ID expr.6.4.exp_090507.CEL expr.6.4.exp_150607.CEL expr.6.5.exp_090507.CEL expr.6.5.exp_150607.CEL expr.6.7.exp_1_040507.CEL expr.6.7.exp_150607.CEL expr.7.2.exp_1_040507.CEL expr.7.2.exp_150607.CEL expr.6.4.3_exp160807.CEL expr.6.4.4_exp160807.CEL expr.6.5.11_exp160807.CEL expr.6.5.2_exp160807.CEL expr.6.5.6_exp160807.CEL expr.6.5.8_exp160807.CEL expr.6.7.19_exp160807.CEL expr.6.7.20_exp160807.CEL expr.6.7.21_exp160807.CEL expr.6.7.22_exp160807.CEL expr.7.2.1_exp160807.CEL se.expr.6.4.exp_090507.CEL se.expr.6.4.exp_150607.CEL se.expr.6.5.exp_090507.CEL se.expr.6.5.exp_150607.CEL se.expr.6.7.exp_1_040507.CEL se.expr.6.7.exp_150607.CEL se.expr.7.2.exp_1_040507.CEL se.expr.7.2.exp_150607.CEL se.expr.6.4.3_exp160807.CEL se.expr.6.4.4_exp160807.CEL se.expr.6.5.11_exp160807.CEL se.expr.6.5.2_exp160807.CEL se.expr.6.5.6_exp160807.CEL se.expr.6.5.8_exp160807.CEL se.expr.6.7.19_exp160807.CEL se.expr.6.7.20_exp160807.CEL se.expr.6.7.21_exp160807.CEL se.expr.6.7.22_exp160807.CEL se.expr.7.2.1_exp160807.CEL Chr ChrList StrandList From.Min From.Max From.Mean start end strand type Note isChr5 isClean IDlist Short.description Currator.summary Description logFC t P.Value adj.P.Val B A M M.se AT3G16670_at 10.5592155823743 10.5663194161630 2.93150681854914 3.12192027237412 3.20985345791683 3.62953667059365 8.57606225971434 8.59862933945175 7.67007749745681 6.31631910295705 3.97923225148292 10.0217103160498 3.07827138274232 3.68835187027739 9.34211807501798 2.46376205428759 4.12215787619764 3.72948424938252 7.02358307422864 0.384159064341538 0.386027975135638 0.377130827350739 0.375592585059119 0.372940861565905 0.372940861565905 0.378233562229264 0.380939082751446 0.387002380490511 0.378447949821754 0.374305830538303 0.383126345600439 0.379310973539665 0.372940861565905 0.379605380602977 0.380375277751615 0.377296215388253 0.385618678472714 0.37635567815129 3 3 + 5681522 5682038 5681774 5681425 5682337 + gene protein_coding_gene FALSE TRUE AT3G16670.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G16660.1); similar to Phylloplanin precursor (T-phylloplanin) (GB:Q56S59) -4.1510214466759 -43.9748092279122 1.32308814398461e-13 2.08055610641579e-09 14.5733959594696 12.4273617609641 -4.1510214466759 0.079858871763409 AT4G22950_at 2.45920345738567 2.61900394535838 7.84228524614925 7.94269054760933 8.44520064570552 7.74275804769473 3.52918958090934 3.56295998852205 1.59731747973650 2.61447172935355 4.78593139797608 4.35321549433539 5.3769578295364 7.2244111007292 6.15171783294883 7.02302837633594 7.00092200999315 5.71960503795541 1.43200939477461 0.234229844030811 0.234229844030811 0.234229844030811 0.242109019949675 0.23482734054935 0.242390676166898 0.235670205464483 0.234229844030811 0.256014806361513 0.238900640089532 0.235028439667012 0.235044232277770 0.235210561042042 0.247710555247711 0.244721049069291 0.237670115443658 0.244779367261904 0.239921798443515 0.254129910436157 4 4|0 -|/ 12023979 12027317 12025341.222 12023926 12027432 - gene protein_coding_gene FALSE TRUE AT4G22950.1 AGL19 (AGAMOUS-LIKE 19); transcription factor MADS-box protein AGL19 Identical to Agamous-like MADS-box protein AGL19 (AGL19) [Arabidopsis Thaliana] (GB:O82743); similar to AGL14 (AGAMOUS-LIKE 14), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G11880.1); similar to MADS-box protein AGL14 (GB:AAC49082.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 4.51192590621696 40.5134718947848 3.21243326257583e-13 5.05123006207423e-09 14.5035030565443 9.43578135054904 4.51192590621696 0.126007500615384 AT3G30720_at 6.9772613746156 7.10099786960797 2.39279582304523 2.26603298179379 2.00885616327064 2.37880092855586 3.12236117938497 3.5304100582992 5.60263104984672 7.1974618662006 2.26041671227633 2.02025710192079 2.34082031592579 2.33268847935289 2.22963782382034 2.34302517458122 2.99946355596859 2.49245392745208 6.08101585571018 0.316530467352288 0.307018572945775 0.275813786382732 0.273287500414197 0.273287500414197 0.276583712879485 0.273386730864242 0.273287500414197 0.300305184767423 0.311657937370532 0.286106776035681 0.281940415312989 0.275745672760992 0.287163157821089 0.283837735685383 0.273287500414197 0.27925352169301 0.278673746650763 0.308710970850319 3 0|3 /|+ 12352085 12352180 12352134.3 12351626 12352205 + gene protein_coding_gene FALSE TRUE AT3G30720.1 unknown protein -3.41874684190873 -33.765805219315 2.29865307923822e-12 3.61417223648626e-08 14.3056356363566 8.05771370248737 -3.41874684190873 0.100124133672810 AT3G46370_at 5.8521054481967 5.42107038547599 1.91726629404478 1.41589241214715 1.42044510283032 1.71940334740554 7.84168937340301 7.23653719677045 7.38025023598448 7.50696807664637 3.74293682073483 3.24601906867432 3.59844913175312 4.14221421283802 3.92943163204712 3.08725687954673 3.85794705030851 3.86003812293951 7.04532723772229 0.226325189084703 0.214414666711775 0.216764945365237 0.219024959883329 0.224227463586694 0.214097193799513 0.227063364120092 0.224542717742454 0.231831902784713 0.217025910540892 0.208570287788836 0.209141378114025 0.220748234554625 0.213921812792618 0.208570287788836 0.210196582873392 0.213115061870667 0.215605296006499 0.218197684308768 3 3 + 17065857 17066462 17066232.091 17062940 17066499 + gene protein_coding_gene FALSE TRUE AT3G46370.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46340.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G46420.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46400.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -4.29870535689185 -33.5728654684769 2.4452079776655e-12 3.8443559824857e-08 14.2983161890038 9.59999376085407 -4.29870535689185 0.163511675421749 AT3G05730_at 10.6756367675512 10.5722561031340 4.45616315723792 4.55960712907676 5.82492340837975 5.97057136186083 9.79758620684767 10.0117945773261 7.21501871446633 8.77886736907171 7.91152549913421 10.6248148678154 7.83964605506799 8.46470762149685 10.4124178563509 4.2642676531655 7.52637277465538 7.01241801103469 9.11876144142028 0.196257732356933 0.19656545468432 0.196870151794635 0.20363090894108 0.198872380414233 0.204995530593925 0.199724851447661 0.196361928331462 0.203011065730499 0.20034692226013 0.194894956336762 0.198132007117549 0.19528938346363 0.199610933596376 0.198406180666602 0.199078928012463 0.208820058606045 0.199509593600014 0.194894956336762 3 3|0 +|/ 1696076 1696467 1696346.7 1695982 1696714 + gene protein_coding_gene FALSE TRUE AT3G05730.1 Encodes a defensin-like (DEFL) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05727.1) -2.71268168277762 -31.2396217813323 5.3147065599136e-12 8.35525018284017e-08 14.1998265382559 15.9225192392565 -2.71268168277762 0.0514780962811783 AT1G52890_at 8.53188540137141 8.90103059778221 10.2325528146647 10.3922451297885 10.2459269154277 9.69333875453285 4.68786479699512 4.56728858899541 3.93383516363563 3.70796169572664 6.39360731846366 5.91462949893881 7.02280051455934 6.0622142384622 5.826486715235 7.65384431677273 8.37714758077001 7.19140965376104 2.80146563475750 0.281880395728497 0.279228866231669 0.278463658430478 0.283622372857203 0.283535042279071 0.28328367448374 0.277522955404944 0.276346989412189 0.282972389495321 0.279101157966281 0.276346989412189 0.280368697801529 0.281601687310387 0.284413485383986 0.276346989412189 0.279939370029737 0.276346989412189 0.276593999030841 0.284576728154718 1 1 - 19700989 19701580 19701195.727 19700672 19702150 - gene protein_coding_gene FALSE TRUE AT1G52890.1 ANAC019 (Arabidopsis NAC domain containing protein 19); transcription factor encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. Identical to NAC domain-containing protein 19 (ANAC019) (ANAC) (Abscicic-acid- responsive NAC) (ANAC) [Arabidopsis Thaliana] (GB:Q9C932); similar to ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55), transcription factor [Arabidopsis thaliana] (TAIR:AT3G15500.1); similar to NAC-domain protein 485 [Brassica napus] (GB:AAP35056.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 3.39658926944891 31.1774170017556 5.43003190777423e-12 8.5360101590211e-08 14.1969236393231 13.5496941137749 3.39658926944891 0.120103191893493 AT2G21650_at 8.58394661310563 8.75838336891464 3.74536061060993 4.01880298415324 3.47117696585657 3.24578434519067 6.59790095022831 6.77200136517199 4.49653801548407 4.7984313892319 3.94056289815735 4.03230220619654 3.60060531095117 3.09495486507761 3.32310104789528 4.77680799399844 2.78583532394799 3.20010516482321 6.40920603155337 0.284176813674068 0.283114132632110 0.272152583712740 0.267779679871143 0.268190727638008 0.27651040099656 0.278580182284626 0.276877320392836 0.277905678435261 0.273023945093634 0.272967982788103 0.267655025716005 0.269055229615359 0.285639651446897 0.267655025716005 0.267655025716005 0.289616772685116 0.272518060312659 0.272638869253992 2 2 + 9266736 9266987 9266845.182 9266663 9267736 + gene protein_coding_gene FALSE TRUE AT2G21650.1 MEE3 (maternal effect embryo arrest 3); DNA binding / transcription factor similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G39250.1); similar to MYB transcription factor MYB142 [Glycine max] (GB:ABH02867.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -2.84910882097235 -30.6920120024413 6.42962529673455e-12 1.01067280039370e-07 14.1737219658054 10.0636743988059 -2.84910882097235 0.074697036797757 AT1G18710_at 3.07354200802156 3.36244754187485 6.91973514228012 7.08286967649856 8.35587903646696 7.7024134327434 3.33321953215006 3.09230906644609 1.43258105594491 2.10929856280942 2.78171979293451 4.41623127447734 6.80165751390414 5.1106586086778 2.84336569123055 5.45788247696657 5.71633075761514 3.42944405959821 2.35440758953278 0.305516768934156 0.295722920908735 0.309571797439830 0.323840373172399 0.306987260860454 0.317598864610706 0.296719534689781 0.295722920908735 0.328178312061473 0.300468914516582 0.308555927216928 0.295722920908735 0.30017735834656 0.303259888447282 0.299166974251848 0.299159766566359 0.319136987299036 0.307960019563624 0.29668278804255 1 1|0 +|/ 6452172 6452929 6452621.2 6450586 6453106 + gene protein_coding_gene FALSE TRUE AT1G18710.1 AtMYB47 (myb domain protein 47); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB95 (myb domain protein 95), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G74430.1); similar to MYB transcription factor MIXTA-like 2 [Antirrhinum majus] (GB:AAV70655.1); similar to protein 1 [Petunia x hybrida] (GB:CAA78386.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 3.45203849368530 30.1398970028877 7.81714251771866e-12 1.22869846093502e-07 14.1460969763317 8.63284710023748 3.45203849368530 0.133502945134044 AT3G23880_at 6.134290892215 6.35439358294645 1.89019843891709 1.80184300500628 2.95015195700558 2.51606549981527 6.64341157503858 7.20805882327944 5.84857077666394 6.02495474186639 3.08613073779153 4.187995415406 4.13318701569483 4.303115636994 3.44094828183205 5.32306709417577 3.06744862258321 2.97532815876326 7.09325091620445 0.236253354575289 0.235085348514399 0.232399710966792 0.244565594990984 0.236040230111197 0.246287314653639 0.238927255133778 0.230912443718473 0.247184300368015 0.234538412373321 0.238039642433765 0.230912443718473 0.230912443718473 0.230912443718473 0.233651054791604 0.236463631024959 0.242248112688815 0.237356162387284 0.232689636015568 3 3 - 8622096 8622549 8622306.091 8621995 8623169 - gene protein_coding_gene FALSE TRUE AT3G23880.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G06240.1); similar to Cyclin-like F-box; F-box protein interaction domain [Medicago truncatula] (GB:ABE90596.1); similar to Cyclin-like F-box; F-box protein interaction domain [Medicago truncatula] (GB:ABE77917.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) -3.4015400921785 -30.1011348530483 7.92616201444178e-12 1.24575488380981e-07 14.1441060846446 9.50575743776963 -3.4015400921785 0.129907405034099 AT1G11210_at 8.72462994874146 8.93424365536814 9.73669510659433 9.66118977884786 10.4558892793904 10.0097215717738 6.48881003879863 6.18595784311498 3.41552123295832 3.06398943541259 5.89468020734034 5.29158657219979 7.3407926529961 6.43121520704152 5.54496317129237 6.19050217678969 8.01289484747023 5.98454707854192 3.34202955153765 0.330336864818349 0.331915799132013 0.338939981265657 0.331299708142841 0.340698809291498 0.336349891779220 0.319201322439159 0.32030519324135 0.342421362428377 0.340670130599120 0.319201322439159 0.328325443238674 0.319995934904121 0.321915939392618 0.322342205434972 0.319201322439159 0.319704105823825 0.333960035229001 0.342532783410660 1 1 - 3755883 3756559 3756193.182 3755677 3756998 - gene protein_coding_gene FALSE TRUE AT1G11210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11220.1); similar to fiber expressed protein [Gossypium hirsutum] (GB:AAY85179.1); similar to cotton fiber expressed protein 1 [Gossypium hirsutum] (GB:AAC33276.1); contains InterPro domain Protein of unknown function DUF761, plant; (InterPro:IPR008480) 2.72250728094263 26.8076241552320 2.75369120614187e-11 4.32770109957257e-07 13.9461053852538 13.5797643924179 2.72250728094263 0.100970246457405 AT4G16146_at 9.83165914138968 10.0930207269445 10.1646635065586 10.2022718946112 10.8974168643468 10.4420259137412 8.12741871293888 7.91485438797016 5.43974256318317 6.78531952688068 9.8739138448494 10.1745291618158 10.1992453770048 10.0857359218817 10.0468436432097 9.48359566594595 10.0459275860392 9.88895414959138 5.84449787154115 0.155394203765553 0.155591171483819 0.154645957772833 0.155324315966211 0.158269942298631 0.158725509277402 0.167300806268138 0.167622762621167 0.182073847085472 0.176846819453096 0.155102317570507 0.152429587181978 0.149924811704046 0.159795992266773 0.149924811704046 0.155851319027595 0.157455057744651 0.154347309388229 0.183926420142655 4 4|0 -|/ 9142852 9144325 9143224.857 9142418 9144592 - gene protein_coding_gene FALSE TRUE AT4G16146.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69510.2); similar to negatively light-regulated protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97694.2); contains InterPro domain Lg106-like; (InterPro:IPR012482) 2.69325640871378 26.7800682159032 2.78425060116137e-11 4.3754498197251e-07 13.9441733825466 17.7081813048929 2.69325640871378 0.0982439693214116 AT1G56300_at 10.8470758732758 11.0869973973496 10.9697011062395 10.9902399994775 11.6387166944813 11.4309484529756 9.27115149674222 9.22201553033437 7.12155035358173 7.24146155610164 10.2540646805430 10.1137014113155 10.4112549443490 10.4545039565026 9.90558822193879 9.39745078155508 9.76038554818002 9.95265248384898 5.66040860011844 0.148712546983598 0.146787583644921 0.145864574908791 0.147573486247358 0.150440242781457 0.156269683003575 0.143681015779636 0.151403983132381 0.212178874454848 0.212000196316355 0.144994667680393 0.147429512538998 0.143681015779636 0.150574542459927 0.153335785736726 0.143681015779636 0.159652666809887 0.149004931836959 0.252188086620119 1 1|0 -|/ 21082687 21083788 21083307.5 21082485 21084088 - gene protein_coding_gene FALSE TRUE AT1G56300.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G14200.1); similar to DnaJ-like protein [Glycine max] (GB:AAM23263.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 2.25365911956494 25.672382811756 4.37983805050284e-11 6.88247751256016e-07 13.8619812341679 19.0349426972577 2.25365911956494 0.0556919294455077 AT2G38530_at 5.26484880596722 4.90345513385774 3.34063067083659 3.31774950452547 10.0316873893068 10.1489293108423 3.55637937257909 3.74258851094774 3.81785269605498 8.71035029894654 8.38701678573212 8.73716346766713 8.13439297771669 8.12544315455156 8.76429331048919 5.26900045019872 4.95712688616463 9.65164003194612 3.95875293374602 0.341350668931756 0.341350668931756 0.344429620808470 0.349536137415103 0.364454683036161 0.369197081741226 0.363182048267178 0.36282266757671 0.363106036321160 0.353857852107229 0.341350668931756 0.343757114512290 0.341762866517848 0.341350668931756 0.346375081879594 0.342541768426488 0.344433646274435 0.362909652460213 0.348218736344351 2 2 + 16135576 16135840 16135686.455 16135456 16136236 + gene protein_coding_gene FALSE TRUE AT2G38530.1 LTP2 (LIPID TRANSFER PROTEIN 2); lipid binding Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region.Expressed in flower, leaves and siliques but absent in roots. Identical to Nonspecific lipid-transfer protein 2 precursor (LTP 2) (LTP2) [Arabidopsis Thaliana] (GB:Q9S7I3); similar to LP1 (nonspecific lipid transfer protein 1) [Arabidopsis thaliana] (TAIR:AT2G38540.1); similar to lipid transfer protein [Brassica rapa subsp. pekinensis] (GB:AAT40130.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 2.30026945992447 24.8873960597552 6.10859610953326e-11 9.5984370669096e-07 13.7979175805961 12.1627393920116 2.30026945992447 0.0733287247957095 AT1G49230_at 8.4228341269705 8.62008575428989 8.29020445903013 8.65550218715003 9.45390088610963 9.31022154171384 5.44177532565055 5.28717430199366 2.93998403183991 2.80318583587553 5.01551171906074 5.45341735361682 5.03229896811766 4.94650183976921 6.05169368278154 5.04629302439744 5.68970873461543 5.48816028961459 2.579193144193 0.227898423708005 0.229578270763767 0.227898423708005 0.228747632387927 0.229059494617182 0.228550019981640 0.231264234599180 0.229882119850689 0.239440972639499 0.23174289864317 0.230881042115283 0.227898423708005 0.235679599497077 0.234570552731783 0.233969588038280 0.227898423708005 0.237168152056932 0.230678985860854 0.227898423708005 1 1 + 18213219 18213588 18213418 18212929 18213796 + gene protein_coding_gene FALSE TRUE AT1G49230.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL1L (ATL1L) [Arabidopsis Thaliana] (GB:Q6NQG7;GB:Q9M9C1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G49200.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE81190.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 2.27540854440098 24.0465390523162 8.8244257201925e-11 1.38649376915665e-06 13.7232645506062 11.9924969255966 2.27540854440098 0.0805951567744595 AT1G65390_at 5.07231743493853 5.56311916034476 2.55040598195565 2.51822608006681 2.68847164955729 2.65514634135849 4.89908768181382 4.89581787547089 5.04727329245993 5.87934697040412 3.30715249865768 3.67853849104222 2.75349421007093 3.06359437715441 2.8979892515577 3.86953710038732 2.60344214072179 2.69947943793115 4.57786857508867 0.198184358758019 0.197769211439286 0.18774874833066 0.187850400095914 0.189320053168189 0.190009846181737 0.194096994757410 0.192498833824306 0.197564465560318 0.196418541045551 0.187916238920707 0.188657189495970 0.187448737428758 0.188051496598111 0.187943175482115 0.186378027995112 0.190350367602444 0.191365893454186 0.190406068300028 1 1 + 24296340 24298203 24297316.773 24296141 24298294 + gene protein_coding_gene FALSE TRUE AT1G65390.1|AT1G65390.2 ATPP2-A5; transmembrane receptor similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1); similar to Os01g0158400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042077.1); similar to unnamed protein product [Oryza sativa (japonica cultivar-group)] (GB:BAB08190.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Galactose-binding like; (InterPro:IPR008979)|similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1); similar to TIR; Disease resistance protein [Medicago truncatula] (GB:ABD28631.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) -2.28176626622564 -23.7352154951860 1.01438833429600e-10 1.59370551201244e-06 13.693900425435 7.9939822179006 -2.28176626622564 0.0853149220778714 AT2G14610_at 13.2017457055188 13.4669125952117 13.5605801872181 13.5858117177314 11.6680669854711 11.4518758100631 2.77610752599057 2.61339932748172 3.10683873970318 3.15575902838899 2.31436240343767 2.5799308296297 2.35180622067649 2.10752883528651 2.3973182890694 2.22001741342490 3.81435976125653 2.46198672837686 2.19526944091838 0.336616551040939 0.336565257324506 0.335127421285115 0.336712428596635 0.340853911425000 0.342212180360591 0.329617578522766 0.332701193048319 0.325650590936433 0.327285488632780 0.326819038990868 0.325650590936433 0.326022932564223 0.325650590936433 0.335785084460798 0.330969813683123 0.329715049951949 0.329768687148108 0.325650590936433 2 2 - 6249169 6249483 6249335.909 6248786 6249545 - gene protein_coding_gene FALSE TRUE AT2G14610.1 PR1 (PATHOGENESIS-RELATED GENE 1) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive. Identical to Pathogenesis-related protein 1 precursor (PR-1) [Arabidopsis Thaliana] (GB:P33154); similar to ATPRB1 (Arabidopsis thaliana basic pathogenesis-related protein 1) [Arabidopsis thaliana] (TAIR:AT2G14580.1); similar to pathogenesis related protein 1 [Eutrema wasabi] (GB:BAF03626.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) 2.13183356352239 23.6096338386319 1.07357661622360e-10 1.68658886408728e-06 13.6817762309270 12.9656639217433 2.13183356352239 0.0657067140991357 AT3G55450_at 9.38731559436298 9.35031819823745 8.84823725492147 8.73669437932525 9.22445022926406 9.10372146559085 4.01975913461625 4.00089099191837 3.92319139812911 3.61199976771956 5.3893158530606 6.13109142129424 4.23767500940198 5.4787288770883 5.94504345092272 4.26493244689355 5.49740135410399 5.4047500559147 3.50487142734982 0.197247933176986 0.194669811402604 0.192366053117816 0.193053043094392 0.194049479576590 0.200811935115476 0.200742735626089 0.197687752688263 0.213570936302334 0.195657318803519 0.199382110438244 0.197840008564944 0.192029547935285 0.195389066072080 0.198959404853042 0.193172088802816 0.206881204129697 0.200672092809844 0.199766856763 3 0|3 /|+ 20570544 20570831 20570708.111 20568876 20571189 + gene protein_coding_gene FALSE TRUE AT3G55450.1 protein kinase, putative similar to BIK1 (BOTRYTIS-INDUCED KINASE1), kinase [Arabidopsis thaliana] (TAIR:AT2G39660.1); similar to Os01g0973500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045548.1); similar to protein kinase (GB:AAA18853.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.95115064833858 23.5189031433330 1.11867958959910e-10 1.75733376730122e-06 13.6729143633466 12.3207424925218 1.95115064833858 0.0293387945512947 AT2G21660_at 12.2861779394476 11.9127547931824 11.7855136983266 11.4908611696362 12.4872636003106 12.1831756052807 8.05906003678604 7.64655199470076 7.46480047006452 7.30981731316214 10.5775493560734 10.9416530171660 10.4020177681803 10.769884338854 10.9568375668019 9.87876743658987 10.1499907167450 10.5433249384657 7.77857692767405 0.129663288416150 0.125964753520594 0.125779137486651 0.128939873528976 0.137936597053888 0.130455904488942 0.140113518957085 0.149444593564163 0.149141969251070 0.148665564874642 0.129127044590310 0.128242211479309 0.129250091395346 0.126186452576844 0.128640708726457 0.131569981405891 0.135420685098981 0.129241788350148 0.142918282098697 2 2 - 9272634 9273372 9273027.273 9272329 9273469 - gene protein_coding_gene FALSE TRUE AT2G21660.1|AT2G21660.2 ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding|ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. Identical to Glycine-rich RNA-binding protein 7 (GRP7) [Arabidopsis Thaliana] (GB:Q03250;GB:Q8LEV4;GB:Q94B62); similar to ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8), RNA binding [Arabidopsis thaliana] (TAIR:AT4G39260.1); similar to Glycine-rich RNA-binding protein GRP1A (GB:P49310); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Glycine-rich RNA-binding protein 7 (GRP7) [Arabidopsis Thaliana] (GB:Q03250;GB:Q8LEV4;GB:Q94B62); similar to ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8), RNA binding [Arabidopsis thaliana] (TAIR:AT4G39260.1); similar to Glycine-rich RNA-binding protein GRP2A (GB:P49311); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 2.51016944970929 22.9640079426415 1.44371105998441e-10 2.26778133302352e-06 13.6167807223983 20.0040372110387 2.51016944970929 0.121001889102320 AT3G50970_at 8.33798494537858 8.59679175012395 8.76828844035611 8.90847451952392 9.1007399587905 8.82434875845761 4.62438577931385 5.2344172875163 2.94818190483700 3.13545400312913 5.0495279533193 5.62324468873054 5.81301325999037 6.87618454462176 4.52091786362235 7.09719834403775 7.76642355099469 4.99618878147308 3.55758287441541 0.220778907785521 0.219406714988915 0.227346993509899 0.219406714988915 0.221514985174762 0.224197139751497 0.220596188010483 0.233582633311758 0.234874450332224 0.224708527313503 0.223000543832928 0.222878457447201 0.224471538115580 0.231272199804477 0.228823130989173 0.224502434668883 0.229559222912921 0.225536075012065 0.224027950758661 3 3 + 18951866 18952307 18952066.636 18951758 18952535 + gene protein_coding_gene FALSE TRUE AT3G50970.1 LTI30/XERO2 (LOW TEMPERATURE-INDUCED 30) Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid. Identical to Dehydrin Xero 2 (Low-temperature-induced protein LTI30) (XERO2) [Arabidopsis Thaliana] (GB:P42758;GB:Q41966); similar to dehydrin, putative [Arabidopsis thaliana] (TAIR:AT3G50980.1); similar to dehydrin-/LEA group 2-like protein [Lophopyrum elongatum] (GB:AAC05921.1); contains InterPro domain Dehydrin; (InterPro:IPR000167) 2.47808287896021 22.2021762192525 2.06936957018869e-10 3.25035878389537e-06 13.5339235925991 12.3902174136706 2.47808287896021 0.126597930322199 AT2G18050_at 6.52369258952301 6.68595311138523 8.53797837015755 8.10977170331265 10.5108602314286 10.0723740827462 4.42354851721693 3.82113765765007 1.85786723669192 2.60162833851015 3.90111874860277 5.45301513273842 5.70727346265531 3.6679587711738 3.37598425232362 3.96619869835939 5.71266817251546 3.64950058908508 4.43380195135648 0.272634713917919 0.279515930290745 0.276958963088248 0.276647575476284 0.274186479499480 0.27464522032471 0.272336072504579 0.268395842961825 0.281158101209767 0.273358148765349 0.268144505450775 0.273580742325008 0.275837942044556 0.277967368746233 0.274019432676205 0.273851169991051 0.268144505450775 0.273119800926230 0.276492062908654 2 0|2 /|+ 7853193 7853724 7853480.6 7853005 7853966 + gene protein_coding_gene FALSE TRUE AT2G18050.1|AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. similar to histone H1, putative [Arabidopsis thaliana] (TAIR:AT1G06760.1); similar to histone H1 variant [Lycopersicon chilense] (GB:AAF64525.1); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Histone H5; (InterPro:IPR005819); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|similar to histone H1, putative [Arabidopsis thaliana] (TAIR:AT1G06760.1); similar to histone H1 variant [Lycopersicon chilense] (GB:AAF64525.1); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H1/H5; (InterPro:IPR005818) 2.70447267377317 22.0918594905498 2.18225549719304e-10 3.42745048389140e-06 13.5213319318404 11.0324881515698 2.70447267377317 0.151347001325734 AT4G10500_at 9.54062220946008 9.9603593766677 11.3475186134501 11.4744306036838 9.58310173086407 9.2736732753751 0.822273066126265 0.866554331827794 3.50353694217896 1.25472921808242 1.11833630929077 1.05698609163389 1.71925723076223 1.26860575347084 0.602400318156993 1.73321871381123 1.56312385776158 1.50068777581324 1.48837272509674 0.279141587199640 0.277205485191688 0.272670565457180 0.274606923549818 0.280482463348471 0.279567875144349 0.258425773637652 0.258425773637652 0.270128870183495 0.258595331861026 0.269183007679256 0.259508877513667 0.267336583452226 0.259185821680862 0.261972869601721 0.258425773637652 0.263450223672657 0.271117106689941 0.260260586046855 4 4 + 6491663 6492299 6492040.909 6491013 6492472 + gene protein_coding_gene FALSE TRUE AT4G10500.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to Os04g0581100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053652.1); similar to H0303A11-B0406H05.3 [Oryza sativa (indica cultivar-group)] (GB:CAH67943.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 2.18017142718718 22.0696543864336 2.20577957651601e-10 3.46417682491840e-06 13.5187784857788 9.55983663499368 2.18017142718718 0.0931916223815415 AT3G56710_at 9.65214276254548 9.99103360907238 10.1523287370652 10.3495483676779 9.77427530294402 9.5254787292510 3.72856021270253 4.02297765994855 7.45010373716645 3.83336813327697 6.79090501046103 7.06243119248259 5.66039039820979 7.46499282574812 5.71019073036298 6.32952180815167 6.99903039784623 7.42998596336268 4.90223331951991 0.259951791841775 0.259951791841775 0.259951791841775 0.259951791841775 0.261595600779352 0.261092378950345 0.266557681064483 0.276999989624917 0.261558199430062 0.266762387543444 0.259951791841775 0.262904828800563 0.263480190630419 0.260897863600161 0.259951791841775 0.267850650664935 0.266888680034625 0.259951791841775 0.271830246260371 3 3 - 21018086 21018460 21018249.727 21017729 21018544 - gene protein_coding_gene FALSE TRUE AT3G56710.1 SIB1 (SIGMA FACTOR BINDING PROTEIN 1); binding Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts. similar to sigA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G41180.1); similar to VQ [Medicago truncatula] (GB:ABE93011.1); contains InterPro domain VQ; (InterPro:IPR008889) 2.19371260033715 22.0538609642059 2.22267929331445e-10 3.49049556222101e-06 13.5169584537747 14.4376262247255 2.19371260033715 0.0951523655358528 AT1G21520_at 7.81742823179312 8.32619102090833 9.38857268772455 9.31803011918885 9.04920249486727 8.50933481372324 2.76058510226268 3.30890385381184 6.25503278846668 3.78025425050136 7.04365906692799 8.19276761256147 6.43587861237318 6.25135565678089 7.26063077835756 6.43126731033698 5.73393058863901 7.77910791017224 4.50032642841578 0.388791882222519 0.388791882222519 0.388791882222519 0.388791882222519 0.388791882222519 0.388791882222519 0.396157822890775 0.406144149680685 0.388791882222519 0.402297825371389 0.388791882222519 0.388791882222519 0.388791882222519 0.390284750648164 0.397778262727824 0.388791882222519 0.391326583297463 0.388791882222519 0.394030991486826 1 1 - 7534535 7534635 7534582.5 7534522 7534722 - gene protein_coding_gene FALSE TRUE AT1G21520.1 unknown protein 2.77943908978636 21.9808879960673 2.30261783535563e-10 3.61580078685895e-06 13.5085068619709 13.1779206311083 2.77943908978636 0.160103755047947 AT1G66100_at 11.9322649545901 12.1891864579261 8.51425836848633 8.81022244730822 9.10022099036216 8.76317795825268 12.8544687214657 12.9937426316114 13.1418941758578 13.2472172957759 12.6694461712648 13.0707957920504 13.2268889644827 12.8639898001231 12.0258875559937 12.7035204073486 11.6821192901113 12.7464280967167 13.3870310037106 0.0885333221497122 0.0856519230472216 0.106109580453512 0.102718241004893 0.093864031162581 0.104202951655540 0.0883761838239716 0.0862748699228861 0.0932313168276047 0.0873976069949868 0.0873688490499009 0.0856519230472216 0.0864157447019019 0.090899456812524 0.0882960437479943 0.0856519230472216 0.0922677107136773 0.0856519230472216 0.0865344503554723 1 1|0 -|/ 24609552 24610044 24609863.9 24609334 24610200 - gene protein_coding_gene FALSE TRUE AT1G66100.1 thionin, putative Identical to Probable thionin-2.4 precursor [Contains: Probable thionin-2.4; Acidic protein] [Arabidopsis Thaliana] (GB:Q9C8D6); similar to THI2.2 (THIONIN 2.2), toxin receptor binding [Arabidopsis thaliana] (TAIR:AT5G36910.1); similar to thionin (GB:AAC41679.1); contains InterPro domain Thionin; (InterPro:IPR001010) -2.16526269949132 -21.9608195794804 2.32514747926009e-10 3.65094657193419e-06 13.5061703490091 23.5858671503551 -2.16526269949132 0.092644652622384 AT2G40750_at 10.265772142298 10.3263359796739 10.5177237006226 10.5643351434801 8.33517289023288 8.40605509399722 3.46797762138123 3.34645553864742 8.07916722100214 3.35922914231621 6.73321889526472 7.27321079261113 5.0735112148127 7.80024765014484 4.39428579063339 5.29599402889085 5.18204977331085 7.93128154553724 4.1203726802126 0.234310719565489 0.234047189608346 0.236134377497259 0.234682101172942 0.23100017753884 0.23784271987338 0.233091943659463 0.241813162830519 0.239947541050253 0.236428512752881 0.232115770971613 0.232573771135182 0.240097554878581 0.23100017753884 0.237447839285169 0.231229797147676 0.235544609395563 0.232474315610654 0.233441932986226 2 2 - 17007759 17008201 17007981.909 17007532 17009546 - gene protein_coding_gene FALSE TRUE AT2G40750.1 WRKY54 (WRKY DNA-binding protein 54); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 54 (WRKY DNA-binding protein 54) (WRKY54) [Arabidopsis Thaliana] (GB:Q93WU8); similar to WRKY70 (WRKY DNA-binding protein 70), transcription factor [Arabidopsis thaliana] (TAIR:AT3G56400.1); similar to elicitor-induced DNA-binding protein homolog [Matricaria chamomilla] (GB:BAA87069.2); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.81420250007006 21.9227383855206 2.36856245101215e-10 3.71887990433417e-06 13.5017220641787 13.8520941684138 1.81420250007006 0.0277063210420030 AT2G27420_at 2.48813016608019 2.53279289464733 2.42721483806561 2.39341362839611 2.15553210409893 2.32644088248070 9.18452491763379 8.97877108589041 4.21579140160073 5.27655045773951 4.03588460163611 4.24162414965832 5.01356245825813 4.73554103205853 4.26598034107336 6.12605209712156 5.22102872431009 4.67924234912918 5.55771067596803 0.312045941015251 0.28506136595475 0.293059000136137 0.297108774309131 0.28507464972094 0.287143854401290 0.326651870495280 0.328219143761893 0.29183919700897 0.299836333449262 0.285506871545031 0.28506136595475 0.28506136595475 0.290100734268016 0.28506136595475 0.303186939233996 0.2990664940286 0.28506136595475 0.298173201631679 2 2 - 11733560 11733941 11733740.727 11733222 11734692 - gene protein_coding_gene FALSE TRUE AT2G27420.1 cysteine proteinase, putative similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G49340.1); similar to cysteine proteinase precursor [Ipomoea batatas] (GB:AAL14199.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) -1.84861205604151 -21.5067230800546 2.90494269580088e-10 4.56076003240738e-06 13.4518534726530 8.96412688845751 -1.84861205604151 0.0472923064949465 AT2G04160_at 6.50158535152148 6.99108843657158 3.69290154980456 3.45283354886109 3.71846999495844 3.60329219157941 6.51071367777368 6.18297997729206 5.37986261978269 5.03994663489338 3.12234339575787 4.12299681952346 3.05859837365167 3.11697100339992 4.42195656006551 3.89462227963318 3.49075256459017 3.51785363357235 5.19377951272319 0.237559615322723 0.227984674888713 0.229435354828018 0.221238786917346 0.221269907014135 0.227605713255323 0.224825441687276 0.246693670965596 0.231348968609307 0.224128349283224 0.222075942937763 0.221260898913694 0.237319297214667 0.225882727786617 0.221238786917346 0.224182998990751 0.230416890235110 0.235964082969425 0.228060800335269 2 2 - 1401610 1402294 1401935 1401273 1407742 - gene protein_coding_gene FALSE TRUE AT2G04160.1 AIR3 (Auxin-Induced in Root cultures 3); subtilase isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59810.1); similar to subtilisin-like protease [Triticum aestivum] (GB:CAJ75644.1); similar to subtilisin-like protease [Glycine max] (GB:AAQ23176.1); similar to putative subtilisin-like proteinase [Oryza sativa (japonica cultivar-group)] (GB:BAD35630.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -2.27049264992382 -21.4857759209432 2.93524755482635e-10 4.60804513632188e-06 13.4492793565793 9.48062879999896 -2.27049264992382 0.111874348601354 AT1G01060_at 8.4178727449154 8.92046092042225 6.08124149006185 6.52050513152252 4.95395964268952 6.06655698903061 10.2443091039108 10.5178596505997 9.84596700501523 10.0367421409878 6.91338681609888 7.47018407755012 7.07797716856698 7.49164993908654 5.48100632388683 8.30991487761654 6.05815741041896 6.3104467916084 10.0789875176801 0.228197838830086 0.228197838830086 0.232465031412987 0.236592351789317 0.228354423051079 0.237798923066655 0.233815938140536 0.238444524910888 0.233271035889296 0.230040135725645 0.230306019139558 0.236615629364676 0.228329989511684 0.233109897165061 0.241176410309473 0.228197838830086 0.245118484162831 0.240982847919909 0.236286408036206 1 1|0 -|/ 34174 34636 34419 33379 37840 - gene protein_coding_gene FALSE TRUE AT1G01060.1|AT1G01060.2|AT1G01060.3|AT1G01060.4 LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor|LHY (LATE ELONGATED HYPOCOTYL); DNA binding|LHY (LATE ELONGATED HYPOCOTYL) myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 similar to CCA1 (CIRCADIAN CLOCK ASSOCIATED 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G46830.1); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -3.35885079362972 -20.8616677704246 4.01697154652994e-10 6.3058419337427e-06 13.3696608996595 16.15350703256 -3.35885079362972 0.229468799178338 AT4G02380_at 11.1568716275963 11.1100394802243 11.9170154186863 11.8886846949143 10.6931140026027 10.2043071040591 3.98438014340497 3.49445955156458 7.94672962244543 5.2420155584746 6.7932572348822 7.86193446743797 5.21255812705832 6.94023979757048 6.34517762541118 7.17845812323658 6.7521897720289 7.07102021082448 4.78494700998709 0.282929296047522 0.282388364527811 0.290645656503882 0.285090753912875 0.281146866687272 0.286285138226696 0.280388679784883 0.276038287954398 0.291880285232875 0.282876786228551 0.276038287954398 0.277202579995273 0.281028920986396 0.276038287954398 0.286074551835337 0.276038287954398 0.287377735989300 0.276038287954398 0.276038287954398 4 4|0 -|/ 1046445 1046783 1046600.889 1046204 1046997 - gene protein_coding_gene FALSE TRUE AT4G02380.1|AT4G02380.2 SAG21 (SENESCENCE-ASSOCIATED GENE 21) Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses. similar to late embryogenesis abundant 3 family protein / LEA3 family protein [Arabidopsis thaliana] (TAIR:AT1G02820.1); similar to protein induced upon tuberization [Solanum demissum] (GB:CAA66948.1); contains InterPro domain Late embryogenesis abundant protein 3; (InterPro:IPR004926)|similar to late embryogenesis abundant 3 family protein / LEA3 family protein [Arabidopsis thaliana] (TAIR:AT1G02820.1); similar to late embryogenesis abundant protein 5 [Populus suaveolens] (GB:ABF29697.1); contains InterPro domain Late embryogenesis abundant protein 3; (InterPro:IPR004926) 2.25873314693599 20.7302239683385 4.29626869864216e-10 6.7438529762586e-06 13.3521430670253 15.6864015779359 2.25873314693599 0.120139110758162 AT1G62480_at 8.9150839368791 8.85824246473729 9.99535159322872 9.91437947895866 10.8816631280786 10.8984014767105 9.4337941379844 9.51911973642855 8.61899698834293 7.5685719542062 10.9900311091572 10.5917962411386 10.2637107387146 10.4662986615229 10.7441980414189 10.3373847078316 9.96963734408112 10.7602742716115 8.95103711586676 0.115887870624779 0.111970859006987 0.112049796797491 0.108187133370995 0.113703180777297 0.113475843867527 0.109863512280743 0.107014542352385 0.118534944800504 0.143119082244671 0.107461886486587 0.108888961076025 0.107014542352385 0.108731506284924 0.107714796205071 0.107014542352385 0.11374332617111 0.107598441640681 0.117889859900081 1 0|1 /|+ 23132775 23133176 23132938.2 23132370 23133424 + gene protein_coding_gene FALSE TRUE AT1G62480.1 vacuolar calcium-binding protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12080.2); similar to vacuolar calcium binding protein [Raphanus sativus] (GB:BAA99394.1); contains domain UNCHARACTERIZED (PTHR22683:SF22); contains domain SPORULATION PROTEIN RELATED (PTHR22683) 1.68838494343302 20.5395949404608 4.73962681175305e-10 7.43931824372759e-06 13.3262522432183 19.2494803652456 1.68838494343302 0.0227933859740342 AT4G35060_at 4.80355051602395 5.55317885685263 9.33479294225156 9.30380442813494 9.43449293142483 8.8470410226902 8.50875097672175 7.9981643365683 3.21059850731748 5.32109726082354 8.36392552629638 6.22786130529836 9.21861687612669 8.46920755395312 5.13772126139043 8.39416976024573 9.42227257144294 7.53118226139985 5.60525097485877 0.225134813082691 0.210000692671398 0.203680283334522 0.201046904016077 0.203407817454538 0.20559559842565 0.204907909606307 0.210234924100298 0.223157863455865 0.219058481702837 0.203256550698564 0.209201230812421 0.221725383246170 0.2104896204505 0.210907680851528 0.204290020623247 0.203166884847758 0.207586407573012 0.210942645217862 4 4 - 16685907 16686394 16686061.545 16685725 16686708 - gene protein_coding_gene FALSE TRUE AT4G35060.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to ATFP6 (FARNESYLATED PROTEIN 6), metal ion binding [Arabidopsis thaliana] (TAIR:AT4G38580.1); similar to GMFP7 [Glycine max] (GB:AAD09515.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 2.82371285905149 20.2561311872240 5.49378345028645e-10 8.62249312522458e-06 13.2866582133648 14.2519396115931 2.82371285905149 0.187083329354155 AT1G19250_at 1.65610069829597 2.01918188572516 8.95344226941239 8.81938537203884 1.08072864865792 1.45974563160414 0.547937714049028 0.572283048134857 0.650114654322988 0.363376793081364 0.332975274346418 0.611956455512973 0.787023154048739 0.359376361394255 0.723171977630228 0.301173709193759 1.01189861862218 0.868656123574644 0.556231289627096 0.249500794569060 0.256318222658476 0.249398378732036 0.263337368033654 0.236460332861937 0.236460332861937 0.236460332861937 0.236460332861937 0.244796225531191 0.241377766018535 0.247101484243625 0.244920394328025 0.237565152510166 0.241294396587375 0.242124170912952 0.239378912365853 0.236460332861937 0.256360659354032 0.238211028767239 1 1 - 6650676 6651265 6650929.364 6650520 6653069 - gene protein_coding_gene FALSE TRUE AT1G19250.1 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); monooxygenase FMO1 is required for full expression of TIR-NB-LRR?conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. Identical to Probable flavin-containing monooxygenase 1 (EC 1.14.13.-) (FMO1) [Arabidopsis Thaliana] (GB:Q9LMA1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT5G45180.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65447.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Flavin-containing amine oxidase; (InterPro:IPR001613); contains InterPro domain Amine oxidase; (InterPro:IPR002937) 1.99036884541183 20.10239664206 5.95674500924239e-10 9.348515617505e-06 13.2646198079666 3.7124855943069 1.99036884541183 0.0938405998901862 AT4G37370_at 5.74602728088851 6.340118711927 9.34842507729551 9.56940544645534 6.51259401721098 6.4950309226723 2.51260229766523 2.55487237343412 3.70511501157433 3.08943772178817 4.14767296323751 4.13249367329963 3.50295755977454 4.41134307410011 3.18305651654342 3.95524645467861 4.09733253135871 4.28003002416599 3.52363217360994 0.266202226984731 0.263106400270053 0.265368333270025 0.271486610731387 0.275507894804465 0.264630846471621 0.265180107906097 0.274723756561149 0.264691828416479 0.268022746050907 0.264511547579072 0.261703846121357 0.261703846121357 0.263587196796757 0.268777423180261 0.263696552533207 0.267657625081071 0.266916796689637 0.261703846121357 4 4 - 17569982 17570537 17570243.727 17569822 17571698 - gene protein_coding_gene FALSE TRUE AT4G37370.1 CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8); oxygen binding member of CYP81D similar to CYP81D2 (cytochrome P450, family 81, subfamily D, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37360.1); similar to CYP81D5 (cytochrome P450, family 81, subfamily D, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37320.1); similar to CYP81D3 (cytochrome P450, family 81, subfamily D, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37340.1); similar to Cytochrome P450 81E1 (Isoflavone 2'-hydroxylase) (P450 91A4) (CYP GE-3) (GB:P93147); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 2.10866516529191 20.0940351638306 5.98311610822054e-10 9.3893041086305e-06 13.2634095126249 9.83646530026144 2.10866516529191 0.109977862310734 AT2G36490_at 4.58179620744969 5.42043665208251 6.7418978959396 7.33201191345184 8.02201580505128 7.48300991460951 4.16398181889111 3.95492913860794 4.42163502578409 4.45920166566185 7.23951828161599 7.27068209524571 7.60455263418889 7.71185060876763 6.68755160149375 8.02211835712435 7.0793879823831 7.78679988825733 4.19298323560876 0.224135600032843 0.21970292016072 0.231134969949048 0.219368535098043 0.217780995772179 0.224288655627970 0.221950788203980 0.220041902489001 0.218669267907062 0.222022264323634 0.215235946658035 0.215520959524575 0.222035707628329 0.219928084851100 0.215235946658035 0.218997038451152 0.221211321958319 0.215235946658035 0.216796162161401 2 2|0 -|/ 15316018 15316835 15316467.111 15315100 15321351 - gene protein_coding_gene FALSE TRUE AT2G36490.1 ROS1 (repressor of silencing1) A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. Identical to Protein ROS1 (EC 3.2.2.