240183982556441 0.247813067125097 0.237830896128959 0.239280636482737 5 5|0 -|/ 19178642 19179838 19179397.375 19178371 19181024 - gene protein_coding_gene TRUE TRUE AT5G47180.1|AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1), protein binding [Arabidopsis thaliana] (TAIR:AT3G60600.1); similar to vesicle-associated membrane protein, putative [Brassica oleracea] (GB:ABD65040.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) 0.893758766745466 11.1155329215888 2.21492867281697e-06 0.00520286745244707 11.2711460133314 13.2918661529348 0.893758766745466 0.0635822101710778 AT5G56630_at 8.8390652069326 9.02388613297981 9.82139034358323 9.8493559853216 9.53215083159418 9.45738099233743 7.84308910681759 8.00567253464334 6.17772282389195 7.34929904110317 8.78646940380747 9.04584856420968 8.88037345009569 8.65786175515288 8.79898357100569 8.78672037735029 8.7083178973834 9.00343934172774 6.63339267600004 0.166446696957041 0.160989302575337 0.156677758194755 0.158153777061430 0.156677758194755 0.15903634833588 0.162423407202753 0.162075578338712 0.192149626691081 0.173814598720869 0.161656192804808 0.157527564705051 0.156677758194755 0.167583369544865 0.159424111571016 0.159456958284422 0.167572119665357 0.169739779507158 0.182189193888119 5 5 + 22943291 22943908 22943606.909 22941148 22944189 + gene protein_coding_gene TRUE TRUE AT5G56630.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE84859.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.822160612375344 11.0720054526593 2.28610562540024e-06 0.00536548990281435 11.2530247754421 16.8233188794879 0.822160612375344 0.0447823045764877 AT5G06690_at 8.84915603322854 8.69957872953527 9.14042656411755 8.93811321161258 9.8282260307056 9.50895957213715 7.04446698461003 6.73626362171877 6.83519593207715 6.96877469519652 9.53173858020628 8.8843483335617 9.19386364382246 9.36451844776598 9.20941335787506 8.82871999653747 9.1455323258544 8.67167092745297 6.88448876664609 0.145124370478666 0.143118464551933 0.148946045288472 0.140852594487630 0.147806308767218 0.155187135960789 0.145293852558006 0.164541696385559 0.157380412695435 0.154286513375915 0.148814303292199 0.148282155618640 0.145672792630364 0.146596308100985 0.144847711224517 0.144109267748748 0.149088212402309 0.142651348024594 0.150049745843701 5 5|0 -|/ 2060993 2061854 2061652.333 2060504 2061957 - gene protein_coding_gene TRUE TRUE AT5G06690.1|AT5G06690.2 (THIOREDOXIN-LIKE 5); thiol-disulfide exchange intermediate Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335)|Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.994740253845553 10.9741125802287 2.45563885097958e-06 0.00575601746669613 11.2118059584149 16.5930882599287 0.994740253845553 0.0882789898491215 AT5G46230_at 6.76367116624603 7.15706290567061 8.73832574333472 8.92690154144225 6.34472909689226 6.67633331903099 3.33705203459912 3.56359796000568 3.15443185213909 2.35663690102748 4.60922794438910 3.77363034707702 3.3255915664629 4.41506502846704 3.75385261461026 3.76566942097896 4.05654870639041 4.66570768801354 2.19515087351337 0.246639617195945 0.250861504939350 0.249601478000113 0.238109438257958 0.246219987746529 0.254881750556589 0.242724331943959 0.251295853567182 0.252676811360186 0.247711052319564 0.238109438257958 0.254879211525946 0.240937044368781 0.242446831809028 0.246635518498077 0.238109438257958 0.254511252394421 0.242825796123102 0.257870228618964 5 5 - 18759850 18760126 18759978.818 18759667 18760272 - gene protein_coding_gene TRUE TRUE AT5G46230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09310.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC10818.1); similar to Os07g0119800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058773.1); similar to Os01g0210600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042369.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.06206256337105 10.8998781612872 2.59350641972203e-06 0.00607139852856928 11.1801144029416 9.74565999095702 1.06206256337105 0.102614602478845 AT5G04170_at 7.97429662090103 7.85627570083548 8.8875597002523 8.6755295768276 9.14298357429458 8.7160845478827 6.49501229720266 6.4320175488918 6.53334487904482 6.08202856505915 8.33909316654394 8.31357347742474 8.5289713859712 8.45465789219035 8.44793762594145 8.18192183803792 8.31410428983884 7.9706361848189 5.82834303864459 0.169883318544439 0.165068942429289 0.163977220927173 0.164086670001224 0.167870802438271 0.175532047954161 0.169206782854505 0.172268959974602 0.176965455617174 0.169283123112166 0.164848637127990 0.163977220927173 0.172658178238351 0.169643261894627 0.164113415716933 0.164536033782689 0.163977220927173 0.164690925322065 0.167677366648826 5 5|0 +|/ 1145950 1146864 1146192.9 1145432 1147782 + gene protein_coding_gene TRUE TRUE AT5G04170.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G10300.3); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); similar to putative cysteine protease [Pisum sativum] (GB:CAB63845.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.952666052347555 10.6479077525439 3.12953720097807e-06 0.00731372843868575 11.0696757620127 15.2558536843087 0.952666052347555 0.0856746133727944 AT5G24530_at 11.2162698295896 11.3898427974131 12.4457571860851 12.4343070307261 12.0190597779844 11.7318048180434 5.77526018637826 6.07333308893632 10.9710900170588 6.98877556707921 8.04151777231186 8.97499591242936 8.7749617818221 8.88091401558218 7.6663149120523 9.35424537355855 8.18664462694043 8.73539043170927 8.68003190010403 0.240681807686677 0.239726316555933 0.240102577708059 0.239726316555933 0.240798767270298 0.24052630008553 0.272016576248225 0.260669450081871 0.244333261992307 0.250172683506601 0.248989707999346 0.239726316555933 0.240652391441181 0.246359074669979 0.239726316555933 0.242584643989465 0.248033029930509 0.249632513658657 0.239726316555933 5 5 + 8382060 8383019 8382371.273 8378836 8383404 + gene protein_coding_gene TRUE TRUE AT5G24530.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE85154.