-) (Repressor of silencing 1) (DEMETER-like protein 1) (ROS1) [Arabidopsis Thaliana] (GB:Q9SJQ6;GB:Q7Y1X6); similar to HhH-GPD base excision DNA repair family protein [Arabidopsis thaliana] (TAIR:AT3G10010.1); similar to DME (DEMETER) [Arabidopsis thaliana] (TAIR:AT5G04560.2); similar to Os01g0217900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042408.1); similar to putative endonuclease III protein [Ipomoea trifida] (GB:AAS79601.1); contains InterPro domain Iron-sulfur cluster loop; (InterPro:IPR003651); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265) 2.96590781672747 20.0773742986315 6.03604256052076e-10 9.47175798596918e-06 13.2609942946464 11.8541337466702 2.96590781672747 0.203718692023200 AT1G59930_at 5.93924971086924 6.0339482242812 3.30105066783612 3.95699471661445 4.40263458706319 3.84261469626542 7.0502940109922 6.34128760967702 5.57420565658844 7.00775428943973 3.24354628561623 2.37453471068504 3.11505291432171 4.29829273975221 2.88166859236379 3.27454466134281 3.61484970102123 2.91490017542489 6.85860214386264 0.582312911610962 0.480452979185415 0.480452979185415 0.480452979185415 0.480452979185415 0.508953429910014 0.480452979185415 0.490364298916732 0.508049320574721 0.529278478665006 0.500375766922311 0.480452979185415 0.480452979185415 0.480452979185415 0.491379095294569 0.480452979185415 0.480452979185415 0.484484365294591 0.492775690477471 1 1 - 22064797 22064828 22064812.333 22064748 22065146 - gene protein_coding_gene FALSE TRUE AT1G59930.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G59920.1); contains domain MADS BOX PROTEIN (PTHR11945); contains domain MADS BOX PROTEIN (PTHR11945:SF14) -2.86544243137053 -20.0677573139496 6.06682483084599e-10 9.51945484208044e-06 13.2595979874670 9.95593982088132 -2.86544243137053 0.193909488965696 AT2G16720_at 5.67779642027958 5.75532808971883 7.08696990749664 6.60450975451895 7.70396092058999 7.20532199874008 3.55720032365175 3.73803058402507 2.63119240645414 2.80350403501049 4.74308787732761 4.32325793851357 5.12824702358583 4.30430847625996 4.19897518593538 5.6679055798875 5.25318230780792 4.51426476449943 3.05542893342427 0.271830270768528 0.270719244534506 0.28108201270722 0.278728763947494 0.27930161389446 0.278874359194437 0.267526588333415 0.278821373705337 0.270994180345189 0.277575794888621 0.270902973100944 0.271555670102148 0.272932914518784 0.277060908753332 0.272393382165459 0.267526588333415 0.267526588333415 0.271812149146116 0.273172336422189 2 2|0 -|/ 7262761 7263377 7263063.3 7262616 7263662 - gene protein_coding_gene FALSE TRUE AT2G16720.1 MYB7 (myb domain protein 7); DNA binding / transcription factor Encodes a member of MYB3R- and R2R3- type MYB- encoding genes similar to AtMYB32 (myb domain protein 32), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34990.1); similar to GHMYB9 [Gossypium hirsutum] (GB:AAK19619.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 2.20235682175756 19.8643204707771 6.75976194342715e-10 1.06060664892372e-05 13.2296797594040 9.714487467806 2.20235682175756 0.124805808939719 AT1G55260_at 8.14785788378196 8.43906350882582 3.70564628932188 3.75302808036622 5.37196473414414 4.79146378943074 10.0373477669444 9.94288384112963 8.4823354190885 9.42324143620114 10.0015654424387 10.2269718008407 9.8257837676275 9.48877468294975 9.98824393694043 8.55830289581432 8.22853529525262 9.39879422497156 8.95659764405978 0.206160465555143 0.201478710504177 0.226334125260131 0.229208816241255 0.232659311049981 0.223859554462799 0.202753723314616 0.199273075402836 0.215933230687403 0.203058645379978 0.199273075402836 0.199273075402836 0.199273075402836 0.199273075402836 0.200914738363132 0.199978736756109 0.217986445154871 0.206603092621216 0.204799725087797 1 1|0 +|/ 20618474 20619795 20618897.8 20618416 20620102 + gene protein_coding_gene FALSE TRUE AT1G55260.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid transfer protein-related [Arabidopsis thaliana] (TAIR:AT2G44300.1); similar to Protease inhibitor/seed storage/LTP family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94168.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -2.11284959372504 -19.8474951961801 6.82081879542072e-10 1.07011826081356e-05 13.2271724219386 15.9829968228952 -2.11284959372504 0.113868197497863 AT3G45970_at 4.0176602747306 4.80112708393559 6.688136988682 6.71486185072151 7.44618110082355 7.77713274301421 4.61211334442986 4.83575895621973 7.27135742617285 5.07285736623582 10.8828616396344 7.71661808583642 9.61674482569916 10.0015988847901 7.52255993867823 6.7863635762101 6.76241512522844 8.47092675164221 6.37295435518087 0.245049674678563 0.248800826357699 0.242756040802151 0.252794038458569 0.24824032991307 0.251704488390976 0.246445294708511 0.247742210270502 0.261551195148771 0.243670801043226 0.253563166816529 0.242756040802151 0.245383362867121 0.248751728935194 0.242756040802151 0.243200153034186 0.255577874047391 0.246517847709203 0.247275337236483 3 3 + 16907540 16908138 16907941.091 16907151 16908293 + gene protein_coding_gene FALSE TRUE AT3G45970.1 ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-like A1 precursor (AtEXLA1) (AtEXPL1) (At-EXPL1) (Ath- ExpBeta-2.1) (EXLA1) [Arabidopsis Thaliana] (GB:Q9LZT4); similar to ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2) [Arabidopsis thaliana] (TAIR:AT4G38400.1); similar to expansin-like protein [Quercus robur] (GB:CAE12163.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795) 2.41043398845821 19.6236028033699 7.6931295077067e-10 1.20689815716903e-05 13.1933174829709 13.216155285817 2.41043398845821 0.152256715933243 AT1G22990_at 3.54787355680093 3.5483255914382 5.83087900497427 6.02464487437134 7.05267354744325 7.2080168986093 2.68876955670335 2.41331523886217 2.87639971290903 3.26736526320455 2.86256435338050 2.90280363548891 3.33174730596466 2.962138938152 2.58526048419441 3.03961219304975 3.74513988700301 3.27580355735807 3.09107082074128 0.301582429989608 0.299108955690815 0.322087770148221 0.329457131152245 0.32447844976582 0.313368814858639 0.292386892402195 0.292386892402195 0.292386892402195 0.292386892402195 0.302616777383404 0.296183725445211 0.293853395445061 0.300098614689415 0.296318238617040 0.296522993439428 0.298406898285294 0.298017451887383 0.30784702288706 1 1 + 8139210 8139974 8139686.455 8139154 8140191 + gene protein_coding_gene FALSE TRUE AT1G22990.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to putative farnesylated protein [Brassica rapa subsp. pekinensis] (GB:AAN23108.2); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.74466889538534 19.4086792557825 8.64591938302981e-10 1.35628537361589e-05 13.1599410551462 7.87251848028812 1.74466889538534 0.0641825323894157 AT1G07430_at 5.57704110767083 5.22346222958084 7.78740889858507 7.5709927675211 7.84241464221159 7.77520146066738 5.88262359747701 6.28420652558516 3.0924763203916 4.01385457219969 4.75727547785336 3.78623733050997 6.45179716225905 5.12512187297151 4.16318976383394 4.79139937991928 7.47199656036654 5.34861243309404 2.82678070012387 0.239021282782885 0.23998517443993 0.246457848128371 0.24373375084065 0.25088145559713 0.24057140338887 0.238593058781011 0.243723436383608 0.252743166533139 0.243090643969213 0.237958743925208 0.244603859136588 0.237958743925208 0.240195522772758 0.238846307713815 0.23973892362465 0.248087896074469 0.249799325343936 0.255073242225297 1 1|0 -|/ 2281175 2281802 2281481.5 2280832 2282825 - gene protein_coding_gene FALSE TRUE AT1G07430.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G29380.1); similar to protein phosphatase 2C [Nicotiana tabacum] (GB:CAC10358.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.96404381359854 19.3680816861304 8.83994114439233e-10 1.38663316790938e-05 13.1535375560732 11.0169143762487 1.96404381359854 0.100556587568047 AT3G04070_at 6.86246321446599 7.60667295316454 8.8836019104874 8.73814477313675 8.78700127914214 8.69006279717342 2.25591103553978 2.16294922267654 1.98047377680541 2.52360596592355 2.51511554015962 2.27905491775385 2.90575421838729 2.6876919912124 1.35098823995366 1.74365677237713 3.53697061438005 2.2872747548814 1.66350358006978 0.264336586179734 0.257020994668923 0.259464063074405 0.25459065798903 0.25877380907061 0.269888709726233 0.249197700239399 0.257819831274187 0.258584911654019 0.251273271868477 0.249197700239399 0.251516119500146 0.256029318671759 0.249197700239399 0.266270719138932 0.249197700239399 0.266687465841926 0.257825891667788 0.271576326710992 3 3 - 1061586 1062080 1061851.4 1061533 1063110 - gene protein_coding_gene FALSE TRUE AT3G04070.1 ANAC047 (Arabidopsis NAC domain containing protein 47); transcription factor similar to NAM (Arabidopsis NAC domain containing protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G52880.1); similar to NAC domain protein [Cymbidium hybrid cultivar] (GB:BAF36563.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 2.20507792853090 19.2695337353136 9.33093921088392e-10 1.46355781522714e-05 13.1378603257822 8.98293814259219 2.20507792853090 0.133268370978452 AT1G19180_at 9.79771396725 9.99621707052528 9.1557633430242 9.12699711518403 8.79686391925367 8.78060514039655 6.76220179480954 7.03751471696376 5.13494154760211 4.57013143421408 7.55062353123585 7.12691523206326 7.24183232808402 7.23576396656338 7.31853280735823 6.94957605338884 6.47725778798801 6.91211764844833 3.14871103883388 0.215118400927576 0.214597180812152 0.21127172023995 0.209507805814903 0.208246331587223 0.213059291362592 0.215083543365105 0.212998424346294 0.223639908509167 0.22461508618457 0.209524210817559 0.208246331587223 0.221770887876366 0.208246331587223 0.210371910860648 0.212114543785112 0.219047624118142 0.219394283954333 0.224235216993898 1 1 + 6622663 6623232 6622885.818 6622085 6623611 + gene protein_coding_gene FALSE TRUE AT1G19180.1|AT1G19180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74950.1); similar to PnFL-2 [Ipomoea nil] (GB:AAG49896.1); contains InterPro domain ZIM; (InterPro:IPR010399)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74950.1); similar to PnFL-2 [Ipomoea nil] (GB:AAG49896.1); similar to Os07g0615200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060268.1); contains InterPro domain ZIM; (InterPro:IPR010399) 1.69181411895934 19.0993306586566 1.02503841055202e-09 1.60767024310980e-05 13.1103327264335 14.3748206798965 1.69181411895934 0.0590145661970273 AT1G64390_at 7.73253395515183 7.74413262111152 2.99910768474332 2.98010205784856 5.34949880473972 5.21992970222513 9.2126263306071 9.35332474908405 8.09739252529257 8.36482413702439 9.81141090247656 10.7624978988076 9.32144863915278 9.36411337993725 10.5437252265792 9.52180384901676 7.81117688592884 9.79704557685312 8.80235600550824 0.191290955963578 0.179278967075559 0.193460067914654 0.187885916684986 0.190233759601853 0.206351867102025 0.176201494762119 0.180840194031523 0.204218195321123 0.187352597792714 0.177156354278619 0.17879652625776 0.182315485867178 0.184103661745857 0.185194532877228 0.177760204401725 0.193007878197679 0.17962752510693 0.186397288982643 1 1|0 +|/ 23917560 23918281 23917857.111 23914782 23918892 + gene protein_coding_gene FALSE TRUE AT1G64390.1 endo-1,4-beta-glucanase, putative / cellulase, putative Identical to Endoglucanase 6 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 6) [Arabidopsis Thaliana] (GB:Q42059;GB:Q8H160;GB:Q9C7W3); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT4G11050.1); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT1G48930.1); similar to glycosyl hydrolase family 9 protein [Arabidopsis thaliana] (TAIR:AT2G32990.1); similar to cellulase [Fragaria x ananassa] (GB:AAC78298.2); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAB43938.1); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAC94006.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Glycoside transferase, six-hairpin, subgroup; (InterPro:IPR012343); contains InterPro domain Glycoside hydrolase, family 9; (InterPro:IPR001701) -1.58918313968191 -19.0293188075118 1.06568551422267e-09 1.67131459195541e-05 13.0988405866223 15.3429954969151 -1.58918313968191 0.0333236696499155 AT1G33960_at 7.26919165677788 7.49534848964165 9.6278735027124 9.46227839611228 6.2388725343514 6.43305978730153 1.25837242232029 1.36616690636795 1.53518780848981 2.29360803456013 1.5850558184902 1.12488905296807 1.87626743091114 1.63511980204253 1.31806992595106 1.67181230574711 1.86808448897152 1.52430556384775 1.49407836758943 0.26688185329717 0.251139218604400 0.253696080102467 0.249379450180682 0.255906977113041 0.273587080169304 0.246800585152243 0.241161428536661 0.246862506212434 0.246139787094208 0.245328804793580 0.247447054169271 0.244832609497300 0.246128394707754 0.244877220065374 0.244178680069873 0.240786598751929 0.244410623892072 0.242737626315757 1 1|0 +|/ 12347314 12348128 12347625.6 12346212 12348474 + gene protein_coding_gene FALSE TRUE AT1G33960.1 AIG1 (AVRRPT2-INDUCED GENE 1); GTP binding Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 Identical to Protein AIG1 (AIG1) [Arabidopsis Thaliana] (GB:P54120); similar to avirulence-responsive family protein / avirulence induced gene (AIG1) family protein [Arabidopsis thaliana] (TAIR:AT1G33950.1); similar to NTGP4 [Nicotiana tabacum] (GB:AAD09518.1); contains InterPro domain AIG1; (InterPro:IPR006703) 1.69720516570609 19.0060874370522 1.07955842097387e-09 1.69296351577123e-05 13.0950052125085 7.81876643802949 1.69720516570609 0.061889001201527 AT1G69890_at 7.66821618286848 7.66942830020226 7.63622777946613 7.69895838112063 8.67491687823097 8.75976544375026 5.32986472532583 5.5027983525758 5.2173550268253 4.82656363900922 6.92884793439739 6.88978391608499 6.99952739607214 6.87284829705256 6.49425138841154 6.65032434025673 6.72153756010138 5.8658684390077 5.47024681746329 0.253589668691328 0.253589668691328 0.254173814412298 0.258410411537654 0.265391863734214 0.262383995314597 0.257479604071554 0.275356639197227 0.263894947038239 0.257948208170785 0.26444736960406 0.26138387803507 0.262399924813088 0.253589668691328 0.257720915436626 0.253589668691328 0.254276864098010 0.263186540137979 0.259079667081665 1 1|0 -|/ 26327128 26327906 26327503.3 26326774 26328267 - gene protein_coding_gene FALSE TRUE AT1G69890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27100.1); similar to Cytosolic fatty-acid binding; Actin-crosslinking proteins [Medicago truncatula] (GB:ABE82702.1); contains InterPro domain Protein of unknown function DUF569; (InterPro:IPR007679); contains InterPro domain Actin-crosslinking proteins; (InterPro:IPR008999) 1.57818769744468 18.8388383964254 1.18543526085573e-09 1.85888103254787e-05 13.0670646559825 13.2921530821204 1.57818769744468 0.0350588060793385 AT2G43570_at 10.0667303396190 9.96312622796976 11.8710298505280 11.9395099836658 10.7309850393324 10.3382324013219 3.26959269658171 3.17363933346471 4.21649536083571 2.87531419624591 1.97037728976031 1.52298902877285 2.15428085207057 2.08383976504363 2.31444610396910 2.12340550510056 3.01195147205136 2.12539641687826 2.78025526883132 0.28147082152065 0.289554955821356 0.285916027836628 0.285098072321969 0.286356354855579 0.281242453423278 0.279943712981766 0.283529975691608 0.286507529556287 0.28633897255253 0.281319436947245 0.28285846193837 0.280535170358147 0.278347756782528 0.280650750404353 0.281248237168857 0.284125440568419 0.289618700872436 0.280283724426453 2 2 - 18083538 18084253 18083811.636 18083301 18084540 - gene protein_coding_gene FALSE TRUE AT2G43570.1 chitinase, putative similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT2G43590.1); similar to chitinase class 4-like protein [Brassica napus] (GB:AAK62047.1); contains InterPro domain Chitin-binding, type 1; (InterPro:IPR001002); contains InterPro domain Glycoside hydrolase, family 19; (InterPro:IPR000726) 1.73715734910237 18.8029345659964 1.20960845651958e-09 1.89666605982271e-05 13.0609904431216 11.6461177738155 1.73715734910237 0.0731931264942093 AT4G18970_at 4.74757763109542 5.37333585646004 1.94951738528426 2.00543884379553 2.05046054521002 2.31769552525087 5.56757616996831 5.71294862488816 8.139140843226 6.84320439303591 7.54110084016462 8.76273832268424 6.76950404383561 6.76223347725487 8.61940492790296 7.76015640386641 3.33768180177448 6.77826194300232 8.45960988381988 0.319803751254908 0.324832773125551 0.346580896292077 0.350203205853156 0.34507496614666 0.336889556601854 0.319803751254908 0.319803751254908 0.324449456407177 0.326293276659434 0.319803751254908 0.320790247471946 0.319803751254908 0.322394908258858 0.319803751254908 0.319803751254908 0.32973063739836 0.326687544967996 0.319803751254908 4 4|0 -|/ 10389327 10390073 10389682.1 10389122 10390928 - gene protein_coding_gene FALSE TRUE AT4G18970.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G45670.1); similar to GDSL-lipase protein [Capsicum annuum] (GB:AAX20033.1); similar to GDSL-lipase 1 [Capsicum annuum] (GB:AAZ23955.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -2.02109065784219 -18.5037878648597 1.43321434590871e-09 2.24713677295026e-05 13.0093068145292 11.1432539527881 -2.02109065784219 0.120797640817692 AT2G19930_at 2.38050320477222 2.49926335522148 4.45863707662848 4.17251580066087 6.21170719590299 5.33663588579090 2.6150662217636 2.497288812115 2.29234398819044 3.00993951188693 5.26058004998063 4.91409579761551 5.19622235668415 4.66242682787816 4.07838562764951 5.42994708002508 5.97377739755098 4.73448971398362 3.37354020976927 0.245866577728734 0.247522678049768 0.246188346634612 0.244765658830629 0.248376803983996 0.262059872681156 0.248297999745446 0.252324073744454 0.249247230443641 0.25689966339877 0.253622501242366 0.244765658830629 0.253008512252006 0.256595890098260 0.248839437312111 0.253847418267223 0.278442093428028 0.267036754807448 0.244765658830629 2 2|0 -|/ 8614635 8615342 8614904.5 8614422 8619523 - gene protein_coding_gene FALSE TRUE AT2G19930.1 RNA-dependent RNA polymerase family protein similar to RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] (TAIR:AT2G19920.1); similar to RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] (TAIR:AT2G19910.1); similar to Os01g0198000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042304.1); similar to RNA-directed RNA polymerase [Petunia x hybrida] (GB:CAA09896.1); similar to Os01g0197900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042303.1); contains InterPro domain RNA dependent RNA polymerase; (InterPro:IPR007855) 2.34307148054157 18.4057382826276 1.51600638877076e-09 2.37679481631479e-05 12.9919399049201 7.7330431156252 2.34307148054157 0.161932444359041 AT2G15830_at 6.34582586287248 6.48363161349678 6.76860050599569 6.77182235962394 8.22217926854056 7.48295922288688 4.90657923216107 5.02954641395255 5.76368208182631 5.18918197279027 8.03940321143023 7.78934846118226 7.42600542687704 8.0556447010659 7.70784144949756 7.65911237023742 7.6456872992545 7.8637822174423 4.87040364596491 0.273201711413983 0.266493156265520 0.266493156265520 0.276877018224055 0.266493156265520 0.279289429394214 0.278332428973610 0.274882132519808 0.309878434380573 0.267915082185376 0.277377656427941 0.266493156265520 0.266493156265520 0.266493156265520 0.266493156265520 0.266493156265520 0.266493156265520 0.271854348741305 0.277867383512779 2 2 + 6901259 6901335 6901302.875 6901200 6901633 + gene protein_coding_gene FALSE TRUE AT2G15830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33960.1) 2.05946256695198 18.0921822337955 1.81772599730048e-09 2.84964904596796e-05 12.9349332245351 13.0252809144332 2.05946256695198 0.131859024534024 AT3G56370_at 3.37943482101067 3.42119997320550 2.05375149144540 1.96529762118527 2.07582479832403 2.35623582886750 5.54891422521098 5.73973794826997 4.9158618488325 4.70586592260352 4.87998963527635 5.22921368414138 4.16188606370958 4.35288865539678 5.08332513771442 3.59097894372865 2.73409323537575 4.10728227352436 5.49610565602754 0.241817995525436 0.242138755824483 0.252898723606009 0.251121410139833 0.241744274411129 0.250730870434386 0.243018532979324 0.246925857656500 0.253999048724575 0.241744274411129 0.241744274411129 0.241744274411129 0.243910937169432 0.250044448176994 0.247155279827681 0.243977025234885 0.24409720393317 0.241744274411129 0.243705999478529 3 3 - 20910403 20910948 20910724.818 20910078 20913960 - gene protein_coding_gene FALSE TRUE AT3G56370.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01890.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G28040.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT01367.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB85306.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26311.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.59068245625742 -17.8537231175773 2.09094134229245e-09 3.27775964817764e-05 12.8900295034964 7.97091709482138 -1.59068245625742 0.0610891430700272 AT1G52400_at 11.3428393503437 11.5038784987751 10.0121075814988 9.88336176720376 10.3473785711919 10.3389473337698 9.4243732163854 9.72453233223452 4.90245919616814 8.18299761386261 9.80991967486429 10.7864167515326 10.8267349033691 10.5153871665348 10.5283439657316 11.2954337261599 9.91180283956663 10.3195682906464 7.83431808716856 0.0960226535935102 0.0963020257239852 0.0950143046280818 0.0966019485804862 0.0945005734866114 0.101635518979663 0.0942623005942841 0.0943447766798944 0.144349043500642 0.112581981777922 0.0987255697875473 0.0958958369052049 0.0970013256222562 0.0970858794518212 0.097508137338719 0.0944286136004376 0.0961283153233261 0.0949763438981461 0.119972202530082 1 1|0 +|/ 19520684 19521563 19521270.3 19518820 19521880 + gene protein_coding_gene FALSE TRUE AT1G52400.1|AT1G52400.2 BGL1 (BETA-GLUCOSIDASE HOMOLOG 1); hydrolase, hydrolyzing O-glycosyl compounds encodes a member of glycosyl hydrolase family 1 Identical to Beta-glucosidase homolog precursor (EC 3.2.1.-) (BG1) [Arabidopsis Thaliana] (GB:Q9SE50); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT3G21370.1); similar to ATA27 (Arabidopsis thaliana anther 27), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G75940.1); similar to PYK10 (phosphate starvation-response 3.1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G09260.1); similar to beta-glucosidase [Brassica nigra] (GB:AAB38784.1); similar to beta-glucosidase [Brassica napus] (GB:CAA57913.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360)|Identical to Beta-glucosidase homolog precursor (EC 3.2.1.-) (BG1) [Arabidopsis Thaliana] (GB:Q9SE50); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT3G21370.1); similar to ATA27 (Arabidopsis thaliana anther 27), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G75940.1); similar to PYK10 (phosphate starvation-response 3.1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G09260.1); similar to beta-glucosidase [Brassica napus] (GB:CAA57913.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 1.58624278985779 17.7051708394793 2.28356589713296e-09 3.57948954375591e-05 12.8613532677283 19.0584069383589 1.58624278985779 0.063034593575683 AT1G55210_at 8.88110641646224 9.03189881593698 10.0614708081645 10.2429510581041 8.77131618375419 8.5733161836302 7.76056534877899 7.91516195729357 5.51363129647231 5.45554556688634 7.08625447562584 8.30062919072312 7.02570682598996 7.63232370735927 8.6132053199114 7.4243867469508 7.42881129577758 7.35852811855193 5.48603285644798 0.179433215223393 0.178404845678055 0.174700858453993 0.17630957763928 0.174700858453993 0.178056224941690 0.174700858453993 0.185659165050306 0.183014341491502 0.188084298942033 0.175065945948745 0.174700858453993 0.180757088460455 0.179553226452844 0.175210417460035 0.174700858453993 0.182446848171352 0.179221707775672 0.183257311901684 1 1 - 20601856 20602190 20602025.455 20601536 20602375 - gene protein_coding_gene FALSE TRUE AT1G55210.1 disease resistance response similar to disease resistance-responsive protein-related / dirigent protein-related [Arabidopsis thaliana] (TAIR:AT5G49040.1); similar to disease resistance-responsive family protein [Arachis hypogaea] (GB:AAZ20288.1); similar to Os12g0174700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066288.1); contains InterPro domain Plant disease resistance response protein; (InterPro:IPR004265) 1.56937061365217 17.6862277496217 2.30948702993728e-09 3.61988997072369e-05 12.857656904439 15.4516236548723 1.56937061365217 0.0596417628671519 AT1G58270_at 7.17238050997467 7.92985011529575 1.12731209954234 1.72920765702943 2.55196819626722 2.14876271965508 6.9360374526056 6.56894697264001 5.02549423877281 5.37022279945979 5.73096080757714 7.42610855100255 6.04323518099098 4.85987690518691 6.22413184457985 2.85236967764124 3.50983888951992 6.13436326660079 4.83425626235997 0.270336242295430 0.260268998886356 0.280572617371642 0.270083584460548 0.268477849474265 0.265734960088548 0.257253431908772 0.263584826472618 0.268886375697188 0.259297750928279 0.258508035053077 0.257253431908772 0.257253431908772 0.265218582268361 0.271150444004624 0.261865873161721 0.257253431908772 0.274758618314992 0.259410044324170 1 1 - 21616082 21616759 21616406.636 21615781 21617782 - gene protein_coding_gene FALSE TRUE AT1G58270.1 ZW9 ZW9 mRNA, complete cds similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G28220.1); similar to hypothetical protein DDBDRAFT_0218221 [Dictyostelium discoideum AX4] (GB:XP_641246.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) -2.49576911049113 -17.5843867204243 2.45444914794525e-09 3.84685814957459e-05 12.8376288157885 9.73269241900207 -2.49576911049113 0.192189537472483 AT3G02380_at 7.94654308278798 8.12262878402265 7.54319751554318 7.4136227917672 7.50296722670301 6.93366796836307 11.2690145178106 11.1551268668499 10.6472160723365 10.8594338291035 9.11267906087722 9.5664336977250 9.5897682716981 9.38380734965844 9.05972106303457 10.6374714585680 9.66845503112984 9.03073552255896 11.1455935439996 0.188200502804076 0.177398829993930 0.188986751641391 0.198203349050440 0.187873162722318 0.192720546309932 0.170207528134137 0.173132492091624 0.174106074769255 0.173101389424297 0.175686826981208 0.169603552603930 0.170952425170757 0.173115893101114 0.168243634011985 0.172386970416320 0.173268909467830 0.172716924860434 0.173108959252310 3 3|0 -|/ 487446 488103 487759.556 487243 488700 - gene protein_coding_gene FALSE TRUE AT3G02380.1 COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins Identical to Zinc finger protein CONSTANS-LIKE 2 (COL2) [Arabidopsis Thaliana] (GB:Q96502); similar to CO (CONSTANS), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15840.1); similar to Col-2-like protein [Brassica rapa] (GB:AAR90093.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) -1.82645582692363 -17.5725150733764 2.47198211193950e-09 3.87409036583159e-05 12.8352769070209 18.680953634424 -1.82645582692363 0.107359161579249 AT3G10450_at 5.12479884967714 6.05515803157224 7.76709951904256 7.43462131382605 8.38242819957655 7.8396654177058 3.95995873627461 4.23119088566079 3.16520559362467 4.27487854556201 5.63778793605616 5.81095107885463 5.454074006187 5.78451074962966 5.70906750664037 6.54113622763582 6.7352152429078 6.31632278271013 4.19707291114541 0.289315323986742 0.281426094538467 0.287702208834894 0.295197254859726 0.289043472368412 0.286572206654533 0.288545136242737 0.288422791744585 0.298698174837387 0.285892887555156 0.284312949502759 0.281426094538467 0.281426094538467 0.292663794344628 0.289559746534385 0.281426094538467 0.281426094538467 0.281426094538467 0.281426094538467 3 3 + 3251438 3252299 3251794.545 3249536 3252511 + gene protein_coding_gene FALSE TRUE AT3G10450.1|AT3G10450.2 SCPL7; serine carboxypeptidase similar to SCPL1 (serine carboxypeptidase-like 1), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G36180.1); similar to SCPL2 (serine carboxypeptidase-like 2), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G73300.1); similar to SCPL5 (serine carboxypeptidase-like 5), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G73290.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE93325.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 2.56637891397927 17.5576416365355 2.49414107910457e-09 3.90856848506477e-05 12.8323251980457 11.2882078898862 2.56637891397927 0.200644049108897 AT4G33790_at 3.98670113516405 4.54356761262004 7.30020786512763 7.40033019007499 8.43816016826134 8.44202167411501 7.84437588511962 8.06872742021168 9.61382067756784 7.86500959635783 11.2175043196655 10.5421801467724 10.3411767509925 10.8502734908552 10.7055814351865 10.2673699431730 8.79931245591324 10.4305212817985 8.35910910119223 0.225045998692746 0.240605322750807 0.211119315933136 0.217707693274970 0.199615597345682 0.194259149117117 0.204297044576433 0.208735224852178 0.19865384460658 0.211179670266233 0.206985878881860 0.202900711295714 0.195715543085453 0.201763111000199 0.204884172019072 0.202079194473523 0.217718981430645 0.206527260125982 0.197749908874315 4 4|0 -|/ 16204341 16205172 16204824.6 16204159 16207950 - gene protein_coding_gene FALSE TRUE AT4G33790.1 acyl CoA reductase, putative similar to acyl CoA reductase, putative / male-sterility protein, putative [Arabidopsis thaliana] (TAIR:AT5G22500.1); similar to acyl CoA reductase [Hevea brasiliensis] (GB:AAR88762.1); contains InterPro domain Male sterility; (InterPro:IPR004262); contains InterPro domain Male sterility C-terminal; (InterPro:IPR013120) 1.78296524039392 17.2813057106034 2.94776642882371e-09 4.61914999396676e-05 12.7764338462454 16.5064547120454 1.78296524039392 0.105332344522690 AT1G67980_at 7.47163854972583 7.67187090092649 8.74867894373566 9.31915273830623 9.72907539845025 9.03242291192755 1.76667322024133 1.94551197028868 2.26919529197437 2.06564868037288 1.98279669343428 2.09089789824313 1.90791718646204 1.87955311922314 2.30589062100144 2.18547039254929 2.21364340299531 1.97201022702195 2.14609432066276 0.358380034732623 0.345618626128555 0.347857014367448 0.342191005375234 0.346831887376322 0.358160578327758 0.327315952959038 0.323118967701319 0.329757157371587 0.331675100194351 0.324431141726004 0.326950891943548 0.325906313779479 0.325892121029814 0.321754343393443 0.325361332408468 0.335293518945315 0.321754343393443 0.321754343393443 1 1 + 25491849 25492569 25492270 25491377 25492894 + gene protein_coding_gene FALSE TRUE AT1G67980.1|AT1G67980.2 CCoAMT (caffeoyl-CoA 3-O-methyltransferase); caffeoyl-CoA O-methyltransferase|CCoAMT (caffeoyl-CoA 3-O-methyltransferase) Encodes S-adenosyl-L-methionine: transcaffeoyl Coenzyme A 3-O-methyltransferase. Identical to Putative caffeoyl-CoA O-methyltransferase At1g67980 (EC 2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase) (CCoAMT) (CCoAOMT) [Arabidopsis Thaliana] (GB:Q9C9W3;GB:Q39166); similar to caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G67990.1); similar to S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase (GB:AAA62426.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 3; (InterPro:IPR002935)|similar to caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G24735.1); similar to S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase (GB:AAA62426.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 3; (InterPro:IPR002935) 2.20018425804450 17.2408942134754 3.02132151053978e-09 4.73410867486477e-05 12.7680900578613 9.07442068267675 2.20018425804450 0.162601533167406 AT2G36220_at 8.30057040192739 8.59095021596044 8.98316921375183 9.32955968823702 9.7385991873780 9.69548944190146 7.43584617769354 7.72613347139037 5.51038261743636 5.57451145860254 7.60643478703829 7.3559903086694 7.79375265962433 8.03576490928463 7.40274912683227 7.57141908006622 7.86042095219808 7.19735913304494 5.78219960418925 0.198033137345395 0.200230998886879 0.202056806287111 0.209401691669513 0.209393413201136 0.207516022435869 0.195325788125409 0.200548983563530 0.249658904414976 0.226922293820973 0.202437172395735 0.197570412254802 0.196017225778106 0.195325788125409 0.204781982163721 0.196647138793644 0.196047262578687 0.207800213928552 0.231043067507388 2 2 + 15199829 15200372 15200043 15199559 15200777 + gene protein_coding_gene FALSE TRUE AT2G36220.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52710.1); similar to Os11g0153300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065777.1); similar to calcium/calmodulin protein kinase 1 [Nicotiana tabacum] (GB:AAN71903.1) 1.70197556279643 17.2246592490257 3.05143228582571e-09 4.78098410543172e-05 12.7647255636495 15.3377151896154 1.70197556279643 0.0932621688728528 AT2G18170_at 8.15358297660074 8.09530338589728 8.3029215865676 8.20387533424848 8.59300879830471 8.8119433494329 6.60116181396213 6.12707310457494 4.32719164065092 5.15828351838067 6.5539003633129 6.50083218176796 7.17025660880869 6.73719804848573 6.79892677072587 6.49610762313788 7.92805329056073 6.21493538348411 4.45665872665857 0.209413197382305 0.205375587205661 0.211107755477550 0.208143941328666 0.205340644302792 0.218175746275205 0.215475968927975 0.238834229134219 0.224615761161297 0.211205115195650 0.216969187272320 0.208526999581966 0.211911536718633 0.215320262987776 0.209966628478462 0.205340644302792 0.207610599638082 0.209139602553648 0.229813396370522 2 2 - 7915270 7915761 7915463.091 7914886 7917005 - gene protein_coding_gene FALSE TRUE AT2G18170.1 ATMPK7 (MAP KINASE 7); MAP kinase/ kinase Identical to Mitogen-activated protein kinase 7 (EC 2.7.11.24) (MAP kinase 7) (AtMPK7) (MPK7) [Arabidopsis Thaliana] (GB:Q39027;GB:Q56W33;GB:Q9SI14); similar to ATMPK14 (Arabidopsis thaliana MAP kinase 15), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G36450.1); similar to ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G10210.2); similar to double HA-tagged mitogen activated protein kinase 14 [synthetic construct] (GB:ABG54341.1); similar to double HA-tagged mitogen activated protein kinase 7 [synthetic construct] (GB:ABG54334.1); similar to putative mitogen-activated protein kinase MAPK [Prunus armeniaca] (GB:AAD32204.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain MAP kinase; (InterPro:IPR003527) 1.69315263438421 17.1793270426093 3.13725296672297e-09 4.91513422296487e-05 12.7552930342434 13.5848109165397 1.69315263438421 0.0925315233113598 AT3G26320_at 6.54671179754513 7.33121079491056 3.58807121662682 3.69105977523791 3.93758007647459 3.80747294136297 3.90549331597528 3.90528443530409 5.72169368568482 4.6580871586109 2.73927370871738 2.47333550418849 3.00097477431366 3.30815356352975 3.2492730034652 3.18657408647925 2.87343395435115 2.65413117226816 5.26819316912596 0.279944464355539 0.282262064216513 0.266925701356142 0.263978953727120 0.262262578343983 0.262262578343983 0.262262578343983 0.272558431830376 0.280650266188212 0.280089507510792 0.265700856802401 0.265796373924834 0.269176489758401 0.262262578343983 0.266440368351529 0.262262578343983 0.272023042008512 0.262262578343983 0.283851980895457 3 3 - 9645622 9646091 9645833.636 9645620 9647301 - gene protein_coding_gene FALSE TRUE AT3G26320.1 CYP71B36 (cytochrome P450, family 71, subfamily B, polypeptide 36); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B36 (EC 1.14.-.-) (CYP71B36) [Arabidopsis Thaliana] (GB:Q9LIP4); similar to CYP71B34 (cytochrome P450, family 71, subfamily B, polypeptide 34), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26300.1); similar to CYP71B9 (cytochrome P450, family 71, subfamily B, polypeptide 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G02580.1); similar to CYP71B37 (cytochrome P450, family 71, subfamily B, polypeptide 37), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26330.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAL24049.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -1.97323835020064 -16.8926617617844 3.74470510992201e-09 5.86645502520383e-05 12.6943245284873 8.66492807354035 -1.97323835020064 0.138764940529763 AT3G13065_at 6.2334248598471 5.75336384783954 4.14653538795061 3.92279052741855 4.53869056979346 4.49172260901356 5.80247905049314 5.1591400717136 5.82422495251733 6.56804239416283 3.88002022950038 3.3487675383901 3.85935858404962 3.24697322350272 3.23874301483706 3.5103784966155 4.08045065104476 3.32121178717676 5.97843418095147 0.32042407411891 0.316610195342497 0.315476950706239 0.321530669258506 0.318131597063706 0.318465092270596 0.325926845689662 0.314782392108746 0.332345180939720 0.327894296976114 0.314782392108746 0.322992356033149 0.319099959678421 0.314782392108746 0.319949991240688 0.315700553163963 0.314782392108746 0.316255650866029 0.320101777292882 3 3|0 +|/ 4189819 4190584 4190207.444 4187768 4190870 + gene protein_coding_gene FALSE TRUE AT3G13065.1 leucine-rich repeat transmembrane protein kinase, putative similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G78980.1); similar to Protein kinase [Medicago truncatula] (GB:ABE91085.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -2.01249820958345 -16.867631062088 3.80353273424762e-09 5.9582340281989e-05 12.6888905825279 9.8481709237671 -2.01249820958345 0.144437042418171 AT1G27730_at 7.92779442691327 8.26035222332256 9.15632920994932 9.3196963347755 8.11503263806727 7.85045772431525 3.44969067689893 3.43565950462022 4.93401183833688 3.30020816204101 3.87116805355381 4.38468482102964 3.38897705158025 4.31656752373476 3.54159466639689 4.08060383765589 3.75462716052353 4.12918648401327 2.59042580343097 0.242412440706793 0.226431177737222 0.224868110150787 0.226760535793759 0.231172477256008 0.235614634356924 0.231343999808872 0.227054828969311 0.237335499745318 0.221094909069484 0.220037707331402 0.220037707331402 0.222355078168404 0.231856582474066 0.229977070810658 0.220037707331402 0.232270372709153 0.222003316440207 0.235336048506387 1 1 - 9648309 9648835 9648552.364 9648128 9649060 - gene protein_coding_gene FALSE TRUE AT1G27730.1 STZ (SALT TOLERANCE ZINC FINGER); nucleic acid binding / transcription factor/ zinc ion binding Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. similar to C2H2, nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G04340.1); similar to zinc finger protein PIF1 [Nicotiana benthamiana] (GB:AAQ54303.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.5836078503564 16.8333039997414 3.88585088219479e-09 6.08679682186991e-05 12.6814091054093 10.9601973262314 1.5836078503564 0.078826402064971 AT1G68620_at 7.25181210276057 7.01970356510725 9.8305310083372 9.6845322065752 5.56798325960879 5.87572797642443 2.22593073638370 2.21986560907875 1.64204740260167 1.64658950782947 1.09136632653743 1.21949106879546 2.16148362173797 1.79804466401854 1.52517615387731 2.24923386609389 2.16533357525813 1.80239349277800 1.89781118236808 0.361588120412033 0.383940018867929 0.375575630961198 0.374370266277807 0.376831649162838 0.3631604384586 0.340423611623954 0.341574670298108 0.342047416700258 0.348480658251566 0.346009172308409 0.347752141314842 0.347505519106008 0.356126982641437 0.340423611623954 0.348510931341217 0.346157593394604 0.342677958752927 0.345709643913698 1 1 + 25770113 25770642 25770406.909 25769610 25770903 + gene protein_coding_gene FALSE TRUE AT1G68620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16080.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89015.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.54155746230393 16.7829336205640 4.0101735710523e-09 6.28113486433922e-05 12.6703691676841 7.94970149656957 1.54155746230393 0.0713383339206356 AT4G30290_at 2.67274311292083 3.10921336155983 2.81947519860197 2.79385634700838 7.03964510206348 6.61333131209376 5.03240342605562 5.44998688096134 2.89643626138446 3.19676529763388 7.60351626360293 6.62098817468141 5.4321188095769 7.57769336136928 5.74095515291394 5.22382989574987 4.13093537037496 7.38172415719723 3.52695198782686 0.336618038721331 0.315189533356329 0.330456842013155 0.321928053229072 0.322229471574689 0.324398177116237 0.315189533356329 0.323022344391545 0.349107733198016 0.320703533116243 0.318355994210234 0.315189533356329 0.315189533356329 0.319294494080006 0.315189533356329 0.315189533356329 0.320094107180573 0.317221895715281 0.317063023009306 4 4|0 -|/ 14829002 14829711 14829239.667 14828718 14830022 - gene protein_coding_gene FALSE TRUE AT4G30290.1 ATXTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds putative xyloglucan endotransglycosylase/hydrolase, expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) (XTH19) [Arabidopsis Thaliana] (GB:Q9M0D1;GB:Q94A49); similar to ATXTH18/XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G30280.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 1.87887129690120 16.7441708423845 4.10879493446035e-09 6.4351946263518e-05 12.6618228829306 9.151675841224 1.87887129690120 0.128023261614985 AT4G36410_at 6.83970822287315 7.05951519856064 3.59929946329606 3.82993079446539 3.58450669394029 3.69883143494286 4.39253379677176 4.32351064447711 3.52978864253372 2.87381549331156 1.83008521755972 2.45555931786275 2.22588129892962 1.69012984581159 2.19044097332614 4.43731924726522 2.81327517105287 1.65201161006040 3.81280060369307 0.237414471953275 0.232940243627714 0.231977132276159 0.235724055387219 0.238529585980192 0.244014107241516 0.239343883436242 0.236187697068428 0.239329492370560 0.235869831937178 0.251276194349202 0.236970628612057 0.241162118635909 0.232640325533634 0.238039212831028 0.232841904680698 0.236073695295635 0.247317724410589 0.232949546214214 4 0|4 /|+ 17202114 17202860 17202471 17201925 17202991 + gene protein_coding_gene FALSE TRUE AT4G36410.1 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17); ubiquitin-protein ligase ubiquitin-conjugating enzyme similar to UBC16 (ubiquitin-conjugating enzyme 15), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G75440.1); similar to Ubiquitin-conjugating enzyme, E2 [Medicago truncatula] (GB:ABE89644.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) -1.48465264014438 -16.7249091698395 4.15878042097742e-09 6.51306601729274e-05 12.6575597198961 7.57463257203907 -1.48465264014438 0.0597828750108433 AT2G37950_at 4.66788988658004 4.83089428795888 2.31018298051923 2.43075197028865 2.76982738705414 2.22747418427284 3.97764834362073 4.28070500027279 4.32675886879901 5.0227564769544 3.10749311965112 3.72319205838863 3.29221717821957 3.68079152208964 3.19522413296656 3.41704298861057 3.04745044202907 2.92398591851119 5.16481028126451 0.258449811844153 0.275465891462017 0.253793102976517 0.252496317791633 0.254353882275651 0.259365141756 0.260578648905638 0.267086744541312 0.264306531218510 0.263261428275483 0.255237734969828 0.255561885639854 0.255674316846923 0.255745355610969 0.25741210850887 0.252496317791633 0.271923635869071 0.268597229345628 0.261757107326295 2 2 - 15889624 15890686 15890312.273 15889566 15891057 - gene protein_coding_gene FALSE TRUE AT2G37950.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G05830.1); similar to zinc finger protein [Brassica rapa] (GB:ABK56014.1); similar to Os05g0452800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055711.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -1.77220456067770 -16.695105455714 4.23743272824412e-09 6.6358196524303e-05 12.6509417177972 7.50518836126971 -1.77220456067770 0.113095909859157 AT2G44080_at 7.07901968584322 7.66871012624583 7.01426139321004 7.03112418723302 7.7948555565047 7.04907795874664 2.9661148857568 3.19733145118262 5.61636770190773 4.80465181797659 7.51866660671552 7.92015785080076 8.07016918151314 7.54357836918665 6.87873438034516 8.54751253064686 7.72074528121278 7.24962048514446 5.5236395019844 0.266383509556806 0.259701007441459 0.267573027416795 0.260341209671119 0.259701007441459 0.278143777818713 0.278061812496205 0.289890597793237 0.278867468768175 0.286811358483167 0.261402549591619 0.259701007441459 0.263065376177976 0.269668913803507 0.261927701454058 0.262479928666914 0.26498006100652 0.268852672158719 0.268794244125297 2 2 + 18244906 18245165 18245049 18244228 18245249 + gene protein_coding_gene FALSE TRUE AT2G44080.1 ARL (ARGOS-LIKE) Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1. similar to (ARGOS), unknown protein [Arabidopsis thaliana] (TAIR:AT3G59900.1); similar to Os11g0247000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067611.1); similar to Os04g0444300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052892.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84385.1) 2.18039874086962 16.6694709620439 4.3063786259207e-09 6.74335829032923e-05 12.645228443625 12.7230791187496 2.18039874086962 0.169351871805377 AT1G04680_at 7.82611221765274 7.86689099044749 4.46234715305103 4.53390341620297 5.46761763752463 5.67704811869893 8.17240956832823 8.45171735078367 9.57686977048674 8.7020417526883 9.92259242645497 10.2172399995576 8.33638858218119 9.3781969757135 9.9418054561083 8.02732527755543 7.1063823469581 9.0160001624176 8.49289205076645 0.213999379611607 0.212923622452976 0.245944772361610 0.237129017762023 0.219936904361839 0.239560441291037 0.209590837706599 0.209590837706599 0.218455102859075 0.209590837706599 0.209590837706599 0.214982371381637 0.214665573747164 0.214456701344083 0.212101266126262 0.21111601025505 0.217781005815425 0.209590837706599 0.214265269696240 1 1|0 -|/ 1304066 1304900 1304487.1 1303528 1307881 - gene protein_coding_gene FALSE TRUE AT1G04680.1 pectate lyase family protein Identical to Probable pectate lyase 1 precursor (EC 4.2.2.2) (Pectate lyase A1) [Arabidopsis Thaliana] (GB:Q940Q1;GB:O23017;GB:O23666); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT5G48900.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G07010.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G13710.1); similar to pectate lyase [Fragaria x ananassa] (GB:AAK66161.1); similar to ripening-related pectate lyase [Man (GB:AAX88800.1); similar to pectate lyase 2 [Musa acuminata] (GB:AAF19196.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -1.48737328585623 -16.6475595498776 4.36627954848345e-09 6.83672051701539e-05 12.6403294451667 15.5158437705940 -1.48737328585623 0.0620726528548798 AT4G12970_at 5.58902378407789 5.53666270995512 2.28187050669860 2.74454432115665 3.65168757685038 3.29912318406084 4.95817690895611 4.77163771168485 5.52192380253917 5.75609343405662 4.40900407299755 6.8686550737024 4.58000211529747 4.4263197500858 6.7291595430779 5.00975463392202 2.96412476447800 4.01603681129024 7.02156123458127 0.258626973085521 0.242340401955916 0.261202830084026 0.265281029064954 0.245236740930487 0.242019049337412 0.241388112469918 0.247103244118735 0.242432100373627 0.243315546407916 0.238874591474876 0.246618094350174 0.24059225797471 0.242042146401016 0.243166132574549 0.246320574373472 0.271495343299762 0.238874591474876 0.247927548276188 4 4|0 -|/ 7586264 7586741 7586411.111 7586140 7586846 - gene protein_coding_gene FALSE TRUE AT4G12970.1 similar to Os01g0914400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045180.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC75419.1) -1.72202313813140 -16.6439231301520 4.37630817775637e-09 6.85198571391315e-05 12.6395150205129 9.59171163092945 -1.72202313813140 0.106102023600769 AT2G17840_at 10.2694571160370 10.4703998081681 10.0005150444115 10.2252559761971 10.4341534177765 10.2610730605379 8.3439087587902 8.34992413032168 7.20951513554745 6.90602420698552 8.52069227729543 8.76321266746247 9.2751904732375 9.04975829402269 8.54126338794603 10.4493558475836 9.33912813636865 8.99816322135306 6.99618942107351 0.160199807178136 0.161332251706175 0.159587335877653 0.162285851764269 0.160038011997716 0.160364732849245 0.169184192377645 0.167454920714540 0.180677991122619 0.170597548033446 0.160697758287301 0.157964568811426 0.155801293074630 0.157661114117121 0.174981031177484 0.157661654240061 0.165574696454452 0.16009674795303 0.171566366227543 2 2 - 7763017 7764095 7763355 7762687 7764934 - gene protein_coding_gene FALSE TRUE AT2G17840.1 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis. similar to senescence/dehydration-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G35985.1); similar to Senescence-associated [Medicago truncatula] (GB:ABE77914.1); contains InterPro domain Senescence-associated; (InterPro:IPR009686) 1.47583976917900 16.6077832020459 4.47735022628892e-09 7.00973951427793e-05 12.6313994757292 17.8715051437104 1.47583976917900 0.0601671637723003 AT1G66940_at 7.25764043667215 7.56198510853376 2.02930106889509 1.89893748782764 3.67485952273414 3.00406527580250 4.03718258731735 3.14226812848841 8.6980870600302 5.95635527269681 6.04219611015729 7.63132346561528 4.73556825989944 5.99530375301023 7.06062700753274 5.75156167348567 1.8041503740766 4.78733913220131 7.85341163192038 0.288113351227659 0.280692377887076 0.282210079308753 0.285763592919509 0.272838410632852 0.275955692854943 0.285816337268081 0.285843696367696 0.286919478157051 0.277384842440219 0.274480186793369 0.274191129011476 0.275962264030201 0.282076769690356 0.272838410632852 0.275031438405655 0.287140932792129 0.276085844306872 0.272838410632852 1 1|0 -|/ 24976906 24977914 24977459.222 24976691 24978454 - gene protein_coding_gene FALSE TRUE AT1G66940.1|AT1G66940.2|AT1G66940.3 protein kinase-related similar to kinase [Arabidopsis thaliana] (TAIR:AT1G67000.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78903.1) -2.43729374632827 -16.6054018300329 4.48409681748133e-09 7.01985356776702e-05 12.6308633404302 10.5650933071404 -2.43729374632827 0.201848600301138 AT1G22770_at 9.6901620266563 9.93745423371561 9.78333567727566 9.84355150209686 10.2925245841927 10.0229476720191 7.77268805603437 7.88306352464599 6.4563443154132 6.70504013937186 8.29729118388765 8.22697820727427 8.51218858927142 8.64160169584843 8.13978200545143 7.61375448282818 8.57168940184669 8.49038552284274 6.23880181743993 0.197303590738372 0.202554678712370 0.198013340227402 0.197475300066537 0.202819799335394 0.206331079835943 0.197073235847202 0.195994944624869 0.215122920221543 0.221671582414387 0.203013162530954 0.203689726030858 0.196390007148527 0.195994944624869 0.198784435487938 0.199142420964671 0.207938258573447 0.195994944624869 0.213850901059851 1 1|0 +|/ 8066712 8067406 8067121.3 8061833 8067705 + gene protein_coding_gene FALSE TRUE AT1G22770.1 GI (GIGANTEA) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Identical to Protein GIGANTEA (GI) [Arabidopsis Thaliana] (GB:Q9SQI2;GB:O64381;GB:O80545;GB:Q9S7N0); similar to (GB:ABE81212.1); similar to (GB:AAT79487.1); similar to (GB:AAW66945.1) 1.50486401369051 16.6048483862384 4.48566634624115e-09 7.02186209840589e-05 12.6307387152421 16.7924347313619 1.50486401369051 0.0669419276491146 AT4G34590_at 3.48470005664375 4.00521483629129 4.96812215572685 5.65932509745586 5.44048433061993 6.01855078926483 3.05541457561681 3.29195033765877 3.29116602732630 3.18212786561081 6.29421735292469 5.74918154339222 5.55734419425745 5.20276876510252 6.01834758724443 6.26064852039805 5.57561042261732 5.59135582327437 3.3770357951594 0.248790544543553 0.242417009816372 0.243833769460900 0.241222814047338 0.246238318504838 0.247126358313869 0.241222814047338 0.251524252165319 0.253794481779782 0.256410618889336 0.24247593621846 0.243881242543671 0.244490794156114 0.249325396602975 0.242390041476822 0.241222814047338 0.248501569003213 0.248579160695392 0.251574398993081 4 4 + 16522457 16522904 16522707.273 16521866 16523235 + gene protein_coding_gene FALSE TRUE AT4G34590.1 GBF6 (G-box binding factor 6); DNA binding / transcription factor Encodes a basic domain leucine zipper (bZip) transcription factor. similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT1G75390.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE85416.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 2.28002084425005 16.4961996658289 4.80568697564453e-09 7.52234182297639e-05 12.6060934894649 9.0227840251682 2.28002084425005 0.184675123724816 AT1G17745_at 8.70805785059702 8.59281820856757 10.7212604993273 10.6522016346672 7.57166284835586 7.79741232565946 5.59779623845024 6.34383260092708 3.58401651712485 4.74197970224686 4.99799500383150 7.04040248974466 6.168257509518 6.8980217666899 6.72154138942455 6.39969644409812 6.11129433806432 6.0066321651718 4.70816107262825 0.233246024420128 0.233012358170838 0.239747615219935 0.238914579815567 0.226069985286423 0.226069985286423 0.231212952080192 0.226069985286423 0.231460521205346 0.234700396119627 0.229051572910564 0.226069985286423 0.226069985286423 0.226660442004531 0.226336498246980 0.23063627960868 0.240939980345725 0.227402451621078 0.234726538051976 1 1 + 6104385 6104924 6104585 6100957 6105258 + gene protein_coding_gene FALSE TRUE AT1G17745.1 PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase Identical to D-3-phosphoglycerate dehydrogenase, chloroplast precursor (EC 1.1.1.95) (3-PGDH) [Arabidopsis Thaliana] (GB:O04130); similar to D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative [Arabidopsis thaliana] (TAIR:AT3G19480.1); similar to EDA9 (embryo sac development arrest 9), NAD binding / amino acid binding / cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G34200.1); similar to D-isomer specific 2-hydroxyacid dehydrogenase, catalytic re (GB:ABE86334.1); similar to H0212B02.14 [Oryza sativa (indica cultivar-group)] (GB:CAH68268.1); similar to putative D-3 [Oryza sativa (japonica cultivar-group)] (GB:BAD37553.1); contains InterPro domain D-3-phosphoglycerate dehydrogenase; (InterPro:IPR006236); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; (InterPro:IPR006139); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140) 1.91163457167576 16.4813180691891 4.85142185408003e-09 7.59344548600607e-05 12.6026898238840 13.5669798936446 1.91163457167576 0.136875450903205 AT4G16260_at 2.55305987097280 2.44423321855319 6.53481931284393 6.70081715623323 3.16201390168688 2.64968726992055 0.547510519430027 0.512738272527989 0.866739706751342 0.229552438838335 0.590656557011947 0.547107941365325 0.809192365874265 0.821019994844901 0.563552604900511 0.478442767003225 1.14968402370972 0.462453569253248 0.859042965776852 0.301494038091855 0.320560994080484 0.361986806367746 0.361831815267462 0.319836868519866 0.328292792324787 0.302905551220577 0.301494038091855 0.303073787028731 0.306690551613459 0.301498488549637 0.301494038091855 0.302065127809919 0.30174933204063 0.307100228521979 0.303189228129029 0.307751616512824 0.307538221939641 0.303268711765579 4 4|0 -|/ 9200396 9200885 9200596.7 9200025 9201568 - gene protein_coding_gene FALSE TRUE AT4G16260.1 glycosyl hydrolase family 17 protein similar to BG1 (BETA-1,3-GLUCANASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57270.1); similar to beta-1,3-glucanase [Hevea brasiliensis] (GB:ABG49448.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 1.63671714867001 16.44729356993 4.95777769419474e-09 7.7594178691842e-05 12.5948822841449 3.80288098949653 1.63671714867001 0.095272244602471 AT1G30530_at 6.15986361820738 6.36486641582059 4.58824704576981 4.64819666729322 4.29032898575541 4.23893163808573 7.25895544937577 7.13104227664687 6.75856332357085 7.46677909010817 6.00927754517482 7.68549572031369 6.2279130029999 6.27285482169555 6.81577925471462 6.99744750160631 5.61978871694884 5.87909620743926 6.63200089492579 0.251868739445915 0.243699854386083 0.267965497948535 0.266877924598490 0.251734432748904 0.247739882461477 0.259509750504072 0.260693748985807 0.252527502461483 0.243699854386083 0.251510512009328 0.249480210885953 0.250261826206162 0.248889304466776 0.247399269213484 0.243699854386083 0.250886800112914 0.243842115252911 0.243699854386083 1 1 + 10815788 10816237 10816009.5 10814641 10816565 + gene protein_coding_gene FALSE TRUE AT1G30530.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin Identical to Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115) (Flavonol-3-O- rhamnosyltransferase) (UDP glucose:flavonoid 3-O-glucosyltransferase) (UGT78D1) [Arabidopsis Thaliana] (GB:Q9S9P6;GB:Q8LAI9); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17050.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:BAB41020.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.40062351447996 -16.4183306120723 5.05031293129464e-09 7.9037397374761e-05 12.5882080443245 12.2805061950676 -1.40062351447996 0.0439925144388230 AT4G36360_at 6.52604285607248 7.01374575166459 2.86225719066045 2.78097691314992 2.84188388420248 3.65819439313253 8.57775624171438 8.74442659892409 6.99318276491164 8.2944418949946 8.47049479126979 9.47177632037072 7.64337935403112 8.17959490116177 8.95908114881193 8.27445572208312 6.87729770226364 8.11716242523992 8.19621478531124 0.216763540529865 0.197405972003787 0.224970544322902 0.218736370918228 0.215413022498933 0.22055502053896 0.198913348432707 0.197407799106165 0.208797179708950 0.20221110250332 0.200841892885635 0.204769369031638 0.201318601089754 0.200762916055718 0.197405972003787 0.197405972003787 0.206422303790415 0.201747527303596 0.197405972003787 4 4 - 17176865 17177483 17177175.727 17176345 17181264 - gene protein_coding_gene FALSE TRUE AT4G36360.1|AT4G36360.2 BGAL3 (beta-galactosidase 3); beta-galactosidase putative beta-galactosidase (BGAL3 gene) similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT1G45130.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to beta-galactosidase [Prunus persica] (GB:AAW47739.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91082.1); similar to putative beta-galactosidase [Lycopersicon esculentum] (GB:AAF70825.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain D-galactoside/L-rhamnose binding SUEL lectin; (InterPro:IPR000922) -2.12922797644635 -16.3790232875471 5.17891785642176e-09 8.10448855351441e-05 12.5791083811813 13.4142113673867 -2.12922797644635 0.167657949530812 AT1G14840_at 5.26936010444317 5.1776181494805 3.25547473804704 3.28862266907692 4.52441004990395 4.20138079527006 6.92583307164226 6.76873212158342 6.20952807428223 6.07032052815366 5.65710778128124 6.75471486689514 5.56079971791366 5.39046370749772 6.32011110841786 5.73425005743295 4.61119077172681 4.8216498432808 6.72269405796693 0.255575255464297 0.244715737903008 0.247815092289460 0.260792441794294 0.240328037225315 0.251441245315531 0.245424968216683 0.257666717851791 0.249767689488061 0.247040231692650 0.24454274274984 0.244343869794282 0.241842756143197 0.261626659899587 0.242710805099541 0.246851592183204 0.243012929929388 0.245472732013845 0.241972772731062 1 1|0 -|/ 5112424 5113129 5112852 5112079 5115423 - gene protein_coding_gene FALSE TRUE AT1G14840.1 ATMAP70-4 (microtubule-associated proteins 70-4); microtubule binding Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues. similar to ATMAP70-2 (microtubule-associated proteins 70-2), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G24764.1); similar to ATMAP70-1 (MICROTUBULE-ASSOCIATED PROTEINS 70-1), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G68060.1); similar to ATMAP70-3 (microtubule-associated proteins 70-3), microtubule binding [Arabidopsis thaliana] (TAIR:AT2G01750.1); similar to Myosin II heavy chain-like [Medicago truncatula] (GB:ABE90729.1); similar to Os06g0251700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057297.1); similar to Os02g0736100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048050.1); contains InterPro domain Myosin II heavy chain-like; (InterPro:IPR009768) -1.47290435185401 -16.3743566732579 5.19442118427885e-09 8.12823026915955e-05 12.5780248591374 10.8966623967343 -1.47290435185401 0.0644135354755062 AT2G39920_at 10.3759509698576 10.4588584421406 10.6415426664749 10.4120097288754 10.9123389210689 10.7200187013311 8.89395625460639 8.6202496275152 7.93257392632804 8.25472193757582 9.15810296368882 9.26491631529374 8.96035837852879 9.6115697388951 9.2503415988248 8.75352349965026 9.69359046047426 9.3479204530491 5.81910969035754 0.146127593976392 0.141262627022123 0.152474232171409 0.149067219834315 0.146803479302447 0.146233515499171 0.149169816759729 0.149532170029111 0.174530959642115 0.152630979506695 0.145922443620692 0.141866276333558 0.147749858964583 0.143610235336869 0.141262627022123 0.146799905574560 0.150176682952253 0.148375522336741 0.186607119464544 2 2 - 16670310 16670987 16670608.455 16670097 16671616 - gene protein_coding_gene FALSE TRUE AT2G39920.1 acid phosphatase class B family protein Identical to Hypothetical protein At2g39920 [Arabidopsis Thaliana] (GB:O04195); similar to acid phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G25150.1); similar to HAD superfamily (subfamily IIIB) phosphatase, putative [Medicago truncatula] (GB:ABE88130.1); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519) 1.50189779443556 16.3348846462182 5.32759340937513e-09 8.33608540764926e-05 12.5688327276376 18.4246201360526 1.50189779443556 0.0716582989590389 AT4G30270_at 10.3891906490011 10.8354869320969 12.7989263124889 12.9032706779371 12.2584633829780 12.4382803043756 9.12626136552353 9.43509105574163 10.3820355687985 10.2055306947110 11.7338921400244 9.07288636278855 11.6480039722531 11.6453053474185 9.4759689522055 10.7136637896637 11.5124775202559 11.8875006033994 10.3385915935952 0.101997062174180 0.0995679516269 0.103480189929569 0.102536955926840 0.0995679516269 0.102245224540576 0.106488654194690 0.103792768006133 0.106696465747087 0.0998011274409507 0.101170148854613 0.107366702444624 0.101254956868314 0.0999778767075836 0.103405482735785 0.0995679516269 0.103823063025663 0.0995679516269 0.100462959707333 4 4|0 -|/ 14819470 14820212 14819771.5 14819198 14820598 - gene protein_coding_gene FALSE TRUE AT4G30270.1 MERI5B (MERISTEM-5); hydrolase, acting on glycosyl bonds encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response. Identical to Xyloglucan endotransglucosylase/hydrolase protein 24 precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) (XTH24) [Arabidopsis Thaliana] (GB:P24806;GB:O64956;GB:Q39148;GB:Q39149;GB:Q41904;GB:Q8LDQ0); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 1.65286035957682 16.2981989505526 5.45470224134932e-09 8.53442712681515e-05 12.5602455204261 21.9080871458692 1.65286035957682 0.100577075147945 AT3G50210_at 6.57457077416821 7.02684938907142 7.3599106130858 7.53004988389689 8.27856124076142 7.71718876475442 3.72541563408828 3.76973007934886 4.08838325335421 3.84313172374972 5.04857094242263 4.70359466085441 5.40831479191498 5.34563805046887 5.27660138383883 5.33229927991636 5.97960344087281 5.54601235851236 4.43223811712072 0.254683816427423 0.24456783657243 0.250222022230124 0.24621525402461 0.246029750406458 0.247377569939610 0.250561815128582 0.254010732554425 0.256949543258871 0.2554134725938 0.244572998396436 0.24518958370249 0.257270025076543 0.247978800268293 0.24646263774514 0.244195562216394 0.257533372346735 0.245737757433322 0.244422163690426 3 3|0 -|/ 18625320 18626219 18625823.667 18625154 18627418 - gene protein_coding_gene FALSE TRUE AT3G50210.1|AT3G50210.2|AT3G50210.3 2-oxoacid-dependent oxidase, putative|oxidoreductase similar to DIN11 (DARK INDUCIBLE 11), oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G49620.1); similar to putative flavonol synthase-like protein [Euphorbia esula] (GB:AAF34802.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123)|similar to DIN11 (DARK INDUCIBLE 11), oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G49620.1); similar to 2-oxoacid-dependent oxidase, putative [Arabidopsis thaliana] (TAIR:AT3G49630.1); similar to putative flavonol synthase-like protein [Euphorbia esula] (GB:AAF34802.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.82805724432369 16.2677012485780 5.56288490575204e-09 8.70313343504907e-05 12.5530743471904 11.2234497449011 1.82805724432369 0.128411475001695 AT1G25530_at 2.24724718499894 2.23882026192043 4.95811552060475 5.62575042510496 6.42449270149214 6.15941906540834 2.4243837413419 2.89307927963690 3.50265908622844 4.0073656980242 3.21685874878727 3.14850950366251 4.40082143089387 4.12398193382692 4.32914507611594 4.80591400056980 5.84035759342622 4.64111363182976 3.66586622914552 0.272222281901338 0.278762970845344 0.280432626272376 0.292504491994833 0.277680660583325 0.293903772989177 0.273565540589005 0.279648414173218 0.278416608248563 0.267839986273869 0.270913784204266 0.267839986273869 0.271378804366363 0.272011023401512 0.275158510245580 0.279440169307381 0.278682618470757 0.271694949492142 0.271254961300723 1 1|0 -|/ 8965010 8965662 8965432.889 8964531 8967415 - gene protein_coding_gene FALSE TRUE AT1G25530.1 lysine and histidine specific transporter, putative similar to LHT1 (LYSINE HISTIDINE TRANSPORTER 1), amino acid permease/ amino acid transporter [Arabidopsis thaliana] (TAIR:AT5G40780.1); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G67640.1); similar to Amino acid/polyamine transporter II [Medicago truncatula] (GB:ABE80416.1); similar to Amino acid/polyamine transporter II [Medicago truncatula] (GB:ABE80417.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.96455127330049 16.2221040237592 5.72900957761141e-09 8.96246258321529e-05 12.5422974529207 8.14073089474109 1.96455127330049 0.148438833918523 AT1G72230_at 2.33373852088177 2.06050050285804 3.10363081440653 3.15490639765997 2.46355001967381 2.66597657394334 3.57849793734983 3.62127888870659 2.79405664331987 3.08649157283427 5.57170241805873 6.84369382577813 5.75993279800161 6.36968809109989 6.92016955544882 5.87829628112963 6.53261721209741 5.85913786798122 4.00062103341588 0.267269675721516 0.257084351490216 0.246752246526316 0.246939444038132 0.256133453207109 0.254587798483794 0.246621546653721 0.248418201489401 0.252285573505377 0.250697502924932 0.246621546653721 0.253656857227580 0.250504417581933 0.26628932203905 0.258317516004637 0.246621546653721 0.262108131527686 0.253269847234464 0.255444015782609 1 1|0 +|/ 27191969 27192726 27192397.2 27191728 27192906 + gene protein_coding_gene FALSE TRUE AT1G72230.1 plastocyanin-like domain-containing protein similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G22480.1); similar to Blue copper protein precursor (GB:Q41001); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 1.43584683099064 16.1665816434196 5.93862309288724e-09 9.28978810420351e-05 12.5290846982971 7.6280738766297 1.43584683099064 0.0599715986479338 AT4G25480_at 7.45283414846499 7.75817379193284 7.52173473105099 7.60356832505729 8.10549810706918 8.13365045329088 5.87558674095622 6.07328793952626 4.90296399991195 3.88742702296631 6.23524702590997 6.34423791459533 6.87917157933858 6.38810218674041 5.78581894042014 4.70368808418655 6.70839745336609 5.79742187103703 3.95882962504145 0.226186227896431 0.224157653569983 0.224269105118036 0.229866772538362 0.229463062872891 0.231604176371248 0.225121800416221 0.231495678640855 0.240312572518237 0.229827855161244 0.227562628764839 0.222802230359169 0.222802230359169 0.242531721324546 0.236083407771034 0.226233664361203 0.237025792580551 0.232751748616082 0.224316959390543 4 4 - 13018415 13018923 13018608.909 13018224 13019131 - gene protein_coding_gene FALSE TRUE AT4G25480.1 DREB1A (DEHYDRATION RESPONSE ELEMENT B1A); DNA binding / transcription factor/ transcriptional activator encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF3). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid. Identical to Dehydration-responsive element-binding protein 1A (DREB1A protein) (C- repeat-binding factor 3) (C-repeat/dehydration-responsive element- binding factor 3) (CRT/DRE-binding factor 3) (DREB1A) [Arabidopsis Thaliana] (GB:Q9M0L0;GB:O65612;GB:O82131;GB:Q9SAZ3); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to DREB1A [Nicotiana tabacum] (GB:ABD65969.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.45333133243651 16.142893884119 6.0305792495344e-09 9.4330320621217e-05 12.5234173778469 12.4930422036298 1.45333133243651 0.0647065605008619 AT3G18250_at 9.03199667787172 9.3453844026052 9.77581421557936 10.1995214045742 8.25121514226133 8.23853315013281 2.54985394299001 2.21606167672496 3.14081326790711 3.59854529800981 2.89865953447954 2.79037738495588 3.30981439904745 3.43837653451272 2.48579344913934 2.43238132511454 4.16112869181752 3.08731676928541 2.40259928585955 0.409434463562292 0.405016879622574 0.411984466088903 0.410309303195729 0.415366752626252 0.416816850733755 0.380184688301151 0.380184688301151 0.388800187074091 0.380366179000741 0.386313223212180 0.380184688301151 0.383918619629955 0.380184688301151 0.380184688301151 0.380184688301151 0.396747100440848 0.380184688301151 0.391871109808717 3 3 - 6258219 6258364 6258297.545 6258073 6258423 - gene protein_coding_gene FALSE TRUE AT3G18250.1 unknown protein 1.67930426510375 16.1202456192413 6.11995090400421e-09 9.5722152089530e-05 12.5179817118720 10.5124477240772 1.67930426510375 0.107978033749030 AT2G40960_at 6.32468530684789 6.06799315176777 5.05287864166291 4.31972413587409 5.19649795427509 4.46019918972248 7.1041048948815 6.52791194075624 6.90031299084891 7.8813560938119 5.11540344502619 4.52603020932022 4.15067888369898 4.48160997838276 4.36905195242684 4.95648136177751 4.87722650305966 3.57156047566952 8.08508409684936 0.239333001642806 0.2426833174151 0.239038659695917 0.249107658198997 0.245652614428772 0.243287649990053 0.261140289116886 0.249999815537008 0.262335311575328 0.243152598064765 0.253577881811425 0.239038659695917 0.242436785429965 0.240341434252089 0.243809144965829 0.239038659695917 0.250465723767442 0.247168614192708 0.251006663587518 2 2|0 +|/ 17103601 17104412 17103960.5 17102600 17104532 + gene protein_coding_gene FALSE TRUE AT2G40960.1 nucleic acid binding similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G56680.1); similar to Os05g0411600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055538.1); similar to DIP1 [Zea mays] (GB:AAZ73119.1); contains InterPro domain Single-stranded nucleic acid binding R3H; (InterPro:IPR001374) -2.43254727625644 -16.0984608741160 6.20727665929786e-09 9.70818069514185e-05 12.5127375117246 11.6958776078103 -2.43254727625644 0.210355086100644 AT3G10720_at 8.55371695759896 8.90659417083977 5.35984158849209 5.72880226151038 7.24000670854329 7.1921128721757 9.23256695155512 9.33466052211626 10.0864228293506 9.79655260082006 10.0283730291082 10.4709682533608 9.54129813087984 9.5043141915631 10.1999089789543 9.20823656345817 7.4516832654023 9.52770347908858 10.1362334086711 0.155551810373985 0.159913221222477 0.194148698880566 0.190423083319305 0.167759000376525 0.174022968202811 0.16148529423775 0.161320818060776 0.160117713543844 0.160633469128145 0.158558936491360 0.16248730762631 0.162786890755723 0.160205977235038 0.160502984415569 0.158370915482609 0.169846716058753 0.158828977078804 0.156666449372737 3 3 - 3354667 3355417 3354932.818 3354452 3357619 - gene protein_coding_gene FALSE TRUE AT3G10720.1|AT3G10720.2 pectinesterase, putative similar to pectinesterase, putative [Arabidopsis thaliana] (TAIR:AT5G04970.1); similar to pectin methylesterase isoform alpha [Vigna radiata] (GB:AAF35897.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070)|similar to pectinesterase, putative [Arabidopsis thaliana] (TAIR:AT5G04970.1); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); similar to Os01g0311800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042865.1); similar to putative pectinesterase [Oryza sativa (japonica cultivar-group)] (GB:AAT38097.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -1.57076800132542 -16.0519354460283 6.39835300788554e-09 0.000100063842690322 12.5014854528915 17.4425195954827 -1.57076800132542 0.090481482042516 AT3G54090_at 6.49951755213604 6.52269545351592 5.1291745582439 5.3041228658108 4.87644371713579 4.89099771544895 5.82393734270177 5.98096420174004 5.79390296564174 5.7903676023974 3.52912931962078 4.13169024490119 4.280604306611 3.68962302068829 5.15935277447371 5.54165316913848 5.31961940802993 4.50907126589434 6.61584785092358 0.231964149206638 0.232792431611889 0.231031523062331 0.232583447311654 0.234517350605464 0.240097081420245 0.234255084181964 0.235929474126611 0.237671967178262 0.230959208848130 0.235310189152362 0.231953115502772 0.241131065498354 0.23335899438057 0.235034934250709 0.230407314520507 0.243835892522979 0.242861496699173 0.238711921352038 3 3 + 20040233 20040749 20040541.636 20039102 20040964 + gene protein_coding_gene FALSE TRUE AT3G54090.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT1G69200.1); similar to Os01g0851000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044818.1); similar to putative kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT81682.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173) -1.35160356217405 -15.9479128959975 6.84913413400081e-09 0.000107106759587505 12.4760687478159 10.9218812150036 -1.35160356217405 0.0409570994981291 AT1G54040_at 7.80576187850685 7.98351242379657 4.17276306861514 4.59571286076521 3.52185382602728 4.14885042976965 9.63517493615394 9.6689781739191 8.44600907476172 8.93857697890505 9.63404074451765 9.70314634911075 9.6288030123582 9.3131638792493 9.8112265625119 9.95031101801145 8.93760462012203 9.57912438733096 8.3328098804841 0.170299720685180 0.170817996457469 0.186797722795236 0.196264984046815 0.185692623946433 0.18892968534562 0.170299720685180 0.172681864213592 0.185639016219935 0.175183016290602 0.170299720685180 0.171683407381298 0.171683264839845 0.17615655422825 0.172865838678139 0.171250589821062 0.179556936980501 0.182193375454552 0.176640403794088 1 1 - 20174675 20175221 20174915.545 20174383 20177617 - gene protein_coding_gene FALSE TRUE AT1G54040.1|AT1G54040.2 ESP (EPITHIOSPECIFIER PROTEIN) epithiospecifier protein similar to ATMLP-470 (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-470) [Arabidopsis thaliana] (TAIR:AT3G16400.2); similar to epithiospecifier protein [Brassica oleracea var. italica] (GB:AAY53488.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -1.83317477326594 -15.9413414097188 6.87875024901465e-09 0.000107563017643842 12.4744509506277 15.5126473912118 -1.83317477326594 0.134577034211902 AT4G04840_at 5.1789285272795 5.87031154538172 2.63765652694329 2.11362249900054 1.85197999293475 1.91986259414437 6.71487037816612 6.63213257320846 8.17135527671464 7.05548788161633 8.18281665010738 8.67118486903441 8.34689952010457 7.9834781957737 8.61554036023425 8.7807880683328 5.7729082073731 8.13766469987734 8.7564652654091 0.263244217739873 0.262283903642546 0.285079517444178 0.28236191220808 0.274329689837188 0.289762018103964 0.266499396471253 0.257869976890878 0.26154017860911 0.257648345667015 0.258410982749241 0.257648345667015 0.257648345667015 0.257648345667015 0.2680605419148 0.257648345667015 0.276106628045382 0.257991160704539 0.260961338412082 4 4|0 +|/ 2449772 2451249 2450315.5 2449558 2451587 + gene protein_coding_gene FALSE TRUE AT4G04840.1 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein similar to methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21850.1); similar to Mss4-like [Medicago truncatula] (GB:ABE84787.1); contains InterPro domain Methionine sulfoxide reductase B; (InterPro:IPR002579); contains InterPro domain Mss4-like; (InterPro:IPR011057) -1.9506532113226 -15.9387633299743 6.89040707606212e-09 0.000107738405041307 12.4738158714871 12.1428436859330 -1.9506532113226 0.151269548658350 AT3G04060_at 5.3333922623063 5.55851019747231 7.38565612210278 7.33266560572102 7.2434487637848 7.69897543986635 3.21519956370872 3.43999497850247 3.14105149611616 3.91524544498756 3.42912893764852 2.51305761278461 3.51303153174621 3.93978800450357 3.01154892951496 3.45925615943438 4.82628980651142 3.79430847672609 3.19634022567541 0.337843823494101 0.334681712336887 0.350027162148522 0.344405269140239 0.343112263425388 0.343867229676718 0.325829088854796 0.325829088854796 0.33895778247057 0.334345391596107 0.325829088854796 0.327034522764980 0.325829088854796 0.325829088854796 0.329536352775066 0.325829088854796 0.325829088854796 0.331542336990446 0.328354475134365 3 3 - 1053672 1054407 1053938.545 1053373 1055170 - gene protein_coding_gene FALSE TRUE AT3G04060.1 ANAC046 (Arabidopsis NAC domain containing protein 46); transcription factor similar to ANAC087, transcription factor [Arabidopsis thaliana] (TAIR:AT5G18270.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.58583384623515 15.8617516573054 7.24872378486818e-09 0.000113333796376414 12.4547415143265 9.3901538189923 1.58583384623515 0.0965892495713854 AT4G13560_at 5.42614089265613 4.76691195497969 3.30512812367626 2.77468973746989 2.41124936225732 2.22162475606822 5.67070914437991 4.78069363854807 7.66501970878934 6.06136341824503 5.0486683909063 4.37973377829028 4.11995724680594 4.00164472551774 4.76859616396164 4.15856224915484 3.84812183580348 4.8296531270861 6.60085085728745 0.279597560990283 0.276504985725385 0.281140981168263 0.284466726846150 0.289798707111695 0.293250707552358 0.273646612074895 0.276145037633970 0.293117506787161 0.286828423652521 0.274769996591603 0.276836754731622 0.275337192539888 0.273646612074895 0.273646612074895 0.278939464787727 0.277906078123639 0.281535979837778 0.286958877289006 4 4|0 -|/ 7879790 7880281 7880003.5 7879557 7880379 - gene protein_coding_gene FALSE TRUE AT4G13560.1 UNE15 (unfertilized embryo sac 15) similar to late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana] (TAIR:AT1G52690.2); similar to putative LEA III protein isoform 1 [Corylus avellana] (GB:CAC39160.1); contains InterPro domain Late embryogenesis abundant protein; (InterPro:IPR004238) -2.43215919226142 -15.8439148299099 7.33457510478191e-09 0.000114668747188160 12.4502949538882 9.50469937682013 -2.43215919226142 0.215036193694284 AT3G29030_at 6.94876489902205 6.73016670553401 3.66084663657951 2.86501838461348 3.90904681955227 4.05720468488855 8.31912864069192 8.24940537582557 8.04488971809467 8.26160143206976 9.47806831326273 9.7257704735738 8.256475264556 8.50427857322108 9.54655771271528 8.21097220569103 6.51167748541991 7.8700268930915 8.80735303011423 0.209100652770142 0.206224475356065 0.220814137276819 0.218149046524584 0.219076355210955 0.233664447863160 0.202248339578325 0.204505946965107 0.211815651749207 0.202248339578325 0.208441810744682 0.215190730865079 0.202248339578325 0.206807396720290 0.213908332660441 0.202248339578325 0.213407331271841 0.207986060561448 0.203169903595616 3 3 - 11012783 11013761 11013335.455 11012545 11014595 - gene protein_coding_gene FALSE TRUE AT3G29030.1 ATEXPA5 (ARABIDOPSIS THALIANA EXPANSIN A5) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A5 precursor (AtEXPA5) (Alpha-expansin-5) (At-EXP5) (AtEx5) (Ath-ExpAlpha-1.4) (EXPA5) [Arabidopsis Thaliana] (GB:Q38864); similar to ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10) [Arabidopsis thaliana] (TAIR:AT1G26770.2); similar to alpha-expansin [Cicer arietinum] (GB:CAC19183.2); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) -1.89857015104737 -15.8434975485178 7.3365967427665e-09 0.000114693016879669 12.4501907994394 14.0345776476472 -1.89857015104737 0.145606744481675 AT1G22480_at 0.777814135416038 0.646056990141785 4.56044262318848 4.30493661101479 2.36051483871474 2.15884259288030 0.827200705286975 0.774170930903854 1.2100675716045 1.00010476956342 0.91084032123346 0.69853963414228 1.19986798659492 0.946769341588153 1.19253748070864 0.964091427079497 3.50414536871845 0.601852486255595 0.84827890105051 0.255711488657534 0.256172083493405 0.278885207810972 0.29397186266393 0.272349018148895 0.274370102043512 0.259547227079069 0.256060050367458 0.268218192222979 0.258943811641655 0.262328497425747 0.258690190568488 0.253969882493452 0.261417540291519 0.259452425691454 0.254877718281703 0.28318708402567 0.261272158870586 0.256573411517686 1 1 - 7934238 7935018 7934533.818 7934156 7935371 - gene protein_coding_gene FALSE TRUE AT1G22480.1 plastocyanin-like domain-containing protein similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G72230.1); similar to Blue copper protein precursor (GB:Q41001); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 1.41136011719820 15.8244078052196 7.42973401440186e-09 0.00011614160211313 12.4454195865828 3.18715455504150 1.41136011719820 0.0614592910646219 AT1G21100_at 2.39767242891785 2.42162809696748 2.34499477514218 2.34956717877942 6.58563423820692 6.32222586294216 1.23351531973532 1.01317795098370 1.34213724975807 0.8914982158046 1.34477941551575 1.43771343172263 1.09470287324607 1.72108172830463 1.181272693931 0.926720845337108 1.47187094512135 1.06947312770424 1.12003618207129 0.193138011097960 0.196994437589597 0.199977716672640 0.193321710045501 0.207015438208769 0.230141193412013 0.199811686216572 0.190386002603481 0.195329306491447 0.200208850501089 0.190361135561718 0.195511566046006 0.194240600523079 0.192282033215086 0.195306196886144 0.195505189654516 0.196811695784082 0.210581683992433 0.19263121177762 1 1 - 7387127 7387646 7387534 7386828 7388417 - gene protein_coding_gene FALSE TRUE AT1G21100.1 O-methyltransferase, putative similar to O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G21120.1); similar to O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G21110.1); similar to O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G21130.1); similar to phloroglucinol O-methyltransferase [Rosa chinensis var. spontanea] (GB:BAD18975.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077); contains InterPro domain Dimerisation; (InterPro:IPR012967); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 1.39858419900781 15.7642858828714 7.73157156146561e-09 0.000120852195077269 12.4303111721909 4.28297319737021 1.39858419900781 0.0595789054673831 AFFX-r2-At-Actin-5_s_at 10.0380129103667 10.0373044147293 10.9489878445659 10.9100463448429 10.9514620106035 11.0582918873632 10.0470674685517 10.3652782758078 9.09507735672856 8.91401089157277 11.0041370863074 10.7737325166205 11.2222094636637 10.8562965383231 11.0724949286939 10.7414538035126 10.8045518410910 10.6948213698991 8.85925582971934 0.100134879563037 0.103282882082240 0.102189178259803 0.104666262743044 0.0998187100634 0.104880073216681 0.101774568897721 0.099263937232885 0.121453567182008 0.109575493892874 0.102790901013229 0.101505194371000 0.105258081822282 0.104293499974991 0.102147402338835 0.101484797280360 0.102429895605691 0.104153932314238 0.108859250364758 NA NA NA NA NA FALSE FALSE 1.39268937766019 15.7457013866876 7.82755386718739e-09 0.000122344666944139 12.4256156998783 20.4707198376976 1.39268937766019 0.0584780574963723 AT3G56170_at 8.88827417080422 9.115205241066 9.55418229292108 9.55636674545912 9.72152563401679 9.28103267431224 7.81974974546696 7.65896628740233 6.36913287473275 6.15489482029512 8.04086819739728 7.8750713084652 8.2813074491658 8.53686070029701 7.41876710022432 7.96259503734704 8.68633273219111 7.65215450597625 5.89163037426273 0.168471410394442 0.167515734367886 0.169082186689874 0.169924267119338 0.177617933513469 0.170497557413835 0.176955790709317 0.185871171766743 0.208062727803333 0.190731874642225 0.169907298886987 0.17718202560072 0.167515734367886 0.167515734367886 0.184799590495857 0.16837290138935 0.176264911718488 0.179257480123168 0.191645898605664 3 0|3 /|+ 20854489 20855228 20854854.111 20853556 20855437 + gene protein_coding_gene FALSE TRUE AT3G56170.1 CAN (CA-2+ DEPENDENT NUCLEASE); nuclease Encodes a calcium-dependent nuclease with similarity to staphylococcal nuclease. similar to Ca(2+)-dependent nuclease, putative [Arabidopsis thaliana] (TAIR:AT2G40410.2); similar to putative nuclease [Eucommia ulmoides] (GB:ABA41005.1); contains InterPro domain Thermonuclease active site; (InterPro:IPR002071); contains InterPro domain Staphylococcus nuclease (SNase-like); (InterPro:IPR006021) 1.53795995730595 15.7346145515171 7.88543039754877e-09 0.000123241391683290 12.4228088426077 16.0470615082544 1.53795995730595 0.090152652366474 AT3G16920_at 1.43310798230757 1.16014093737936 4.73070228777385 5.20136750528506 4.00910899590921 3.88612467054734 2.74325614278306 2.19877176804654 2.44432702730327 2.08211387951946 3.19260078727581 3.13066766076152 2.81644295105371 3.07559372033114 3.65607276398236 3.15196633635237 6.59942239410576 3.933526160017 3.40839969426681 0.274785231133487 0.271987911007191 0.270315026074173 0.268255911484400 0.267446977122191 0.26610154005357 0.266543149327369 0.265244270511438 0.271408836686624 0.266499248047246 0.266422999376559 0.269493640562773 0.263688480011638 0.265453888387257 0.263688480011638 0.263688480011638 0.277187245914122 0.263688480011638 0.268607164095473 3 0|3 /|- 5776730 5777307 5777028.2 5776492 5777895 - gene protein_coding_gene FALSE TRUE AT3G16920.1 chitinase similar to POM1 (POM-POM1), chitinase [Arabidopsis thaliana] (TAIR:AT1G05850.1); similar to chitinase-like protein [Gossypium hirsutum] (GB:AAQ56599.1); contains InterPro domain Glycoside hydrolase, family 19; (InterPro:IPR000726) 1.81129819347742 15.7322795024000 7.89767931026148e-09 0.000123424932260766 12.4222171326521 6.3400642681364 1.81129819347742 0.134896652493324 AT1G06160_at 3.43519963972654 3.54283222822580 5.57583823869808 6.1979568308774 4.78803148728792 4.46984510404546 1.06937186749162 1.15236355758198 2.52101014890116 1.88160993646950 2.34217081490299 2.35786696819151 2.02799187898673 3.02085923277866 1.890497755154 3.88720975707446 2.19105430136844 2.49771797636884 1.75863530453154 0.266001763520029 0.27571162421125 0.283271295798012 0.285283974707538 0.275681120863846 0.281889578595143 0.273717709952397 0.264770127931731 0.27050444315347 0.260600592879879 0.264290553502285 0.265260011623985 0.260600592879879 0.26274405802576 0.265757710108991 0.269452167988453 0.274543082351112 0.273033466809937 0.268162878079771 1 1 + 1883180 1883711 1883392.636 1883003 1883933 + gene protein_coding_gene FALSE TRUE AT1G06160.1 ethylene-responsive factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to ATERF15 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 15), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT2G31230.1); similar to transcription factor TSRF1 [Lycopersicon esculentum] (GB:AAN32899.