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.910390372918302 10.5852875742461 3.28110071377566e-06 0.00766465126737993 11.0415246486005 19.1141238050853 0.910390372918302 0.0777055038700096 AT5G23660_at 8.50670596522994 8.80559662080488 9.86177907016534 9.56709969126786 10.1315390294118 9.59703248288594 3.93824640696829 3.99850660774579 2.5666607173508 2.60110251849429 2.35614151915395 2.96929819620556 3.96064068553782 3.31972862292314 3.00491104751657 3.60698407690554 4.75020824723267 2.54904222592188 2.75285105975272 0.366836010266070 0.37120534124756 0.367514204106103 0.376401278569965 0.377486241635568 0.366042644679923 0.341309861572397 0.343566743785449 0.341371107595358 0.342485688187587 0.347484904929828 0.335520295889046 0.343528919322484 0.33513863302126 0.338478151009697 0.335832588993792 0.34379400681101 0.33513863302126 0.339325857309703 5 5|0 -|/ 7972010 7973198 7972571 7971654 7973928 - gene protein_coding_gene TRUE TRUE AT5G23660.1 MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) homolog of the Medicago nodulin MTN3 similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G48740.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); similar to Os11g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067955.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 1.09072840751963 10.3588672407487 3.9010308683433e-06 0.00909330295410824 10.9373148480292 11.0282252807469 1.09072840751963 0.118070988034856 AT5G66320_at 5.86414951209258 5.94943786279547 6.7622322745188 7.29079261931309 6.76125142054579 7.04218002439072 3.18624916530518 3.582073580692 3.71764568430813 3.26882976292002 5.25220677314023 6.27095794286428 4.97124526625610 5.5172976785493 5.56676712097437 5.21827719833104 5.11728406352343 4.22417712105531 3.3959872861292 0.255242068132553 0.247312811019881 0.260314946932023 0.247062676344324 0.246477215961402 0.258292880338710 0.247997037079026 0.244170427594496 0.250551600953557 0.247016928481253 0.242934573270993 0.245434069873628 0.249606678943643 0.248709362613725 0.245990958201652 0.243543884750489 0.257365404345139 0.248730906634326 0.251706919553836 5 5 - 26513454 26513996 26513730.273 26513181 26515075 - gene protein_coding_gene TRUE TRUE AT5G66320.1|AT5G66320.2 zinc finger (GATA type) family protein Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. Identical to GATA transcription factor 14 [Arabidopsis Thaliana] (GB:Q9FH57); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G51080.1); similar to hypothetical protein [Thellun (GB:ABB45844.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 1.12409513883240 10.3130594370337 4.04164758381894e-06 0.00941703887029813 10.9157605870046 10.1688445858096 1.12409513883240 0.125060942175314 AT5G14940_at 8.46104936010727 9.20077895214395 10.4406553296486 10.4418129298335 10.4969018999507 10.1194960822387 8.80273502977571 8.88445801459866 6.00556405046743 6.68771959207905 8.43003444965884 8.08864615427455 8.65340647432832 8.43276672116881 8.05667771075602 8.39291765774768 8.84277953940314 8.41485523302809 4.61423802193454 0.187299677399167 0.174464693537484 0.178968803257065 0.180158543151119 0.176382742581689 0.181362263430462 0.175756997922029 0.178508252867969 0.222087178767092 0.192615090211593 0.175925409173050 0.175412586903707 0.174464693537484 0.187941209482767 0.182632872838444 0.179005942388852 0.189297701266816 0.181054610214991 0.204927122082363 5 5 - 4831835 4832323 4832107.909 4831751 4834398 - gene protein_coding_gene TRUE TRUE AT5G14940.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G01350.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE79897.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.22914588850217 10.2734355482174 4.1678218630309e-06 0.00970685711899896 10.8969856397527 16.6975781401402 1.22914588850217 0.144406314956513 AT5G23240_at 10.3263487363755 10.4141743821381 10.7481024499747 10.8518541016728 11.1075902997239 10.4566499289415 6.79094818540484 6.57607253410931 4.6027027151582 6.32034968833217 6.17458125666081 5.01555381725047 6.81466358449345 7.84384948232082 5.66891590441852 6.41779564042635 8.09237558291799 6.78609786368732 3.40641268998929 0.281688193575402 0.282953333443173 0.284156946991344 0.285790502715331 0.284038656652333 0.283677108993057 0.28055737012449 0.280259470188631 0.293208042103726 0.276276833281342 0.275647942466613 0.282746646791553 0.279590113994139 0.290047318599971 0.277381228808679 0.281008649799713 0.280842290272736 0.281212338300946 0.28545882390339 5 5 - 7826897 7827432 7827131.364 7826735 7828727 - gene protein_coding_gene TRUE TRUE AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42750.1); similar to H0103C06.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86103.1); similar to Os04g0675400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054247.1); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.08442926854517 10.1536258000907 4.57667199475975e-06 0.0106407623878164 10.8394706656973 15.3480763303002 1.08442926854517 0.1209369412439 AT5G18120_at 8.2702594688607 8.58404744500917 9.57441003989608 9.5101150046097 9.8660567630253 9.68781104610905 8.0796786888649 8.06747627907191 7.41451834388809 7.2860722199313 9.26739484760213 8.88364366232624 9.28141540899587 9.34143896647102 8.83935471784668 9.36473407176852 8.98224692729676 9.03158710651803 7.05461359545597 0.16031797105224 0.148554390445493 0.151489461025174 0.151051628538919 0.161498933723645 0.159324274149710 0.161936674865626 0.158412641484052 0.164325896020392 0.166196736327131 0.154321628019966 0.151573684913857 0.154602781434864 0.158063371355204 0.153926758198416 0.148554390445493 0.164191283724339 0.148985962781678 0.188084739145966 5 5|0 +|/ 5992475 5993645 5993320.556 5990958 5993938 + gene protein_coding_gene TRUE TRUE AT5G18120.1 ATAPRL7 (APR-LIKE 7) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. similar to ATAPRL5 (APR-LIKE 5), electron carrier/ protein disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G03860.1); similar to Thioredoxin domain 2; Thioredoxin fold [Medicago truncatula] (GB:ABE86406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.808466705861724 10.0599249087593 4.92746025717466e-06 0.0114366352569024 10.7936958446113 17.1428376836117 0.808466705861724 0.063470538796558 AT5G26040_at 4.83722941040726 4.78730640212592 6.39434452933611 6.36703734126871 7.74889400212981 6.60059100100623 3.82837400151283 3.83819017281997 3.13433827776295 2.73230749162363 5.47506548915627 4.70755747439115 5.44732239956239 5.70301413996476 5.15504905894708 4.85572472653144 5.8794580377033 4.72307820910641 2.68180634397320 0.258071850142378 0.258164411332443 0.273484253127408 0.259521661440758 0.287929524454069 0.277322323880053 0.256125607851662 0.257877214276991 0.265226149099520 0.276976476937069 0.256125607851662 0.262037729578673 0.257540555249983 0.27338444286319 0.258429262840606 0.259878023265333 0.265550865068671 0.256415710267628 0.282763943435611 5 0|5 /|- 9100533 9101181 9100778.333 9099160 9101639 - gene protein_coding_gene TRUE TRUE AT5G26040.1|AT5G26040.2 