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.71557269046993 15.5672400163606 8.81818224397286e-09 0.000137801733926564 12.3799104093115 6.06926631036048 1.71557269046993 0.123190918134897 AT2G21130_at 8.21996874702609 8.48737475339866 7.39081744357725 7.473676815207 8.7777505118428 9.01981041825862 4.93662912178098 5.21145989761279 4.56448174380303 4.13513694094072 5.77867173479361 5.74403522473364 5.95783861348382 6.04277981285923 5.36257467091053 4.80039486081681 6.06574325574881 5.7037563086668 3.92917765044328 0.352751961260734 0.352691318006019 0.339119272859718 0.343896117937428 0.362437680814249 0.35703832133329 0.336262822805144 0.334929020545586 0.340274046252396 0.343326076372413 0.332439945200094 0.332439945200094 0.332439945200094 0.335575705277248 0.332439945200094 0.335707939125914 0.340001978395279 0.332439945200094 0.339909255760187 2 2 - 9062724 9063200 9062955.273 9062479 9063313 - gene protein_coding_gene FALSE TRUE AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase Identical to Peptidyl-prolyl cis-trans isomerase CYP19-2 (EC 5.2.1.8) (PPIase CYP19-2) (Rotamase cyclophilin-6) (Cyclophilin of 19 kDa 2) (Cyclophilin-2) (CYP19-2) [Arabidopsis Thaliana] (GB:Q9SKQ0;GB:O22516); similar to ROC1 (rotamase CyP 1), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT4G38740.1); similar to cyclophilin [Thellun (GB:AAR27291.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) 1.46201559956138 15.4925513301789 9.2725859169667e-09 0.000144893427538522 12.36044572336 12.3854725079117 1.46201559956138 0.0797736203839367 AT1G19270_at 7.79686249318213 7.81865321801124 8.69749827512731 8.48839951589364 8.0866809518372 7.99778146284307 5.4313504771864 5.23968976958517 5.26524707016177 5.33157331071486 5.85298462354216 6.16078734344698 5.79024348542631 6.66446898504398 5.45167453865599 6.29429008801378 6.5967315634435 6.75440089367463 5.17452225463106 0.224362187226369 0.225173222961381 0.232125758779884 0.227340834426653 0.227224206184448 0.232892115885050 0.228983908946438 0.230841056173688 0.236303615348052 0.231326062499597 0.226413610752274 0.227358408453331 0.226440900051645 0.225225488669854 0.231358313680414 0.225392917262189 0.224988044592693 0.225899675726665 0.231720249145452 1 0|1 /|+ 6665127 6665760 6665520.75 6662492 6666019 + gene protein_coding_gene FALSE TRUE AT1G19270.1 ubiquitin interaction motif-containing protein / LIM domain-containing protein similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G36860.2); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781); contains InterPro domain Ubiquitin interacting motif; (InterPro:IPR003903) 1.34226727012705 15.4538200182586 9.518206977901e-09 0.000148721984029703 12.3502724794631 13.1710204714542 1.34226727012705 0.0515790210150776 AT3G29670_at 5.82127722713955 5.84181396881485 4.73038909948096 4.97740932968424 5.7176205596475 5.64905779744345 7.00530158558384 6.85897290711928 6.93480403227065 6.7190310708508 5.53430782865483 5.2296336918992 4.85882334749702 5.33455649495858 5.13740077559414 5.80839458492989 5.87638022752042 5.09081788630991 7.12230325284192 0.23534185869402 0.235778677982077 0.229459659465143 0.224655578773879 0.240396252381702 0.236262116927298 0.228033059864527 0.22947105338162 0.228748817960233 0.225247057100262 0.232665774821540 0.224171667137953 0.237141609472801 0.232950957627267 0.229489811071197 0.228517126063 0.239198813646496 0.232222876193845 0.226352034927675 3 3 + 11531213 11531748 11531459.727 11530351 11531829 + gene protein_coding_gene FALSE TRUE AT3G29670.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G29635.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) -1.33990616145882 -15.4410684277842 9.60061525466994e-09 0.000150000012738963 12.3469111643776 11.9673147126934 -1.33990616145882 0.0512059616049121 AT1G04220_at 2.38116670403548 2.5743160782185 5.15508314527035 4.60711961832706 6.34811396821481 6.0088791269717 5.00415094321009 5.46335325982691 7.17097968677942 6.23888016647314 9.20740952252477 9.02530770159026 8.49288076513923 8.66105722221752 8.70215030834507 8.29315571056573 7.198679607328 8.36155560581522 6.18304759695165 0.258205760351842 0.243563068997290 0.227654571885073 0.227645945597443 0.233767990542360 0.237928758916567 0.234858408027746 0.227479494732435 0.238747275030093 0.233647176307779 0.227490408532981 0.223355205287553 0.223180577412419 0.236717819261523 0.225978771798668 0.223323814955466 0.232380752119431 0.229147126454616 0.24121187631725 1 1 - 1119852 1120421 1120129.909 1119698 1122525 - gene protein_coding_gene FALSE TRUE AT1G04220.1 beta-ketoacyl-CoA synthase, putative Identical to 3-ketoacyl-CoA synthase 17 (EC 2.3.1.-) (KCS-17) (Very-long-chain fatty acid condensing enzyme 17) (VLCFA condensing enzyme 17) (KCS17) [Arabidopsis Thaliana] (GB:Q5XEP9;GB:O64485;GB:Q56WE1;GB:Q8VXW2); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT2G16280.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT5G43760.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT2G26640.1); similar to fatty acid elongase 1-like protein [Limnanthes douglasii] (GB:AAG28600.1); similar to putative fatty acid elongase [Zea mays] (GB:CAC01441.1); similar to beta-ketoacyl-CoA synthase (GB:AAC49186.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) 1.81792881187294 15.4356682374229 9.6357481805057e-09 0.000150539293824040 12.3454858848956 12.2046447082638 1.81792881187294 0.140964443619378 AT1G71880_at 8.62149939700415 8.71806151002466 8.97829822109689 8.96982870405266 9.20750951161516 8.76834415435879 7.47004954149961 7.60417487132562 6.7334087032245 5.7514752869119 7.78391236703574 8.60973576159748 8.00633644693078 8.30738949376063 7.18966771004441 8.54122218950242 7.51654538278076 6.15266411744842 4.66373532308250 0.236781650829784 0.236781650829784 0.245287402127365 0.249826433984972 0.236781650829784 0.244364977171102 0.239087855291471 0.239156618233023 0.260395367327623 0.257029708231038 0.251092471336113 0.236781650829784 0.238923367122099 0.239531244724027 0.264730388245951 0.236781650829784 0.246002001171969 0.255225237679089 0.254656700218409 1 1|0 +|/ 27059095 27059735 27059442.5 27057842 27060003 + gene protein_coding_gene FALSE TRUE AT1G71880.1 SUC1 (SUCROSE-PROTON SYMPORTER 1); carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family. Identical to Sucrose transport protein SUC1 (Sucrose permease 1) (Sucrose-proton symporter 1) (SUC1) [Arabidopsis Thaliana] (GB:Q39232); similar to ATSUC6 (SUCROSE-PROTON SYMPORTER 6), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43610.1); similar to ATSUC5/SUC5 (SUCROSE-PROTON SYMPORTER 5), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G71890.1); similar to SUC2 (SUCROSE-PROTON SYMPORTER 2), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G22710.1); similar to sucrose transporter SUC2 [Brassica oleracea] (GB:AAL58072.1); similar to sucrose carrier [Ricinus communis] (GB:CAA83436.1); similar to sucrose transporter SUC1 [Brassica oleracea] (GB:AAL58071.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Sucrose/H+ symporter, plant; (InterPro:IPR005989); contains InterPro domain Sucrose/H+ symporter; (InterPro:IPR013002) 1.46238828185766 15.4227472283342 9.72037966801906e-09 0.000151851771173794 12.3420712925662 15.2820410495608 1.46238828185766 0.0812162683074024 AT4G19710_at 7.06640915669294 7.17224283458265 5.20869018259489 5.55049113108519 6.29712961810481 5.88004057842209 8.76061117313047 8.52498967664003 7.17861596621193 8.13517971361646 6.36602634303071 6.97852235796784 6.55978805943278 6.50282186309273 6.70832280035267 6.75185490610015 6.69087451530702 6.85003447763994 7.69036356609887 0.223555015753446 0.217991965943959 0.23589229874886 0.226672175057809 0.220958675948926 0.226552184566308 0.226505534088900 0.220460485408874 0.231943528061739 0.223959798259284 0.217991965943959 0.220591387503326 0.225394725198202 0.222673768562195 0.224002415799824 0.220434809806228 0.223224825671342 0.240325369458639 0.220849608247886 4 4|0 +|/ 10728797 10729522 10729242.4 10724865 10729778 + gene protein_coding_gene FALSE TRUE AT4G19710.1|AT4G19710.2 AK-HSDH/AK-HSDH II; aspartate kinase/ homoserine dehydrogenase|AK-HSDH/AK-HSDH II Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. Identical to Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) (Beta-aspartyl phosphate homoserine 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (AKHSDH2) [Arabidopsis Thaliana] (GB:O81852;GB:Q3E9Y8); similar to AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I), aspartate kinase/ homoserine dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G31230.1); similar to Aminoacyl-tRNA synthetase, class I; Bifunctional aspartokinase/homoserine dehydrogenase I [Medicago truncatula] (GB:ABE90460.1); similar to aspartokinase-homoserine dehydrogenase [Glycine max] (GB:AAC05981.1); similar to aspartokinase-homoserine dehydrogenase [Glycine max] (GB:AAC05983.1); contains InterPro domain Aspartate kinase region; (InterPro:IPR001341); contains InterPro domain Aspartate/glutamate/uridylate kinase; (InterPro:IPR001048); contains InterPro domain Bifunctional aspartokinase/homoserine dehydrogenase I; (InterPro:IPR011147); contains InterPro domain Homoserine dehydrogenase, NAD-binding; (InterPro:IPR005106); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain Homoserine dehydrogenase; (InterPro:IPR001342) -1.56949887466003 -15.315311206101 1.04562253840823e-08 0.000163336696724749 12.3134411549165 13.9796174175773 -1.56949887466003 0.103473001744395 AT3G57680_at 5.6221557300713 6.15535167957222 7.76680042929619 7.35363364568051 7.80134894660132 7.49629303524749 6.84653838315857 6.57398951085558 4.02396841647892 4.65784604138518 6.231373620343 6.14159815093485 7.11655846133319 7.89813921294535 4.93950021169586 7.44977148897298 7.73794389402738 6.00587714848201 4.67859218912692 0.223292074855824 0.220526364569127 0.222679237009792 0.227072294273421 0.222413009769420 0.215229528822333 0.218312690184555 0.218111043775742 0.240702312803264 0.229307393608474 0.221451887185745 0.217122071459134 0.218907872680352 0.22527677455482 0.235849125989899 0.218897270785084 0.219926631648599 0.238212455597795 0.226938429342814 3 3|0 +|/ 21393858 21394564 21394257 21392031 21394606 + gene protein_coding_gene FALSE TRUE AT3G57680.1 peptidase S41 family protein similar to C-terminal processing protease, putative [Arabidopsis thaliana] (TAIR:AT4G17740.2); similar to carboxyl-terminal processing protease [Nostoc sp. PCC 7120] (GB:NP_487460.1); similar to Os06g0318600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057504.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S41; (InterPro:IPR005151); contains InterPro domain Peptidase S41A, C-terminal protease; (InterPro:IPR004447) 1.77081828977672 15.2875115158346 1.06563531933826e-08 0.000166452236880636 12.3059630516868 12.5237959980215 1.77081828977672 0.136521014366743 AT1G26390_at 3.53076112757717 4.05081809553589 7.57347735419442 8.42087016270384 6.35985119013571 5.7829130264549 1.28294169104767 1.38173661626966 1.57732284057206 1.94986592237304 1.68731575843423 1.45169982851764 1.66655821169587 1.40508180866478 1.60170371901327 1.43578066352779 1.84774910723322 1.69289404500074 1.3741036797681 0.315329621248841 0.321900735107838 0.335729754880622 0.32078775735881 0.333666475676818 0.35330254476344 0.297443679928304 0.295612078923482 0.30250484507247 0.295564880916561 0.298497165369958 0.293398711606487 0.295422843203974 0.293398711606487 0.299784224943037 0.293398711606487 0.294883876011364 0.293398711606487 0.293398711606487 1 1 - 9130367 9130694 9130525 9130004 9131766 - gene protein_coding_gene FALSE TRUE AT1G26390.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G26410.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G26380.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G26420.1); similar to FAD linked oxidase, N-terminal [Medicago truncatula] (GB:ABD32603.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) 2.21877364797725 15.2310904411860 1.10754571117979e-08 0.000172987564629171 12.2906965084164 6.41410217815591 2.21877364797725 0.19966278142304 AT4G36010_at 5.11390834392904 5.09705736889934 6.06874396650289 5.97569590771228 6.08283952131556 6.07391300892405 4.48806895575051 4.9953711454254 0.991217874331467 1.10387221774137 2.21403331538297 3.1057944450433 3.23433181767728 3.08119109002686 2.58602604209915 3.84204312337239 3.18745715587310 3.27148250811687 1.58007670942309 0.230049192623686 0.235628035286725 0.238571914626803 0.235269674499443 0.231183814509563 0.245789339975096 0.228392982016392 0.231035135587464 0.236184267957115 0.241018059052295 0.239186287574202 0.238671115482879 0.229551641578794 0.233359466423793 0.23333397350915 0.231367059581727 0.235495163180759 0.242139181910981 0.235727453808470 4 4 - 17039485 17040623 17040105 17039066 17041144 - gene protein_coding_gene FALSE TRUE AT4G36010.1|AT4G36010.2 pathogenesis-related thaumatin family protein similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT2G17860.1); similar to Thaumatin, pathogenesis-related [Medicago truncatula] (GB:ABE77925.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 1.48346799215648 15.2211234159935 1.11513404812107e-08 0.000174161635635549 12.2879871061171 7.6321250461562 1.48346799215648 0.089316509781118 AT1G74710_at 8.98510041143911 9.29576155666971 11.2063476497877 11.2756413438149 9.66116057717066 9.18120390481708 5.72488815143108 5.18076182393314 5.35747677274757 5.06455451301793 5.68930844569568 5.82724485611975 5.33250970478685 5.74287067265109 5.57463679127396 6.38699811033731 5.74864708119625 4.92323710948397 5.06028049648496 0.302853966474347 0.310148567650217 0.317086168637135 0.315742240428571 0.306811457464384 0.305206010594395 0.295849308598449 0.29939529778618 0.302121206875549 0.317231870953654 0.295849308598449 0.299492801934389 0.298148814431906 0.295849308598449 0.295849308598449 0.309959790384803 0.331129822269861 0.302431466755036 0.303375697461169 1 1|0 +|/ 28076373 28077354 28076854.625 28073956 28077809 + gene protein_coding_gene FALSE TRUE AT1G74710.1|AT1G74710.2 ICS1 (ISOCHORISMATE SYNTHASEI); isochorismate synthase Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870). Identical to Isochorismate synthase 1, chloroplast precursor (EC 5.4.4.2) (IcsI) (Isochorismate mutase) (Salicylic acid induction deficient 2) (Sid2) (Enhanced disease susceptibility 16) (Eds16) (ICS1) [Arabidopsis Thaliana] (GB:Q9S7H8;GB:O81522;GB:Q9ASQ4); similar to ICS2, isochorismate synthase [Arabidopsis thaliana] (TAIR:AT1G18870.1); similar to isochorismate synthase [Capsicum annuum] (GB:AAW66457.1); contains InterPro domain Isochorismate synthase; (InterPro:IPR004561); contains InterPro domain Anthranilate synthase component I and chorismate binding protein; (InterPro:IPR005801) 1.76343569269447 15.1901809394416 1.13905456594318e-08 0.000177886151563346 12.2795517593092 14.2208342726462 1.76343569269447 0.137111706038701 AT2G05630_at 8.12525802477855 8.33223437259656 8.86133875051893 8.80133171568732 9.18464359031306 8.72594344343324 5.77418530493137 6.13235256312731 5.39193966241635 5.05535441959066 6.64172765999813 6.33686552217015 6.2568065630619 6.47346241526511 6.29743859919286 6.38651440458453 6.70854015812075 5.65932965319378 4.54572996921208 0.224983174403841 0.223149129671551 0.228836383841761 0.231162871790361 0.235714302592901 0.237254798964325 0.220979691385297 0.22295729804058 0.226108479758484 0.233737216678471 0.229500992723146 0.221524132880180 0.229530208083897 0.230322581586767 0.231723763865229 0.219564324762378 0.230596611760604 0.229614177689480 0.224764135827654 2 2|0 -|/ 2083209 2084748 2083580.667 2082983 2084879 - gene protein_coding_gene FALSE TRUE AT2G05630.1 ATG8D (autophagy gene 8-related); microtubule binding in the Arabidopsis autophagy pathway similar to ATG8C (AUTOPHAGY 8C), microtubule binding [Arabidopsis thaliana] (TAIR:AT1G62040.1); similar to microtubule-associated protein 1 light chain 3 [Gossypium hirsutum] (GB:AAQ76706.1); similar to Os08g0191600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061171.1); similar to Os04g0624000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053929.1); contains InterPro domain Light chain 3 (LC3); (InterPro:IPR004241) 1.57485887341920 15.1498544246031 1.17107112436183e-08 0.000182874466780343 12.2685033391488 13.6635411235173 1.57485887341920 0.107395675121086 AT1G76590_at 8.75894790727421 8.81815973715775 8.98270320006921 9.13703321956579 10.0920850305898 9.4705834752177 5.84162866763262 5.94086481387917 4.58856272929287 5.55107712978711 5.47253351549588 5.55869089103902 6.72737102350199 6.03839367522099 5.5533598955784 6.47846281352666 7.26066829568003 6.49574941005948 5.06915581972597 0.294547504842439 0.298007742003905 0.308353343784509 0.301404226088932 0.296462805155347 0.305074804738873 0.291588752337539 0.290308510582106 0.314794883975674 0.286929722914325 0.291616152998176 0.286929722914325 0.287311614785133 0.286929722914325 0.301993471343232 0.286929722914325 0.297884581078522 0.286929722914325 0.293221124827131 1 1|0 +|/ 28746031 28746717 28746382.1 28745585 28747101 + gene protein_coding_gene FALSE TRUE AT1G76590.1 zinc-binding family protein similar to zinc-binding family protein [Arabidopsis thaliana] (TAIR:AT1G21000.1); similar to Os06g0624900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058108.1); similar to putative zinc-binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD35686.1); contains InterPro domain Protein of unknown function DUF597; (InterPro:IPR006734) 1.60462804014276 15.1435597790336 1.17615639472443e-08 0.000183656821036219 12.2667731434639 14.0141268812307 1.60462804014276 0.112610034213411 AT1G19020_at 8.42327691651183 8.6341232568491 9.11491376434757 9.36474618557114 8.32348260338929 8.2952005323892 4.05464926509116 4.70161260819855 7.44434927911816 6.18181842648322 7.63456005239013 8.4800297147403 6.43142875148464 8.01239283777402 7.33927181202403 7.00628445715989 6.65547940211042 7.36124298792728 5.34362527539415 0.204077669008178 0.206264480365554 0.207370233300462 0.205041422149485 0.215996649555535 0.213625095710877 0.232460599237483 0.232155279484361 0.209242826066802 0.213195034657755 0.203531140497726 0.205383789167736 0.207529987725847 0.212996630332456 0.225600809386771 0.212387315115753 0.23519929239246 0.204639475169286 0.246672570398947 1 1 + 6568135 6568368 6568238 6568064 6568588 + gene protein_coding_gene FALSE TRUE AT1G19020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48180.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE82379.1) 1.68149609235723 15.1250203580544 1.19127397388080e-08 0.000186005518281747 12.2616683935833 14.4581759310184 1.68149609235723 0.125537276576326 AT2G27200_at 7.34982492506919 7.44646397526091 7.87637799961749 7.57944830318235 8.03443551125673 8.21537791016705 5.04816527194433 5.16440324722923 4.97406341122911 4.29087331566072 5.59385194304651 5.28096464719649 5.82988116967313 6.00587221101128 5.28200344848301 5.41371953627921 6.14695970550349 5.6848089907454 4.53509315771328 0.26445079964981 0.266637954413324 0.270433339647761 0.271067759115465 0.269409364206023 0.267876712645778 0.266123667184290 0.26817432625343 0.272388991571588 0.275398462116537 0.272926042541315 0.265319289964815 0.267271508585745 0.270617414116811 0.268922007915603 0.263846649282163 0.263741248959428 0.269540702144163 0.288086405543798 2 2 + 11634468 11634920 11634694.909 11632495 11635267 + gene protein_coding_gene FALSE TRUE AT2G27200.1 GTP-binding family protein similar to GTP-binding family protein [Arabidopsis thaliana] (TAIR:AT1G08410.1); similar to GTP1/OBG [Medicago truncatula] (GB:ABE78155.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain GTP-binding; (InterPro:IPR005289) 1.36447166056897 15.1153857865297 1.19921364848974e-08 0.000187233226938703 12.2590103223806 12.2166959769793 1.36447166056897 0.0656143710954176 AT4G26670_at 7.46197843539191 8.04092353959725 7.06557314750476 7.14432072543348 8.7987306144655 7.95235373189652 4.86698395244063 4.7705099387653 4.24157920483668 3.98220316834155 6.73757798341482 7.22995368048799 6.51084728294807 6.75630383784203 6.87822972518973 5.67647557123256 5.99546183200331 6.38934496031917 3.47458736618416 0.252729683438574 0.242211435573417 0.244491511877648 0.243191717492915 0.252984697399872 0.245547394033966 0.246135760618437 0.243517197059933 0.246134823942804 0.243022472070722 0.240948640325911 0.250856115923259 0.250121407238722 0.241458311446059 0.24816712210982 0.243719677330815 0.23794531914166 0.238222351907321 0.242027614371299 4 4 + 13452368 13453543 13453062.364 13452123 13453990 + gene protein_coding_gene FALSE TRUE AT4G26670.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein similar to protein translocase [Arabidopsis thaliana] (TAIR:AT5G55510.1); similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94438.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) 2.03873168383427 15.0652786789581 1.24144506451665e-08 0.000193814403472339 12.2451283572138 12.2232872301705 2.03873168383427 0.178761336250452 AT3G51240_at 3.44520682140693 3.66913321357332 2.80674782189102 2.96886638528981 2.56368118003737 2.86216821384665 7.56724789069537 7.62128361090782 3.81748401666218 5.29030798358147 4.16823986253127 4.67170467448909 4.66049761494776 4.86130188533554 3.9266373177017 4.47429083986864 4.71303994253186 4.63694856304301 4.40086462129436 0.194701601725758 0.189884949369563 0.191991293021036 0.200442868517134 0.194738742008333 0.189884949369563 0.215902333518435 0.219642218121342 0.199770118825579 0.197721842242264 0.189884949369563 0.192661862107641 0.191057827685107 0.194309457509082 0.196994394391366 0.189884949369563 0.217464592021711 0.195406746994526 0.192723896483376 3 3|0 +|/ 19037029 19037609 19037317.8 19036243 19037918 + gene protein_coding_gene FALSE TRUE AT3G51240.1 F3H (TRANSPARENT TESTA 6); naringenin 3-dioxygenase Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Identical to Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavanone 3- hydroxylase) (Naringenin 3-dioxygenase) (FH3) (TRANSPARENT TESTA 6 protein) (F3H) [Arabidopsis Thaliana] (GB:Q9S818;GB:Q38877;GB:Q9C526;GB:Q9C528;GB:Q9C530;GB:Q9C563;GB:Q9C5V7); similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT5G24530.1); similar to flavanone 3-hydroxylase (GB:AAC49176.1); similar to Naringenin,2-oxoglutarate 3-dioxygenase (Flavonone-3-hydroxylase) (F3H) (FHT) (GB:Q05965); similar to flavanone 3-hydroxylase 1 [Brassica napus] (GB:ABB91635.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -1.38207746841811 -15.0613612562635 1.24481430176367e-08 0.000194327960648326 12.2440389381990 8.69652595624042 -1.38207746841811 0.0710240936298259 AT4G31800_at 9.05932778166754 8.84726426558356 10.8400075804316 10.9024875294135 6.96299692800195 6.77763510218683 2.67176759025334 3.03129480295966 3.10347146742791 3.72174336616508 3.31889540032935 2.94916745210521 2.78756126828315 3.40781967797328 3.24260039983047 3.726562205392 3.48698490287469 2.97557751461857 3.26482485827355 0.226684565187102 0.224921149341672 0.226247396340067 0.226914971775965 0.240503553577795 0.235054700517045 0.221507045024661 0.220636290674252 0.232543200524894 0.223558667225268 0.220636290674252 0.225323419491127 0.227190495003087 0.222659811079792 0.220636290674252 0.220636290674252 0.231151252899864 0.226885707615297 0.220636290674252 4 4 + 15384056 15384771 15384406.909 15383207 15385035 + gene protein_coding_gene FALSE TRUE AT4G31800.1|AT4G31800.2 WRKY18 (WRKY DNA-binding protein 18); transcription factor Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. Identical to WRKY transcription factor 18 (WRKY DNA-binding protein 18) (AtWRKY18) (WRKY18) [Arabidopsis Thaliana] (GB:Q9C5T4;GB:O81768;GB:Q944H8); similar to WRKY60 (WRKY DNA-binding protein 60), transcription factor [Arabidopsis thaliana] (TAIR:AT2G25000.1); similar to WRKY1 [Brassica rapa subsp. chinensis] (GB:AAS13378.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.42095885680639 15.0575138918015 1.24813296877659e-08 0.000194833556426026 12.2429684195388 10.6867190308779 1.42095885680639 0.0797730386210764 AT1G27120_at 4.50113845837557 4.60061465003958 2.76712491004158 3.09214507808825 3.42962635818517 3.52568325448819 7.18550968677409 7.57032115844624 6.31265444701741 7.17427352388057 7.43561913182388 7.9108825698182 6.63048722049306 7.20533722188153 6.86535227991201 6.19722913014305 5.03133254708631 6.08896443765745 7.07463746726931 0.241633926375508 0.243293590457706 0.248357471001774 0.242386156216003 0.243079680314243 0.244829856878135 0.249227600308503 0.23988238921139 0.247811979523688 0.240359442849694 0.242497376010035 0.240196789042869 0.23988238921139 0.242786786149512 0.240651360171254 0.23988238921139 0.24923883188682 0.243576724910351 0.23988238921139 1 1 + 9423096 9423870 9423584.091 9421164 9424056 + gene protein_coding_gene FALSE TRUE AT1G27120.1 galactosyltransferase family protein similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G21060.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G62620.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G74800.1); similar to galactosyltransferase family-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83183.1); similar to galactosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99414.1); similar to Glycosyl transferase, family 31; Ar (GB:ABE93312.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Galectin, galactose-binding lectin; (InterPro:IPR001079); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) -1.47197783345595 -15.0469745562458 1.25727340704615e-08 0.000196247806105833 12.2400329183524 11.3462733010087 -1.47197783345595 0.0903935955343577 AT3G15310_at 0.157173015868291 0.445123385783845 1.27077024989214 0.785389230538438 0.432946298271139 1.09246211340814 5.09776673613147 4.81328521358951 3.78179000307437 5.20151406080986 2.75201614037451 2.48217125998538 1.80878338582591 2.74656915544115 1.78523441317862 2.53710790553358 1.84178738439014 1.93677151506397 3.84417386235956 0.452395219191946 0.434277292021991 0.464301155104404 0.454358232285340 0.437691913895636 0.434277292021991 0.485058240771304 0.477693859639498 0.475916368222833 0.465777355717563 0.461896779372844 0.434277292021991 0.445176456460047 0.434277292021991 0.441655097901221 0.459714315949206 0.434277292021991 0.450696610793435 0.467733941769236 3 3 - 5152638 5152849 5152732.8 5152106 5153649 - gene protein_coding_gene FALSE TRUE AT3G15310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G32621.1); similar to hypothetical protein 24.t00017 [Brassica oleracea] (GB:ABD64939.1); contains InterPro domain Protein of unknown function DUF635; (InterPro:IPR006912); contains InterPro domain Bacterial adhesion; (InterPro:IPR008966) -1.88623297262812 -15.0288535003984 1.27315993572589e-08 0.000198714802768097 12.2349755380044 5.01793009062975 -1.88623297262812 0.158077738824196 AT4G23300_at 8.0832664090452 8.07080150394336 6.54892353816062 6.19976444728201 7.5829348787301 7.16139937852885 8.5633475326193 8.3543155639818 8.49419342101824 8.38176398808912 7.1174929850989 6.80583694173633 6.66981516103393 7.05495440966677 6.67343831352454 6.624051971338 6.44307716729825 6.60932203244046 8.32522348052241 0.207807732068734 0.209280510175567 0.217107064124138 0.208729154265243 0.201371349411545 0.224919032124754 0.201371349411545 0.204494588732627 0.210816701041652 0.201371349411545 0.206741649181848 0.203249875080869 0.207924440062104 0.204879619885383 0.201371349411545 0.201371349411545 0.209973615748628 0.219306101740454 0.202782871325953 4 4|0 +|/ 12183772 12184498 12184232.9 12181942 12184714 + gene protein_coding_gene FALSE TRUE AT4G23300.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23210.3); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11530.1); similar to CRK11 (CYSTEINE-RICH RLK11), kinase [Arabidopsis thaliana] (TAIR:AT4G23190.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.52266109941573 -14.9689509253922 1.32724955567082e-08 0.000207143838153545 12.2181655433164 15.1456652828583 -1.52266109941573 0.101418594768820 AT1G67600_at 2.69170966608238 2.74666428068124 4.00996930052854 4.14317710656919 5.17837792665448 4.73155874276898 2.10693128587477 2.36060400094459 2.43102418519757 2.76074484438075 3.40209958411431 2.99428443182536 3.60514357415294 3.66695357839403 2.6449230518939 3.32291487949474 3.87054395011215 3.1736188302817 2.09002169745529 0.225236095531459 0.228320825777003 0.227517873338789 0.226483966864348 0.240752975045555 0.237012431815617 0.226313561788717 0.234640277874337 0.225522653122238 0.228101032988621 0.222930125258076 0.222930125258076 0.223752052706421 0.235527577603612 0.229438214282967 0.228262993102688 0.224248624461511 0.235928409276126 0.231536333328524 1 1|0 -|/ 25340369 25341092 25340776.4 25340089 25341325 - gene protein_coding_gene FALSE TRUE AT1G67600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24350.1); similar to Os08g0127500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060903.1); similar to Acid phosphatase/vanadium-dependent haloperoxidase related [Medicago truncatula] (GB:ABD32415.1); similar to Os01g0901800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045113.1); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase; (InterPro:IPR008934); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase related; (InterPro:IPR003832) 1.47354506004516 14.9607580783796 1.33483966771793e-08 0.000208315078544060 12.2158554282379 6.37728594411877 1.47354506004516 0.0923472545897428 AT1G10140_at 8.50998870912962 8.39263140054657 9.16692662728415 9.17773678067445 9.46757403691126 9.45218121924326 6.1686701030708 6.50524056582706 5.76652589172929 5.48068486260124 6.16334524492772 5.27947095846291 6.49683002859729 6.41040341194806 5.94744431105141 7.05528731176267 7.68324584319462 6.26306886102634 5.74563039395633 0.250594360232121 0.252685397229264 0.264731048058540 0.265346244596710 0.268693847262113 0.268788565881408 0.251238377124220 0.262296898298421 0.258628465024611 0.252836986636376 0.257621831395780 0.256911912651118 0.248651596421275 0.249839750385992 0.253267747457647 0.248651596421275 0.262869551943273 0.254581087742192 0.254933290801366 1 1 - 3322973 3323420 3323206.273 3322804 3323550 - gene protein_coding_gene FALSE TRUE AT1G10140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58420.1); similar to Os07g0123800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058800.1); similar to Os03g0769700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051398.1); similar to hypothetical protein MtrDRAFT_AC140720g19v1 [Medicago truncatula] (GB:ABE79597.1) 1.33503929249693 14.9554542591102 1.33977846380643e-08 0.000209072429276994 12.2143585046402 14.3934523699027 1.33503929249693 0.0617701435619283 AT2G29120_at 8.68808962333885 8.80901013510301 7.85419667177982 7.91745885373804 7.95279236444918 7.75679812022477 7.21158490827991 7.00268643225969 7.47653712215153 6.10854911761353 4.40201779329458 3.82049365608291 4.33256915610892 4.91410033030302 3.49393909656342 3.68506538551114 4.38181523184693 4.04916818915882 6.48387904531929 0.235098712316098 0.235098712316098 0.237029856398986 0.236452329039894 0.240298671915662 0.243223297398907 0.237799023741723 0.243073748460203 0.260579037470876 0.235098712316098 0.238365234162297 0.242507078803119 0.243954039711205 0.247657223817941 0.252478324598576 0.251017824047691 0.246416705038860 0.242450824513909 0.235098712316098 2 2 - 12518605 12519233 12518839.727 12518369 12522972 - gene protein_coding_gene FALSE TRUE AT2G29120.1 ATGLR2.7 (Arabidopsis thaliana glutamate receptor 2.7) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 2.7 precursor (Ligand-gated ion channel 2.7) (GLR2.7) [Arabidopsis Thaliana] (GB:Q8LGN0;GB:O81080;GB:Q8RY02); similar to ATGLR2.2 (Arabidopsis thaliana glutamate receptor 2.2) [Arabidopsis thaliana] (TAIR:AT2G24720.1); similar to ATGLR2.8 (Arabidopsis thaliana glutamate receptor 2.8) [Arabidopsis thaliana] (TAIR:AT2G29110.1); similar to ATGLR2.9 (Arabidopsis thaliana glutamate receptor 2.9) [Arabidopsis thaliana] (TAIR:AT2G29100.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); similar to Glutamate receptor 2.7 precursor (Ligand-gated ion channel 2.7) (GB:Q8LGN0); similar to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GB:Q9LFN5); contains InterPro domain GPCR, family 3, metabotropic glutamate receptor-like; (InterPro:IPR000337); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) -1.30614513118341 -14.9096606843372 1.38325662822214e-08 0.000215843364267783 12.2013873818848 13.3113527385901 -1.30614513118341 0.054909399695445 AT2G31890_at 6.13322114638065 6.32535618507596 5.40242314685926 5.45972390722494 5.66246510139301 5.68869073625286 6.47956196905174 6.449639826796 5.94424703456545 6.81888764532933 4.05333648338702 4.13235327137548 4.6804944883964 4.18329441820526 5.59369651625351 5.70619197119387 5.67137215309037 4.75117875095122 6.88988929810982 0.170628490529176 0.170628490529176 0.176663294569730 0.17511785175429 0.171604643818861 0.175264570376161 0.172476345618448 0.170628490529176 0.186772648059447 0.180260273262131 0.175880314804989 0.1852624791834 0.170628490529176 0.172092810602589 0.177708792950712 0.173084710978695 0.172926826710149 0.173223701232878 0.179792015950949 2 2|0 -|/ 13564445 13565037 13564768.2 13564008 13566844 - gene protein_coding_gene FALSE TRUE AT2G31890.1 similar to Os03g0425000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050400.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAP20833.1); contains InterPro domain RAP domain; (InterPro:IPR013584) -1.24906864747757 -14.9014898638299 1.39117446606104e-08 0.000217064951939504 12.1990641747522 11.6488841270167 -1.24906864747757 0.0353736469363549 AT3G10050_at 4.72982620404715 4.48072015934695 3.32932971750333 3.97401263055814 3.67717174180144 3.84972860822778 7.24969217876852 7.78718826141992 5.23809731595469 5.98099732427031 3.8722222597887 4.29906241644294 4.05196715338920 4.19920255660366 4.19565050201557 5.46075711060782 4.98607031363465 4.51282392498998 6.10837350383844 0.225510818991069 0.217984928181843 0.219872681563339 0.219134137285901 0.217984928181843 0.219716898234792 0.218517151080789 0.22866362864684 0.228666856873668 0.221064934245552 0.219531622560706 0.217984928181843 0.220668744546269 0.221339188839150 0.220929953350813 0.223102347048122 0.221687803323211 0.225447768733822 0.218184741128814 3 3|0 -|/ 3099209 3100027 3099514.2 3098730 3101766 - gene protein_coding_gene FALSE TRUE AT3G10050.1 OMR1 (L-O-METHYLTHREONINE RESISTANT 1); threonine ammonia-lyase first enzyme in the biosynthetic pathway of isoleucine Identical to Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) (OMR1) [Arabidopsis Thaliana] (GB:Q9ZSS6;GB:Q9SPF1); similar to ATSR (ARABIDOPSIS THALIANA SIGNAL-RESPONSIVE), serine racemase [Arabidopsis thaliana] (TAIR:AT4G11640.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74610.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74611.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74612.1); contains InterPro domain Serine/threonine dehydratase, pyridoxal-phosphate-binding site; (InterPro:IPR000634); contains InterPro domain Threonine dehydratase, C-terminal; (InterPro:IPR001721); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926); contains InterPro domain Threonine dehydratase I; (InterPro:IPR005787) -1.84144960568835 -14.8711186601181 1.42104039224915e-08 0.000221710721998712 12.1904052489713 9.9962298098951 -1.84144960568835 0.154431076146551 AT4G00700_at 8.46039953439865 8.78147228729118 9.83188944428287 9.82384990013572 8.38979312636983 7.95929554945993 1.09571380058151 1.04998628392332 3.16659500476441 1.74396929856842 0.847647496856001 1.02719158746536 1.19307405140148 1.19324055342344 0.809328896419849 1.93860172831298 1.47498929172530 1.71386099411145 2.56588153339546 0.215145239312426 0.221785727982885 0.210838247421305 0.21530111173682 0.221782755529596 0.237208441898614 0.220159559648181 0.211814012806880 0.227273912633436 0.217808708593263 0.215905675987086 0.214368217123001 0.216502654196721 0.227311306224004 0.22518647452531 0.216090445156988 0.210557630525812 0.216747386030509 0.217173399926228 4 4 + 288693 289342 289032.455 286051 289514 + gene protein_coding_gene FALSE TRUE AT4G00700.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G22610.1); similar to NTRB (NADPH-dependent thioredoxin reductase B) [Arabidopsis thaliana] (TAIR:AT4G11610.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G61300.1); similar to C2 [Medicago truncatula] (GB:ABD33426.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to H0306F12.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86177.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.46845362061757 14.8601565820503 1.43199080065486e-08 0.000223404884810165 12.1872708078725 8.807495209409 1.46845362061757 0.0932845729990018 AT1G51090_at 7.55501332430755 7.27167677924727 8.73559118689552 8.65315920135012 9.27214208024985 8.7720963592659 8.29233723408854 7.43751491868064 3.44674189109146 4.51521163971284 6.05551587263672 5.23387607115426 6.91721698605566 7.29514277045408 5.27681234758005 8.3344797806035 7.28773940217358 5.6533149421698 3.24589952339986 0.320113223038219 0.323389958764000 0.320113223038219 0.329703799993360 0.328191242614546 0.331420131216229 0.320113223038219 0.325143563410852 0.348277898069863 0.327424009047293 0.323651942788464 0.320174474863798 0.322611498364687 0.322002007637708 0.333589927172406 0.320113223038219 0.32197689149528 0.325561907471845 0.339350387901409 1 1 + 18936847 18937387 18937183.545 18936605 18937618 + gene protein_coding_gene FALSE TRUE AT1G51090.1 heavy-metal-associated domain-containing protein similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT4G16380.1); similar to unknown protein [Glycine max] (GB:AAN03471.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.99496144819737 14.7382851581130 1.56011286445387e-08 0.000243377606854803 12.1520946691772 13.3700480303464 1.99496144819737 0.178828492061407 AT4G35180_at 2.74884289407185 2.98491865426026 7.72992997273297 8.1257345885019 2.59898746655768 2.16079273809907 1.20416458084469 0.8097347594726 1.48954231334303 0.65146214775356 1.36910641366545 1.08006229083097 1.13874426119052 0.749658787609108 1.01490007964153 1.03582004795153 0.999090936919863 1.10069126262409 0.727605105865501 0.255926213349966 0.260573676280533 0.27801017485491 0.282104102122160 0.247158626284274 0.248459516381222 0.243921278932030 0.243921278932030 0.247649242669716 0.266007987620143 0.245541222537879 0.260607660089714 0.245585990781657 0.246329040043807 0.245254411446875 0.243921278932030 0.252944283353438 0.247939008950187 0.247440523216984 4 4 - 16738525 16739154 16738814.909 16738344 16740470 - gene protein_coding_gene FALSE TRUE AT4G35180.1 LHT7 (LYS/HIS TRANSPORTER 7); amino acid permease similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT1G47670.1); similar to ORF [Lilium lon (GB:BAA04838.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.66087602018866 14.7199302495590 1.58046674093097e-08 0.000246537006917823 12.1467440955958 4.55399443133837 1.66087602018866 0.129500235965077 AT1G49010_at 6.92544628409203 6.33886770342187 5.49644900755764 5.42824651886908 5.25281293403573 4.92787475978578 7.8558062386768 7.56876450113169 7.41984473177519 7.57588401435126 5.86636963136768 6.26421146568136 5.45996503886172 6.09905971537532 6.72379776318142 6.01504157198354 5.97389095030378 6.74198882469246 7.60233750144405 0.227012217812219 0.218363079318269 0.225482037370654 0.227390590657706 0.222715356850091 0.229918150496289 0.218363079318269 0.225874276182946 0.226594110323275 0.218612632752385 0.221415066198896 0.221578294422066 0.223245986109558 0.228824216594349 0.219787315427846 0.220578082973375 0.230053326713335 0.219842184651096 0.218363079318269 1 0|1 /|+ 18137033 18137384 18137251.5 18136313 18137593 + gene protein_coding_gene FALSE TRUE AT1G49010.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G08520.1); similar to MYB transcription factor MYB109 [Glycine max] (GB:ABH02851.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.6427617528889 -14.7081805642017 1.59364756186278e-08 0.000248577146699357 12.1433116759401 13.0621481781319 -1.6427617528889 0.126779967999788 AT1G75680_at 8.81116957617568 8.92225821085032 6.0487990293504 6.35680156784466 7.74436751155428 7.5959891628669 10.2432613953110 10.2221511983512 10.1847348159714 10.3436304540741 10.7583941917259 10.7618662463329 10.1595911254885 10.1435356757231 10.4072049113262 9.94635794729982 9.39842141245554 10.4858505134335 10.2909598298343 0.167720641578993 0.165533245119049 0.213309115008155 0.206880099708875 0.188715381864749 0.187890003875993 0.164173897928213 0.162334778936696 0.168470345008629 0.165017318431584 0.165653201865728 0.163909585155474 0.167750798981376 0.162671327654088 0.163268520417535 0.162334778936696 0.168871470754863 0.162334778936696 0.162334778936696 1 1 - 28420890 28421544 28421132.545 28420713 28423190 - gene protein_coding_gene FALSE TRUE AT1G75680.1 glycosyl hydrolase family 9 protein Identical to Endoglucanase 10 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 10) [Arabidopsis Thaliana] (GB:Q8LCP6;GB:Q9LR07); similar to glycosyl hydrolase family 9 protein [Arabidopsis thaliana] (TAIR:AT1G19940.1); similar to Os06g0715300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058583.1); similar to Glycoside transferase, six-hairpin, subgroup [Medicago truncatula] (GB:ABE81087.1); similar to Os09g0533900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063771.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Glycoside transferase, six-hairpin, subgroup; (InterPro:IPR012343); contains InterPro domain Glycoside hydrolase, family 9; (InterPro:IPR001701) -1.31433819546070 -14.7006050360465 1.60220917280855e-08 0.000249896564682949 12.1410956147141 18.5084802663379 -1.31433819546070 0.0623160264663306 AT3G47800_at 10.3683231603265 10.308852552292 9.84004755666346 9.43042425019172 10.1475193683868 10.0079682877177 4.77256206120266 4.14586793550827 6.46821610040713 6.37384436612858 6.88447501915838 8.1313180325439 7.3327137523812 7.24636131537001 6.74751577975957 6.19310236500755 7.30496651633866 5.84686591904176 5.36100037672875 0.293959140568409 0.295977405767217 0.293707049919558 0.296309636554761 0.296404873845312 0.293238831888846 0.294738143012349 0.293825841220125 0.304912865874534 0.295313399268315 0.293376135490570 0.292855937303731 0.29601348906795 0.298714023933115 0.292855937303731 0.292855937303731 0.299566996563104 0.292855937303731 0.295764048581998 3 3 + 17647455 17647956 17647689.545 17645795 17648189 + gene protein_coding_gene FALSE TRUE AT3G47800.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G15140.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE81353.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) 1.67540816405143 14.6997035757154 1.60323129963546e-08 0.000250039953491146 12.1408317530076 15.1419965391386 1.67540816405143 0.132197004522241 AT2G04570_at 8.30408873786009 8.64707208236597 8.82760792460108 8.81943052360376 10.5833365410450 10.3513435750696 8.75408219691341 8.82109318890416 8.56617828569733 7.78762062265525 10.2663710736988 9.95439655103463 9.82979068180824 9.94757245178054 9.78279573825982 8.72521456661403 8.7997178154657 9.74488473025922 7.45631068647894 0.125111518339134 0.123002884109732 0.128712116743923 0.121337709892091 0.120548889039239 0.116590445331768 0.117223436560957 0.120141135511551 0.119020307343753 0.126253764294907 0.117560258664356 0.115807833395474 0.113892889095690 0.119324982041270 0.115192197746536 0.117315952324329 0.126670793746721 0.113377218370345 0.140738308313022 2 2 + 1595433 1596074 1595679.273 1594670 1596346 + gene protein_coding_gene FALSE TRUE AT2G04570.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT2G42990.1); similar to GDSL-motif lipase/hydrolase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22300.1); similar to Os06g0636700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058145.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 1.35424267120345 14.6854787974921 1.61945440765727e-08 0.000252553914874151 12.1366636251736 17.9225299209915 1.35424267120345 0.0726037335967391 AT2G40100_at 7.97756889678657 8.22327209274438 6.28071121389391 6.69701370939125 6.30704003026707 5.92477488010503 8.9283774849183 8.90797122040076 8.71850105352346 9.69060679415817 8.40450720006062 8.85974838154234 7.13479835546098 8.1889038922276 8.96757784565597 9.00044683744496 7.01269413445778 8.20659096132418 8.73369067463274 0.204276560755922 0.201808076070127 0.213339360507654 0.205820748809569 0.214429309269614 0.226912965957183 0.201059536649086 0.216236231980598 0.220396731435234 0.205735475341003 0.197885249170137 0.204139887447554 0.209952609557206 0.197323314321318 0.195463878570099 0.201085371928108 0.217885939857406 0.211498667154710 0.197897239835880 2 2 + 16753248 16754244 16753831.273 16752881 16754478 + gene protein_coding_gene FALSE TRUE AT2G40100.1 LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II Identical to Chlorophyll a-b binding protein CP29.3, chloroplast precursor (LHCII protein 4.3) (LHCB4.3) (LHCB4.3) [Arabidopsis Thaliana] (GB:Q9S7W1;GB:Q8L9J2); similar to chlorophyll A-B binding protein CP29 (LHCB4) [Arabidopsis thaliana] (TAIR:AT5G01530.1); similar to Chlorophyll A-B binding protein [Medicago truncatula] (GB:ABE80774.1); contains InterPro domain Chlorophyll A-B binding protein; (InterPro:IPR001344) -1.51630176085725 -14.6231569527426 1.69266653806365e-08 0.000263954419945646 12.1183026502805 16.0405951702934 -1.51630176085725 0.106709060048043 AT3G15270_at 1.77758833645446 2.00283725922262 1.49558171782733 1.7039760330642 1.74965657162953 1.97475058176292 2.57507838312371 2.90576326563322 7.60723565739328 4.75995839405872 4.44630178257494 2.88397156371189 2.63406151738985 3.54260339983153 4.10909773414862 2.52860683275294 2.103344830364 2.87313297341335 3.79005747691535 0.235438516809689 0.2431492852788 0.254532510153696 0.242054102548631 0.239446339932400 0.240622048679254 0.240448493723783 0.240053520072254 0.281838904198611 0.264292638593521 0.257870422292626 0.236395558999022 0.242746908094547 0.235438516809689 0.238697001328527 0.239749079459011 0.240044828554659 0.240936561549571 0.24665227709196 3 3|0 -|/ 5140656 5141230 5140959.9 5140372 5141353 - gene protein_coding_gene FALSE TRUE AT3G15270.1 SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5); DNA binding / transcription factor Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. Identical to Squamosa promoter-binding-like protein 5 (SPL5) [Arabidopsis Thaliana] (GB:Q9S758;GB:Q9SMW8); similar to SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G53160.1); similar to SBP transcription factor [Gossypium hirsutum] (GB:AAV51939.1); contains InterPro domain SBP; (InterPro:IPR004333) -1.41496800760995 -14.6219565282216 1.69411160145197e-08 0.000264162822014406 12.1179473891587 6.28609931295434 -1.41496800760995 0.0872485723471356 AT2G29350_at 9.53033760346456 9.35834404393992 11.2833871728366 11.2356691734115 9.0434910326768 8.39492345927261 3.19571318538645 2.82461329148647 3.95461227370720 4.59802843506867 3.05468597617194 2.9451514993249 3.48004559858704 3.65669683603614 3.30225759563623 4.67596952984885 4.53916519401195 3.53559246333679 3.68320479214198 0.295574808532935 0.296961077439350 0.295069593695886 0.300164972331178 0.294217429954105 0.297281717597296 0.276648961674474 0.273207388937909 0.284481491887882 0.282801265229424 0.2744206232438 0.274176513371841 0.279216604011586 0.272699573829825 0.278284499795353 0.279377691057614 0.278506933941423 0.272794831271931 0.294247949713402 2 2|0 +|/ 12608624 12609238 12608896.5 12607991 12609633 + gene protein_coding_gene FALSE TRUE AT2G29350.1|AT2G29350.2|AT2G29350.3 SAG13 (Senescence-associated gene 13); oxidoreductase senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29290.1); similar to Tropinone reductase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95188.1); similar to Os03g0269100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049677.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347)|similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29290.1); similar to Os03g0269100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049677.1); similar to Tropinone reductase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95189.1); similar to Tropinone reductase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95190.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347)|similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29290.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06907.1); similar to Os03g0269100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049677.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.66609804906332 14.5769031909390 1.74932875125346e-08 0.000272755338895440 12.1045700909680 11.9719652471053 1.66609804906332 0.132949893990858 AT3G10840_at 6.39249791427727 6.29960054215377 4.48973669514857 4.13028057171425 5.42158166129831 5.03445845945363 8.1297436701025 8.00250125150716 6.63967268868629 7.05884489887291 6.25851144588159 7.18552910617855 6.3006084413726 6.57428633826931 6.77635326076186 6.55341668637619 6.08605924474119 5.8813660241454 7.03397290525369 0.184264263997653 0.181275365381286 0.190244168030815 0.205811654070045 0.177131391066738 0.197242449680318 0.188058893459063 0.181434058577617 0.188102903714055 0.177131391066738 0.194446450499778 0.182205904592441 0.187171523885971 0.177131391066738 0.180380624786249 0.181725456276846 0.186700331515090 0.185268419191519 0.185476694928929 3 3|0 -|/ 3391320 3392032 3391627.8 3391070 3393295 - gene protein_coding_gene FALSE TRUE AT3G10840.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G15490.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95656.1); similar to Os12g0118400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066007.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639) -1.44794267170580 -14.5437817729098 1.79117000834243e-08 0.000279261316000668 12.0946807977384 12.6689733370753 -1.44794267170580 0.0953990628579198 AT4G28085_at 4.49683552673375 4.27861924129602 6.33546917023244 6.26695319845664 5.830794445967 5.61935936579100 2.78340278001505 2.75194704515739 3.48348147925964 3.42759806512039 3.7061492126849 2.89926729716142 3.89985900407438 3.7521606540127 2.62945909412485 3.57579132114224 3.86725278300572 3.78679940379626 3.32281361667592 0.2434375476636 0.234705225796411 0.237041142235709 0.239188406718920 0.239480053647377 0.251718587536615 0.250213816467194 0.250299751788328 0.235992149985707 0.234187851083845 0.232808710859557 0.235213200514145 0.232876567680729 0.231301754937494 0.239579621437996 0.231301754937494 0.235857112538314 0.235807724604859 0.234268286160889 4 4 + 13960062 13960242 13960167.545 13959976 13960580 + gene protein_coding_gene FALSE TRUE AT4G28085.1|AT4G28085.2 unknown protein 1.26936876135477 14.5176783188554 1.82491271009275e-08 0.00028450389150346 12.0868539684869 8.2583676300073 1.26936876135477 0.0541766252793112 AT4G21850_at 3.60787864873304 4.1527734411384 8.62266213625285 8.88019548120765 4.48790497504651 4.65646027265479 2.20861362265404 2.45010839394784 2.89372373231112 2.86712508186187 2.70409832596475 2.28336154290834 2.28568798155441 2.14103218726503 2.47379403166955 2.62195654105817 2.44141423242152 2.58654271359769 2.88833859302918 0.301502193705470 0.311415299994830 0.354741388554609 0.343286017694173 0.311741830399251 0.307002984502291 0.307563883278007 0.30487154199076 0.307444380516272 0.306476522474265 0.303763335997245 0.310063089581403 0.300934952265137 0.310489908617197 0.302854319506671 0.300934952265137 0.303692661459813 0.308108052371454 0.303261798152086 4 4 - 11591390 11592120 11591716.273 11591128 11592250 - gene protein_coding_gene FALSE TRUE AT4G21850.1|AT4G21850.2 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein similar to methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21830.1); similar to Mss4-like [Medicago truncatula] (GB:ABE84787.1); contains InterPro domain Methionine sulfoxide reductase B; (InterPro:IPR002579); contains InterPro domain Mss4-like; (InterPro:IPR011057) 1.55806783257983 14.5165608282761 1.82637258588929e-08 0.000284713222414282 12.0865182510467 7.54597382826555 1.55806783257983 0.116084001911104 AT1G65690_at 6.14828030109035 6.42341463012533 8.01770715345896 7.8465533526278 6.02425780813938 5.54352671337053 1.50071426353609 1.45310530608547 1.43044461043534 1.54434696629852 1.31737809205173 1.79783947419985 1.47717972044659 1.31015074696188 1.50021097639765 1.12045837263107 1.72844715048796 1.40692720570233 1.50505676639222 0.425688290258225 0.412576707189994 0.416301265694864 0.415138516748557 0.394468096599816 0.416758943568278 0.383440362477121 0.383440362477121 0.398687931927011 0.384019697134179 0.383440362477121 0.386677519218679 0.383440362477121 0.383440362477121 0.383440362477121 0.390106357317073 0.389551421135722 0.389581832112643 0.386613116316662 1 1 - 24435309 24436356 24436156.273 24435093 24436616 - gene protein_coding_gene FALSE TRUE AT1G65690.1 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related similar to NHL25 (NDR1/HIN1-LIKE 25) [Arabidopsis thaliana] (TAIR:AT5G36970.1); similar to Os04g0677300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054263.1); similar to unknown pollen protein [Petunia integrifolia subsp. inflata] (GB:AAS90599.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 1.47033690900386 14.4938820515118 1.85627598985688e-08 0.00028935630129889 12.0796935027826 6.84499831525519 1.47033690900386 0.100663909271954 AT1G15290_at 8.30783052843348 8.34897497140618 6.80009447783294 6.85787844046567 7.6330766816837 8.07668681400028 9.31331223826505 9.41040081386713 9.7644844622953 9.5870919219483 8.34557082808476 9.05916468394208 8.22450324332944 8.13037501799406 8.63997670089034 8.47575324948232 8.04666170767133 8.48206249688174 9.58816464848769 0.167493469737188 0.162470398675997 0.187517543479131 0.185150444662031 0.176204846508877 0.166354093797753 0.169800225426378 0.164398466361715 0.170899601709074 0.164291355165196 0.164790255428338 0.163943162326372 0.167074583582267 0.168930428667619 0.164770178803394 0.164959026411839 0.168085997131749 0.168533663831071 0.16329042199764 1 1 - 5257326 5257894 5257650.091 5257041 5264809 - gene protein_coding_gene FALSE TRUE AT1G15290.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT4G28080.1); similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT1G01320.1); similar to putative tetratricopeptide repeat(TPR)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84544.1); similar to TPR repeat [Medicago truncatula] (GB:ABE77904.1); similar to H0811D08.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86110.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -1.36213369385328 -14.4452848366177 1.92216330394976e-08 0.000299607594186649 12.0649945104861 17.1295762883834 -1.36213369385328 0.0795389041685413 AT4G09020_at 9.4879049640422 9.1496230012752 9.27571512141076 9.18056720745193 10.0530141293274 9.47148775410935 7.6994056193609 7.37860896401144 7.38919010658952 7.28916992963124 9.6115352322542 9.43592520089693 8.64794931574546 9.51300394498393 9.07852901750113 8.51593883478432 8.6751160343301 9.23667952079964 5.99712568674431 0.213151448561148 0.214889884275975 0.221292894289906 0.216423307194701 0.222232596538543 0.225904572440794 0.213151448561148 0.232639981783427 0.242521086520431 0.258032281592054 0.213151448561148 0.213151448561148 0.222278305637785 0.213151448561148 0.217600802447179 0.213151448561148 0.230739956662905 0.221042005606228 0.248966622028976 4 4|0 +|/ 5787876 5788760 5788371.125 5784073 5788999 + gene protein_coding_gene FALSE TRUE AT4G09020.1 ATISA3/ISA3 (ISOAMYLASE 3); alpha-amylase Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated. similar to ATISA1/ISA1 (ISOAMYLASE 1), alpha-amylase/ isoamylase [Arabidopsis thaliana] (TAIR:AT2G39930.1); similar to isoamylase isoform 3 [Solanum tuberosum] (GB:AAN15319.1); similar to isoamylase isoform 3 [Pisum sativum] (GB:AAZ81837.1); similar to isoamylase [Hordeum vulgare] (GB:BAD89532.1); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193) 1.63190823962135 14.4345858466630 1.93700782008588e-08 0.000301902038838585 12.0617447081342 16.9526224511155 1.63190823962135 0.130029735749327 AT3G15500_at 3.16536217875993 3.29332860097801 4.29406879236129 4.24046179008115 5.3222225210517 5.44430947467554 2.09506897496206 2.16395799783370 1.87751448608676 2.15619570226238 1.87423061135752 1.93900826649086 2.12286955281827 2.24840845766140 1.56368234808107 2.51653537544139 3.25469778259912 2.67383132143762 1.99365962280521 0.245611510393449 0.242254294813897 0.247776913883440 0.248766671111910 0.255945424674027 0.25217360557247 0.241805578218477 0.243341000015210 0.239755502629246 0.243203200685171 0.237972490562896 0.238871797918329 0.256981089242651 0.241588999210865 0.257811705848553 0.245589836841373 0.243442484719426 0.239783412001213 0.243804298301857 3 3 + 5235247 5235842 5235612.909 5234627 5236095 + gene protein_coding_gene FALSE TRUE AT3G15500.1 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3. similar to ANAC019 (Arabidopsis NAC domain containing protein 19), transcription factor [Arabidopsis thaliana] (TAIR:AT1G52890.1); similar to NAC4 protein [Glycine max] (GB:AAX85981.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.20543545025506 14.4135270783332 1.96659172692263e-08 0.000306493320640891 12.0553336031961 5.89398815877327 1.20543545025506 0.0341317313530561 AT4G15210_at 1.22716327415320 1.04806430902162 1.33026180157301 1.02910788026427 1.13176856540694 1.3655055776982 1.19991776935226 1.14186984331813 1.37657762989353 1.25706467337665 5.45289864945818 6.25832070414474 1.49710789247797 3.83823328661638 4.99354868721515 3.67652514057262 1.75912337855186 4.14951055659688 1.43398931457826 0.226864651110216 0.217493900455896 0.215793513583813 0.220763561397833 0.220276552882192 0.215793513583813 0.215793513583813 0.215793513583813 0.218880445279357 0.222029390016483 0.227723770385387 0.230028711223467 0.222999793418347 0.223011766243678 0.225971818777018 0.220206142027444 0.215793513583813 0.231578104500286 0.218882870048798 4 4 - 8666798 8667434 8667177.273 8666338 8669470 - gene protein_coding_gene FALSE TRUE AT4G15210.1|AT4G15210.2 ATBETA-AMY (BETA-AMYLASE); beta-amylase cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. Identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) (BMY1) [Arabidopsis Thaliana] (GB:P25853;GB:O23375); similar to BMY5 (beta-amylase 5), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G32290.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O65015); similar to beta-amylase [Glycine max] (GB:BAA09462.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O64407); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554)|Identical to Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) (BMY1) [Arabidopsis Thaliana] (GB:P25853;GB:O23375); similar to BMY5 (beta-amylase 5), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G32290.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O65015); similar to beta-amylase [Glycine max] (GB:AAZ38831.1); similar to beta-amylase [Glycine max] (GB:BAA09462.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) 1.32859424413952 14.3631863330624 2.03932230564973e-08 0.000317807988112455 12.0399294400114 3.83872524905030 1.32859424413952 0.073578291936691 AT4G15430_at 2.12035441263478 1.91478190006776 1.73023320308701 1.95753595833444 1.51166742020449 1.31105296622842 3.25891520161276 2.94446161542693 3.58530774463242 3.64462942771822 1.29821272542423 1.32734753004994 1.91258046308341 2.00567493858083 1.26051929153057 2.22610557157554 1.84997281962909 2.03859513227252 3.34847717040848 0.196323182414596 0.199104019258188 0.196989859677013 0.198261485184324 0.196550571916441 0.197590372682904 0.202206394705813 0.196323182414596 0.216944642491427 0.198959797234314 0.209713001534326 0.2036904177036 0.209130861562785 0.202131269995324 0.196323182414596 0.196323182414596 0.196323182414596 0.196323182414596 0.199255857968986 4 4 + 8830684 8831267 8830965.778 8827876 8831503 + gene protein_coding_gene FALSE TRUE AT4G15430.1 similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT3G21620.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G22120.2); similar to Protein of unknown function DUF221 [Medicago truncatula] (GB:ABE86757.1); similar to Os05g0594700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056508.1); similar to Os01g0534900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043256.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) -1.35913397535337 -14.2227560154009 2.25813063667359e-08 0.000351884497112846 11.9963658126521 4.72663242133523 -1.35913397535337 0.083543260078854 AT1G64380_at 9.29725825949214 9.6816330467654 10.4096179306449 10.4184260855928 10.9698775973841 10.8761689798246 9.7471314289411 9.7238423698463 8.39616192625105 9.27337593067626 10.9518084273564 10.6198809220013 10.5051575289987 10.3618979736192 10.1680060722541 10.4468093979020 10.4632355184646 10.0343186355538 9.0996783353466 0.105673651673695 0.0961418307850803 0.0945612224574667 0.093953667160716 0.0995172531616202 0.0970477357093881 0.097380851544585 0.103719934097488 0.111823226985433 0.110097074660811 0.0981262240655094 0.0954630354980164 0.0975728753697506 0.101858284053657 0.100490219130805 0.093953667160716 0.102639139159989 0.101348485031186 0.112058052950919 1 1 - 23894667 23895086 23894916.455 23894309 23895836 - gene protein_coding_gene FALSE TRUE AT1G64380.1 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. similar to RAP2.4 (related to AP2 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G78080.1); similar to Os05g0572000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056377.1); similar to apetala2 domain-containing protein [Atriplex hortensis] (GB:AAF76898.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.28843680876391 14.1457325848961 2.38888420938374e-08 0.000372235937506175 11.9720959150229 19.8239751491164 1.28843680876391 0.0686015504975975 AT4G37400_at 5.43040202470748 5.35051190455043 7.83220613058658 7.93096404097372 7.15436844280062 6.99962192469968 6.24638286423109 6.32576948273398 4.06085436758038 4.297572627649 4.14891924206301 4.84649514906163 5.11821911112187 4.84647906581351 3.61084163552305 6.70124895077267 6.00950671172378 3.79353091182809 4.09926121150259 0.210054565323284 0.212666375077662 0.206687594024411 0.21131224798074 0.208321105988783 0.206687594024411 0.211305255376542 0.210735673175753 0.222239367431866 0.215877137950744 0.208340263011251 0.213319011467424 0.207380424919726 0.219735905278742 0.236043460304117 0.208375191199916 0.211481698126206 0.224344588551421 0.214340496709075 4 4 + 17585598 17586159 17585903.636 17584045 17586354 + gene protein_coding_gene FALSE TRUE AT4G37400.1 CYP81F3 (cytochrome P450, family 81, subfamily F, polypeptide 3); oxygen binding member of CYP81F similar to CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37430.1); similar to CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G57220.1); similar to CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37410.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 1.18643296368527 14.1034844385331 2.46408239260079e-08 0.00038392867759113 11.9586687749913 11.1772622683183 1.18643296368527 0.0372707987439605 AT1G69870_at 9.13477912352366 9.04222870069348 9.43720032193962 9.62944522082636 9.70307813738948 9.45678869375511 7.95690543938832 7.82024640222513 5.94747311653126 5.85682986990099 6.42778554695907 6.63063016028537 7.38108446251027 7.37178071342246 6.32175492809579 8.04845497199953 8.08531050225498 6.65115616712026 5.20837679332032 0.257732525993328 0.257893567811805 0.26162760636226 0.263598902088672 0.257953390175516 0.265222535766444 0.254129055301359 0.254129055301359 0.277059685177857 0.267814048250728 0.269363158887958 0.259275102568512 0.260736113296819 0.254129055301359 0.270676301725648 0.254129055301359 0.254683424957429 0.263489262284351 0.285287430311100 1 1 + 26323165 26323547 26323340.818 26319690 26323883 + gene protein_coding_gene FALSE TRUE AT1G69870.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G27080.1); similar to Os03g0687000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050937.1); similar to nitrate transporter NRT1-5 [Glycine max] (GB:BAB19760.1); similar to Os01g0913300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045170.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.25596979934172 14.0945302325156 2.48034842160136e-08 0.000386438284085492 11.9558124566447 15.4154029757169 1.25596979934172 0.0611492675195115 AT3G05640_at 9.06086212848396 9.01640446950466 9.35127826028833 9.29935973833567 10.1856651610532 9.9991842298231 9.14718809227036 9.03020900605114 7.46870673089248 8.310934698892 10.3663757725957 9.66790651982664 9.80544412268627 9.61860145920301 9.66010433473952 8.73150328510962 9.39196170976899 9.77923408928202 7.88914404860524 0.130387959603606 0.130511026342281 0.133121643630248 0.133936601563781 0.131251645757539 0.130387959603606 0.131315280986304 0.134287995593129 0.154923365742871 0.150193237404020 0.134038373989936 0.130387959603606 0.132154442946631 0.144323806653704 0.140019056819585 0.130387959603606 0.144225062216374 0.134569014083346 0.149391661480825 3 3 - 1640658 1641439 1641052.182 1640399 1643259 - gene protein_coding_gene FALSE TRUE AT3G05640.1|AT3G05640.2 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT5G27930.2); similar to Protein phosphatase 2C-like [Medicago truncatula] (GB:ABE85677.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 1.19162608774289 14.0914568787707 2.48595829690679e-08 0.000387287443075109 11.9548312305002 18.1448871712837 1.19162608774289 0.0398894794087752 AT1G01720_at 8.09294353133833 8.22740237670645 8.81493483266698 9.22683504821277 9.64048536117562 9.45002379760059 7.88738324000943 7.84696796304835 5.99277665584124 6.4562277318609 6.99090929212771 7.17687329321755 7.9667213116933 7.20545024688322 7.01484201624892 8.25751953333107 8.337125991879 7.84576467587139 6.13406513314014 0.231938800709640 0.228206442014367 0.245690057539996 0.237137084680948 0.248717855355833 0.23880916254769 0.228687800484955 0.234596843713853 0.258624900035451 0.236361707994252 0.251272428328139 0.233330329521272 0.23136285410164 0.252269687252902 0.239729760023016 0.225817217651324 0.232898438856088 0.228595898219816 0.232941827589705 1 1 + 268889 269420 269210.818 268330 269819 + gene protein_coding_gene FALSE TRUE AT1G01720.1 ATAF1 (Arabidopsis NAC domain containing protein 2); transcription factor belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding. Identical to NAC domain-containing protein 2 (ANAC002) (ATAF1) [Arabidopsis Thaliana] (GB:Q39013;GB:Q9LQ85); similar to ANAC032 (Arabidopsis NAC domain containing protein 32), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77450.1); similar to NAC-domain protein 18 [Brassica napus] (GB:AAP35054.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.33721988517372 14.0563078064601 2.55110728893813e-08 0.000397411493470782 11.9435781943164 15.5452506698968 1.33721988517372 0.0822055138761474 AT3G08760_at 7.32603836392174 7.02629476077175 8.09248409343268 8.20618225699975 7.7843063063772 7.79657551724967 6.15707110537889 6.34769149370084 5.89437138532445 5.40092862945014 7.2558395439364 6.94284839200419 7.43089064064501 7.41098416545253 6.74754232038694 7.09579811303144 7.02065241366742 6.04903372994888 5.87376957888326 0.173022667864224 0.173844029405926 0.178641032684667 0.178091729298056 0.180202824976253 0.179472952680360 0.169362364195270 0.177246878864637 0.182061965485842 0.172752962980218 0.170440801266169 0.177701995872106 0.175119150293753 0.178651829966405 0.172276912352716 0.171747150480274 0.177222057603154 0.193077216739873 0.177107062169901 3 3 - 2658158 2658583 2658384.545 2657924 2660895 - gene protein_coding_gene FALSE TRUE AT3G08760.1 ATSIK; kinase Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15080.1); similar to Os01g0822200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044652.1); similar to putative protein kinase AtSIK [Oryza sativa (japonica cultivar-group)] (GB:BAD73441.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 1.26339428978484 14.0383839111949 2.58504206959372e-08 0.000402672003180614 11.9378177838023 13.7006914186141 1.26339428978484 0.0645798098988594 AT3G28510_at 7.60547210333441 7.9328345769052 10.3055792154225 10.1962976595043 5.0533891457849 4.44856204755887 1.77867789736706 1.77741775176846 2.03780190426142 1.79200336874782 2.2011931485675 1.90267135944087 2.15225184194796 2.15168001883822 2.20818845210161 1.80144254962259 1.89999853953695 1.99750196207506 1.28048972197700 0.38808236512983 0.369634170901588 0.376154087357254 0.376718354570524 0.360624891756639 0.376303872643089 0.338653260824044 0.338653260824044 0.343809189916041 0.338653260824044 0.338653260824044 0.348355334318187 0.348350436857424 0.344598610054592 0.338653260824044 0.338653260824044 0.338653260824044 0.339959504061494 0.342238774865055 3 3 + 10687891 10688423 10688121.727 10686761 10688601 + gene protein_coding_gene FALSE TRUE AT3G28510.1 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28540.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE78548.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.53164537687239 14.0377949461784 2.58616543611348e-08 0.000402821128329036 11.9376282478094 8.0086776242116 1.53164537687239 0.120509439726209 AT3G47010_at 4.9475057697258 4.51789627265891 2.83666716680355 2.47029235909535 2.95559751429710 3.06917477434779 3.79944218414446 3.42314392934795 5.80032320986506 5.43780840931575 4.24532230062545 4.37341421904091 3.60803706750728 3.30753576034969 4.73044622400352 3.62000310861629 3.6419521204257 3.83225095854451 5.63564558361906 0.218473098806304 0.218743909620852 0.213976700961612 0.235282506770189 0.218719300943613 0.214315780121664 0.213388250955668 0.214088521943268 0.220410512745782 0.217939025676672 0.210513442973047 0.216218788650616 0.216403782965373 0.218656088469261 0.214892056219409 0.211272989678100 0.216369069038841 0.231558330179401 0.227857797466585 3 3|0 -|/ 17327775 17328389 17328009.556 17327638 17330516 - gene protein_coding_gene FALSE TRUE AT3G47010.1 hydrolase, hydrolyzing O-glycosyl compounds similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G47050.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G47040.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G47000.1); similar to putative exohydrolase [Oryza sativa] (GB:AAL58976.1); similar to exo-1,3-beta-glucanase [Lilium lon (GB:BAD13764.1); similar to exo-beta-glucanase [Lilium lon (GB:AAR14129.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) -1.52189313318873 -14.0240396101805 2.61255331088789e-08 0.000406905178170789 11.9331970207161 8.27469630671384 -1.52189313318873 0.119055444759832 AT1G61800_at 2.85871412567803 3.37953071397714 8.14589080967084 8.47078853896588 2.54268404631222 2.83810902353580 1.49713875953938 1.11106909062242 2.02176630702740 1.29837562892020 1.04248369586259 1.41836545201490 1.54533891763096 1.59804380919918 1.49286806344993 1.29778017452977 1.87741338970686 1.68401884431400 1.35453166459066 0.219149147604736 0.225527998199352 0.242741202866499 0.237677451384144 0.222180020829725 0.221660517111846 0.219512025067928 0.219498955396409 0.222195819488376 0.227125598447416 0.223117821352604 0.229072379780764 0.223220333949465 0.218165020428287 0.222318470926515 0.220104149738200 0.218596427158351 0.221496766435086 0.222742360414176 1 1|0 +|/ 22829167 22829949 22829613.6 22828105 22830439 + gene protein_coding_gene FALSE TRUE AT1G61800.1 GPT2 (glucose-6-phosphate/phosphate translocator 2); antiporter/ glucose-6-phosphate transporter glucose6-Phosphate/phosphate transporter 2 Identical to Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor (GPT2) [Arabidopsis Thaliana] (GB:Q94B38;GB:O80688); similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to glucose 6-Pi/Pi transporter [Thellun (GB:ABJ98060.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696) 1.61203472099636 13.9696272306466 2.71984270796684e-08 0.000423588303338756 11.9155815560585 5.38187242696335 1.61203472099636 0.135506792141217 AT4G21870_at 5.8291889062062 6.18294738732054 3.68560406556322 4.19386227336161 6.26055697193356 5.57333953872691 6.07710489571976 6.6106479139949 8.2063344406763 7.74262751767401 5.1298023965281 3.74455519391569 4.50168381500249 5.85330460496567 4.34292995467905 8.64835774972952 5.24815476642367 4.08245981472996 7.4816366108333 0.274465633652742 0.267397131796368 0.270987110437660 0.271366729191996 0.270925832893129 0.279976164200861 0.2738825656502 0.267397131796368 0.291019172994101 0.269376872776394 0.267397131796368 0.270759030217314 0.267397131796368 0.270716060263419 0.268079381771919 0.267397131796368 0.281247245661178 0.273031269355789 0.272109035296541 4 4|0 -|/ 11603770 11604237 11603956.3 11603580 11604343 - gene protein_coding_gene FALSE TRUE AT4G21870.1 26.5 kDa class P-related heat shock protein (HSP26.5-P) similar to HSP18.2 (HEAT SHOCK PROTEIN 18.2) [Arabidopsis thaliana] (TAIR:AT5G59720.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83716.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) -1.93146252473923 -13.9679028531146 2.72332019706500e-08 0.000424102654288932 11.9150210333197 12.0537092741323 -1.93146252473923 0.184804833346873 AT3G25290_at 2.3964709689165 2.44627884375172 4.94229210195224 4.56889941098573 4.67241342116852 4.78983926408674 3.16515120593004 2.80219445131572 2.711056356869 2.62325682037836 2.48480135194498 3.23581857390653 3.52824167187701 3.38217996286883 3.03298747808825 3.97507199348175 3.9457770379565 3.46690970433087 2.67202731822057 0.213857091829782 0.217298899148980 0.223423202517132 0.226574528523828 0.222909060920895 0.245096277405025 0.22130271345226 0.216376284564508 0.2366781362176 0.220632669575953 0.219349988370734 0.220704626195505 0.213857091829782 0.215487612442265 0.223611671543745 0.219201374256736 0.232366925515123 0.220990298136959 0.213857091829782 3 3|0 +|/ 9210791 9211522 9211294.9 9210174 9211836 + gene protein_coding_gene FALSE TRUE AT3G25290.1|AT3G25290.2 auxin-responsive family protein similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G12980.1); similar to hypothetical protein 26.t00022 [Brassica oleracea] (GB:ABD65002.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 1.37676524436034 13.9570504892524 2.74531701355262e-08 0.000427500765350414 11.9114901684453 6.7480692769948 1.37676524436034 0.0927788258809897 AT4G35770_at 10.4299616063022 10.2642642529300 7.93792047409326 7.7471066522832 11.1365458343821 10.7298695943552 7.37370276856078 7.55790523836756 9.57987014730848 8.92394865140843 6.357666726034 5.56244723368987 6.56495630959308 6.77777623800285 4.94076701362216 6.53338765483355 6.89945371993787 6.78799224893663 9.98291052736803 0.216226742854804 0.222790124023384 0.221675324532243 0.221351106933649 0.223406507597313 0.225938542911652 0.226697023713906 0.216782207973781 0.228832430427117 0.21606491476043 0.221630045428863 0.226067577199428 0.221329419770133 0.222951282255157 0.246918691034303 0.218275039409299 0.228388443612653 0.227015499224219 0.21606491476043 4 4|0 +|/ 16945085 16945935 16945427.4 16944946 16946197 + gene protein_coding_gene FALSE TRUE AT4G35770.1|AT4G35770.2|AT4G35770.3 SEN1 (DARK INDUCIBLE 1) Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant. similar to senescence-associated family protein [Arabidopsis thaliana] (TAIR:AT5G66040.1); similar to din1 [Raphanus sativus] (GB:BAA20356.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) -1.35555918835439 -13.9345429092434 2.79155625113548e-08 0.000434673223864306 11.9041494933285 17.0464757202141 -1.35555918835439 0.0887791747576194 AT4G38370_at 4.48995488131595 4.72358719959007 5.76800997989229 5.60946084247341 6.41694686645958 6.30801471162524 5.77225555021692 5.87697516122143 3.8410438110018 4.69023512737151 5.83094202404199 5.83388434115018 5.75318803908219 5.97766327980518 6.10438917068413 5.8483752241585 6.41143900980186 5.80683469876049 4.40556671113027 0.232168159410027 0.225167365064938 0.222418844708211 0.223519346582796 0.228772833695506 0.234671756666913 0.225490718618287 0.222883855733547 0.250255346413528 0.229268643623230 0.228024678774316 0.221338025377006 0.226438368058997 0.22330748803894 0.222970887790816 0.223454109865586 0.237256346396937 0.220119961578762 0.229724088022634 4 0|4 /|- 17970131 17970994 17970539.111 17969901 17971289 - gene protein_coding_gene FALSE TRUE AT4G38370.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to H0515C11.13 [Oryza sativa (indica cultivar-group)] (GB:CAH66037.1); similar to Os04g0224600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052277.1); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078) 1.22173624614712 13.9273835506415 2.80644129821436e-08 0.000436962910131976 11.9018094949829 10.7497113274011 1.22173624614712 0.0554191992211471 AT1G72040_at 6.54509811160059 6.6349136580353 5.28178220549411 5.58414066838522 5.51040362119331 5.52673617755829 7.38866776163462 7.45147633253917 5.65314458890711 5.88135403303841 4.63910657078597 5.0044573406938 5.17798398389592 4.36267491466335 5.34410136881713 5.35693507271921 5.79902613762289 4.69775908306092 6.32328492871637 0.252333175156924 0.251357169682792 0.246183488564451 0.248116166099487 0.246183488564451 0.258555562852931 0.250875782473123 0.255899304705095 0.250970404910896 0.246814400990321 0.255315766716756 0.248607439281316 0.246183488564451 0.246590639917349 0.254828382451656 0.246183488564451 0.255494527192908 0.250447352807139 0.247778387601848 1 1|0 -|/ 27115861 27116552 27116214 27115556 27118004 - gene protein_coding_gene FALSE TRUE AT1G72040.1 deoxynucleoside kinase family similar to unnamed protein product [Homo sapiens] (GB:BAD18437.1); contains InterPro domain Deoxynucleoside kinase; (InterPro:IPR002624) -1.21705612782479 -13.8626837100077 2.94494081252642e-08 0.000458497835102238 11.8805520210014 11.7405773550149 -1.21705612782479 0.0557276703823336 AT3G21870_at 5.28912821723124 5.61318347970471 4.56781559330098 5.10105827506663 5.16680514057983 5.20940620809503 7.62698194337173 7.65310108815021 7.83074329624097 7.51190632725884 5.45726993810609 6.66500676287579 6.2753850632886 6.19652533118362 6.731662037434 7.2714576588091 6.32696636184987 5.66736320534741 7.69908920925255 0.255485499504954 0.247253344387141 0.255421540687176 0.25890810552502 0.256514318714252 0.259149802222362 0.243360381770287 0.246904525176138 0.252912398556045 0.251000666921388 0.241982833616125 0.245871592264473 0.249739212773662 0.247571259219540 0.250508724276256 0.241982833616125 0.258930929008356 0.241982833616125 0.252100116923780 3 3 - 7703944 7704720 7704391 7703873 7704836 - gene protein_coding_gene FALSE TRUE AT3G21870.1 CYCP2;1 (cyclin p2;1); cyclin-dependent protein kinase similar to CYCP3,1 (cyclin p3,1), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G45080.1); similar to PREG-like protein [Picea mariana] (GB:AAC32127.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Negative regulatory factor PREG; (InterPro:IPR012389) -1.44547622195475 -13.8578115252966 2.95566730634641e-08 0.000460138286252010 11.8789431338154 12.7807020710772 -1.44547622195475 0.108329542344494 AT2G47630_at 2.78653877425 2.47249435757664 1.48556940627239 1.72414285636555 1.87330831330277 1.81957599118977 3.44552093659749 3.87111802506881 5.40333853621922 4.70202692396374 3.60604894772734 4.86892363368639 3.20513956456249 3.40218921994077 4.38789994944512 3.10182275985292 2.18995891766692 4.17312555647730 4.92161525773064 0.258475540863222 0.253682671038588 0.261637086613649 0.257022773642773 0.260782790374422 0.256938604206091 0.256010138886292 0.255224577477259 0.272060446118367 0.268801136633561 0.253682671038588 0.263112752729883 0.259020557812847 0.261153777987461 0.255730997846227 0.253682671038588 0.256330995263652 0.256463662775897 0.259541411364059 2 2 + 19543309 19543957 19543743.909 19541573 19544084 + gene protein_coding_gene FALSE TRUE AT2G47630.1 esterase/lipase/thioesterase family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62860.1); similar to Os05g0363100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055317.1); similar to Alpha/beta hydrolase [Medicago truncatula] (GB:ABE84979.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -1.40518694277929 -13.8427845437325 2.98901877843020e-08 0.000465300553238229 11.8739737559540 6.74772465323181 -1.40518694277929 0.100842210635547 AT1G69690_at 3.69450561235271 4.36521867754399 4.88029921796817 4.51880882589582 5.53693186104544 5.25228208197337 3.90461565087016 4.09966084244885 2.78997513776757 2.68685682744954 5.82641183163241 5.46892024354758 5.32999124126302 5.79704970115202 4.75122627855137 4.74687471870196 3.75384594077498 4.69779886218632 2.84232266626193 0.263715841639909 0.258592301379329 0.258592301379329 0.264634903387470 0.260679358801443 0.267317514879455 0.260280238915476 0.261572458217556 0.275255970245277 0.273917231281773 0.269986385171175 0.258805008735347 0.258592301379329 0.267750663713883 0.264946243888869 0.260948577408632 0.264185326966991 0.260175262092005 0.271464484967952 1 1 + 26220509 26220964 26220713.818 26219887 26221514 + gene protein_coding_gene FALSE TRUE AT1G69690.1 TCP family transcription factor, putative similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G47620.1); similar to TCP-domain protein [Medicago truncatula] (GB:ABE91240.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) 1.65227180465832 13.8324419325574 3.01221118364807e-08 0.000468880792846659 11.8705471691632 8.44132354428859 1.65227180465832 0.144746488091758 AT1G70690_at 4.94241791904804 4.87153961076351 7.92517500406584 7.97661000382474 4.61824473248237 4.66664601856759 2.44208774672813 2.77833530022196 2.81005803783081 2.84317271406839 2.43382204889654 2.58772913742243 3.21818622693333 2.83200524650228 2.25316400111136 3.14074946645326 3.39542620707043 2.51286606834671 2.97009656970502 0.220594463986569 0.233481955215541 0.228657217655099 0.231246689277171 0.228595660449365 0.229641342545535 0.211838340316427 0.214424948152162 0.216397969793598 0.217338828618681 0.224455726970931 0.209882600922207 0.210717110403202 0.226835360788276 0.212916053174955 0.215340382527994 0.214769812597390 0.217888030649852 0.20891775747614 1 1 + 26656079 26656870 26656320.636 26655676 26657306 + gene protein_coding_gene FALSE TRUE AT1G70690.1 kinase-related similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G01660.1); similar to receptor-like protein kinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25786.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 1.23018745267601 13.8222993449406 3.03514516716122e-08 0.000472420345268644 11.8671818398279 7.86322503740117 1.23018745267601 0.0607109688652443 AT1G20030_at 6.89289993191149 7.17045621245335 6.1918809314966 6.41433766987265 7.78094971869955 7.34084204727886 6.25574415049685 6.48244901392763 3.73396152314467 3.98391572363046 5.79633363543426 6.17564956690215 6.22365259020389 7.00615178991915 5.85707441861864 5.06551612880502 5.98920474751992 5.71442590943204 2.38082020486782 0.216836359527536 0.224778470584130 0.234087730951513 0.222642870286626 0.224015627136421 0.228526033075949 0.223469023279823 0.222636991138445 0.249282785562299 0.230321769660161 0.237698143285527 0.216836359527536 0.216836359527536 0.222957272945809 0.229414736490205 0.217706965932073 0.220068110322741 0.221227823874733 0.248033081375149 1 1 + 6946207 6946971 6946586.273 6945416 6947335 + gene protein_coding_gene FALSE TRUE AT1G20030.1|AT1G20030.2 pathogenesis-related thaumatin family protein similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT1G75800.1); similar to Os03g0244200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049533.1); similar to SCUTL1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94928.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938)|similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT1G75800.1); similar to Os03g0244200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049533.1); similar to SCUTL1 [Vitis vinifera] (GB:AAF06346.