HDA2 (histone deacetylase 2); histone deacetylase Class III RPD3 type protein similar to HDA9 (histone deacetylase 9), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G44680.1); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286)|similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 1.52637179320271 10.0508734060793 4.96289409374375e-06 0.0115139142974855 10.7892365927275 9.59662972242933 1.52637179320271 0.198970282028893 AT5G29000_at 4.85543746837471 4.60788483347195 6.92075194504965 6.78595791712371 6.6938819768842 6.9337639011497 4.88808904648623 5.12445026393259 4.03188194412216 4.87304615670406 6.2176039244385 5.91642745831116 5.77274387949285 5.9488118835305 6.02056122972537 6.36162833470895 6.95938448507825 5.77961420968959 4.34807286509812 0.207311750581457 0.199707538335743 0.204662625739599 0.204429615367226 0.205451422941866 0.220312244572342 0.209713224348511 0.203312389767399 0.218357034729593 0.208374511308815 0.200062368803696 0.202979957443631 0.209144316485549 0.210454207699412 0.200856206943876 0.199707538335743 0.207598579296279 0.201891410653971 0.207233535377292 5 5|0 -|/ 11022355 11023477 11022883.778 11022087 11024964 - gene protein_coding_gene TRUE TRUE AT5G29000.1|AT5G29000.2|AT5G29000.3 myb family transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to CDPK substrate protein 1; CSP1 [Mesembryanthemum crystallinum] (GB:AAF32350.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.845060656428266 9.90806814990411 5.56098867406769e-06 0.0128848107578148 10.7179973815087 11.1211591261908 0.845060656428266 0.075998724405227 AT5G54500_at 10.3318867274943 10.4749174714682 11.3485018737377 11.2601827209689 11.1982984244656 11.2261993855184 8.63759950509055 8.9502445046904 9.09330263332147 9.18884207507831 10.3886183825833 10.3622613281530 10.4816796757935 10.4520447396402 10.2482478232330 10.3118006338128 10.2780124547161 10.1569073629912 9.0336316426256 0.114847767268313 0.116683820526487 0.113538235534026 0.113795359946075 0.117572104002134 0.121784967080030 0.11696404032424 0.113160240352742 0.124674358068182 0.116826413643950 0.10904501284897 0.10904501284897 0.10904501284897 0.117922262708614 0.114989753135883 0.110623508246110 0.11333500739111 0.113311594835928 0.123732322802023 5 0|5 /|+ 22142909 22143430 22143159.9 22141782 22143730 + gene protein_coding_gene TRUE TRUE AT5G54500.1 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 0.785693643608963 9.85944922022002 5.7824986968783e-06 0.0133922669819701 10.6933586046138 20.1485814935745 0.785693643608963 0.0616189863002328 AT5G23870_at 6.46438134006174 6.32802634984668 7.39201708315003 7.38570452517857 9.2036170814985 8.45313435995349 6.49395616266083 6.02742993970726 6.76221025253645 5.55673325331307 9.43857665805474 8.23444426813334 8.74554312942367 9.04277475928632 8.16624190713758 8.7285315120457 8.70200218535676 8.66358793971253 5.70261928692996 0.246404413682714 0.240693608251990 0.240186995021317 0.250748276236462 0.231678273670189 0.242019576912972 0.231898276955947 0.239978920708955 0.256360141509673 0.246760361786418 0.228660183336665 0.226647242037921 0.231447472635239 0.231987166778994 0.228826983292716 0.226647242037921 0.239506712175738 0.226647242037921 0.238350001289331 5 5|0 -|/ 8046333 8047278 8046811.25 8045847 8050178 - gene protein_coding_gene TRUE TRUE AT5G23870.1|AT5G23870.2|AT5G23870.3 pectinacetylesterase family protein similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62060.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34281.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 1.23629996427671 9.84875458247344 5.83252456370006e-06 0.0135022943649656 10.6879122756368 14.5797335515006 1.23629996427671 0.154736763902295 AT5G39090_at 5.39683065505886 6.07778378607453 8.58833239958654 8.79464980307824 7.26892093358918 7.41989118609653 5.07973883664096 5.38311184940245 4.11690076682698 4.48915643830890 5.64161891020865 5.24415609646227 6.50652792669284 6.39808793794051 5.6834324843104 7.09961029357349 7.0112048049456 6.11746503743587 4.82112073400613 0.228949650107037 0.226444960125736 0.238468375078796 0.239458759965796 0.227088338492590 0.239268559035547 0.244537711203675 0.232790403184209 0.259651725437499 0.23940982267227 0.229032652845178 0.227664604704345 0.231427366834374 0.232043548953358 0.231429225637957 0.226444960125736 0.242483250058473 0.228684144034179 0.242649176509174 5 5 + 15661612 15662109 15661831.818 15660831 15662344 + gene protein_coding_gene TRUE TRUE AT5G39090.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 1.10248119352937 9.57320080810734 7.30230433889793e-06 0.0168610207185153 10.5442098155223 12.0954018892710 1.10248119352937 0.13638324195834 AT5G25840_at 8.82165657227367 9.00168306033863 8.8777997706476 8.93072869608673 9.75356495150306 9.85644873880767 7.31683369579075 6.9912391685367 7.34733122836726 6.36626048640242 9.28153922081568 9.49023965050025 8.57419304171377 8.48263028432601 9.00926252360478 9.1753502025375 8.74172118709533 8.82161284487123 7.21185537210973 0.181550761603442 0.178124283720183 0.174724075703359 0.174724075703359 0.182453775596144 0.178074622873760 0.181681534007670 0.184170817861199 0.185220344116009 0.206758424884907 0.179484772303788 0.179601312624644 0.179559857911704 0.180556965580009 0.184846569012573 0.181604133518966 0.180664282065397 0.176550471949201 0.193990103591417 5 5 - 9010940 9011399 9011152.818 9010727 9011501 - gene protein_coding_gene TRUE TRUE AT5G25840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79770.1); similar to Os06g0554200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057846.1); similar to Os01g0199700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042311.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26169.1); contains InterPro domain Protein of unknown function DUF1677, plant; (InterPro:IPR012876) 0.781688389402544 9.54960699248416 7.44607495660312e-06 0.0171780949248834 10.5315976539950 16.6548531559445 0.781688389402544 0.0674264759745732 AT5G62720_at 9.7144528204465 9.6448404869754 10.1051794274243 9.86864589403623 11.0227426010617 10.5180606969653 8.74373697844879 8.27737364737813 8.35851212906367 8.11567831780482 10.4552502883541 10.6155539219734 10.3855866397080 10.5255298987912 10.8401084659839 9.96938345698907 10.0628876819857 10.5503997708214 8.13227049588704 0.135478182105969 0.137582953151462 0.136699990783605 0.137287508652848 0.135456129780916 0.140825577155916 0.133532054713893 0.160453117286681 0.151255343637888 0.154461285173466 0.136640422040021 0.133491499688107 0.138128289983883 0.133491499688107 0.137781429509395 0.133491499688107 0.153360302049798 0.138497624206530 0.151317553378224 5 5|0 +|/ 25209343 25211851 25210125.8 25209068 25212235 + gene protein_coding_gene TRUE TRUE AT5G62720.1|AT5G62720.2 integral membrane HPP family protein similar to integral membrane HPP family protein [Arabidopsis thaliana] (TAIR:AT3G47980.1); similar to Os03g0684700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050921.1); similar to hypothetical protein [Oryza sativa] (GB:AAK14421.1); contains InterPro domain HPP; (InterPro:IPR007065) 1.04005106550193 9.48222260165996 7.87423536337483e-06 0.018150112512579 10.4953034540521 19.0507496506726 1.04005106550193 0.126340876515232 AT5G14920_at 9.20281375688979 9.37506536012431 6.3387187338431 6.40243529989587 9.10502929252138 9.19037150076759 4.00329702421465 4.61989709825636 5.93741812759118 6.29494345558293 9.69839445103877 10.0228178971079 9.14872834722161 9.48203024121853 10.3516169953151 9.03838107533668 8.38840448511396 10.2135289677258 7.70237152598884 0.175173039788445 0.173638271123923 0.182012685205952 0.191049069282616 0.175422528288188 0.179977888632147 0.193864495034699 0.202650359211634 0.189088604795485 0.191594298788923 0.179854914906412 0.178192179497137 0.173638271123923 0.178137660689400 0.177151162643964 0.180877121321064 0.180299367042305 0.177253669845837 0.1943232949644 5 5|0 +|/ 4827088 4827721 4827517 4826482 4827983 + gene protein_coding_gene TRUE TRUE AT5G14920.1|AT5G14920.2 gibberellin-regulated family protein|structural constituent of cell wall similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854)|similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882) 0.969721683551873 9.4781846933045 7.90074442990433e-06 0.0182033151664996 10.4931156297393 15.3736529302628 0.969721683551873 0.112313591320107 AT5G40760_at 6.70715315960987 6.85573863825258 8.46990836496347 8.48296561889765 8.26347487338409 8.00633084551519 5.97697152890657 5.72994097677145 6.75039186236735 6.38478838425448 8.29722521900413 8.4045014921467 7.31293025935274 8.20820434722191 8.3380658197217 8.23397124540033 7.49426144693206 8.50385290472529 6.47273057148115 0.185201752084199 0.186345166878676 0.182543536844801 0.184952056992634 0.181641579715868 0.188485265725514 0.186838198733254 0.199361798598374 0.209286512073425 0.197925542982333 0.181641579715868 0.185913266727839 0.185965918164259 0.185777605816179 0.189726244809832 0.185743828081757 0.193551021163746 0.190709074801458 0.189997204745776 5 5 + 16330526 16331747 16331196.364 16327976 16332002 + gene protein_coding_gene TRUE TRUE AT5G40760.1 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6); glucose-6-phosphate 1-dehydrogenase Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. Identical to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 (EC 1.1.1.49) (G6PD6) (G6PDH6) (ACG12) [Arabidopsis Thaliana] (GB:Q9FJI5;GB:Q9SUJ9); similar to G6PD5 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5) [Arabidopsis thaliana] (TAIR:AT3G27300.3); similar to glucose-6-phosphate 1-dehydrogenase cytoplasmic isoform-like [Solanum tuberosum] (GB:ABB55386.1); similar to glucose-6-phosphate dehydrogenase [Populus suaveolens] (GB:AAR26303.3); similar to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD) (GB:P37830); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) 0.77071859664578 9.43938695997945 8.16054915695038e-06 0.0187855841592998 10.4720190588274 14.6291089330447 0.77071859664578 0.0668885448249116 AT5G42940_at 6.10358497050117 6.35741257972927 7.43869938730709 7.64954686545851 7.64932757873352 7.74567431750131 5.77251742626522 5.7858861338041 4.6632821578715 5.10044695076354 7.2743622229249 7.1132465974316 7.51559676299488 7.3346778246931 6.39576571745945 7.67204847887596 7.66275585306103 5.74965811647399 5.60632995596853 0.192731109586741 0.194305178803217 0.198108483483572 0.195444016877653 0.192547093745282 0.202464888168329 0.199350461400757 0.193566520372704 0.195276293528807 0.198817586124600 0.203967328164066 0.194456946227457 0.191947456866693 0.196881024567577 0.200915551815556 0.195470516389304 0.208901116620667 0.196002725397229 0.195206430267777 5 5|0 -|/ 17233896 17234877 17234364.111 17233558 17237718 - gene protein_coding_gene TRUE TRUE AT5G42940.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G45180.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE89604.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.744879189635812 9.43533582020762 8.18821787850437e-06 0.0188410893384386 10.4698083488290 12.9193896415495 0.744879189635812 0.0595334531003058 AT5G06320_at 10.7279509444320 10.8008591776828 11.7130835807083 11.7886985469910 11.2605469183813 10.9320945962667 9.31311364432494 9.39992218349419 9.7766878522363 8.8854473730496 10.6083389721059 10.6607571582236 10.4043317713277 10.8750568943302 10.34345469388 9.84934592705998 10.2826460421505 10.4689192128312 8.38548280167924 0.117470304995164 0.111291089952474 0.117855993340192 0.116757831191477 0.118410005269628 0.115835906158859 0.123774387441264 0.115003964937990 0.130000047032069 0.136839202094687 0.111290580656010 0.111290580656010 0.111532430284215 0.112001918137541 0.114476996587238 0.115490238711292 0.115667800615897 0.115790609656628 0.146864222625859 5 5 - 1931028 1931574 1931348.455 1930794 1931769 - gene protein_coding_gene TRUE TRUE AT5G06320.1 NHL3 (NDR1/HIN1-like 3) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane. similar to NHL2 (NDR1/HIN1-like 2) [Arabidopsis thaliana] (TAIR:AT3G11650.1); similar to hin1 like protein [Capsicum chinense] (GB:BAD11071.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.74716562170689 9.37941690172367 8.58093674514466e-06 0.0197361545138327 10.4391403512252 20.468273203857 0.74716562170689 0.0615378792927487 AT5G56350_at 9.23231866477334 9.49676504141888 10.4991515014252 10.5559559950990 10.0438839895789 9.71967547193246 8.91622441083005 8.99084955431069 7.84846049729013 7.16634815518553 9.41430084769842 9.3483837436941 9.424174672101 9.4532866729291 9.28320406698446 9.4413777898279 8.97309413918639 9.30837618490429 6.81795338623319 0.142220403883296 0.136803570733022 0.140184464200838 0.141247057986303 0.139226196641556 0.146319585857013 0.13741068755586 0.135132869467083 0.154392184080425 0.167188487109168 0.134052930467346 0.133163668115722 0.133163668115722 0.138645416197455 0.138606445331161 0.133163668115722 0.158066612855808 0.137796396879270 0.18315449490561 5 5 - 22837513 22837938 22837783.545 22837232 22839992 - gene protein_coding_gene TRUE TRUE AT5G56350.