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 1.42194193955650 13.7739793561060 3.14704179332852e-08 0.000489805584713651 11.8510807613280 11.4885617506348 1.42194193955650 0.105494433464569 AT4G03320_at 2.66290736988486 3.28864149606673 5.33883483916182 6.39593537703298 6.45955701580187 5.93394317090584 1.22499981374718 1.37136300147174 1.47825404874567 1.74678473319439 2.37590463814268 1.88676325625137 2.35415898960623 2.30065001574709 1.45620956076326 2.10045112633397 2.44149350584484 2.17914172976575 1.43872276123176 0.256873261710642 0.269445068548790 0.292752206011065 0.276047473012961 0.269718258448651 0.280120651029764 0.272546441721287 0.267358483421894 0.260717924411282 0.259848207114579 0.256873261710642 0.260441259380515 0.256873261710642 0.256873261710642 0.256873261710642 0.260231808660631 0.265993059019543 0.260054928052497 0.258392827289556 4 4 + 1465345 1465773 1465587 1464466 1466164 + gene protein_coding_gene FALSE TRUE AT4G03320.1 TIC20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV); protein translocase similar to TIC20, protein translocase [Arabidopsis thaliana] (TAIR:AT1G04940.1); similar to Tic20-like protein [Solanum tuberosum] (GB:ABB86268.1); contains InterPro domain Chloroplast protein import component Tic20; (InterPro:IPR005691) 2.23867455109131 13.7634363570522 3.17204792600259e-08 0.000493665818723784 11.8475525559039 5.93023965244121 2.23867455109131 0.232608698077534 AT2G38010_at 7.35473511209733 7.67415583906969 4.80740279382217 5.10948173292452 5.33369140546641 5.09398902371177 7.45215737705307 7.73426986182403 7.64875338769702 7.48445842760681 7.23586463926536 8.1740635884398 6.74726378476669 7.44207562635971 7.7047871917198 7.06883469333965 6.29034273598177 7.03008974031955 7.4341847106127 0.20506061635699 0.204256432037543 0.224254825678575 0.214377739189827 0.211277869457489 0.217519298845073 0.206719236984177 0.209651571218281 0.211811203321933 0.208594161259611 0.204256432037543 0.204256432037543 0.207137185852003 0.209678208088336 0.210706310338418 0.207123696962125 0.221634366592344 0.204256432037543 0.205653428824535 2 2 + 15916258 15916915 15916654.818 15913940 15917009 + gene protein_coding_gene FALSE TRUE AT2G38010.1|AT2G38010.2 ceramidase family protein Identical to Neutral ceramidase precursor (EC 3.5.1.23) (NCDase) (N-CDase) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase) [Arabidopsis Thaliana] (GB:Q304B9;GB:Q3EBK8;GB:Q7XJQ9); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT1G07380.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT5G58980.1); similar to Os01g0624000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043618.1); similar to Neutral/alkaline nonlysosomal ceramidase [Medicago truncatula] (GB:ABE89511.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase; (InterPro:IPR006823)|similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT1G07380.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT5G58980.1); similar to Os01g0624000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043618.1); similar to Neutral/alkaline nonlysosomal ceramidase [Medicago truncatula] (GB:ABE89511.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase; (InterPro:IPR006823) -1.38924428357231 -13.7537517579983 3.19520850595155e-08 0.00049723834769618 11.8443068305995 13.6870507725776 -1.38924428357231 0.0994614231087677 AT1G72680_at 8.26560495724169 8.63456705490375 9.06887709243825 9.07110717816159 8.24101995227132 7.925502869937 4.80773961527976 4.73718639666573 4.47748492139387 4.75808912802718 4.59828901469412 5.05873556080336 5.23075458167301 5.77889869947678 5.32946537511385 5.48858824337869 5.71665343203405 5.64033388916717 4.82042025802153 0.254718972119428 0.260101465485479 0.267672708489904 0.263050722576725 0.258854458036081 0.249267644306647 0.248411106608643 0.249725423108386 0.265507303786502 0.249587341801581 0.251065711340899 0.249699253262406 0.251160067778334 0.248411106608643 0.248411106608643 0.248411106608643 0.26569841015773 0.248411106608643 0.253189454303635 1 1 - 27363025 27363752 27363447.727 27362894 27364678 - gene protein_coding_gene FALSE TRUE AT1G72680.1 cinnamyl-alcohol dehydrogenase, putative similar to mannitol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT4G39330.1); similar to Alcohol dehydrogenase superfamily, zinc-containing; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding [Medicago truncatula] (GB:ABE84701.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 1.31761784045387 13.7254648505839 3.26391532571504e-08 0.000507897863834517 11.8348003744822 12.6142237822908 1.31761784045387 0.0848968134400498 AT1G75250_at 5.99944624848954 6.71811567929458 4.82760466122302 5.31888797763852 5.54012590362734 5.45450922820855 7.55073900408267 7.9443755057719 6.46629441882779 6.70126379328296 4.43842872903218 5.78174916400175 5.90152133021625 6.00681689951035 3.42362677937279 6.08836054499876 5.09933671969946 3.77501626431614 7.36154856797683 0.222383084840447 0.220934303922672 0.242624025934305 0.223198407504317 0.222644715875866 0.236033945145856 0.221580133217544 0.237857355714520 0.232748873774626 0.222327597613997 0.226296156215427 0.222362391217035 0.219623956752931 0.221938875811179 0.244373347995287 0.229889181071970 0.231769260218379 0.234994488286732 0.224901858045753 1 1 - 28248810 28249074 28248968.636 28248009 28249114 - gene protein_coding_gene FALSE TRUE AT1G75250.1|AT1G75250.2 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G19510.1); similar to MYB transcription factor MYB142 [Glycine max] (GB:ABH02867.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G19510.1); similar to Chain A, Crystal Structure Of The Myb Domain Of The Rad Transcription Factor From Antirrhinum Majus (GB:2CJJ); similar to MYB transcription factor MYB142 [Glycine max] (GB:ABH02867.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.77328285310219 -13.7237743050550 3.26807209257948e-08 0.000508512017605367 11.8342309846820 12.12292184967 -1.77328285310219 0.165999474622963 AT1G08840_at 3.04522518521854 3.07518544192334 2.34148229930260 2.17553450998371 2.45716705024787 2.51693971005879 3.7574742266464 3.98701541993223 4.04538747409648 3.66255969173616 3.10991238962333 3.13601400938657 2.94697119120737 2.49471200554045 2.45122110117 2.99089219050158 2.53167053845427 2.3790214192053 4.40342571800215 0.20811961233387 0.205765272902698 0.210200532473067 0.207638992757127 0.217169517990802 0.206913325369652 0.200529276135768 0.212000207791573 0.204523809206545 0.204916562014303 0.204709745000085 0.205054041324351 0.206804647010383 0.213381628602561 0.199460767234189 0.200398516896143 0.205314864334125 0.200299134228220 0.205639187313922 1 1 - 2829638 2830830 2830117.545 2829582 2838372 - gene protein_coding_gene FALSE TRUE AT1G08840.1 EMB2411 (EMBRYO DEFECTIVE 2411); ATP-dependent DNA helicase similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G03270.1); similar to OSJNBb0016D16.17 [Oryza sativa (japonica cultivar-group)] (GB:CAE04326.1); similar to hypothetical protein MG02491.4 [Magnaporthe grisea 70-15] (GB:XP_365789.1); similar to Os04g0588200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053694.1); contains InterPro domain UvrD/REP helicase; (InterPro:IPR000212) -1.18775830750369 -13.7163792714411 3.28632300162543e-08 0.000511318995822901 11.8317386233892 6.31559105553804 -1.18775830750369 0.0503640260077507 AT1G18570_at 6.27006612800484 6.55474326455813 7.68366059589724 7.70962983970341 8.04473357123262 6.95387978389258 2.7446569670186 2.61263014173476 4.13248565828481 2.76753104208986 3.62279877338529 4.76740771696626 3.9290054360779 4.32336431008703 3.81531529851741 4.10540854664509 4.90799284042495 4.12932093493372 3.04055319678205 0.27670955988882 0.271172473428735 0.281323673731487 0.275030779261311 0.2676810263466 0.287739217709621 0.272440344116986 0.2676810263466 0.287483017111089 0.273287127568504 0.269869829350078 0.269320163679369 0.273950534073301 0.28263805255368 0.271239506055824 0.2676810263466 0.276637236809652 0.278345504553834 0.268727991437383 1 1 + 6390461 6390948 6390702 6389404 6391260 + gene protein_coding_gene FALSE TRUE AT1G18570.1 MYB51 (myb domain protein 51); DNA binding / transcription factor putative transcription factor: R2R3-MYB transcription family similar to MYB122 (myb domain protein 122), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G74080.1); similar to MYB27 protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD29569.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.96950262771493 13.6698356421436 3.40376656630293e-08 0.00052955800238541 11.8159899962480 9.82855005209625 1.96950262771493 0.196484389149834 AT1G63720_at 3.8181076488315 4.392530275491 5.75154737159094 5.80656796656976 4.65101171832669 4.74387411153246 2.16268071872244 2.26116724441163 1.71561425405941 1.99773738335737 2.231491903174 2.07662399591275 2.86174975626545 2.46676297646930 2.30110660945757 2.61776017288968 3.32196361230402 2.74898416259889 1.88654553873850 0.256844830550588 0.253411907959991 0.257874184705117 0.257546946823596 0.245839202675842 0.253555185559751 0.244405637872270 0.263676312937786 0.248078010701265 0.245307885943885 0.244893198413232 0.249953422651056 0.250791862945826 0.246446518391986 0.245157478822833 0.243983025810364 0.255002585174956 0.243983025810364 0.245498936713219 1 1 - 23639807 23640340 23640068.909 23639519 23641192 - gene protein_coding_gene FALSE TRUE AT1G63720.1 similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to unknown [Thellun (GB:ABJ98061.1) 1.39565091336151 13.6633453930712 3.42050268618349e-08 0.000532127602889566 11.8137854150809 6.42090477727741 1.39565091336151 0.102572178049893 AT2G26440_at 10.3759637115066 10.6015037340936 10.5054099154004 10.6169962103947 9.23521663905188 9.16838649703796 4.24599152753509 4.40743675456161 7.91116333712835 4.77190698011121 6.3269403020297 6.43389165737315 4.80057722957695 6.96216381737444 4.6871405799358 5.09150131045886 5.34449416914832 7.15510719674746 5.15022626969329 0.225620148656231 0.226737853547101 0.226734094996967 0.225916573466178 0.226166490092479 0.226993550944623 0.227609453794879 0.226978664471391 0.229609340878003 0.232289747547679 0.227031065955020 0.225620148656231 0.236602847570948 0.234028330932299 0.225620148656231 0.225620148656231 0.235802929402467 0.235495764458927 0.228323051418762 2 2 + 11255898 11256451 11256122 11254461 11256571 + gene protein_coding_gene FALSE TRUE AT2G26440.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT1G02810.1); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); similar to Os06g0193200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057041.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 1.18978661036666 13.6484096188568 3.45935769174301e-08 0.000538137682527542 11.8087041368900 14.5419427379352 1.18978661036666 0.0530153837404552 AT2G25930_at 7.77401207166308 7.7106722682023 7.0982537168041 7.2386152226246 7.88640704265772 7.79465753518534 3.90323270324526 4.3346428383567 4.42678838359529 4.37415193167973 5.07865193012707 5.41893124907791 5.07437011151631 5.25042017898815 5.46888429419165 5.08949642990724 5.89550026390716 5.15943130331364 4.10174193088638 0.222214782923037 0.225731944498961 0.221069051773163 0.218536474775442 0.219426636544551 0.224467569558137 0.220413884445599 0.225581479610464 0.223320380405778 0.219818380404382 0.218536474775442 0.218536474775442 0.219435567797312 0.218536474775442 0.222090494708001 0.218536474775442 0.222054990932302 0.222527657608761 0.22490270766505 2 2 + 11069702 11070229 11069948.545 11066113 11070402 + gene protein_coding_gene FALSE TRUE AT2G25930.1 ELF3 (EARLY FLOWERING 3) Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway Elf3 controls rhythmic circadian outputs under constant light conditions. Identical to Protein EARLY FLOWERING 3 (Nematode-responsive protein) (ELF3) [Arabidopsis Thaliana] (GB:O82804;GB:O04419;GB:Q8L7A2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G21320.1); similar to early flowering 3 [Mesembryanthemum crystallinum] (GB:AAQ73529.1) 1.28870502351297 13.6077572649958 3.56756483449741e-08 0.000554934710006072 11.7948174741774 11.5202390759336 1.28870502351297 0.0808456048121018 AT2G34640_at 6.69743337220223 6.68668166530552 5.367732796093 5.77565812598059 6.02990761918353 5.89943787923564 6.86075468871911 6.92157940241727 6.19093395872758 6.93531343898762 4.92652323222206 5.83770021514083 5.27593974401508 5.10647440740264 5.27301347517845 5.53154110147385 4.98418064647845 5.08903233742341 7.1461791787173 0.20396743416408 0.207057197393453 0.227632337389309 0.210823055650070 0.209738023238833 0.201288127873984 0.211697095804796 0.201288127873984 0.215149870911085 0.207296799482204 0.208101682504490 0.201847118837984 0.209427859131546 0.218270823811712 0.214556849485245 0.205695502016857 0.224157086872751 0.216607988206236 0.201730533105034 2 2|0 -|/ 14589159 14589893 14589478.222 14588965 14591778 - gene protein_coding_gene FALSE TRUE AT2G34640.1 PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. similar to hypothetical protein MtrDRAFT_AC144478g3v1 [Medicago truncatula] (GB:ABE93314.1) -1.26392652879925 -13.6075703384859 3.56807080775984e-08 0.000554977733438965 11.7947534298177 12.2851612788393 -1.26392652879925 0.0748830292238073 AT1G23090_at 5.78199463566354 6.57775694959863 4.27846735910313 4.36951547630534 3.27333977893682 2.92915738051154 4.7628517612157 5.16015522502731 6.13417187790816 5.30330181505361 4.15105618379127 4.01165276857616 3.06103013917276 3.91432062940787 3.24166440970188 4.20737153484428 3.33868094471773 4.06812847131106 4.77167207927434 0.264426639916187 0.245754618681373 0.245903339045436 0.252328364527223 0.249761267647565 0.251330688794263 0.251084947217305 0.257119157649534 0.275187810631033 0.258071264109906 0.245754618681373 0.245754618681373 0.254492667634895 0.250918628868277 0.256658813660898 0.245754618681373 0.251627745271569 0.247767739329419 0.245754618681373 1 1 - 8185230 8186248 8185866.727 8184941 8189053 - gene protein_coding_gene FALSE TRUE AT1G23090.1 AST91 (SULFATE TRANSPORTER 91); sulfate transporter Encodes AST91 mRNA for sulfate transporter. Identical to Probable sulfate transporter 3.3 (AST91) (SULTR3;3) [Arabidopsis Thaliana] (GB:Q9SXS2;GB:O49307); similar to SULTR3,4 (SULTR3,4), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G15990.1); similar to SULTR3,2 (SULFATE TRANSPORTER 3,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT4G02700.1); similar to SULTR3,1 (SULFATE TRANSPORTER 1), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G51895.1); similar to plasma membrane sulphate transporter [Brassica oleracea var. acephala] (GB:CAG28416.1); similar to sulphate transporter protein [Sporobolus stapfianus] (GB:CAA65536.1); similar to Sulphate transporter [Medicago truncatula] (GB:ABE80289.1); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) -1.75594004985854 -13.5998087612697 3.58914888530316e-08 0.0005582203261312 11.7920926261465 9.21779818376313 -1.75594004985854 0.165793140558345 AT1G78180_at 5.14040530220439 4.99012041016207 3.84600549673503 3.80898103194792 4.20969261424239 4.20485327526819 6.23241815937531 5.97512817294228 6.0416775674614 6.38982917314596 5.39140043999323 5.97528020158905 5.60331172364358 5.55623157011741 5.93113003825712 5.5985702767762 4.34638396553416 5.54588898946976 6.43751004649951 0.266054132943493 0.252123405637866 0.274150340941746 0.281418587630415 0.252673218465977 0.271821793570329 0.251491124153907 0.261528351842278 0.258882658111694 0.251722823804819 0.252057204935837 0.253602775558789 0.257923915849963 0.260565064552083 0.251491124153907 0.255668782179995 0.275998520167244 0.256412113591189 0.255802577172781 1 1|0 +|/ 29422602 29423231 29422991.8 29421806 29423533 + gene protein_coding_gene FALSE TRUE AT1G78180.1 binding similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G64970.1); similar to 80C09_21 [Brassica rapa subsp. pekinensis] (GB:AAZ41832.1); similar to Os03g0191100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049231.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -1.18164125915951 -13.5911770625735 3.61274902730133e-08 0.000561854728725903 11.7891299739838 10.6925490143805 -1.18164125915951 0.0519676891560299 AT2G26560_at 11.0109154121175 11.2969866790766 11.5121079061466 11.5637705193366 11.5127340574651 11.1015657588416 6.7207779677928 6.39998420925551 8.6089078747703 5.70229659547924 7.10526247334194 7.43548488820523 7.76011130361563 8.07308760725352 5.02286936517458 6.3912204605239 7.73893970771178 5.95658633678516 5.84295074179208 0.276983771554246 0.278621959382387 0.280652229959949 0.277496838160608 0.283303976195194 0.279771268685436 0.271050649385956 0.262465516760043 0.280096119290647 0.26657414271236 0.268520185612744 0.266568129062156 0.264288542371498 0.263455828413691 0.277729338809872 0.262623935926293 0.275217551979814 0.272097294009378 0.275481161490215 2 0|2 /|- 11301003 11301617 11301348.556 11300847 11302884 - gene protein_coding_gene FALSE TRUE AT2G26560.1 PLP2 (PHOSPHOLIPASE A 2A); nutrient reservoir encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. similar to PLA IVA/PLP1, nutrient reservoir [Arabidopsis thaliana] (TAIR:AT4G37070.2); similar to patatin-like protein [Gossypium hirsutum] (GB:AAX99411.1); contains InterPro domain Patatin; (InterPro:IPR002641) 1.39138601193306 13.5846457781320 3.63071847090006e-08 0.000564613029409669 11.7868857536942 16.9666038163409 1.39138601193306 0.103323025879671 AT3G09580_at 7.63307229843207 7.78527251779125 5.91071988385082 6.08495543876081 7.35725132455923 6.90723268536692 8.2247404360773 8.31055249636904 9.28639770855893 8.41604134837697 7.62937316135614 7.68393627801742 7.29284569577578 7.37101768045684 8.19740777754558 7.89062621619534 7.26450086767239 7.37688156170824 8.70688565040284 0.169179555435093 0.174758340204222 0.195473895217381 0.196779466595914 0.182999237407027 0.188837516112529 0.169028118685173 0.182978453751118 0.189182890612129 0.170763913018595 0.17135039256516 0.173901644725749 0.169028118685173 0.178070276056225 0.169028118685173 0.174907406155986 0.186849811848686 0.172570376376212 0.174917255567095 3 3 - 2942692 2943183 2942897.727 2942509 2944083 - gene protein_coding_gene FALSE TRUE AT3G09580.1 amine oxidase family protein similar to HEMG2/MEE61 (maternal effect embryo arrest 61), oxidoreductase/ protoporphyrinogen oxidase [Arabidopsis thaliana] (TAIR:AT5G14220.1); similar to putative oxidoreductase, FAD-binding [Oryza sativa (japonica cultivar-group)] (GB:BAC07074.1); contains InterPro domain Flavin-containing amine oxidase; (InterPro:IPR001613); contains InterPro domain Amine oxidase; (InterPro:IPR002937) -1.31907709248579 -13.5577744122462 3.70567808588771e-08 0.000576232942355539 11.7776298197862 15.4724405804612 -1.31907709248579 0.0888165732970663 AT1G29050_at 5.92757580721587 5.9366109916182 9.26593672961754 9.18926554409732 8.74391370478854 8.4067023638059 7.96911866300396 8.13259378816684 6.60744167382379 6.82683644019474 7.11544412350675 5.86615594863676 7.7517479747389 7.51744897433986 5.21739722976563 8.01019797887909 8.70716726386871 7.45708468160332 6.56650556943238 0.251823175180365 0.234005796386754 0.246609579340003 0.243352627458189 0.252490652011320 0.254684442498026 0.239314434597909 0.246816211552531 0.247503734437601 0.233560561835115 0.234177348416607 0.240420091659858 0.230326207601714 0.239142779480847 0.255083093154516 0.236006942866591 0.233126720297573 0.232690783408062 0.23102195467356 1 1 - 10136363 10136992 10136625.182 10136216 10139194 - gene protein_coding_gene FALSE TRUE AT1G29050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G34070.1); similar to unknown [Pisum sativum] (GB:ABA29158.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 1.22419120025492 13.5372812244398 3.76397581696079e-08 0.000585260599779232 11.7705463096922 14.8825939072398 1.22419120025492 0.0662136430944607 AT3G27880_at 4.83415196994432 5.52295846583576 6.14566371675246 6.32318012890191 7.1555425128991 6.6492815316509 4.28867222075922 4.37615912435701 3.46825975437633 3.26948674454181 4.48699766461218 4.71267071326745 5.09056501698694 5.09112559372439 4.99768843051392 4.91509636159035 4.72951010252827 4.41757258553693 3.17036149688187 0.224208354653427 0.224846913224416 0.219276424672778 0.229169921825746 0.223796475234160 0.234915543528588 0.221368085871456 0.226273696232666 0.233367309916375 0.226843589202229 0.219276424672778 0.226499721843578 0.219276424672778 0.219748768376108 0.220830982445884 0.219276424672778 0.231869895824537 0.225676722869582 0.224343078538746 3 3 + 10339816 10340364 10340033.909 10339449 10340673 + gene protein_coding_gene FALSE TRUE AT3G27880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23710.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84838.1); contains InterPro domain Protein of unknown function DUF1645; (InterPro:IPR012442) 1.6576910853277 13.5159713775628 3.82565567836077e-08 0.000594812944871532 11.7631578875429 9.71587919581845 1.6576910853277 0.151847022073222 AT4G35630_at 8.82244340162714 9.02763400058772 10.0352206683302 10.1756958120973 8.57663668801221 7.8451089806665 6.75300536918398 7.14058776555928 5.64886317402033 6.32943857359186 8.09827902934435 8.73117919389627 7.13924038242599 7.98034506149699 8.45598958690854 8.1919402371191 7.27677272360561 8.13401621971525 5.84625536371704 0.206389850828883 0.204191555148868 0.217705821912822 0.216575656487291 0.206301290770521 0.211092928365343 0.208439331338789 0.199597431548111 0.233688848570850 0.212898636856924 0.203622216718277 0.198499317415545 0.207201512520186 0.198499317415545 0.202297928695514 0.198499317415545 0.224575271046390 0.208986925759689 0.214411632560696 4 4 + 16904926 16905431 16905137 16904064 16905727 + gene protein_coding_gene FALSE TRUE AT4G35630.1 PSAT (phosphoserine aminotransferase); phosphoserine transaminase Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. Identical to Phosphoserine aminotransferase, chloroplast precursor (EC 2.6.1.52) (PSAT) [Arabidopsis Thaliana] (GB:Q96255); similar to phosphoserine aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT2G17630.1); similar to phosphoserine aminotransferase [Medicago truncatula] (GB:ABE77665.1); contains InterPro domain Phosphoserine aminotransferase; (InterPro:IPR003248); contains InterPro domain Aminotransferase, class V; (InterPro:IPR000192) 1.64084958512065 13.4913498322032 3.8982922757889e-08 0.0006060675001169 11.7545924090616 15.5182862564699 1.64084958512065 0.149588650450091 AT4G24700_at 5.9330520124483 6.32641343346508 5.64877417772423 5.78887434824707 6.02074409589892 6.11780964053144 8.91577078530335 8.85836934496528 8.01637606491716 8.46956338765344 7.65286571722556 7.59092644106587 7.5392116939358 7.4670373231708 6.85478799854862 8.59246258234113 7.56722717259657 6.98522850520557 8.76973814014589 0.241510215942305 0.243372897684491 0.257229846137819 0.266266195388260 0.247700328570994 0.268543399631584 0.244951324657737 0.24661517291571 0.259199112579001 0.247347668231162 0.242722897929396 0.238454592409263 0.24399630431051 0.240535932809834 0.261230814951118 0.238454592409263 0.261288401059941 0.249535376774562 0.254734858418837 4 4 - 12744826 12745154 12744975.182 12744632 12745323 - gene protein_coding_gene FALSE TRUE AT4G24700.1 similar to Os02g0595200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047311.1) -1.25084579837800 -13.4681404713609 3.96813690877903e-08 0.000616886563838788 11.7464897797702 14.6761147932397 -1.25084579837800 0.0748504754680812 AT1G65480_at 7.70938337707333 8.10802210622357 9.67247431672818 9.83477740982257 10.3584672626662 10.1419384055546 8.8741440268791 8.96493324304815 3.80204428113001 4.1967434613545 2.88032551664155 1.88650346749406 6.02353014550737 4.83759526664914 2.74560980878218 7.73383234668855 8.36680005297779 4.4441686297022 3.63035033111424 0.249545983970566 0.251823797275113 0.257741261704067 0.259953688155218 0.257243422810671 0.256948984500305 0.254686928615946 0.256560853199957 0.267832321115857 0.257514539591934 0.25189224891139 0.254221940480555 0.258402844641587 0.256071089154288 0.251590636629381 0.249545983970566 0.252298928872004 0.252395040017901 0.254719262925907 1 1 + 24335218 24337244 24336475.909 24335091 24337597 + gene protein_coding_gene FALSE TRUE AT1G65480.1 FT (FLOWERING LOCUS T) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. FT is a target of CO and acts upstream of SOC1. Identical to Protein FLOWERING LOCUS T (FT) [Arabidopsis Thaliana] (GB:Q9SXZ2;GB:O04467); similar to TSF (TWIN SISTER OF FT), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT4G20370.1); similar to flowering locus T-like protein [Vitis vinifera] (GB:ABF56526.1); contains InterPro domain Phosphatidylethanolamine-binding protein; (InterPro:IPR001858); contains InterPro domain PEBP; (InterPro:IPR008914) 1.28810497841298 13.4203115551096 4.11639804873479e-08 0.000639894076675824 11.7297047056368 13.5786050245853 1.28810497841298 0.0848466665186775 AT4G34250_at 4.25766926485441 4.80938394124717 1.13874816025489 1.15073544023271 1.64473728298482 2.25157276297596 3.44795516678368 3.72232502189651 2.42919589000331 2.29126682433521 1.79492554676304 2.09425199775678 1.82368760836201 1.97494255842435 2.38417079168947 1.80813800406332 1.669005959691 1.79437459645437 3.28963305448059 0.254976426347076 0.245612159624374 0.229066429908154 0.233824257803113 0.230033005045916 0.233146079319619 0.242816599560176 0.240639746071663 0.232307339653651 0.230006183268505 0.238893174803531 0.224124675570919 0.227813779983557 0.224333758802695 0.227009559351923 0.224124675570919 0.231053312380152 0.229307401781760 0.224916546772725 4 4 + 16395651 16396158 16395886.182 16394712 16396497 + gene protein_coding_gene FALSE TRUE AT4G34250.1 fatty acid elongase, putative Identical to 3-ketoacyl-CoA synthase 16 precursor (EC 2.3.1.-) (KCS-16) (Very-long- chain fatty acid condensing enzyme 16) (VLCFA condensing enzyme 16) (KCS16) [Arabidopsis Thaliana] (GB:Q9SYZ0); similar to FAE1 (FATTY ACID ELONGATION1), acyltransferase [Arabidopsis thaliana] (TAIR:AT4G34520.1); similar to fatty acid elongase, putative [Arabidopsis thaliana] (TAIR:AT2G15090.1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT1G19440.1); similar to beta-ketoacyl-CoA synthase [Brassica napus] (GB:AAK64213.1); similar to beta-ketoacyl-CoA synthase [Isatis tinctoria] (GB:AAX58615.1); similar to 3-ketoacyl-CoA synthase [Physaria fendleri] (GB:AAU05611.1); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) -1.63248986356125 -13.4182635117248 4.12287962033649e-08 0.000640860408185104 11.7289833235067 5.09687540807389 -1.63248986356125 0.149675867730788 AT4G01460_at 6.28407101795878 7.18591150954952 2.9117373398041 3.53043621391894 5.23547733340778 4.81262203363804 6.95703842857777 7.25381220635393 7.05678544861389 6.84192995182385 6.39743040128207 7.88241578881578 5.87725126286501 5.61452103847437 6.89118007847945 6.15968672028656 4.13028616531399 5.55169798586592 8.020017978397 0.233037793280101 0.233668707385727 0.24962160084609 0.237866449427939 0.230199140747491 0.235580878042269 0.230199140747491 0.235367747530316 0.247157993682158 0.234891046827324 0.233744117083102 0.23622965202657 0.230199140747491 0.236393923552344 0.232336176310746 0.230199140747491 0.246737160683458 0.237499035886972 0.230199140747491 4 4|0 +|/ 621717 622632 622147.7 620759 622943 + gene protein_coding_gene FALSE TRUE AT4G01460.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G61950.1); similar to Os10g0376900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064473.1); similar to helix-loop-helix DNA-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19748.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -2.02041291992824 -13.4181449732027 4.12325510607114e-08 0.000640877541136637 11.7289415640321 12.2060398302933 -2.02041291992824 0.209316454883625 AT2G33830_at 12.0013466028687 11.9134902581965 11.4611359191388 11.4526760905527 12.6100362439539 12.2294165083931 7.9366984995076 7.32307384660202 8.88233249585757 7.20678424233912 8.95585735443389 8.08958336587907 9.03154473795137 8.98346793387506 8.54244811014069 7.9013942004621 9.52469658775069 8.81640110580477 7.58169221578574 0.193588714810454 0.191560724688876 0.196264144802070 0.191185193430341 0.191910675490639 0.200421479771138 0.183708951983851 0.188088590226857 0.188440153072655 0.192763346397617 0.189713858898983 0.187244736921371 0.184646235807625 0.187096325708905 0.183708951983851 0.18990777158409 0.188107240870372 0.190651155894684 0.1865854889774 2 2|0 -|/ 14317000 14317334 14317127.25 14316560 14317427 - gene protein_coding_gene FALSE TRUE AT2G33830.1|AT2G33830.2 dormancy/auxin associated family protein similar to DRM1 (DORMANCY-ASSOCIATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G28330.1); similar to auxin-repressed protein [Brassica oleracea] (GB:AAL67436.1); contains InterPro domain Dormancyauxin associated; (InterPro:IPR008406) 1.49253420596283 13.4076305401661 4.1567092217668e-08 0.000646035747246996 11.7252345730688 19.176456159084 1.49253420596283 0.125890209205427 AT1G02220_at 2.53689428771534 2.75822222758568 5.08785964957711 4.88979828171708 3.26692935785788 3.38522213902612 2.33543692776340 2.48048121493681 3.79227319352457 3.48063986020004 4.73950633442725 3.83605710029304 3.4291232017781 4.56277990197323 3.70676939422794 4.2555451538789 4.16099176328297 4.71325352909493 2.98669670694207 0.229851403784225 0.221615071524842 0.227163266570199 0.22415345974907 0.224372703438124 0.232228492154414 0.223178967037759 0.223670666625739 0.223820812163543 0.218146700881434 0.224838066830683 0.224369559180381 0.223423741535714 0.220097818055569 0.222240307191986 0.218738917030489 0.225334807832536 0.222546219496157 0.217479131440589 1 1 - 428913 429716 429408.364 428814 430647 - gene protein_coding_gene FALSE TRUE AT1G02220.1 ANAC003 (Arabidopsis NAC domain containing protein 3); transcription factor similar to ANAC048 (Arabidopsis NAC domain containing protein 48), transcription factor [Arabidopsis thaliana] (TAIR:AT3G04420.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); similar to Os08g0157900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061034.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.19266353484578 13.3990911491482 4.1840963899484e-08 0.000650250419961881 11.7222196785458 7.14029211956831 1.19266353484578 0.0607531288165878 AT3G13610_at 2.56067421365475 2.89228160039037 7.89615818414323 7.77362810364372 1.54785429021492 1.69806157433657 0.785962238686768 1.11308278333295 0.583477304356924 1.30611281231773 0.738553598580965 0.585965713122172 1.01499970522608 0.376556706655678 0.821984213839663 0.973855112003145 0.398912670024127 0.460592997597896 1.04139619560716 0.251023355211271 0.258011021047944 0.27996029342481 0.282144687631060 0.252146744237255 0.248774477479671 0.248426879511112 0.256896342864703 0.248852656719534 0.254728739419168 0.248426879511112 0.248787471879662 0.268029150933823 0.248426879511112 0.248463987581693 0.250274205795336 0.248426879511112 0.250611498522585 0.248426879511112 3 3 + 4449941 4450598 4450320.818 4449381 4450818 + gene protein_coding_gene FALSE TRUE AT3G13610.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G55290.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE88764.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.29267874063617 13.3554048937883 4.32730757728449e-08 0.000672463597510009 11.7067364123897 4.10767438707965 1.29267874063617 0.0873106928756414 AT3G63200_at 4.28743540484176 4.1602632810201 2.05165491982949 2.08373848313411 2.36973663829269 2.49122013785217 6.89932401363372 7.18757641861816 5.29822494489544 6.48593517800987 7.41787990673905 8.42194517386584 6.98927879308979 7.14768731262792 7.71510623357394 5.6797804935832 5.24251923556541 6.42218164132294 5.78673510498404 0.256717100338033 0.262265702252463 0.273167386309865 0.273483757011729 0.276018612517669 0.276035390045143 0.257566358910707 0.266306164230428 0.261452821259526 0.256717100338033 0.264029760307559 0.268009027592551 0.258134190742221 0.256717100338033 0.266015705992590 0.256717100338033 0.256717100338033 0.256717100338033 0.256717100338033 3 3 + 23357678 23358313 23357986.182 23356877 23358539 + gene protein_coding_gene FALSE TRUE AT3G63200.1 PLA IIIB/PLP9 (Patatin-like protein 9); nutrient reservoir similar to PLA IIB/PLP6 (Patatin-like protein 6), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT2G39220.1); similar to putative lipid acyl hydrolase [Oryza sativa] (GB:AAK72885.1); similar to Os03g0254400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049586.1); contains InterPro domain Patatin; (InterPro:IPR002641) -1.18098998095921 -13.3441427204321 4.36508471344206e-08 0.000678290513621762 11.7027286744208 10.3096248745323 -1.18098998095921 0.0586983955140735 AT2G28400_at 4.76102046641694 5.5224115134528 7.10090247739502 7.42870454700471 7.5720227077904 7.09029020886019 4.21055362714463 4.33677603768535 4.06604833895181 3.65254559990902 4.98052668227642 3.24407286045370 5.28161819402218 4.47163979628374 3.94800575681313 4.66604020120967 5.99132231228318 4.04684427432045 3.39335046499733 0.231976337720623 0.231976337720623 0.243765426417024 0.240136186737527 0.240314790422665 0.237364500224021 0.238126823502584 0.231976337720623 0.244003277850241 0.240114977049932 0.237327988018561 0.23689266696101 0.238264126425102 0.242770406859970 0.234583438252909 0.237612049652711 0.246437905337419 0.237447481764343 0.236632985372277 2 2 - 12155680 12156048 12155861.909 12155381 12156129 - gene protein_coding_gene FALSE TRUE AT2G28400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60680.1); similar to Protein of unknown function DUF584 [Medicago truncatula] (GB:ABE80969.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 1.73253343292137 13.3423930987657 4.37098563336239e-08 0.000679163747711849 11.7021054589598 10.1442053120490 1.73253343292137 0.16735100213155 AT4G33700_at 7.03468139877502 7.58541818570833 7.29613258086319 7.22221229293581 7.5519299711065 7.86190411341196 5.06799662434503 4.68894505712565 4.00241085184724 4.88009465233026 6.00557803857824 5.53458792775588 5.81670604691965 6.00067982763333 6.3061875830689 5.98990922030545 6.28219032897936 5.90832569970647 4.23992210709982 0.213927281126841 0.198892833440627 0.211926801765153 0.201265890189783 0.201517481835884 0.201930882561675 0.201136551551133 0.213177316676799 0.226351655012545 0.207790031857040 0.201357773275124 0.204868831579479 0.205883066267764 0.210830427259577 0.218064631974364 0.198892833440627 0.204745415275960 0.198914640540778 0.202107135517290 4 4|0 -|/ 16176550 16177445 16176946.8 16176279 16179484 - gene protein_coding_gene FALSE TRUE AT4G33700.1 CBS domain-containing protein similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G14520.1); similar to CBS [Medicago truncatula] (GB:ABE86592.1); contains InterPro domain Protein of unknown function DUF21; (InterPro:IPR002550); contains InterPro domain CBS; (InterPro:IPR000644) 1.49758123505842 13.3388510726804 4.38295832418385e-08 0.000680980234828445 11.7008432959555 11.9659840886394 1.49758123505842 0.128170232717050 AT1G69200_at 4.5882929874556 4.89696458273027 3.85743006790266 3.60275614010691 3.78136751743526 3.56603053729184 5.18392738340164 5.34160621081023 3.99353010681285 4.12426579254159 2.80014897234784 2.90710117420044 2.70796241092728 2.21130466812602 3.60423308621889 3.65245278858876 3.77982954977083 2.90682001808611 4.82536472393385 0.224249878480142 0.223549663306461 0.223203251600743 0.227704620093461 0.216534390217512 0.221609006416615 0.230732062228437 0.221877714507764 0.223504215239719 0.225353004527077 0.232269481871859 0.227629851342361 0.219806614648243 0.230761097188333 0.216534390217512 0.216534390217512 0.220848947428427 0.222162968201921 0.216534390217512 1 1|0 +|/ 26021346 26021906 26021578.8 26019687 26022156 + gene protein_coding_gene FALSE TRUE AT1G69200.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54090.1); similar to putative kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT81682.1); contains InterPro domain PfkB; (InterPro:IPR011611) -1.27197850815571 -13.3242454137344 4.43270594464254e-08 0.000688665195559665 11.6956317480282 8.04510615737315 -1.27197850815571 0.0832408386925125 AT1G15310_at 4.51152788032478 4.42060497449965 6.06038401793977 5.82463091637743 5.55917323619044 5.58288643596911 4.54151667504 4.51273978905772 4.42935126220812 4.24729336724256 5.41194632150505 5.01087845580557 5.39807601544542 5.36690525314836 5.10183001109273 5.49326282881624 6.14236955354662 5.47658651688828 4.5709444274685 0.217037824473143 0.217037824473143 0.221753694070562 0.232231714947815 0.224652590015327 0.231804956641011 0.22201531588069 0.222540511102355 0.226249945798504 0.226263349024006 0.229425486444246 0.228684108321854 0.217037824473143 0.226841063543106 0.224225537760827 0.217037824473143 0.219923502922272 0.219745761045176 0.221594785057101 1 1|0 -|/ 5269192 5269839 5269415.125 5269014 5272053 - gene protein_coding_gene FALSE TRUE AT1G15310.1 ATHSRP54A (Arabidopsis thaliana signal recognition particle 54kDa A); 7S RNA binding / GTP binding / mRNA binding 54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins Identical to Signal recognition particle 54 kDa protein 1 (SRP54) (SRP-54A) [Arabidopsis Thaliana] (GB:P37106); similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.1); similar to signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B) [Arabidopsis thaliana] (TAIR:AT5G49500.1); similar to Signal recognition particle 54 kDa protein 2 (SRP54) (GB:P49966); similar to signal recognition particle 54 kDa subunit (GB:AAA66200.1); similar to Signal recognition particle 54 kDa protein 2 (SRP54) (GB:P49972); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897); contains InterPro domain Signal peptide binding (SRP54) M-domain; (InterPro:IPR004125); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Signal recognition particle protein SRP54; (InterPro:IPR006325) 1.13477008622331 13.2957877992251 4.53140578318605e-08 0.000703953888417953 11.6854452354338 10.0472304349269 1.13477008622331 0.0442007916763998 AT2G16700_at 7.60276299097327 7.53959378094226 8.52622385704962 8.16189745166138 8.60725898068537 8.18268698792091 6.42355661772315 6.27515059919654 6.09071376349634 5.97747001721488 7.32923600083083 7.05527956993557 6.59543364811042 6.88553726838717 7.13216530071364 6.91258093775159 6.80262342250607 7.56104981680518 5.16811002993138 0.205827045521646 0.205827045521646 0.215374339278179 0.206304476723753 0.208570821597025 0.214271105386161 0.215449732237261 0.218608452945034 0.224637806735962 0.21793064802505 0.207876589379469 0.211457909019321 0.208848344996900 0.212631641371012 0.207045769995271 0.205827045521646 0.212707869672041 0.206344541448983 0.226013619940989 2 0|2 /|+ 7252010 7252523 7252170.875 7251690 7252823 + gene protein_coding_gene FALSE TRUE AT2G16700.1 ADF5 (ACTIN DEPOLYMERIZING FACTOR 5); actin binding Encodes actin depolymerizing factor 5 (ADF5). Identical to Actin-depolymerizing factor 5 (ADF-5) (AtADF5) (ADF5) [Arabidopsis Thaliana] (GB:Q9ZNT3;GB:Q9SLE7); similar to actin binding [Arabidopsis thaliana] (TAIR:AT4G34970.1); similar to Os03g0243100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049525.1); similar to actin depolymerizing factor [Elaeis guineensis] (GB:AAF60173.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) 1.34902889876819 13.2934766008139 4.53952596794336e-08 0.000705169963860321 11.6846160507695 14.0547261661912 1.34902889876819 0.100760296265398 AT1G06180_at 1.54751585269228 1.94398738798785 3.62860483106691 3.69751708240974 2.43943204727939 2.63260818936367 0.931257321742603 1.02409192616096 1.18512538377892 1.09226315618408 1.37858103227726 2.02230140759352 2.26811727968431 1.46466126281088 1.90903522845698 1.90074442478773 2.79660304483931 2.09628514789993 1.37286565869875 0.225962708763853 0.225223731588177 0.224283232670186 0.227243411282912 0.220352939509538 0.225409222604826 0.225405233222972 0.223703595342665 0.224036949441563 0.224961484146368 0.220352939509538 0.220352939509538 0.220352939509538 0.225164316289007 0.223161881859676 0.222714186956357 0.240431341061780 0.222913885874601 0.220352939509538 1 1 + 1889816 1891064 1890652.636 1889407 1891157 + gene protein_coding_gene FALSE TRUE AT1G06180.1 ATMYB13 (myb domain protein 13); DNA binding / transcription factor member of MYB3R- and R2R3- type MYB- encoding genes similar to AtMYB14/Myb14at (myb domain protein 14), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G31180.1); similar to transcription factor MYB39 [Zea mays] (GB:CAJ42203.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.25030855968691 13.2871743534174 4.56174880063751e-08 0.000708576441203024 11.6823535643545 3.82877308138675 1.25030855968691 0.0789011350128886 AT1G30520_at 6.97454186341517 6.82429103025578 5.60954972760206 5.35340962993066 6.06513851637159 6.20211146988274 7.66138866725985 7.49767011941188 8.93739258697582 8.37312353575444 7.82343945158165 8.35843781780372 6.75597244558503 7.47502388398534 8.63260604134265 7.49752350835749 6.70358703703156 7.33497412204452 8.25257011656563 0.185296866282138 0.175205771857561 0.181917696920716 0.179170897918513 0.190182514181673 0.180047642216647 0.176776513191471 0.180935892893938 0.174860171278863 0.180090958589540 0.176527412765218 0.177981884958662 0.181295350181043 0.183704074361755 0.174946089429104 0.174860171278863 0.177643957824459 0.174860171278863 0.179802550534196 1 1 + 10812769 10813503 10813094.545 10810966 10813613 + gene protein_coding_gene FALSE TRUE AT1G30520.1 acyl-activating enzyme 14 (AAE14) similar to 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein [Arabidopsis thaliana] (TAIR:AT4G19010.1); similar to Acyl-CoA synthetase (ISS) [Ostreococcus tauri] (GB:CAL50517.1); similar to Os08g0130400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060922.