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:CAI53675.1); similar to Pyruvate kinase [Medicago truncatula] (GB:ABE78303.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42954); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 0.774097830016368 9.15580177174028 1.03734791797255e-05 0.0237863877591106 10.3135983922695 17.9860341341221 0.774097830016368 0.0741996389101723 AT5G42050_at 11.3097747624312 11.4238175906055 12.7455438766670 12.7277234309428 12.2803894456281 12.1043491060794 11.1291482037018 10.8499218328096 9.4459946438331 9.3440923093401 10.5459947601843 10.5289227551990 10.5943582136163 10.5090927356846 10.3531544615031 10.5314873168939 11.0188629492702 10.6286193579861 8.95511947913578 0.0802998280224706 0.0776380532672733 0.0782764752371923 0.07818502347009 0.0814155042027543 0.079476589262566 0.0780746931461966 0.08078514940947 0.0852064647840549 0.0824213768725288 0.0803073415864299 0.0776380532672733 0.0794944353727759 0.0789184938663244 0.0790108546249744 0.0783120961216449 0.080708660249688 0.0781873967085901 0.08934304647656 5 5|0 +|/ 16833460 16834005 16833742.25 16832717 16834529 + gene protein_coding_gene TRUE TRUE AT5G42050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27090.1); similar to N-rich protein [Glycine max] (GB:CAI44933.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain no description (SM00767); contains domain gb def: Hypothetical protein At5g42050 (PTHR23230:SF16) 0.722794058765264 9.11544020598383 1.07392538991132e-05 0.0246143699367674 10.2904337711295 21.7399403875558 0.722794058765264 0.0605149425499267 AT5G06560_at 7.04471151727795 7.34962958398554 8.37943876950716 8.61907917905825 8.99040154963131 8.91440419190516 6.45991160162328 6.11485633337896 6.86363248097889 5.79128779769219 8.20719730560175 8.2559912950821 8.05669474570448 8.16140497325702 7.59623887442842 8.13941693200425 7.81797128524026 7.92817078856279 6.4408715215578 0.215182116977851 0.215963599312598 0.208270502894419 0.211452062366376 0.213610692183196 0.21373462629836 0.204936324066883 0.212152672400495 0.222836975224354 0.221712651749211 0.21431749048455 0.206778112709442 0.205003627569544 0.216106845276964 0.207785828076706 0.207489460828888 0.217315571215359 0.222706453891166 0.221785695244272 5 5 - 2003683 2004546 2004209.182 2003305 2006189 - gene protein_coding_gene TRUE TRUE AT5G06560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11850.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA98276.1); similar to Os11g0575900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068136.1); similar to Os03g0650800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050787.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.832631249977333 9.07052557024048 1.11631507910561e-05 0.0255524521607274 10.2644710100502 14.9268789449933 0.832631249977333 0.0907904356786884 AT5G23390_at 6.95283678446464 6.94059304186366 8.00876426304853 8.22024212524298 8.61605577789374 8.31957288805893 6.20862037963355 6.3286430329266 5.3968800031779 5.63402119798165 7.27629117689165 7.47768180710168 7.35192264369252 7.51543868365472 7.57896205762104 7.79380236278283 7.49019658710973 7.04300996288915 5.70873590113244 0.2187174645984 0.216591284326443 0.225606077623956 0.227235674004202 0.219866599817181 0.217843199360451 0.215044752640058 0.231689889032444 0.222160725738876 0.214427480902109 0.219700660621759 0.212607986457047 0.217644539441088 0.218967005186391 0.224661327981561 0.212492279910526 0.223892670902429 0.219213207269982 0.217923869166640 5 5|0 -|/ 7870748 7871499 7871105.3 7870516 7874508 - gene protein_coding_gene TRUE TRUE AT5G23390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os04g0677400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054264.1); similar to Os02g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047529.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25093.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Protein of unknown function DUF639; (InterPro:IPR006927) 0.738725705228018 9.06864441155038 1.11813042291218e-05 0.0255828240762306 10.2633793370346 13.9598121337992 0.738725705228018 0.066390846194707 AT5G47880_at 7.68006870404752 7.72200552679477 9.34093220951017 9.42381259814596 9.44000913559088 9.07275498501991 8.36073139686576 8.23948963378597 6.0313599643264 7.16424257731517 8.45868595907441 8.44879225466626 8.75192345663547 8.5660083232793 8.4830539775727 8.80828267680363 8.85941391010284 8.03475403260206 6.55546134803669 0.166641598349326 0.162216981632846 0.167025534004905 0.166356685434261 0.163658984118273 0.174958485950619 0.163268715824844 0.163692224720801 0.177599282833830 0.171550038646414 0.170130621533318 0.169005927810831 0.167636349121917 0.160623458130889 0.165351433792432 0.160623458130889 0.169017508835204 0.182399721202978 0.176900644799143 5 5 - 19403812 19404351 19404037.182 19403326 19405788 - gene protein_coding_gene TRUE TRUE AT5G47880.1|AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones. Identical to Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to eukaryotic release factor 1 homolog (GB:AAA91169.1); similar to eukaryotic peptide chain release factor subunit 1-3-like protein [Solanum tuberosum] (GB:ABC01885.1); similar to eukaryotic peptide chain release factor subunit 1-3-like [Solanum tuberosum] (GB:ABB87106.1); contains InterPro domain eRF1 domain 2; (InterPro:IPR005141); contains InterPro domain eRF1 domain 3; (InterPro:IPR005142); contains InterPro domain eRF1 domain 1; (InterPro:IPR005140); contains InterPro domain Peptide chain release factor eRF/aRF subunit 1; (InterPro:IPR004403) 0.744392210224048 9.03388669610558 1.15226646973205e-05 0.0263408114980747 10.2431465949885 16.2275016672542 0.744392210224048 0.0688320508426703 AT5G10160_at 4.64658927338317 4.90216683526464 5.67213383988701 5.27500354887861 6.45712067152491 6.58575562109095 5.25136589434146 5.28844206496757 4.78207575486534 4.87749840795299 7.6984728526271 7.90899468769057 6.41243712931673 7.66914558740339 8.12225412678647 6.83811889666964 6.43337874467452 7.38211114435129 4.36015945860571 0.272140739650158 0.266964765683602 0.280794999232995 0.262991014057846 0.259986136805666 0.268076379743982 0.263184077946685 0.258051516443122 0.271128241322820 0.268701104947429 0.262701594404445 0.261725982995666 0.266817249416378 0.260823765951933 0.27238245843097 0.258666942225785 0.265792865114497 0.260710368226042 0.263775077003661 5 5|0 +|/ 3185922 3187124 3186258.5 3185747 3187313 + gene protein_coding_gene TRUE TRUE AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] (TAIR:AT2G22230.1); similar to 4D11_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67531.1); similar to putative 3-keto-acyl-ACP dehydratase [Brassica napus] (GB:AAK60545.1); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; (InterPro:IPR010084); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (InterPro:IPR013114) 0.797377809734766 8.94468342206004 1.24526915069509e-05 0.0284045893273550 10.1906766431766 11.5005015619996 0.797377809734766 0.0849474475226602 AT5G57550_at 4.24138957810927 4.64810131266610 6.06467300925298 6.22043321320804 6.2580663862724 6.77613634777145 1.23164336618348 1.41260339144314 8.67404277446867 2.88629923049243 9.00276741183844 3.12226804664262 5.85581387173754 7.23901132148025 5.92470492138734 4.14734554078227 3.83133127272938 6.87141968214163 4.74850843458063 0.249134048438278 0.253365016341100 0.249021914418456 0.256645536661079 0.254006364182113 0.261210322566335 0.262054778030919 0.267899099573968 0.257469726775454 0.249021914418456 0.252450970662258 0.252428228946309 0.251287549227254 0.249021914418456 0.253485516265270 0.249021914418456 0.250347397693378 0.25439452572192 0.249021914418456 5 5 - 23322400 23322993 23322605.909 23322114 23323647 - gene protein_coding_gene TRUE TRUE AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds xyloglucan endotransglycosylase-related protein (XTR3) Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) (XTH25) [Arabidopsis Thaliana] (GB:Q38907;GB:Q9SEB0); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to xyloglucan endotransglycosylase-related protein (GB:AAB18364.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.939367034906854 8.78223540963819 1.43672018928073e-05 0.0327284859118151 10.0930762063429 10.1994389448332 0.939367034906854 0.121239421327477 AT5G25930_at 6.48049476600663 7.09913704649882 9.77081874730252 9.16496222899858 6.88459138738993 7.06308608678702 2.62172103874707 2.65214432396789 5.39014024057774 4.0691858792142 5.56082098152342 6.33877884650243 4.87586570164524 5.3820188976209 4.69976780147048 4.65622974247164 4.03047763791781 5.58012964444702 3.95508664253703 0.300412054670832 0.303059895347594 0.315275136029185 0.31645280006107 0.303145833080281 0.301013590203748 0.301680316346636 0.309038715191073 0.297507181590109 0.299064829748798 0.296429131102036 0.296429131102036 0.296429131102036 0.299864983228032 0.312152366896 0.296429131102036 0.299245091090422 0.307039636625668 0.297886328371643 5 5 + 9053301 9053902 9053673.909 9050797 9054146 + gene protein_coding_gene TRUE TRUE AT5G25930.1 leucine-rich repeat family protein / protein kinase family protein similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G25910.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17641.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17639.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81143.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.09148491280641 8.76120448509274 1.46380041311329e-05 0.0333307354065895 10.0802440526953 11.2731104919504 1.09148491280641 0.153088964712031 AT5G63880_at 7.12058010658604 7.47297044772221 8.64512672600989 8.27919765544594 8.77305983509725 8.47804988154539 5.91850875102101 5.49121796314972 5.25697280307328 5.35603880189023 7.4622524581539 7.12626618360175 7.23192767025962 7.52469402389324 7.12492396099483 6.89372525412794 7.31455475267566 7.22253899361877 5.25897624878135 0.217512426957542 0.215580423782023 0.22540529796152 0.228757513507062 0.223899840453773 0.220473408612932 0.216746227366966 0.226119629238186 0.223150333041728 0.221186307948325 0.218404831861249 0.214965012630969 0.220806893660076 0.215588278869617 0.217716100435415 0.214965012630969 0.232840989565013 0.225290981437731 0.237046640473752 5 5 + 25581759 25582457 25582149.182 25580964 25582724 + gene protein_coding_gene TRUE TRUE AT5G63880.1 SNF7 family protein similar to SNF7-related [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) (GB:Q503V0); similar to Os02g0596500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047322.1); similar to hypothetical protein LOC445397 [Danio rerio] (GB:NP_001003874.1); contains InterPro domain Snf7; (InterPro:IPR005024) 0.95749805209236 8.75660047450673 1.46980368700075e-05 0.033452731916137 10.0774288037910 13.7864754358625 0.95749805209236 0.125711001490836 AT5G57050_at 5.27993036193545 5.45874181719661 7.4694757729878 7.44558601953824 7.45167154916817 7.25245286079387 6.34489205000762 6.14690586211052 4.96827079337837 5.35058532827641 6.90489546445738 6.96723450785817 7.57332200612658 6.52627738858599 6.50687524408985 7.20031506546136 8.03394400608034 7.22617892651787 5.43837887905102 0.194030989406823 0.187416963007399 0.186335424098276 0.188828157495982 0.194820339669527 0.189846127757483 0.190582087981563 0.187570341701865 0.207759163090281 0.192314641423352 0.187307371300030 0.1840166412154 0.192198948688214 0.187648765861516 0.185784413729516 0.187662863487944 0.194870510176995 0.1840166412154 0.196803569689613 5 5 + 23105703 23106409 23106032.091 23104461 23106853 + gene protein_coding_gene TRUE TRUE AT5G57050.1 ABI2 (ABA INSENSITIVE 2); protein phosphatase type 2C Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. Identical to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2) (ABI2) [Arabidopsis Thaliana] (GB:O04719); similar to ABI1 (ABA INSENSITIVE 1), calcium ion binding / protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT4G26080.1); similar to Os05g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056498.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:AAT39223.1); similar to Os01g0583100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043415.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.685166403944098 8.74708530811892 1.48229714993191e-05 0.0337222601609509 10.0716035550358 12.7911030332418 0.685166403944098 0.0577678327975694 AT5G54860_at 6.97533113727339 7.21896949303622 8.47499579687067 8.60165299171545 6.76651668125757 6.40920730862772 3.95671516258128 3.63912129424491 4.56776521029005 2.91908224706350 5.30527780996386 5.71085720297192 4.28919229109965 5.0799323698322 5.01689438738387 4.37155641076217 4.54756705561912 5.49931581555780 3.04010771532351 0.231263899080984 0.235596962692804 0.243428119221824 0.238748440708856 0.232906934566450 0.250000712290591 0.229052220431777 0.230017499895270 0.246070053511171 0.234137432044665 0.237795269646504 0.233665037290518 0.233156487452256 0.238693554316715 0.252453875749648 0.22875658562672 0.242995867770654 0.234798464166371 0.22875658562672 5 5|0 +|/ 22303509 22304184 22303820.4 22301807 22304432 + gene protein_coding_gene TRUE TRUE AT5G54860.