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) -1.19012689605219 -13.2740812272598 4.60829635773377e-08 0.00071576059028321 11.6776464293909 14.5703747704654 -1.19012689605219 0.0632889121315438 AT2G47270_at 3.75057390538703 4.04751737701813 5.14090186782457 5.56157939613494 7.7500595243437 7.37558146081181 2.91838287760058 3.50685103779105 3.58530382291612 2.43880846848334 3.07536940574016 2.25360058197058 3.30767217410491 3.21307618578644 2.50621587235216 4.06818394290758 4.13685578811338 3.49543357076062 2.76621042251177 0.259603380924756 0.260082957579328 0.264336747564877 0.272422321444819 0.274219233965975 0.282162256043942 0.258840187446227 0.258840187446227 0.275297152141864 0.268713130971634 0.265512276961506 0.261032184323743 0.258840187446227 0.260986302548414 0.266981584637125 0.26016030759854 0.26532497273883 0.262040620409041 0.258840187446227 2 2 - 19418816 19419036 19418924.455 19418630 19419221 - gene protein_coding_gene FALSE TRUE AT2G47270.1 transcription factor/ transcription regulator contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 1.6140713158714 13.2490835194785 4.69860600961679e-08 0.000729740499353584 11.6686340982396 8.10001018662433 1.6140713158714 0.150036856961754 AT2G47890_at 8.63119663327982 8.881260302629 8.32904487269747 8.54847873831764 9.31522977780294 8.88572256918025 7.37066970382399 7.07502334269534 4.59233764217465 5.61050291738464 6.71823517786039 6.6180659299438 7.49349533712656 7.67281561362437 6.36042188531721 6.49791148604904 7.48581414526072 6.57514635301636 4.67317059207494 0.269368015647345 0.267280965256714 0.266271139073538 0.268967452510038 0.271858484634473 0.280718607534141 0.270555002837208 0.27421839060282 0.297242108124965 0.273290543611364 0.266271139073538 0.266271139073538 0.270959810746822 0.266271139073538 0.266271139073538 0.266271139073538 0.274268029224852 0.27198239362179 0.281625240322142 2 2 + 19615733 19616518 19616027.636 19615066 19616715 + gene protein_coding_gene FALSE TRUE AT2G47890.1|AT2G47890.2 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 13 (COL13) [Arabidopsis Thaliana] (GB:O82256;GB:Q7GAB9); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT3G21880.1); similar to Os03g0351100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050114.1); similar to putative zinc-finger protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20080.1); similar to Os07g0667300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060574.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315)|Identical to Zinc finger protein CONSTANS-LIKE 13 (COL13) [Arabidopsis Thaliana] (GB:O82256;GB:Q7GAB9); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT1G28050.1); similar to Os03g0351100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050114.1); similar to putative zinc-finger protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20080.1); similar to Os07g0667300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060574.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 1.37457467551964 13.2404575224849 4.7302141705781e-08 0.000734602260690778 11.6655164542897 14.3227825550047 1.37457467551964 0.107037670330475 AT2G34300_at 4.84106252038342 5.04613380381078 3.26015586756993 3.04946823695079 3.07304498841879 3.5825521550806 6.17677118424607 6.1271930616474 6.82242045623105 6.64398048104042 6.8860866931033 7.07534473402876 5.7579946978046 6.74646411159523 6.80163587262465 6.07910806791891 4.69085594867052 6.62106355313894 6.70814552684281 0.220885267766233 0.215536481034511 0.218726381312407 0.223249817084215 0.223467338202191 0.218670967087 0.217638663973983 0.215049456199505 0.228544933727570 0.212021931314603 0.212054249644197 0.215381963596168 0.216768378997594 0.220630568081543 0.216554697203696 0.212021931314603 0.224468178307906 0.213576829515895 0.214039113093137 2 2 - 14480998 14481669 14481317.818 14480744 14484509 - gene protein_coding_gene FALSE TRUE AT2G34300.1|AT2G34300.2 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G51070.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT5G64030.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G29470.2); similar to dehydration-responsive protein, putative [Oryza sativa (japonica cultivar-group)] (GB:ABA96619.1); similar to dehydration-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22395.1); similar to ankyrin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82580.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) -1.34950722101385 -13.2312489360925 4.76421230747059e-08 0.000739834529227107 11.6621838517411 10.9231317428795 -1.34950722101385 0.102160758468118 AT4G01430_at 4.80140358657153 5.44098221145334 8.36936077686066 8.50857482429824 8.64452521888355 7.32031976917534 6.52116186052671 6.50858087394873 2.70609957287393 3.16938974492989 5.09272158011636 3.00062002025031 5.11579685124831 4.83348934901716 2.75082778205839 4.23114200619238 7.17294508317219 6.50978583808752 1.9586663678229 0.297237960666800 0.290666685264703 0.299339059095247 0.292389615192552 0.287622515004682 0.289438654003649 0.298650566102647 0.291861388648636 0.313590728668858 0.288852367889407 0.291667040118112 0.287622515004682 0.287622515004682 0.296931565016999 0.295614834644356 0.287622515004682 0.292095092020373 0.287622515004682 0.306541940195244 4 4|0 +|/ 586767 587822 587375.889 585598 588029 + gene protein_coding_gene FALSE TRUE AT4G01430.1|AT4G01430.2 nodulin MtN21 family protein similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G01070.1); similar to Os06g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056575.1); similar to Os02g0103600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045606.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE82165.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620)|similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT1G01070.1); similar to Os06g0107600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056569.1); similar to Os02g0103500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045604.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE82165.1) 2.30984692470248 13.2068210300755 4.85569355498623e-08 0.000753992095218262 11.6533213003201 10.7392642863698 2.30984692470248 0.255636342508663 AT1G79440_at 8.46318582863986 8.4177847502486 8.41884668463024 8.05713056901883 9.44383634145266 8.59226017772842 6.74005525725505 5.89504225037033 4.56742347481407 5.33244022484242 8.58284581859112 8.28004042189925 7.96602952074628 8.41680422140475 7.90353118783682 6.61832809511843 7.25093155846356 7.61533886898561 5.11611021512854 0.214533708732321 0.213454991789343 0.216573381546439 0.215476918552998 0.218521040243657 0.223171451112740 0.218592062918157 0.223507461412625 0.230661817280909 0.222503054745193 0.217083533032327 0.214281614721506 0.213454991789343 0.221671078940554 0.220493495490674 0.214203295023567 0.226253732260839 0.213454991789343 0.226917489891043 1 1|0 -|/ 29887768 29888989 29888364.667 29887103 29892303 - gene protein_coding_gene FALSE TRUE AT1G79440.1 ALDH5F1 (SUCCINIC SEMIALDEHYDE DEHYDROGENASE); 3-chloroallyl aldehyde dehydrogenase/ succinate-semialdehyde dehydrogenase Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004). Identical to Succinate semialdehyde dehydrogenase, mitochondrial precursor (EC 1.2.1.24) (At-SSADH1) (NAD(+)-dependent succinic semialdehyde dehydrogenase) (Aldehyde dehydrogenase 5F1) (ALDH5F1) [Arabidopsis Thaliana] (GB:Q9SAK4;GB:Q9SEK4); similar to ALDH2B4 (ALDEHYDE DEHYDROGENASE 2), 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) [Arabidopsis thaliana] (TAIR:AT3G48000.1); similar to putative succinic semialdehyde dehydrogenase [Azoarcus anaerobius] (GB:ABK58629.1); contains InterPro domain NAD-dependent aldehyde dehydrogenase; (InterPro:IPR012303); contains InterPro domain Succinic semialdehyde dehydrogenase; (InterPro:IPR010102); contains InterPro domain Aldehyde dehydrogenase; (InterPro:IPR002086) 2.03645399747406 13.1799371452651 4.95858403772421e-08 0.000769919343537438 11.6435305544841 14.4207956573642 2.03645399747406 0.216983826156305 AT2G36050_at 4.421355312604 4.40297136451846 1.75952944961165 2.34428234618422 2.60478484965356 2.57298622415769 2.85805532621156 2.59066116123137 6.94479257842801 4.25368214827539 5.53727269354698 4.20393155651483 3.01019882179185 3.78524685114184 3.91467515840068 3.49095678261163 2.23177384722303 4.27839174059555 4.80291750174034 0.283498461636461 0.277198362904675 0.269776074937745 0.274562070500352 0.280998159220216 0.272851110985674 0.268711397431696 0.277378569859412 0.303237360971483 0.268711397431696 0.278454788141105 0.269510074195208 0.273661797211276 0.268711397431696 0.269270293378646 0.271556929442355 0.283245617475466 0.268711397431696 0.270067747594751 2 2 - 15142962 15143377 15143205.545 15142651 15143828 - gene protein_coding_gene FALSE TRUE AT2G36050.1 ATOFP15/OFP15 (Arabidopsis thaliana ovate family protein 15) similar to ATOFP18/OFP18 (Arabidopsis thaliana ovate family protein 18) [Arabidopsis thaliana] (TAIR:AT3G52540.1); similar to H0913C04.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86167.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) -1.38755327587126 -13.1508281241578 5.07266873659282e-08 0.0007875825480434 11.6328853356378 7.51450492475133 -1.38755327587126 0.111453748160325 AT1G80840_at 3.93206741742265 4.55358956728061 9.24739251912502 9.04924730901122 2.65728808920131 3.08022398171087 1.82773085480871 1.48371187153068 2.92723419988216 1.67482803214637 2.29818020276652 1.94852471351384 2.32147053381728 2.17864389358219 2.29044079527007 2.65223043155605 1.96073537475004 2.18848123782887 1.757882120932 0.292070263785493 0.297103361392110 0.295672243738876 0.293184629492997 0.293597798577644 0.292370207553963 0.292211424221528 0.295053194050082 0.307325997552194 0.284273832287809 0.28020073023502 0.283439593477213 0.281092120046832 0.28020073023502 0.293195785065591 0.28799638815458 0.285954973448061 0.284830437271243 0.280572604716478 1 1|0 +|/ 30389537 30390198 30390023.429 30388583 30390391 + gene protein_coding_gene FALSE TRUE AT1G80840.1 WRKY40 (WRKY DNA-binding protein 40); transcription factor Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. Identical to Probable WRKY transcription factor 40 (WRKY DNA-binding protein 40) (WRKY40) [Arabidopsis Thaliana] (GB:Q9SAH7); similar to WRKY18 (WRKY DNA-binding protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT4G31800.2); similar to transcription factor wrky [Brassica napus] (GB:ABA71354.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.58455999695011 13.1485329267271 5.08178468056007e-08 0.00078894707165695 11.6320440206821 6.65381637569761 1.58455999695011 0.147124469664698 AT2G45470_at 7.40986110661013 8.03121502488739 3.26220818497912 3.23848491585202 4.20773995985814 4.51537847173425 8.11516324745913 8.44796145124454 8.03186919530525 8.28510138002297 9.98123207699634 10.3268758929010 9.21210243067927 9.43384357222761 10.3538621325747 9.14442710793312 7.39972976787266 9.188184953975 8.25425546474476 0.188985392217788 0.192699867281444 0.216042904860091 0.202774604392925 0.199034060129245 0.223165412303731 0.177913294836711 0.185018769542823 0.190433016980424 0.18278177154852 0.178304209678510 0.183568242045024 0.179187171152631 0.191475117410526 0.183822261822077 0.177913294836711 0.200554998019002 0.177971916434410 0.184401727619902 2 2 - 18749979 18750374 18750172.909 18749614 18751185 - gene protein_coding_gene FALSE TRUE AT2G45470.1 FLA8 (Arabinogalactan protein 8) Identical to Fasciclin-like arabinogalactan protein 8 precursor (AtAGP8) (FLA8) [Arabidopsis Thaliana] (GB:O22126;GB:Q56ZW9;GB:Q8L9B1;GB:Q9FR46); similar to FLA10 (fasciclin-like arabinogalactan-protein 10) [Arabidopsis thaliana] (TAIR:AT3G60900.1); similar to fasciclin-like protein FLA5 [Triticum aestivum] (GB:ABI95395.1); similar to Os04g0574200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053617.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -1.50273688128689 -13.1375327706702 5.1257223208251e-08 0.00079571713308489 11.6280078824939 14.6887220062877 -1.50273688128689 0.133155368332178 AT1G51270_at 5.61535943862754 5.33144074114202 4.17170576789421 3.86580273859993 3.72077334793375 3.65009015432399 5.84779854779261 4.77529584191266 4.76558827403388 5.28612552414667 3.10390808167533 2.47680617428346 3.27684108072358 2.81111445533255 2.58565168420081 3.24849343972731 3.42915048164271 2.53798387490338 5.60582429406246 0.184837469048332 0.183600779035034 0.184608694959247 0.181973371815128 0.181111735403018 0.184827212063143 0.190119026241651 0.184102546452866 0.183521190537705 0.200553562287012 0.180774156570961 0.182292977746935 0.182078847422555 0.180435642811673 0.182145163476051 0.182093009491933 0.181924702516061 0.191800217504862 0.197655866330589 1 1|0 +|/ 19012189 19013973 19013276 19011656 19014379 + gene protein_coding_gene FALSE TRUE AT1G51270.1|AT1G51270.2 structural molecule| similar to vesicle-associated membrane protein, putative / VAMP, putative [Arabidopsis thaliana] (TAIR:AT2G45140.1); similar to VAP27 [Nicotiana plumba (GB:CAB65313.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Major sperm protein; (InterPro:IPR000535)|similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45000.1); similar to VAP27 [Nicotiana plumba (GB:CAB65313.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Major sperm protein; (InterPro:IPR000535) -1.9129081726003 -13.1372520422296 5.12684901533012e-08 0.000795840772649694 11.6279047923299 8.69874483384941 -1.9129081726003 0.199534703331235 AT2G36410_at 7.81130653683162 7.92433440111774 7.45324171928471 7.71704674257052 8.81342554726341 8.5959006714087 6.45067647572084 6.18445182716995 6.75297175162944 5.21777806210242 8.16579915841898 7.26887726468398 7.9027596033914 7.76165418068415 7.07729901011309 6.73525887590062 7.30960271101374 6.72012364885304 5.90676778293167 0.235602620634283 0.236485757293231 0.235942642245969 0.236140263860359 0.237218902777235 0.237081845816504 0.24961413244631 0.249350222628983 0.246519999074208 0.249634152229659 0.230720017437029 0.242604477476363 0.244967168809921 0.230345567897059 0.242225691685878 0.236310595552407 0.256274719639209 0.233117919186389 0.232995403708237 2 2 + 15286130 15286867 15286364.091 15285848 15287767 + gene protein_coding_gene FALSE TRUE AT2G36410.1|AT2G36410.2|AT2G36410.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52920.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79606.1); contains InterPro domain Protein of unknown function DUF662; (InterPro:IPR007033)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52920.2); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79606.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Protein of unknown function DUF662; (InterPro:IPR007033) 1.2303553171665 13.1349782854938 5.13598458761699e-08 0.000797207527689908 11.6270696563723 14.2822201595977 1.2303553171665 0.0775008697963111 AT2G35550_at 3.29122087952671 3.45217867412515 4.32632690750292 4.63795549429666 4.70494440814305 4.67128147778552 3.05002826817457 3.26238705844094 2.15664245414293 2.62445332473631 3.06979400725528 3.03690437255447 3.74823496476995 3.68034085703306 2.98082771368409 3.88024253258668 4.20811056813767 3.36011590004213 2.43848381524224 0.240984011379866 0.239610055631554 0.24457594134872 0.243398757198506 0.240987679285447 0.251459792786632 0.249998574187096 0.240309160234941 0.252709968476539 0.238728381084207 0.247600722392568 0.240107088083631 0.240640166050348 0.235740371194125 0.235982146808559 0.235740371194125 0.243044879821646 0.235740371194125 0.249842562522783 2 2 + 14937105 14937649 14937398.818 14936360 14937971 + gene protein_coding_gene FALSE TRUE AT2G35550.1|AT2G35550.2|AT2G35550.3|AT2G35550.4 ATBPC7/BBR/BPC7/BPC7 (BASIC PENTACYSTEINE 7); DNA binding / transcription factor|ATBPC7/BBR/BPC7/BPC7 (BASIC PENTACYSTEINE 7) similar to BPC2 (BASIC PENTACYSTEINE 2) [Arabidopsis thaliana] (TAIR:AT1G14685.1); similar to barley B recombinant [Hordeum vulgare] (GB:CAD45251.1); contains InterPro domain GAGA binding-like; (InterPro:IPR010409) 1.20510909249964 13.1258830041248 5.17270519392566e-08 0.000802855573149201 11.6237261976233 6.87558934394031 1.20510909249964 0.0711945365079654 AT3G26210_at 9.51528822649074 9.9079978437946 10.0880980860407 10.2140369627356 9.43563509902703 9.10506798891932 5.17785130972207 5.37701210305867 6.87435027315763 4.63231731501459 4.94826901238269 6.44856755289031 4.5543480190623 6.74345900829842 3.72664646120616 6.61087273138885 6.5002477127558 5.69868353868273 4.20932575013176 0.252481699289153 0.250911338886774 0.253175395503537 0.255129045209253 0.250245667724451 0.256473719630689 0.258196168475163 0.249325680893920 0.268118306229381 0.264095329673658 0.254927797760684 0.256463220785434 0.253903406874867 0.254108102617277 0.260925426354113 0.250057144489215 0.268176015269621 0.253017252540500 0.266907369731151 3 3 - 9594709 9595125 9594876.818 9594369 9596480 - gene protein_coding_gene FALSE TRUE AT3G26210.1 CYP71B23 (cytochrome P450, family 71, subfamily B, polypeptide 23); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B23 (EC 1.14.-.-) (CYP71B23) [Arabidopsis Thaliana] (GB:Q9LTM0;GB:Q6AWT7); similar to CYP71B28 (cytochrome P450, family 71, subfamily B, polypeptide 28), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13090.1); similar to CYP71B7 (cytochrome P450, family 71, subfamily B, polypeptide 7), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13110.1); similar to CYP71B29 (cytochrome P450, family 71, subfamily B, polypeptide 29), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13100.1); similar to Cytochrome P450 71B38 (GB:Q9LXM3); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 1.31569723594812 13.1058040800230 5.25478444074556e-08 0.000815542545203712 11.6163290982485 14.0488990528160 1.31569723594812 0.0977446506001864 AT2G38465_at 3.87158680108353 4.22612471087049 4.80370587011796 4.45238703824304 4.74080034644355 4.90482725088647 1.39014309311144 1.53028943811419 1.69208400016471 1.36542008396497 2.4881453602687 1.29703758851478 1.99256928587945 2.63441415867481 1.77621382237363 1.8538201922976 1.81702374324677 2.29966055364539 1.12547054495233 0.298012104762963 0.299418888206309 0.299823499715835 0.308371359980918 0.303141832450816 0.298012104762963 0.305612424226452 0.2996965445309 0.298166574636007 0.298185452946586 0.298012104762963 0.301578272573006 0.298012104762963 0.298012104762963 0.304710748268992 0.298082824144482 0.299567591984547 0.307234396832227 0.301541365740205 2 2 - 16113471 16113863 16113704.636 16113341 16113991 - gene protein_coding_gene FALSE TRUE AT2G38465.1 unknown protein 1.29821491368991 13.0998301383989 5.27947725925495e-08 0.000819322075863776 11.614124027658 5.44707580084549 1.29821491368991 0.094099080052256 AT1G52410_at 7.35776091474567 7.64272456295704 5.34449589763591 5.31268039204278 7.03143588475547 6.35204785374596 4.06643563931936 4.13712088905576 2.33502308103539 3.70033962409089 4.80823036137058 6.17598178001121 6.11398830301708 6.02988222758713 6.1757972788721 6.44392963881137 5.57777572290787 5.62474066181525 3.38720215855992 0.270685948779649 0.270367329835182 0.260832205504789 0.26242056802478 0.264141682543967 0.271698857651298 0.267501071112516 0.260832205504789 0.310998075073585 0.269488671073267 0.260832205504789 0.260832205504789 0.260832205504789 0.27093085240508 0.264954519000408 0.260832205504789 0.271701047639709 0.260832205504789 0.279715271991102 1 1 + 19528435 19528881 19528637.818 19524397 19529293 + gene protein_coding_gene FALSE TRUE AT1G52410.1|AT1G52410.2 TSA1 (TSK-ASSOCIATING PROTEIN 1); calcium ion binding / protein binding|TSA1 (TSK-ASSOCIATING PROTEIN 1) Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers. similar to (TSA1-LIKE), unknown protein [Arabidopsis thaliana] (TAIR:AT3G15950.1); similar to hypothetical protein [Trypanosoma cruzi strain CL Brener] (GB:XP_814574.1)|similar to (TSA1-LIKE), unknown protein [Arabidopsis thaliana] (TAIR:AT3G15950.1); similar to PREDICTED: similar to Viral A-type inclusion protein repeat, putative [Danio rerio] (GB:XP_685984.1) 1.46854514888129 13.0788481183767 5.36720891141473e-08 0.000832883478873337 11.6063637159629 10.4104106049628 1.46854514888129 0.128198470771039 AT1G70985_at 3.39946704627672 3.40870760705892 3.19560628539192 3.40931281351524 2.74221417109899 3.08253207997308 6.46913802432775 6.87729807536698 4.55390026878207 5.29142118570641 4.04251298509242 4.29783352634545 5.1869946607289 4.60681181074516 3.50617787199846 4.79463025623838 5.61473595547756 4.01500287549923 5.76371877983156 0.267179964361017 0.258550185834476 0.262739339778461 0.263487614003954 0.258581924756119 0.26408771582156 0.300789953114662 0.293712716458881 0.27095463717314 0.262151357565332 0.258550185834476 0.258550185834476 0.260231135090839 0.262369868561981 0.261293186337926 0.259573774293191 0.268922020648843 0.259897199010005 0.272004790323911 1 1 - 26768449 26768812 26768632.545 26768334 26768947 - gene protein_coding_gene FALSE TRUE AT1G70985.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G23050.1); similar to Os01g0112000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041810.1); similar to OJ1116_C07.3 [Oryza sativa (japonica cultivar-group)] (GB:BAC00686.1); similar to Os09g0332100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062903.1) -1.31308113471855 -13.0148940879846 5.64453654644795e-08 0.000875862735912329 11.5825599596192 8.92858496497905 -1.31308113471855 0.0991358220585357 AT3G13950_at 6.92125042974238 7.21114420674773 9.51934750409208 9.60210842563365 7.54794838426134 6.72440565744117 2.31848588276485 2.50464547750991 3.27842455903655 2.97205854540574 2.40367376101520 2.42427399105479 2.74162443226444 3.00173445567677 2.22089063628439 3.16115260051544 2.88394791591744 2.89614003329267 3.03995988553681 0.368276187475536 0.376516877136811 0.362288064915409 0.372828938919954 0.365636699433106 0.371422515090317 0.339295108665455 0.338977742101942 0.332854492140863 0.332854492140863 0.335806925214141 0.338295446096558 0.334537427089440 0.332854492140863 0.338627447776483 0.332854492140863 0.341284996398016 0.332854492140863 0.338094577983823 3 3 + 4604165 4604496 4604336.091 4604156 4605432 + gene protein_coding_gene FALSE TRUE AT3G13950.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13266.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80572.1) 1.61471819596272 13.0055004109425 5.68656594786892e-08 0.000882327572471342 11.5790444883941 9.45041402514697 1.61471819596272 0.155148673501581 AT3G16660_at 9.6020008611594 9.87358921055506 6.63629353444025 6.76431791089439 8.13516354656569 7.68765029889835 8.4846068307346 8.89645891322664 8.90722305668959 7.71779120133742 6.92749843203216 7.90413704558208 7.20618798259946 7.73067081718095 8.32795099222886 6.41433984119907 7.36604938209827 7.43367887260255 8.27884684382203 0.268215518213849 0.262079463603444 0.268556561087703 0.250393369643876 0.267558715090177 0.271554537921646 0.280708843733976 0.261726256188227 0.268183871581420 0.260556706280649 0.250393369643876 0.250393369643876 0.250393369643876 0.261081039674321 0.250393369643876 0.26539066326081 0.250393369643876 0.265587985413005 0.250393369643876 3 3 + 5676929 5677103 5677024.143 5676835 5677921 + gene protein_coding_gene FALSE TRUE AT3G16660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G16670.1); similar to phylloplanin [Nicotiana tabacum] (GB:ABE03627.1) -1.39789024723926 -12.9619219974314 5.8860434716587e-08 0.000913219644627847 11.5626712344937 16.1175607406293 -1.39789024723926 0.117376577993747 AT1G28190_at 4.04834504991368 4.71860767482824 5.63553059461778 5.50862956847985 5.3757318117749 5.38758162018165 1.59210742279264 1.85297646034304 1.93251883467162 2.14090904678283 2.1609951913235 2.60712824271057 2.68966239179231 2.63801670463594 1.99097300856296 2.37168923417214 2.87506834177567 2.38998502781015 1.96217684916864 0.315714454674676 0.315174305515581 0.345283852256303 0.329705967488168 0.329741128044175 0.319557048736323 0.311720769703994 0.314022744446903 0.317262382495637 0.311720769703994 0.314274374471961 0.311720769703994 0.311720769703994 0.311720769703994 0.311720769703994 0.311720769703994 0.311720769703994 0.312619625199319 0.311720769703994 1 1 - 9847044 9847567 9847399.909 9846871 9847910 - gene protein_coding_gene FALSE TRUE AT1G28190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12340.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94082.1) 1.43871538555051 12.8992566398679 6.18633756128316e-08 0.00095974840925747 11.5389391855703 6.50359278106094 1.43871538555051 0.126406799177789 AT2G46680_at 7.30312345112499 7.79069905803847 9.78735852011069 9.92462339443888 9.87826967451942 9.23114935041943 8.59614842436642 8.4405573033327 3.47836301957099 5.03565596805958 3.91245142181081 4.77127141598088 6.10916958375043 4.89155463088118 3.90899673152085 5.82492902048735 8.57979757723195 5.7772676158364 3.69157860616658 0.246039292416896 0.239624774282579 0.239603753646604 0.241663880193539 0.244874294046011 0.239581041513492 0.242174358464361 0.239577012886562 0.239577012886562 0.240326231334299 0.24520688294089 0.243437316873859 0.241789889837048 0.239577012886562 0.247962233864597 0.239577012886562 0.246234949626913 0.242370172338235 0.241399508849685 2 2 - 19172847 19173630 19173240.273 19172473 19174019 - gene protein_coding_gene FALSE TRUE AT2G46680.1|AT2G46680.2 ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription factor|ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7) encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. Identical to Homeobox-leucine zipper protein ATHB-7 (Homeodomain transcription factor ATHB-7) (HD-ZIP protein ATHB-7) (ATHB-7) [Arabidopsis Thaliana] (GB:P46897;GB:Q9SLF9); similar to ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61890.1); similar to Leucine zipper, homeobox-associated; Homeodomain-related [Medicago truncatula] (GB:ABE91214.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) 1.53805769703911 12.8765383386428 6.29928175868497e-08 0.0009772075792248 11.5302804835458 13.6392222875205 1.53805769703911 0.144740848546489 AT2G25730_at 8.30903461792916 8.21007498071804 8.31803087445935 8.11226441801815 9.07408927587582 8.38024326145747 5.96041524565002 5.99921645333528 5.5991531752763 5.69321346663483 7.06758788785784 6.9731506665036 7.116841774583 7.03588910353511 6.79545844106487 6.48602877279551 7.76005774740229 6.98065041121618 5.24952418569051 0.203450854076729 0.200333014795772 0.202428115852922 0.209102354169365 0.211783522150252 0.216879235816256 0.210103450177661 0.202739694877522 0.214802196730945 0.207363215893276 0.207168491564655 0.203022512320954 0.202502458455056 0.201383837422784 0.202718586471462 0.199899117995925 0.208077996196158 0.208963524451650 0.206021055628741 2 2|0 -|/ 10963863 10965393 10964412 10963380 10979807 - gene protein_coding_gene FALSE TRUE AT2G25730.1 binding / heme binding similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83627.1); similar to Os01g0593000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043457.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83626.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Globin-related; (InterPro:IPR012292); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.43223306223191 12.8325561354771 6.52435900442585e-08 0.00101205856876654 11.5134335259897 14.0658819958406 1.43223306223191 0.126585750982647 AT4G39950_at 10.3265531613668 10.3128187210006 10.6974972389070 10.7583391699264 9.4380028940168 8.79976946622912 8.07377292237023 8.0368207297642 4.16560017593567 4.95211619484237 5.95549504508323 7.19734348806515 6.99544780406729 6.79282679948629 6.11937587727714 6.87365845544033 5.64848096038185 7.06683338246872 4.71975417335097 0.265175201901411 0.26788295593894 0.273294057813558 0.278538025922722 0.266264221355916 0.275148500450810 0.265620379868100 0.273609189183483 0.285430626172985 0.27143622697036 0.266961625075273 0.265552223169362 0.269755978667305 0.275511222663879 0.265175201901411 0.265175201901411 0.276445891031196 0.271527879137780 0.276425313404127 4 4 + 18526885 18527253 18527067.636 18525240 18527573 + gene protein_coding_gene FALSE TRUE AT4G39950.1 CYP79B2 (cytochrome P450, family 79, subfamily B, polypeptide 2); oxygen binding Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. Identical to Cytochrome P450 79B2 (EC 1.14.-.-) (CYP79B2) [Arabidopsis Thaliana] (GB:O81346;GB:Q9SMR0); similar to CYP79B3 (cytochrome P450, family 79, subfamily B, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G22330.1); similar to cytochrome P450 [Brassica napus] (GB:AAN76810.1); similar to Cytochrome P450 79B1 (GB:O81345); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 1.35230167690088 12.8306057168366 6.53454046711613e-08 0.00101357257185438 11.5126838652117 15.1522832419027 1.35230167690088 0.111159538426231 AT2G30150_at 5.48237553774139 5.98786591239016 3.74418093634739 3.92030719346257 4.33282786969205 4.05754270738519 6.97555231013552 7.55805389892016 5.44768476351625 6.9146012798031 6.03427062127353 6.3041584465179 5.9079580675439 5.91444962944651 6.30209328093239 6.45772542447378 4.98793105634005 4.95043964964417 6.9403611864149 0.217520862954888 0.214936863442537 0.215838783126903 0.214678937053131 0.21540691767614 0.220009056935635 0.228614675783533 0.227653486627748 0.217521765566762 0.218156836896418 0.215747407518188 0.21710269894771 0.215109047039249 0.216457888757693 0.219079293785635 0.215446056374368 0.219447441953806 0.220906304083774 0.217957744613898 2 2 + 12882666 12883152 12882955.455 12881783 12883199 + gene protein_coding_gene FALSE TRUE AT2G30150.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G30140.1); similar to Os01g0805400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044560.1); similar to UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] (GB:AAF61647.1); similar to Os05g0493600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055920.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.53204235464911 -12.8158677505883 6.61203505041167e-08 0.00102552663631885 11.5070121106617 11.4031353033924 -1.53204235464911 0.144956499280777 AT3G57260_at 12.3941815327638 12.3381129941830 13.233185867469 13.1136930447253 12.3040846305566 12.0234942428690 6.6351399120525 6.35310472072326 8.15564263078694 5.97742674118195 4.86564713051821 5.61723525638598 7.27972706985346 6.75721505766169 5.40946773569664 7.14359969328049 7.33085868404282 5.51175109077704 7.2190771516137 0.250189158430355 0.248094531201510 0.255577041599976 0.253461572887501 0.247571710476258 0.256295308668756 0.245703215997845 0.252148179558676 0.250216600835546 0.24400698986333 0.245009908347079 0.244251094696368 0.241670576990231 0.241670576990231 0.245473347630151 0.244692776106767 0.242433522440901 0.251769729435984 0.248808976387603 3 3 - 21199717 21200255 21200040.455 21199496 21200838 - gene protein_coding_gene FALSE TRUE AT3G57260.1 BGL2 (PATHOGENESIS-RELATED PROTEIN 2); glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds beta 1,3-glucanase Identical to Glucan endo-1,3-beta-glucosidase, acidic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta- glucanase) (Beta-1,3-endoglucanase) (Pathogenesis-related protein 2) (PR-2) (Beta-1,3-glucanase 2) (BG2) [Arabidopsis Thaliana] (GB:P33157;GB:Q8LD94;GB:Q9M2M1); similar to BG3 (BETA-1,3-GLUCANASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57240.1); similar to beta-1,3-glucanase 2 (GB:AAA32755.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 1.18026759836191 12.8015244746829 6.68841379645694e-08 0.00103730609569251 11.5014802091914 17.7277845628201 1.18026759836191 0.0725379902429977 AT2G38470_at 8.03824200595944 7.90657577704302 8.85829566877068 9.14399257355428 8.40197496100631 7.91527740574254 4.74428553871906 4.30079118789334 6.24605050076936 4.86195356891352 5.74743996669754 6.81707153659264 4.87459645337675 5.67518763614036 5.6439623263519 5.62635486910491 5.90790524130271 6.68177688592625 4.94294446446648 0.266874271155344 0.265941795065722 0.269290750345605 0.271312821964778 0.268968024193427 0.274318688937901 0.265941795065722 0.265941795065722 0.266928641854682 0.265941795065722 0.273168807540527 0.265941795065722 0.265941795065722 0.277417379546745 0.274884948068555 0.265941795065722 0.266552026521684 0.278807933905525 0.272808319390936 2 2 + 16117036 16117583 16117364.273 16115537 16117844 + gene protein_coding_gene FALSE TRUE AT2G38470.1 WRKY33 (WRKY DNA-binding protein 33); transcription factor Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Identical to Probable WRKY transcription factor 33 (WRKY DNA-binding protein 33) (WRKY33) [Arabidopsis Thaliana] (GB:Q8S8P5); similar to WRKY4 (WRKY DNA-binding protein 4), transcription factor [Arabidopsis thaliana] (TAIR:AT1G13960.1); similar to WRKY transcription factor 33 [Capsella rubella] (GB:AAP82932.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.42694110562579 12.7995167910922 6.69918107440945e-08 0.00103890900101942 11.5007049383725 13.0247309110793 1.42694110562579 0.126284910268982 AT1G61580_at 5.89714549587448 6.03598939239871 6.6125118421491 6.80602162582669 6.14295148445845 6.31734608809539 5.24974413865235 5.41860982281208 4.74761234364961 4.67140837685219 5.54676481421187 6.16189214055519 6.15817169959133 6.00092630758736 6.90938248933668 5.89343449990893 6.41956043119762 6.00766567019731 4.65120878624345 0.17797710878858 0.175651103204954 0.196155592629483 0.179978960678759 0.177040904108835 0.179022982669550 0.18133851060875 0.185049258846108 0.198759743514213 0.193700482381010 0.178121395630507 0.178113226787491 0.187303561445076 0.179845554340496 0.175438491601905 0.182876189965063 0.180807525860644 0.185011546153345 0.182128356271074 1 1 - 22724546 22725135 22724838 22724357 22726817 - gene protein_coding_gene FALSE TRUE AT1G61580.1 ARP2/RPL3B (ARABIDOPSIS RIBOSOMAL PROTEIN 2); structural constituent of ribosome Identical to 60S ribosomal protein L3-2 (ARP2) [Arabidopsis Thaliana] (GB:P22738;GB:Q9SY92); similar to ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G43170.3); similar to ribosomal protein (GB:AAA66161.1); similar to ribosomal protein L3 [Lycopersicon esculentum] (GB:AAR17783.1); similar to ribosomal protein L3A [Nicotiana tabacum] (GB:AAQ96335.1); contains InterPro domain Translation factor; (InterPro:IPR009000); contains InterPro domain Ribosomal protein L3; (InterPro:IPR000597) 1.13324190101144 12.7992091665896 6.70083253848524e-08 0.00103909810174291 11.5005861279726 11.4736906156943 1.13324190101144 0.0588520114359516 AT2G22860_at 5.49917027684117 5.90326975352943 5.87880886886369 5.84810043954025 4.01213869688385 3.88981176289707 2.17354528872704 2.30564695173301 3.37632149640167 2.35606065350025 5.20195834947942 3.98439860640388 3.59011594789095 3.75773208629759 4.36677990732189 4.40717872528025 3.81291675996962 5.32346957469767 2.82627080241389 0.27338535776439 0.265949237970715 0.269644182261428 0.271869595148143 0.264576901458944 0.26770963458374 0.280277319418186 0.277560282419456 0.268318747500234 0.272846977540254 0.262348228938249 0.262997933310937 0.264703227504431 0.262866134518010 0.263243303524014 0.264558890505046 0.262348228938249 0.264223911627704 0.267122049477754 2 2 + 9744783 9745122 9745007.455 9744687 9745378 + gene protein_coding_gene FALSE TRUE AT2G22860.1 ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR); growth factor Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor. Identical to Phytosulfokines 2 precursor (AtPSK2) [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] (PSK2) [Arabidopsis Thaliana] (GB:O81003;GB:Q7PCC1); similar to ATPSK6 (PHYTOSULFOKINE 6 PRECURSOR), growth factor [Arabidopsis thaliana] (TAIR:AT4G37720.1); similar to TPA: TPA_exp: putative phytosulfokine peptide precursor [Brassica napus] (GB:DAA00277.1); contains InterPro domain Phytosulfokine; (InterPro:IPR009438) 1.19474565078381 12.7861961751009 6.77109869880124e-08 0.00104992656423612 11.4955552426657 8.01803803593007 1.19474565078381 0.0767423043889904 AT3G10300_at 4.86490714805535 5.22974266937548 5.11176679068459 5.07670259236544 5.59705483463968 5.08747459400858 3.37424772551206 3.73719571237914 3.61332042770286 2.80110117633779 5.03989672058286 4.59920827067877 5.72203152928943 5.69985046993374 4.38275976236216 5.35899293165475 5.10778943409279 4.07768939760451 2.80711850538022 0.272048315223851 0.273487421142654 0.276937129980090 0.268913388168706 0.274150801660615 0.273962309756998 0.272805261783851 0.278203476393268 0.288947468023462 0.277578254204 0.272789106271822 0.270194984351307 0.268913388168706 0.269056706183848 0.272722678055598 0.268913388168706 0.282182720557307 0.285151448358056 0.270927289944840 3 3 + 3186884 3188037 3187342.9 3186326 3188306 + gene protein_coding_gene FALSE TRUE AT3G10300.1|AT3G10300.2|AT3G10300.3|AT3G10300.4 calcium-binding EF hand family protein|calcium ion binding similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G04170.1); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to EF hand family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21877.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)|similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G04170.1); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to EF hand family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21877.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)|similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G04170.1); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); similar to putative cysteine protease [Pisum sativum] (GB:CAB63845.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.42070350023932 12.7820214582935 6.79381015670777e-08 0.00105338026479754 11.4939391960389 8.79607351721012 1.42070350023932 0.125478083266209 AT2G42280_at 7.4723267191948 7.25380091090449 7.7152798083976 8.01029667928154 8.94080589842908 8.36479190733174 5.17564972303524 5.01885589827146 5.93474453772823 5.35492863799489 6.1594057550392 6.04653159925956 6.71535657215955 6.14209887696684 6.01457622158673 6.68808812489411 6.70565155177764 6.64530817623289 5.58154866749618 0.179984963300146 0.177340758057171 0.183627873902036 0.189431588375689 0.197983282521268 0.210028866668527 0.185178051662731 0.198479875410921 0.189861713242001 0.189277116183538 0.181389103794010 0.179064169412483 0.180938766221544 0.190745155840180 0.184642345764879 0.179092206933953 0.188544216671935 0.179999980639317 0.177562189944778 2 2 - 17618991 17619464 17619222.636 17618263 17620597 - gene protein_coding_gene FALSE TRUE AT2G42280.1|AT2G42280.2 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G51140.1); similar to Os08g0506700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062190.1); similar to Aldehyde dehydrogenase; Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE94655.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092)|similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G51140.1); similar to Os08g0506700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062190.1); similar to Aldehyde dehydrogenase; Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE94655.1) 1.39676087792081 12.7647848800735 6.88846132050245e-08 0.0010679870431307 11.4872561347693 13.2506598051787 1.39676087792081 0.121282173575232 AT2G44240_at 9.83575521664144 9.91368185478777 9.17458896388581 9.3876258823881 7.41016542159102 7.25890114214597 1.27874277247377 1.56659625191445 1.82671027402342 2.18101942044060 1.56886368364701 1.58406410664784 1.70259519272309 1.72935461212376 1.45769644910133 1.60034975901788 1.57680081861317 1.90919205389919 1.91753185725585 0.301775461896592 0.311189522910843 0.309925988862907 0.308729278856830 0.319046048357431 0.325232804064301 0.294801405894566 0.290018147179966 0.290018147179966 0.295659375710916 0.297386001755671 0.2953927615285 0.293047566028370 0.295151822537600 0.297643013536977 0.292554156025359 0.291492443431990 0.298397834796258 0.290018147179966 2 2 + 18298477 18299251 18298838.091 18296900 18299421 + gene protein_coding_gene FALSE TRUE AT2G44240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44220.1); similar to Os03g0807100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051640.1); similar to Os07g0573400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060067.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE82132.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) 1.16257686455670 12.7634727018494 6.89572533469823e-08 0.00106904429863827 11.4867466615136 8.78635807241768 1.16257686455670 0.0686130201777546 AT4G17500_at 4.18154096630355 4.89139543610046 6.78693123290892 7.10012239239766 4.96212760275373 4.49466007757196 2.1692598880929 2.30525675246571 3.02048192898159 2.03150889529573 2.77597959897320 2.70458000061089 3.08873698752150 3.66542453431733 2.55465728585494 4.21864966346537 3.73474855695745 3.09250933857374 2.37868213391466 0.272378159032635 0.272255718433051 0.282947389459896 0.304232781464866 0.263534866686036 0.267666012389962 0.266113195278926 0.259730268140024 0.259730268140024 0.268887828507747 0.259730268140024 0.265850011064427 0.259730268140024 0.268084354426403 0.262809815147535 0.263854863481111 0.270278803723095 0.262859416555153 0.265902930152935 4 4 + 9759662 9760189 9759888.091 9759337 9760353 + gene protein_coding_gene FALSE TRUE AT4G17500.1 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription factor/ transcriptional activator Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Identical to Ethylene-responsive transcription factor 1A (Ethylene-responsive element-binding factor 1A) (EREBP-1A) (AtERF1) (ERF1A) [Arabidopsis Thaliana] (GB:O80337;GB:Q93Z36;GB:Q9SUK1); similar to ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT5G47220.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD64951.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.60080841269386 12.7342263221981 7.05980761405588e-08 0.00109441137633094 11.4753652262826 7.46456265949851 1.60080841269386 0.158513075386105 AT4G14270_at 10.8994238826955 11.0022190591756 11.2326131057907 11.1744316795455 11.8820697599172 11.5945888133126 9.9565137263242 9.94037589475804 8.4720571570329 9.30159535946095 10.0687955241324 9.98752810130187 10.5460896745575 10.1581739956906 9.8298610779139 9.93408665957086 10.5457543897328 10.3039539144987 9.13510350697275 0.12765041074509 0.125337562644436 0.13485103510017 0.126903114300398 0.125836634148218 0.133748414499765 0.127521030625438 0.123161488428221 0.156117503188842 0.129204042717921 0.128265108633120 0.130009074673959 0.122438779737058 0.123296321738033 0.124847679905707 0.126987995547303 0.131665519456322 0.130952179540252 0.132248072878885 4 4 + 8218540 8219005 8218716.455 8218373 8219317 + gene protein_coding_gene FALSE TRUE AT4G14270.1|AT4G14270.2 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. similar to ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15) [Arabidopsis thaliana] (TAIR:AT2G41430.2); similar to Aldehyde dehydrogenase [Medicago truncatula] (GB:ABE94464.1)|similar to ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15) [Arabidopsis thaliana] (TAIR:AT2G41430.2); similar to ERD15 [Capsicum annuum] (GB:ABB89735.1); similar to Aldehyde dehydrogenase [Medicago truncatula] (GB:ABE94464.1) 1.11174388746124 12.7254697740047 7.10975624912711e-08 0.00110208331617719 11.4719478198155 20.5309623693551 1.11174388746124 0.0538580064498888 AT1G02470_at 4.5622215246003 4.65685945416578 7.17249613368544 7.4831509012125 6.57891888406144 6.14080724607161 2.50037086990414 3.22659423177618 2.11228119291729 2.6757593587175 2.19729796868362 2.51784263467189 2.70010623828099 2.42933441993707 2.40026552457705 2.28009836613527 2.63843717467411 2.34886073348980 2.30223521045908 0.297436466339634 0.306613074504673 0.330224852710916 0.307919079026972 0.320046008808603 0.311510047340249 0.303750429426989 0.310692714594863 0.299875072323335 0.295049825449115 0.305900017884501 0.312918938555967 0.295758244179982 0.301982865069894 0.300304595238718 0.300618056330987 0.312110868635761 0.294105339064602 0.3004310734913 1 1|0 -|/ 511920 513467 512858.5 511765 513611 - gene protein_coding_gene FALSE TRUE AT1G02470.1|AT1G02470.