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G64890.1); similar to Biopterin transport-related protein BT1 [Crocosphaera watsonii WH 8501] (GB:ZP_00518975.1); similar to Os01g0243200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042562.1); similar to Os03g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051544.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 0.820911668252575 8.73723447833027 1.49535511746802e-05 0.0340043753712228 10.0655629435414 10.7485933459298 0.820911668252575 0.0954059553215766 AT5G46070_at 5.95782244152609 5.96231755424518 6.54672548698352 6.67130268349733 6.98328812718594 6.93648697417456 5.55392527918087 5.70075208415645 4.63744425444469 4.63872221399517 7.22805775402148 7.40961077095488 7.0922294963328 7.23288679004942 6.90026294016407 7.3414645012677 6.9170736973075 6.47501829330831 4.95240984953837 0.171239142026549 0.172022895973547 0.171133008988853 0.169837945168695 0.170371974537239 0.169604532318182 0.172143344867550 0.178289332866828 0.191860440295659 0.186530651856242 0.172040714215708 0.174241133454751 0.175305694657961 0.171369707784636 0.169316505174946 0.173932825675427 0.175604965274354 0.174590951346148 0.186153707928776 5 5 + 18705036 18705543 18705247.636 18700591 18705934 + gene protein_coding_gene TRUE TRUE AT5G46070.1 GTP binding / GTPase similar to guanylate-binding family protein [Arabidopsis thaliana] (TAIR:AT1G03830.1); similar to Guanylate-binding protein, N-terminal domain containing protein [Tetrahymena thermophila SB210] (GB:XP_001018996.1); similar to Os02g0307000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046641.1); contains InterPro domain Guanylate-binding protein; (InterPro:IPR003191) 0.6251120690699 8.73032056940906 1.50459590651847e-05 0.0341994649551647 10.0613172715443 12.1977947304113 0.6251120690699 0.0343015745694191 AT5G13200_at 8.61117985133741 8.67091340777573 9.48028917244266 9.41252852526496 9.23814173200017 9.12974367560447 6.76682216499341 6.60798730838349 3.98465097149217 4.91213974240802 5.74728588003588 5.94303273059123 6.88052368600891 6.55545307364402 5.15427982874541 6.22717199604233 6.74382784019407 6.24808917735788 4.64404525572811 0.244171269163660 0.245967261580299 0.247447592249018 0.248483575441607 0.247128436699659 0.245553451409166 0.244256135497571 0.242948047463543 0.272602597034288 0.261231641966697 0.249471388673205 0.248395521153407 0.242948047463543 0.253823495673116 0.246877193017092 0.24474575633227 0.271620238503252 0.248096695786642 0.266779779042904 5 5|0 +|/ 4207327 4208036 4207648.7 4207007 4208292 + gene protein_coding_gene TRUE TRUE AT5G13200.1 GRAM domain-containing protein / ABA-responsive protein-related similar to GRAM domain-containing protein / ABA-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G22475.1); similar to ABA-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98234.1); contains InterPro domain GRAM; (InterPro:IPR004182) 0.626058600479075 8.67460734994372 1.58140521969060e-05 0.0358978984869765 10.0269234902167 13.8402357379521 0.626058600479075 0.0367667873299313 AT5G51980_at 5.15960104165921 5.82827383328776 7.16884158417137 7.17208990065438 6.55266573712134 6.92623348527878 5.05860811606094 4.72226475115024 4.49140719305226 3.98150488482373 6.05492802709577 6.85899661379897 6.02353292093815 6.3822751734838 6.66993876318784 6.6387932842341 6.70422030742611 6.1364676147423 3.91991682779218 0.214164152628351 0.212471000808320 0.212537013210249 0.212867549156038 0.213855742788729 0.218496263512111 0.214398996047105 0.211726648789258 0.219883169786148 0.216246969076284 0.214663375742641 0.214836751219565 0.20962635948158 0.218568233243953 0.219905661169192 0.218374588696143 0.226021532594528 0.215005081736505 0.223237907511263 5 5|0 -|/ 21130887 21131896 21131435.5 21130591 21133423 - gene protein_coding_gene TRUE TRUE AT5G51980.1|AT5G51980.2 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative|nucleic acid binding similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.03194783493003 8.61051516265126 1.67517094132365e-05 0.0379928769492203 9.98695432532817 11.3558658345077 1.03194783493003 0.144768638311257 AT5G11960_at 7.44394227544427 7.50083194099692 8.9189983676642 8.92939704995533 9.12280299931317 8.81811014057934 7.29534113316438 7.29175402412559 6.32742299961837 5.96787377249035 8.05347487639895 7.85498185204882 8.28540128958438 7.96399251714482 7.5408112593007 7.958510084591 7.95087197262794 7.78996955268782 6.4373681477227 0.204009015543761 0.203185983351918 0.197674746318085 0.197803431203439 0.196476891868675 0.200065563369171 0.202321263222565 0.193058565163324 0.20599908152462 0.199920981766149 0.19720874004538 0.19716065456306 0.193058565163324 0.202373658401871 0.203748402545761 0.205312804889466 0.208067143908957 0.202981091658293 0.203242268310243 5 5 - 3859266 3860647 3859914.3 3858580 3861516 - gene protein_coding_gene TRUE TRUE AT5G11960.1 similar to permease-related [Arabidopsis thaliana] (TAIR:AT4G13800.1); similar to hypothetical protein MtrDRAFT_AC152551g11v1 [Medicago truncatula] (GB:ABE86250.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 0.656178944798417 8.52635804845492 1.80774742515219e-05 0.0409816341282002 9.93380959688722 15.2496338991513 0.656178944798417 0.0536735036999232 AT5G20830_at 9.04415913505312 9.02508842611897 10.2276686750072 10.1775468837830 9.792396252268 9.74684964684456 8.20436463358229 8.51126488835508 6.77610728593695 7.87109751822795 9.39854416343113 9.00879635057001 8.94955889579522 8.85313844817106 8.83640624183204 8.77076461311875 9.18466824453421 9.39356050077726 7.61129145546412 0.0985553923149945 0.0991066738353676 0.103663862895243 0.105481505824333 0.0986926778619018 0.0978708485622146 0.111780325755818 0.099661850252834 0.140843676665847 0.103640115131585 0.101396638905897 0.0970344882656592 0.0970344882656592 0.102494819409425 0.099300787555758 0.0970344882656592 0.101246498033797 0.106275497722427 0.107206101920509 5 5|0 -|/ 7050748 7051263 7051072.7 7050228 7055197 - gene protein_coding_gene TRUE TRUE AT5G20830.1|AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase Encodes a protein with sucrose synthase activity (SUS1). Identical to Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SUS1) [Arabidopsis Thaliana] (GB:P49040); similar to SUS2 (SUCROSE SYNTHASE 2), UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G49190.1); similar to SUS4, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G43190.1); similar to SUS3, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02280.1); similar to sucrose synthase [Citrus unshiu] (GB:BAA89049.1); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (GB:P49040); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (Nodulin-100) (GB:P13708); contains InterPro domain Sucrose synthase; (InterPro:IPR000368); contains InterPro domain Sucrose synthase, plants and cyanobacteria; (InterPro:IPR012820); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.656912014852453 8.50638170450616 1.84089277832166e-05 0.0416962214289855 9.92108301117158 17.5756315353707 0.656912014852453 0.0544883558305729 AT5G42420_at 7.28642176269782 7.31852433161234 7.36630900909214 7.61348070630043 9.04996825439495 8.54462828609294 5.98232713689465 5.18401038144114 4.73631132780784 4.81299402228176 7.35747412611412 7.67657017277407 7.21766656605614 7.32492818951396 7.57933758840744 6.55749647558678 6.78760315921309 7.38673355328882 4.15619656179373 0.219253648129841 0.204962393865114 0.204413479280121 0.210058409120470 0.232056135910547 0.211345195634206 0.224513486811385 0.210347217868478 0.223135956367922 0.212303046582233 0.204031604354937 0.205855201074947 0.21567440790151 0.212956812838145 0.223952100198189 0.216430516843876 0.235220494409679 0.209934758509724 0.230974984490569 5 5|0 +|/ 16986726 16987216 16987050.222 16985886 16987658 + gene protein_coding_gene TRUE TRUE AT5G42420.1|AT5G42420.2 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE94615.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853)|similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to putative transmembrane protein [Oryza sativa] (GB:AAK50365.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 1.13851183096604 8.50274005996635 1.84700714927161e-05 0.0418162418595091 9.91875833539002 13.1954471666477 1.13851183096604 0.169098631436194 AT5G38895_at 6.82773192602881 7.03770892127328 8.72114956275624 8.62887707790941 8.69302048267264 8.6222751842005 6.0707330886664 6.26423782170489 5.25619177674616 5.44760020911137 6.18791713736999 6.12292461937651 6.97462552412615 6.41488332941793 6.26680870855025 6.69440270799612 7.52332395860162 7.15241750409428 5.50652007595613 0.210251182961768 0.205228561198862 0.214231270971663 0.217175718513174 0.217796564114252 0.218732231637022 0.201676779056212 0.200429752927342 0.210183409939348 0.20545457187278 0.204426388172512 0.208070476305444 0.200429752927342 0.208082474815031 0.201094748289935 0.200429752927342 0.202112690853176 0.20560296698598 0.212054263544073 5 5|0 +|/ 15589386 15590218 15589634.889 15588733 15590756 + gene protein_coding_gene TRUE TRUE AT5G38895.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02290.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96894.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.649733616788932 8.45400910879437 1.93102246886547e-05 0.0436411077963597 9.88751200985765 13.6435169032163 0.649733616788932 0.0533540548041505 AT5G48380_at 10.2729079811206 10.5039310230796 11.0548192662742 11.1181544960635 10.7178666743805 10.4741413251502 6.70729574685739 7.25318664779324 8.88958630780233 7.6492100024159 9.25326826498594 9.68285793168275 8.53537737338617 9.17635811024835 8.90364150617965 9.0384913360899 8.76745554298937 9.35744304500619 7.56554097000243 0.152749564319722 0.150815215172786 0.150815215172786 0.153827172563813 0.150815215172786 0.153541414407661 0.172831939834293 0.168703941558819 0.157817613743856 0.166581009621810 0.150836205049106 0.150815215172786 0.159257022765286 0.152574861940632 0.151325618058779 0.150815215172786 0.152932896678965 0.150815215172786 0.172086065735116 5 5 - 19621851 19622380 19622123.909 19621315 19624285 - gene protein_coding_gene TRUE TRUE AT5G48380.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.851984800689865 8.36339240318531 2.09870483085094e-05 0.0472838198390716 9.82871723333407 18.3248582612039 0.851984800689865 0.111453372941220 AT5G52310_at 10.6348891313396 10.5882084577401 10.3671726787914 10.1941912035967 10.6622269956149 10.5410389690094 9.30106984471297 9.36078323823811 6.77177511343725 8.19026620728343 9.6332030567281 9.30483723744285 9.91345972831708 9.61859421357548 9.1048615526619 10.7207081989531 9.56079028422797 9.73689698367555 7.54936176113047 0.134869532236404 0.132164771508034 0.130554017991328 0.129700208188498 0.135195292104389 0.135215570778745 0.133458181209188 0.129399111824198 0.176368919812575 0.158856345753871 0.137803781722685 0.133624408585526 0.129399111824198 0.138419432515278 0.146863132286195 0.130210830356437 0.142903013353665 0.133203956932805 0.167320824529243 5 5 + 21259953 21260519 21260289.818 21258075 21260839 + gene protein_coding_gene TRUE TRUE AT5G52310.1 COR78 (COLD REGULATED 78) cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression Identical to Low-temperature-induced 78 kDa protein (Desiccation-responsive protein 29A) (LTI78) [Arabidopsis Thaliana] (GB:Q06738;GB:Q04981); similar to RD29B (RESPONSIVE TO DESSICATION 29B) [Arabidopsis thaliana] (TAIR:AT5G52300.1); similar to cor78 (GB:AAA32776.1) 0.606149376436502 8.34055706985044 2.14345511492933e-05 0.0482706091882085 9.8137577558824 18.8076825319961 0.606149376436502 0.0388329048242131 AT5G47060_at 5.68692747537669 6.76940755564395 7.83565089895004 7.95444629027994 8.59716088625746 7.78839765989521 4.68011795576144 4.82808375409602 3.88219161843016 3.61873818589182 5.49199510306104 6.91733890651965 5.74059546100755 6.40197834288452 5.29069111258763 6.23403847734123 5.31840833214304 5.82741836252446 3.07733322359383 0.244816582919726 0.231862106449507 0.244120279850891 0.241787066362843 0.233737167530370 0.244723825430181 0.238804948153975 0.23570868588921 0.248339948457364 0.242971285215887 0.231862106449507 0.232133313822810 0.236112872988765 0.247221006446927 0.246508701440042 0.234359116091731 0.264037425026754 0.251526511801921 0.231862106449507 5 5 + 19134187 19134817 19134469.909 19134015 19135273 + gene protein_coding_gene TRUE TRUE AT5G47060.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to hypothetical protein 26.t00087 [Brassica oleracea] (GB:ABD65032.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 1.45789464218269 8.33245392138688 2.15958723310454e-05 0.0485907127448521 9.80843540061452 11.4819719036479 1.45789464218269 0.236133536020862