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02475.1); similar to Streptomyces cyclase/dehydrase [Medicago truncatula] (GB:ABE82400.1); contains InterPro domain Streptomyces cyclase/dehydrase; (InterPro:IPR005031) 1.59146844983554 12.7230079079547 7.12386813413062e-08 0.00110419956079025 11.4709862208186 7.69140522397843 1.59146844983554 0.157166117342528 AT3G51660_at 8.2903118454303 8.96832929381427 9.56165067449314 9.66376611160456 9.43373072141881 8.59485570823885 5.93392216080065 5.92416210038297 6.42960840828314 5.16811366370986 7.10850204978558 7.29163407080423 7.4237302864158 7.74738599663016 6.55736701636757 6.7384863497387 6.44869521167038 6.44088655060826 4.77648149733261 0.292423149842685 0.283484202176222 0.313036799818381 0.301800263251849 0.283999458132073 0.301939733423629 0.286522837794265 0.279463501766055 0.296951164539833 0.283091209459743 0.279463501766055 0.279463501766055 0.279463501766055 0.292677430970120 0.283377153340173 0.280135236884334 0.300477367345294 0.295585755187579 0.293288276692742 3 3|0 -|/ 19175223 19176031 19175494.4 19175042 19176226 - gene protein_coding_gene FALSE TRUE AT3G51660.1 macrophage migration inhibitory factor family protein / MIF family protein similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G01650.1); similar to Macrophage migration inhibitory factor family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95632.1); contains InterPro domain Macrophage migration inhibitory factor; (InterPro:IPR001398) 1.77291876944625 12.6993381420005 7.26111102495354e-08 0.00112539959775755 11.4617226932922 14.5101679759952 1.77291876944625 0.187502294064134 AT3G55120_at 4.81870199595159 5.18941771129931 3.66725959281191 3.53486969794829 3.66839879358647 4.16389475364677 6.8222933135766 6.98426591938276 4.99649490250551 5.90271206869571 4.91165798827588 4.86947615873647 4.59540594045678 4.67050881919538 4.55056804353843 3.99186162841984 5.18895256374416 4.79646560622186 4.67741181478667 0.269070488523763 0.266926540732661 0.272818619222174 0.27453642667764 0.262525821740915 0.262525821740915 0.275509349439266 0.272355666444419 0.267305054002502 0.269242112825326 0.262525821740915 0.267760307140574 0.266836668105134 0.271279057696940 0.263896969396175 0.262525821740915 0.268250951083831 0.262525821740915 0.262525821740915 3 3|0 -|/ 20441326 20442121 20441762.667 20441091 20442447 - gene protein_coding_gene FALSE TRUE AT3G55120.1 TT5 (TRANSPARENT TESTA 5); chalcone isomerase Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. Identical to Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone isomerase) (TRANSPARENT TESTA 5 protein) (CHI) [Arabidopsis Thaliana] (GB:P41088;GB:Q8W532;GB:Q9LE13;GB:Q9LF74;GB:Q9LF75); similar to chalcone isomerase [Arabidopsis thaliana] (TAIR:AT5G66220.1); similar to Chalcone--flavonone isomerase (Chalcone isomerase) (GB:O22651); contains InterPro domain Chalcone-flavanone isomerase; (InterPro:IPR003466) -1.34520409698828 -12.6749441423641 7.40556412708275e-08 0.00114771432841528 11.4521411730628 9.80067190006024 -1.34520409698828 0.113044387361574 AT1G77120_at 4.68765931118619 4.39090569742513 6.18236203885382 5.80248625809065 5.83642140923337 5.82160861270023 4.47191768643070 4.50569478506189 2.91946198127988 3.66350138391982 4.0855347449294 3.93198660948207 4.41599391000398 4.35088740935369 3.99732437186231 4.02535740080187 4.79727965899111 4.34629320114066 3.09357666537901 0.232864778333105 0.232791666344039 0.238363422845089 0.233723221974297 0.235018777484391 0.239227163121684 0.235248435402375 0.232467762546553 0.245956659325390 0.238513298689266 0.232103718076062 0.234637630451154 0.234594490823876 0.232103718076062 0.233821141371644 0.232103718076062 0.236001025653502 0.237255072873277 0.248917398777132 1 1|0 +|/ 28981334 28982073 28981699.8 28980288 28982311 + gene protein_coding_gene FALSE TRUE AT1G77120.1 ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. Identical to Alcohol dehydrogenase (EC 1.1.1.1) (ADH1) [Arabidopsis Thaliana] (GB:P06525); similar to ADH2 (ALCOHOL DEHYDROGENASE 2), formaldehyde dehydrogenase (glutathione) [Arabidopsis thaliana] (TAIR:AT5G43940.1); similar to alcohol dehydrogenase [Arabis glabra] (GB:AAF23537.1); similar to alcohol dehydrogenase [Halimolobos perplexa var. lemhiensis] (GB:AAF23539.1); similar to alcohol dehydrogenase [Arabis lyallii] (GB:AAF23546.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 1.20749701474397 12.6308032813315 7.67494996864175e-08 0.00118938699664041 11.4347138020408 8.94705472829618 1.20749701474397 0.0836641228765402 AT4G39030_at 7.0273369901557 6.95589407615419 9.5875125865392 9.65584938931787 6.17992692628277 5.27759869380817 1.7198055215953 1.45156760150001 2.17355255046336 1.91220444520147 2.11762130251635 2.08984933336978 1.56684045568653 2.24613539407337 2.23584485893153 1.90421476436532 1.27444139033216 1.90863863309879 2.12280047572382 0.253234492157573 0.26427195575143 0.257053498773397 0.249599447052807 0.249879932052810 0.273357719874263 0.244332116303213 0.240855366849309 0.249193312139721 0.243188545881704 0.242489362215015 0.240855366849309 0.240855366849309 0.244964991923515 0.242267833686346 0.240855366849309 0.261673791248104 0.245787900847885 0.244379375898166 4 0|4 /|+ 18187786 18188280 18188017.3 18185661 18189074 + gene protein_coding_gene FALSE TRUE AT4G39030.1 EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5); antiporter/ transporter Encodes an orphan multidrug and toxin extrusion transporter. Essential component of salicylic acid-dependent signaling for disease resistance. Member of the MATE-transporter family. Expression induced by salicylic acid. Mutants are salicylic acid-deficient. Identical to Enhanced disease susceptibility 5 (Eds5) (Salicylic acid induction deficient 1) (Sid1) (EDS5) [Arabidopsis Thaliana] (GB:Q945F0;GB:Q9SVJ0); similar to enhanced disease susceptibility protein, putative / salicylic acid induction deficient protein, putative [Arabidopsis thaliana] (TAIR:AT2G21340.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE88792.1); contains domain DNA-DAMAGE-INDUCIBLE PROTEIN F (PTHR11206:SF3); contains domain MULTIDRUG RESISTANCE PUMP (PTHR11206) 1.61749998052644 12.6192434334366 7.74724420176512e-08 0.00120051296150552 11.4301306569580 7.97567018500729 1.61749998052644 0.163801685854875 AT1G23140_at 7.36497127746583 7.48841724098084 5.598382740432 5.9643714867114 6.17959297655704 5.68492999063379 6.2263540966779 5.79637616252728 5.91025665044344 5.64312999992233 3.42668708319267 3.53757912830115 4.07133484915240 3.76646344113371 2.72433413680201 3.60373931911055 3.97158113051382 3.59603590518884 5.19641762742159 0.242003674533235 0.256862047959810 0.243680018274327 0.258427886828409 0.247178328833155 0.254365332696318 0.246907014762757 0.248870088526177 0.261242862496366 0.25717262852177 0.244728273267757 0.245491494659198 0.249045526634401 0.250653544423539 0.253182104589083 0.244042466149060 0.255315430946839 0.242003674533235 0.245953536799082 1 1 - 8202360 8203132 8202758.364 8202250 8203204 - gene protein_coding_gene FALSE TRUE AT1G23140.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70810.1); similar to C2 [Medicago truncatula] (GB:ABE89197.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -1.4291295571254 -12.5644253279243 8.10029036364208e-08 0.00125513999184634 11.4082878147688 10.8731682298834 -1.4291295571254 0.131653450953493 AT2G46830_at 8.84687726158981 8.89584368396 8.4410582698701 8.61230926553668 8.7929103818504 8.63900600654938 11.0343121323706 10.9464436854735 10.8223101065335 10.7755765521629 9.78732612026596 9.85629889201495 10.0945150543115 10.0951905036133 9.23183852670394 10.7263369354112 10.4063888875811 9.87417858397695 10.9221800657152 0.0930768951351176 0.0901452232095899 0.100285580779612 0.0924355829166995 0.0873115547566062 0.0953289295623914 0.0875711380530044 0.0877211691933198 0.0904787911069474 0.0873014315753382 0.0855038829530511 0.0876817734697402 0.0855038829530511 0.0900615803177937 0.0907083722853324 0.0859722469535864 0.086268465483138 0.087834221213446 0.0855038829530511 2 2|0 +|/ 19255138 19255711 19255375 19252746 19255983 + gene protein_coding_gene FALSE TRUE AT2G46830.1|AT2G46830.2 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); transcription factor encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of ARABIDOPSIS. similar to LHY (LATE ELONGATED HYPOCOTYL), DNA binding [Arabidopsis thaliana] (TAIR:AT1G01060.3); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to LHY (LATE ELONGATED HYPOCOTYL), DNA binding [Arabidopsis thaliana] (TAIR:AT1G01060.3); similar to late elongated hypocotyl [Castanea sativa] (GB:AAU20773.1) -1.07028063169126 -12.5601769601694 8.12837189022676e-08 0.00125940994067173 11.4065874565708 19.7006108006278 -1.07028063169126 0.0434818688098222 AT4G39260_at 11.4118454968752 11.1623241450522 11.5907088667526 11.4222665139227 12.0905266672456 11.7112642694292 9.81062800072866 9.23077020958618 9.37544554062984 9.37949618544002 10.9111107168296 11.1070931512178 10.9697068869881 11.0786263262149 11.1887127424165 10.8106008565629 11.0132738686705 10.5651704783422 9.46960021600715 0.0968478169442535 0.0964550224966097 0.098566062409704 0.0984758483687014 0.097484932065268 0.0976794876028519 0.102019098106676 0.103059023995307 0.107440105738 0.104509096333495 0.0957928476391458 0.0953994891986244 0.0984666330946754 0.0990480259067752 0.0962038869254353 0.0971585295083219 0.0989196764994848 0.0986134906125163 0.0975953034570976 4 4 - 18274238 18274922 18274531.273 18273893 18275073 - gene protein_coding_gene FALSE TRUE AT4G39260.1|AT4G39260.2|AT4G39260.3|AT4G39260.4 ATGRP8/GR-RBP8 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1, GLYCINE-RICH PROTEIN 8); RNA binding Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. Identical to Glycine-rich RNA-binding protein 8 (Protein CCR1) (GRP8) [Arabidopsis Thaliana] (GB:Q03251;GB:Q94CB0); similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.1); similar to Glycine-rich RNA-binding protein GRP2A (GB:P49311); similar to Glycine-rich RNA-binding protein 10 (GB:Q05966); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Glycine-rich RNA-binding protein 8 (Protein CCR1) (GRP8) [Arabidopsis Thaliana] (GB:Q03251;GB:Q94CB0); similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.1); similar to Glycine-rich RNA-binding protein GRP1A (GB:P49310); similar to Glycine-rich RNA-binding protein (GB:Q03878); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Glycine-rich RNA-binding protein 8 (Protein CCR1) (GRP8) [Arabidopsis Thaliana] (GB:Q03251;GB:Q94CB0); similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.2); similar to Glycine-rich RNA-binding protein 10 (GB:Q05966); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Glycine-rich RNA-binding protein 8 (Protein CCR1) (GRP8) [Arabidopsis Thaliana] (GB:Q03251;GB:Q94CB0); similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.1); similar to Glycine-rich RNA-binding protein 10 (GB:Q05966); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.42357792366164 12.5587069099752 8.13811346782274e-08 0.00126083791956978 11.4059988327215 21.2356505340812 1.42357792366164 0.130734610005553 AT2G39350_at 2.70438969581805 3.52259910400154 4.02546826907402 4.54649336880364 7.08459953120847 6.30022875182601 1.6567082678058 1.91038402988114 4.34186770502217 2.37465512885601 4.61326669200956 3.51807288274882 2.70811434267735 5.29787488785435 4.54936010306767 2.92257215478407 2.72581585406821 3.89885286939021 1.99254923129638 0.274083924239619 0.270230373051196 0.271806944503969 0.270230373051196 0.296245699496202 0.288974511078936 0.285155340141293 0.284048417147938 0.276223714991798 0.278188672467199 0.280591062936673 0.270230373051196 0.273554065721114 0.281651280563429 0.275933402767365 0.274488316680252 0.295366743021126 0.275592337511452 0.290199381192405 2 2 - 16437308 16437812 16437575.727 16437163 16439635 - gene protein_coding_gene FALSE TRUE AT2G39350.1 ABC transporter family protein Identical to White-brown complex homolog protein 1 (WBC1) [Arabidopsis Thaliana] (GB:O80946); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G13580.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G55090.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G53510.1); similar to unnamed protein product [Oryza sativa] (GB:BAA90508.1); similar to stigma/style ABC transporter [Nicotiana tabacum] (GB:AAR06252.1); similar to ABC transporter-like protein [Brassica rapa] (GB:ABB97036.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.95844720372579 12.5359707649516 8.29040485634975e-08 0.00128434952034570 11.3968783855847 7.30999149982727 1.95844720372579 0.220298158948256 AT3G49160_at 3.16541478745356 3.42519089564717 2.776172579723 3.14363935769421 1.48816393581929 1.56163058791653 4.25866175960885 4.26815203104462 2.93259005306667 2.79363572723521 2.77828370810906 1.94417027383586 1.84527408158505 1.89735284032823 2.08496800854610 2.22842563757426 2.20149676190180 2.89977794484816 3.42602237885949 0.232953684925878 0.222845829492033 0.222845829492033 0.226974212500565 0.222845829492033 0.225150941161877 0.230462154054811 0.243382592447913 0.243800854545256 0.230668352841231 0.227728484881696 0.227904587062582 0.223098952003234 0.222845829492033 0.233563603214392 0.222845829492033 0.232958764240362 0.224957995884611 0.229929744112832 3 3|0 -|/ 18233118 18233748 18233481.5 18232979 18235870 - gene protein_coding_gene FALSE TRUE AT3G49160.1 pyruvate kinase family protein similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase family protein [Marinobacter aquaeolei VT8] (GB:ZP_00817592.1); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) -1.17636699122317 -12.5003862071107 8.53500659327535e-08 0.00132215787136428 11.3825408739318 5.6537372636025 -1.17636699122317 0.0789256151239632 AT3G30775_at 5.33619034752402 5.58205080425951 3.9424237308462 3.91853294699338 5.27073642271071 5.19810432505049 6.06615449922078 6.23228884493424 6.0314764314466 3.79899750600294 3.54618747176347 4.14676166697008 3.3389559759152 3.37857769298128 4.09598541196143 4.68573384990067 3.86736354780595 3.59358499135115 4.52146564780408 0.257574861027541 0.257574861027541 0.262323853384210 0.264711911954702 0.263676300451503 0.276802630360201 0.260433154627679 0.257803209433779 0.271632615104939 0.257574861027541 0.25920193122956 0.258388042556934 0.262650661538029 0.259041690820402 0.272648160490124 0.257958867584346 0.264581726352949 0.270638603524094 0.263133245057054 3 3|0 -|/ 12451492 12452107 12451839.4 12451115 12453727 - gene protein_coding_gene FALSE TRUE AT3G30775.1 ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5, PROLINE OXIDASE); proline dehydrogenase Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element. Identical to Proline oxidase, mitochondrial precursor (EC 1.5.99.8) (Osmotic stress-induced proline dehydrogenase) (POX) [Arabidopsis Thaliana] (GB:P92983;GB:P92945;GB:Q96281); similar to proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G38710.1); similar to proline dehydrogenase [Glycine max] (GB:AAR86686.1); contains InterPro domain Proline dehydrogenase; (InterPro:IPR002872) -1.08702890162725 -12.4692509225415 8.75546118743263e-08 0.00135622093793331 11.3699326253532 9.5011220841086 -1.08702890162725 0.0530276811070184 AT1G80050_at 7.30129194850853 7.04599497887093 4.29680457638287 4.37857861838077 5.906211161731 6.28098433099255 7.13470861065374 7.13665082320146 7.06233161449423 7.75812963698257 6.97729585911101 8.403051121587 6.53422997774129 6.14769841849181 7.8902414566143 7.92724534525517 6.14936072511873 7.02374203226853 7.78735664973298 0.227559776468171 0.225307190377146 0.254392316635776 0.257944611684983 0.231231844670002 0.239975161679941 0.226373191337907 0.224791245082922 0.232988889043748 0.239901724283583 0.229286992217053 0.244343867245274 0.2261734276267 0.240042099695345 0.237399476236697 0.233927527521188 0.259785132520442 0.233443221156299 0.256723604838254 1 0|1 /|- 30116632 30117904 30117254.333 30116407 30118217 - gene protein_coding_gene FALSE TRUE AT1G80050.1 APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2); adenine phosphoribosyltransferase Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol. Identical to Adenine phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT 2) (APT2) [Arabidopsis Thaliana] (GB:Q42563;GB:Q39004); similar to APT5 (ADENINE PHOSPHORIBOSYLTRANSFERASE 5), adenine phosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT5G11160.1); similar to Os04g0504000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053244.1); similar to Os02g0613900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047421.1); similar to putative adenine phosphoribosyltransferase form 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD19719.1); contains InterPro domain Adenine phosphoribosyl transferase; (InterPro:IPR005764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836); contains InterPro domain Purine/pyrimidine phosphoribosyl transferase; (InterPro:IPR002375) -1.17167405090832 -12.4172252811752 9.13775539964097e-08 0.00141534693385039 11.3487318133600 13.5189268398036 -1.17167405090832 0.0797408845405297 AT2G30010_at 5.65263836024408 6.12417466178945 2.44226855002694 2.58791064159446 3.14204059202600 3.01023617507376 3.99087791102844 4.41733420922132 7.15720839115285 6.46090908381225 7.63613987059498 7.9411544520421 6.46957655058861 6.71668696976521 7.84489444630943 7.49112777391418 3.53075413246826 6.18219105927438 7.7732285179547 0.316367789537539 0.316367789537539 0.362952921315925 0.344057832882239 0.334160916862586 0.330435937556225 0.317891136896681 0.325959007043312 0.32409996842074 0.316367789537539 0.316367789537539 0.316367789537539 0.31668241793948 0.319386934664752 0.316367789537539 0.316367789537539 0.33904627246575 0.316367789537539 0.316367789537539 2 2 + 12814749 12816254 12815591.364 12812801 12816463 + gene protein_coding_gene FALSE TRUE AT2G30010.1 similar to PMR5 (POWDERY MILDEW RESISTANT 5) [Arabidopsis thaliana] (TAIR:AT5G58600.1); similar to unknown [Pisum sativum] (GB:ABA29157.1); similar to unknown [Pisum sativum] (GB:ABA29158.1); similar to Os03g0290900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049797.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -1.32726265166374 -12.4087222786470 9.20194281966005e-08 0.00142519690390895 11.3452508720097 10.8494422982137 -1.32726265166374 0.115155556394780 AT1G49720_at 9.08659316161576 9.11909429871942 9.15844593295837 9.25994143037526 10.1247947323557 9.55373754118087 7.50506302427614 7.48187842645923 5.89382479690047 6.43035084126566 7.32120932373146 7.20003029168658 7.83156953528068 7.87102597174472 6.53728836230974 6.90197152277995 7.48714141093638 7.40992957241659 5.77811155368002 0.295387269312341 0.295336181009922 0.296462483884003 0.297114068563729 0.299514362069386 0.302515358791101 0.292497327595609 0.29731596379052 0.319061358011926 0.296380440926828 0.291629373765608 0.296477653928483 0.293112607746392 0.291629373765608 0.293060055010549 0.291629373765608 0.31026585184048 0.30458535608929 0.307447221208600 1 1 + 18405089 18405951 18405307.182 18403760 18406296 + gene protein_coding_gene FALSE TRUE AT1G49720.1 ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / transcription factor/ transcriptional activator Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses. similar to ABF4 (ABRE BINDING FACTOR 4), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT3G19290.1); similar to putative ripening-related bZIP protein [Vitis vinifera] (GB:CAB85632.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 1.25599884984765 12.3834242744488 9.39582529076274e-08 0.00145513146278043 11.3348678618368 15.5882518082307 1.25599884984765 0.100610341354518 AT3G11340_at 1.63655057547839 1.86782650094166 6.46138435765828 6.1122805552528 0.97582784578866 1.13010411953137 1.05932006417605 0.707097052025875 1.04615626013231 0.742124427002126 1.02230205361931 1.18834603547833 0.996955637355214 1.04613134792251 0.919334432014795 1.01380613572082 1.32964256679211 1.10844146511308 1.03353890296130 0.240619972803482 0.246555498301059 0.342360642550409 0.351625501390853 0.241642413014702 0.243725820057704 0.242355588602041 0.248084597631897 0.2451763700748 0.252155313194156 0.246952482115107 0.261073587769141 0.240619972803482 0.247237536510989 0.240619972803482 0.241594661822495 0.240619972803482 0.241313205851226 0.249985751256791 3 3 + 3557579 3558099 3557809.818 3556711 3558275 + gene protein_coding_gene FALSE TRUE AT3G11340.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UGT76C2 (UDP-glucosyl transferase 76C2), UDP-glycosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05860.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 1.24485705031120 12.3717879422920 9.4864911629576e-08 0.00146907802149562 11.3300785962486 3.50316212849860 1.24485705031120 0.0983864448423955 AT4G37190_at 6.18821552636506 6.37458941485313 4.47324646911594 4.64636054225441 5.04027996791358 5.32360988632635 5.89031665328792 5.89274980705458 3.08258649437212 4.48669396639855 2.13912712448168 2.38299694497068 2.99867821129731 2.39001663852216 2.74505771903876 2.99250648686714 3.55381246559659 3.04348084257921 3.8260851721392 0.235432445809905 0.226853097712061 0.230735799927690 0.236110582032318 0.228626537744322 0.239670640816504 0.238510857758105 0.237051225827165 0.226853097712061 0.23468715970921 0.231357804044657 0.231914969670076 0.226853097712061 0.241407175917711 0.22866445192309 0.230508730558880 0.243516700939647 0.230428821868206 0.233028660011218 4 4 + 17508910 17509471 17509180.545 17507044 17509741 + gene protein_coding_gene FALSE TRUE AT4G37190.1|AT4G37190.2 similar to Os03g0240900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049512.1); similar to Os12g0586400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067157.1); similar to tubulin-related protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC84426.1)|similar to Os03g0240900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049512.1); similar to Os12g0586400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067157.1); similar to tubulin-related protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC84426.1); contains domain FAMILY NOT NAMED (PTHR13391); contains domain Tubulin/Dihydroxyacetone kinase nucleotide-binding domain (SSF52490); contains domain gb def: Tubulin-like protein (PTHR13391:SF4) -1.11666964539418 -12.3600308168734 9.57906398825325e-08 0.00148331805858102 11.3252310217271 8.76825341596594 -1.11666964539418 0.0658939513109624 AT4G25100_at 11.8629879330831 11.9504330727010 11.1311118881557 11.1435825016195 11.1050174481880 11.1817084646165 12.7852961378684 12.9843059833402 12.5097533284049 12.6542786020662 11.2273932381746 12.0044222907478 12.0687291574543 11.6372952629941 9.43685728063295 11.6397573056278 12.2013779335354 11.8353586052090 11.8596121881683 0.0766577561029613 0.075404832816657 0.0754700628589142 0.0769270654217318 0.0754855076689146 0.0795953504102223 0.0761353766185659 0.0770784451283419 0.082796086108669 0.0766583613506933 0.0774230266116883 0.0760875861859644 0.0765615601233328 0.0779555740997201 0.0861130697572772 0.0753017383277127 0.0765631004464494 0.0783302668438094 0.0753017383277127 4 0|4 /|- 12884677 12885605 12885283 12884310 12886831 - gene protein_coding_gene FALSE TRUE AT4G25100.1|AT4G25100.2|AT4G25100.3|AT4G25100.4 FSD1 (FE SUPEROXIDE DISMUTASE 1); iron superoxide dismutase Fe-superoxide dismutase Identical to Superoxide dismutase [Fe], chloroplast precursor (EC 1.15.1.1) (SODB) [Arabidopsis Thaliana] (GB:P21276;GB:Q9FE21;GB:Q9SW16); similar to FSD2 (FE SUPEROXIDE DISMUTASE 2), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT5G51100.1); similar to Fe-superoxide dismutase (GB:AAA32791.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) -1.0451082640097 -12.3573282532874 9.6004817127918e-08 0.00148653858840868 11.3241155062695 23.6918622239516 -1.0451082640097 0.0399484984608692 AT1G73800_at 9.14991966088855 9.1343265880825 9.87621757751097 9.90814442824214 8.5297771295584 8.13382184769722 3.36979906859477 3.62796642373175 6.66636367132717 4.1853094700692 4.16916258045704 4.17970583250392 4.06319787176865 4.68310734127723 4.27926257613541 5.03125369818213 4.95861761993127 5.5873761328684 4.34006040141749 0.268571997632468 0.262696878879735 0.26751643977952 0.269605122309692 0.270019308395849 0.257657640875268 0.271608920617212 0.258294137861792 0.279600230029576 0.255931752354607 0.255923977063435 0.263891363956898 0.259094671205922 0.258885959264427 0.261976542879911 0.25843285554036 0.273143627940223 0.266115872043444 0.272070852832054 1 1|0 -|/ 27749438 27750291 27749984.714 27749109 27750369 - gene protein_coding_gene FALSE TRUE AT1G73800.1 calmodulin-binding protein similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT5G57580.1); similar to At1g73800/F25P22_22 [Medicago truncatula] (GB:ABE78902.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 1.17326829306517 12.3400971461011 9.73826643058235e-08 0.00150777579144706 11.3169923923337 12.5576824093275 1.17326829306517 0.0820310935142531 AT1G67970_at 9.01230214439158 9.51052994377904 9.91433444957766 9.77439405049632 10.0070510150380 9.48236211284903 6.83470561387401 6.51844258784876 5.3136314948219 4.84237719296474 5.5456738237524 5.63814716240622 5.88999364845541 6.48738932338595 5.5100392494191 5.69307571434081 6.4800203817643 5.77138743094227 4.31643183173119 0.209802929487422 0.215290668876886 0.216917267730732 0.212104779545674 0.226929283180211 0.222080310852279 0.220410540274998 0.215752865203668 0.228876958943481 0.216900709323936 0.218487246933597 0.209802929487422 0.209802929487422 0.21212769007672 0.212886630861098 0.209802929487422 0.236367089392316 0.211955355484485 0.209802929487422 1 1 - 25488515 25489062 25488797.727 25488362 25490125 - gene protein_coding_gene FALSE TRUE AT1G67970.1 AT-HSFA8 (Arabidopsis thaliana heat shock transcription factor A8); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-8 (AtHsfA8) (Heat shock factor protein 5) (HSF 5) (Heat shock transcription factor 5) (HSTF 5) (HSFA8) [Arabidopsis Thaliana] (GB:Q9S7U5); similar to HSF1 (ARABIDOPSIS HEAT SHOCK FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17750.1); similar to heat shock factor protein hsf8-related [Glycine max] (GB:AAS15800.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.43917966824296 12.3198441195354 9.9029666526197e-08 0.00153317729715858 11.3085961991119 14.2323215805556 1.43917966824296 0.138782395922581 AT1G22530_at 7.64526546039754 7.6132727125216 7.90988835133595 7.87102408816686 8.66832285128002 8.27966521780847 5.34258109564018 5.4320197429506 8.71892591083637 6.76434452773238 9.9039246490907 7.72703737275106 8.73609318569879 8.96873571047285 8.61574487443642 7.40418069059294 6.50383380425962 8.43740369539475 7.66061184152454 0.176758970134016 0.170262720150673 0.171621021944296 0.179397861009756 0.170424425546159 0.180090545840473 0.200049910635683 0.189286469523897 0.174914203430380 0.180427984051414 0.179536603006771 0.168744461403875 0.171478494929786 0.172348640926772 0.172019614380044 0.171238699761888 0.189106668057072 0.1790910285937 0.169252812962673 1 1|0 -|/ 7955772 7956816 7956200.2 7955482 7958431 - gene protein_coding_gene FALSE TRUE AT1G22530.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein Identical to Patellin-2 (PATL2) [Arabidopsis Thaliana] (GB:Q56ZI2;GB:Q9SK94); similar to PATL1 (PATELLIN 1), transporter [Arabidopsis thaliana] (TAIR:AT1G72150.1); similar to putative cytosolic factor [Trifolium pratense] (GB:BAE71201.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain GOLD; (InterPro:IPR009038); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071) 1.12321609770486 12.2955845888742 1.01042408535094e-07 0.00156423752653178 11.2985049896731 15.3461282772801 1.12321609770486 0.0695645297211114 AT3G06770_at 4.58957012217591 5.21398314243638 3.32721190835525 2.81414500387417 3.39064078941312 3.56209663011845 6.91241128511308 6.98865388803737 7.70203593248025 7.2821118935509 8.6313172666123 8.2878178218012 7.41447717776302 8.05582238834536 8.63441137385202 6.732932023541 5.17281342790168 7.13279169264275 8.34859525135073 0.266900145689675 0.260373839268389 0.271960895329906 0.276683037590642 0.271264325447474 0.268915040667519 0.262259477815128 0.263031482399701 0.268040140127494 0.26078528162744 0.268609509006864 0.260286069235399 0.268443621237364 0.263157208756322 0.271079956402808 0.265577139905746 0.276736058996839 0.261834576328249 0.260225325018322 3 3 - 2135172 2135692 2135427.818 2134806 2137234 - gene protein_coding_gene FALSE TRUE AT3G06770.1|AT3G06770.2|AT3G06770.3 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to polygalacturonase [Arabidopsis thaliana] (TAIR:AT5G49215.2); similar to Os11g0658800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068399.1); similar to polygalacturonase-like protein-like [Solanum tuberosum] (GB:ABB55373.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334)|similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT5G49215.1); similar to Os11g0658800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068399.1); similar to polygalacturonase-like protein-like [Solanum tuberosum] (GB:ABB55373.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -1.46120707786849 -12.2863815638582 1.01817542128417e-07 0.0015761355521479 11.2946670731761 12.2425285573662 -1.46120707786849 0.143576907053620 AT1G02450_at 4.90696886911662 5.71988345705504 8.59674943322989 8.75258578078387 3.83792136040056 3.57580450312561 1.93824968664139 1.86268856876188 3.17060611451734 2.27509404404033 3.11814039385028 3.05570969607091 2.23959290242327 2.71152467108358 2.53713997279806 3.01822938479929 2.91908707606502 3.73483633125989 2.05817874297484 0.302768982304595 0.325379683219158 0.326656715392922 0.333714012326503 0.305629545744037 0.292485784929042 0.292577549250261 0.2990103982531 0.293320872826467 0.297481047258745 0.299680972795605 0.304292867017788 0.305654366554772 0.292761184426673 0.297577248536823 0.292485784929042 0.296604918990433 0.297040574370961 0.30260657100781 1 1 - 498057 498391 498207.091 497976 498516 - gene protein_coding_gene FALSE TRUE AT1G02450.1 NIMIN-1/NIMIN1; protein binding NIMIN1 modulates PR gene expression according the following model: NPR1 forms a ternary complex with NIMIN1 and TGA factors upon SAR induction that binds to a positive regulatory cis-element of the PR-1 promoter, termed LS7. This leads to PR-1 gene induction. NIMIN1 decreases transcriptional activation, possibly through its EAR motif, which results in fine-tuning of PR-1 gene expression. similar to systemic acquired resistance (SAR) regulator protein NIMIN-1-related [Arabidopsis thaliana] (TAIR:AT4G01895.1) 1.49965360517877 12.2741744502187 1.02855676851688e-07 0.00159210302198727 11.2895680758676 7.60789421775 1.49965360517877 0.150818884335331 AT4G31590_at 3.70167356106221 4.07028088498077 1.97531279862068 1.95670067266431 2.76841931241026 2.59728756745038 6.02842098198236 6.142407869366 3.80484065736092 5.34938621519602 5.84589569213002 6.89097800012918 5.24090522456279 5.06609031224215 6.15332910287604 5.34742821318234 3.70003167946595 4.91385316135095 5.84562539535788 0.256162519785676 0.254181226835693 0.268284565190913 0.266008636209283 0.254181226835693 0.262148944781113 0.257185295940655 0.264637252540315 0.258026166324881 0.263778244350842 0.258114790844966 0.258399146052885 0.256810906728094 0.259656494508091 0.259015302337076 0.254181226835693 0.26823111140132 0.262242374729755 0.261855252937975 4 4 - 15309948 15310438 15310246.273 15309512 15312597 - gene protein_coding_gene FALSE TRUE AT4G31590.1 ATCSLC05 (Cellulose synthase-like C5); transferase, transferring glycosyl groups encodes a gene similar to cellulose synthase similar to ATCSLC08 (Cellulose synthase-like C8), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G24630.1); similar to ATCSLC12 (Cellulose synthase-like C12), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G07960.1); similar to ATCSLC04 (Cellulose synthase-like C4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G28180.1); similar to putative glucosyltransferase [Cicer arietinum] (GB:CAB88664.1); similar to TPA: TPA_exp: cellulose synthase-like C3 [Oryza sativa (japonica cultivar-group)] (GB:DAA01751.1); similar to TPA: TPA_exp: cellulose synthase-like C2 [Oryza sativa (indica cultivar-group)] (GB:DAA01750.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) -1.13320128464530 -12.2688054482954 1.03315909580251e-07 0.00159912364848313 11.2873224070227 8.85244529567414 -1.13320128464530 0.0731136713756039 AT3G05880_at 11.3913337556757 11.6121748666851 11.1160507065183 11.1568961960746 11.7351562225979 11.5577431978354 9.86784994966741 9.91782111091674 10.3729639297376 9.6966155325426 11.7520495088893 11.4179104862943 11.3774206637474 11.2197348097826 11.8226646651713 11.2391293489790 11.1843338818017 11.1968752280574 9.84994485832152 0.0919536939119945 0.0911554550274076 0.0933289718656885 0.0914299630082741 0.0914567690037074 0.0923217627024285 0.0979476351384445 0.0997251036205337 0.0946811236503648 0.0993870225149894 0.0914998680179808 0.0911554550274076 0.0926693271099759 0.0962659595875851 0.0977410116915525 0.0915264447711011 0.0988671192047783 0.0950363240826998 0.101350820944642 3 3|0 -|/ 1756201 1756474 1756304.333 1755503 1756546 - gene protein_coding_gene FALSE TRUE AT3G05880.1 RCI2A (RARE-COLD-INDUCIBLE 2A) Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains. Identical to Hydrophobic protein RCI2A (Low temperature and salt-responsive protein LTI6A) (RCI2A) [Arabidopsis Thaliana] (GB:Q9ZNQ7); similar to RCI2B (RARE-COLD-INDUCIBLE 2B) [Arabidopsis thaliana] (TAIR:AT3G05890.1); similar to Protein of unknown function UPF0057 [Medicago truncatula] (GB:ABD33197.1); contains InterPro domain Protein of unknown function UPF0057; (InterPro:IPR000612) 1.0611283552884 12.2566196101026 1.04368802810447e-07 0.00161531596109729 11.2822186795859 21.7315980495585 1.0611283552884 0.0502787531587181 AT3G15400_at 3.19558942656399 3.28873829749023 2.52296816074502 2.17702082209159 2.26607566119325 2.15650847788728 3.91273624934642 4.88213118366189 3.50762353798510 4.77068433583944 2.68562500342572 2.52113203684274 2.49826803656049 2.50809272933807 2.28604878304252 2.12964599236914 2.57110191928398 2.21368774448163 4.35326188960261 0.214391661806865 0.209825301305466 0.211201568500577 0.212724917297622 0.214017223671047 0.209825301305466 0.216915910033591 0.220595999734268 0.219733959295031 0.227971193996705 0.215789822324150 0.212166567852126 0.211049386246034 0.224519552702838 0.21239454674766 0.214069086879111 0.220028926024766 0.212407296488516 0.223318410933460 3 3 + 5202535 5202907 5202733.182 5201651 5203204 + gene protein_coding_gene FALSE TRUE AT3G15400.1|AT3G15400.2 ATA20 (Arabidopsis thaliana anther 20) Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to Os05g0226800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054964.1); similar to ovarian fibroin-like substance-1 [Cyprinus carpio] (GB:AAG25716.1) -1.66148924129701 -12.2297614633158 1.06730801103088e-07 0.00165176587787139 11.2709363563067 6.36883280244434 -1.66148924129701 0.179850990590697 AT1G01640_at 3.35672905287300 3.61188174527067 4.90343050740174 4.79529006322689 5.36779268199876 4.80055776467167 2.06247954424452 2.11803209208207 3.04565466544445 2.18972712130359 2.44787256404169 2.29252745287615 2.67885085990074 3.06752768549232 2.94210067083177 2.74668555239260 3.70398979141863 3.02692860537552 2.20554280018298 0.235184464382599 0.235184464382599 0.260924794092435 0.250255005573193 0.263018109994516 0.261350412958455 0.235184464382599 0.235184464382599 0.246821031028307 0.24513141537582 0.236278393102151 0.238931778428261 0.236195770403861 0.235654161702408 0.240709048596268 0.237478505392746 0.249241518824285 0.236104542666041 0.243404507044682 1 0|1 /|- 231171 231582 231383.5 230994 232506 - gene protein_coding_gene FALSE TRUE AT1G01640.1|AT1G01640.2 speckle-type POZ protein-related similar to speckle-type POZ protein-related [Arabidopsis thaliana] (TAIR:AT3G56230.1); similar to BTB/POZ [Medicago truncatula] (GB:ABE86049.1); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 1.28124467392735 12.2229765771694 1.07336628477966e-07 0.00166103432569652 11.2680789174143 6.54883347818859 1.28124467392735 0.109673355863583 AT1G07720_at 6.59727074032285 6.82295150939224 8.55932662654806 8.7466808788802 8.88552015762906 9.018171623971 8.34902638665881 8.7711253999425 7.54571793907202 7.44587058922156 9.20561244733434 8.58356796180705 9.11146386026781 9.09233683309565 8.09003023609093 8.29148089261874 8.74577670977765 8.49366798710525 7.42267038889243 0.139940343665929 0.140669441053515 0.136923073793476 0.138360260869024 0.135301976510884 0.137253087708849 0.135725141696935 0.139105672054125 0.140265425632568 0.143298676924986 0.141236451939486 0.134799525355777 0.135307598725903 0.143811881012751 0.141792163121231 0.134799525355777 0.139676164002524 0.135414762416746 0.149471524259946 1 1 - 2391163 2391542 2391381.091 2390652 2392450 - gene protein_coding_gene FALSE TRUE AT1G07720.1 beta-ketoacyl-CoA synthase family protein Identical to 3-ketoacyl-CoA synthase 3 (EC 2.3.1.-) (KCS-3) (Very-long-chain fatty acid condensing enzyme 3) (VLCFA condensing enzyme 3) (KCS3) [Arabidopsis Thaliana] (GB:Q9LQP8); similar to beta-ketoacyl-CoA synthase family protein [Arabidopsis thaliana] (TAIR:AT2G28630.1); similar to 3-ketoacyl-CoA synthase 3 (KCS-3) (Very-long-chain fatty acid condensing enzyme 3) (VLCFA condensing enzyme 3) (GB:Q9LQP8); similar to Chalcone and stilbene synthases, N-terminal [Medicago truncatula] (GB:ABE84281.1); similar to Chalcone and stilbene synthases, N-terminal [Medicago truncatula] (GB:ABE80003.1); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; (InterPro:IPR013747); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392) 1.19882689481408 12.1920948319399 1.10141652654384e-07 0.00170433193317394 11.2550357668761 16.3053400429552 1.19882689481408 0.0918653659946456 AT1G48570_at 6.63453805665542 6.73999853091554 6.09253730752031 5.81328280780445 4.95126679048738 4.89242222480127 7.11832671470187 6.75773429958438 4.65836427342527 5.37692389255785 3.89223129556184 3.96538491809658 3.66338611175236 3.71232248088638 4.19282760401239 4.46901106809005 4.73961964278361 4.36698290080844 5.15766146500956 0.250807905089328 0.248737072476651 0.245826482416751 0.246097534448813 0.245826482416751 0.245826482416751 0.264729708832291 0.255723151126396 0.2581199980377 0.250319995038428 0.250372178128624 0.245826482416751 0.246804082618121 0.24669588181256 0.248597861930957 0.245826482416751 0.249672449596944 0.246545824781107 0.249370440574401 1 1|0 -|/ 17959127 17960357 17959793.444 17958946 17961387 - gene protein_coding_gene FALSE TRUE AT1G48570.1 zinc finger (Ran-binding) family protein similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT1G70650.1); similar to Zinc finger, RanBP2-type [Medicago truncatula] (GB:ABE26599.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) -1.15718395436311 -12.1865118033734 1.10657209494793e-07 0.00171219900251293 11.2526711719877 10.7197819897654 -1.15718395436311 0.0816470656738313 AT3G12610_at 7.22692068465374 7.8234753550959 3.54176765664347 3.60534481092580 6.24498455298851 6.25491240179004 7.89279037882412 8.08688980236647 7.58972549139599 7.54463525224499 8.77901404617336 8.91113561015958 8.24976665423373 8.12777742628307 9.157847464723 7.8890234714161 6.11807303770552 7.95516752251121 8.42141275375608 0.197707637435093 0.198421390832853 0.227603032986361 0.213066269240046 0.206981584479455 0.216053986607546 0.197707637435093 0.207945504186052 0.223154851750595 0.204149873513528 0.198531465481634 0.200622708904147 0.197707637435093 0.197943954418979 0.213229081133203 0.206464348690611 0.215735918071898 0.203188270657507 0.200178269354747 3 3 - 4006715 4007231 4006966.727 4006406 4007814 - gene protein_coding_gene FALSE TRUE AT3G12610.1 DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100); protein binding Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes. Identical to DNA-damage-repair/toleration protein DRT100 precursor (DRT100) [Arabidopsis Thaliana] (GB:Q00874;GB:Q9LHK0); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G20820.1); similar to leucine rich repeat protein [Cicer arietinum] (GB:CAE76632.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.27460777231488 -12.1837708359791 1.10911278709583e-07 0.00171601930419466 11.2515095460750 14.3348357820525 -1.27460777231488 0.109133254202961 AT1G64890_at 7.47529587245002 7.83217944306456 6.71099642480829 6.47126284764878 7.13652483509917 7.18413684595242 4.73403313930767 4.98599638282743 3.71299668033946 3.45059171603605 5.01938785508289 5.24620943792064 5.30509219041564 5.49050236566707 5.36577891286104 4.22324051324269 5.45579261885682 5.70374747860366 3.31667328105546 0.273757459177909 0.264814021101276 0.268607217012676 0.276791727612245 0.259569693479967 0.264361728754334 0.259933145179714 0.259569693479967 0.279070724310764 0.273939022813684 0.263758190584609 0.259642459465846 0.268453340836863 0.267805440215193 0.268304020591061 0.262530781252222 0.265792978047738 0.264564934541877 0.271157108964221 1 1 + 24114233 24114754 24114575.091 24113205 24115063 + gene protein_coding_gene FALSE TRUE AT1G64890.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G04570.1); similar to Biopterin transport-related protein BT1 [Crocosphaera watsonii WH 8501] (GB:ZP_00518975.1); similar to Os05g0389400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055433.1); similar to Os03g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051544.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 1.17582619570120 12.1764753991499 1.11590608206311e-07 0.00172641829955984 11.2484153629924 10.9261229642573 1.17582619570120 0.0866294518837063 AT4G22560_at 3.56244555664228 3.43260194441988 2.53757784297722 2.85598165040805 2.56507933147641 2.47218742635097 4.14871230434000 4.55671744703064 4.38288277177165 4.80155743066664 3.94945221448862 5.06503841846017 3.78674905166061 3.61980977450267 4.65697431916954 3.43931984985402 2.77410921081058 3.36706353925388 5.58542360074288 0.263592449553397 0.272588885999712 0.269102085567292 0.261083480028644 0.264037987386255 0.27344035604301 0.273445550687883 0.268690622842928 0.273831076906013 0.26858445853841 0.277499757543114 0.264271168488788 0.267470393466771 0.262086644895066 0.261083480028644 0.261083480028644 0.266802003600552 0.263713350870353 0.288494884946167 4 4 + 11880423 11880926 11880681.455 11880130 11881083 + gene protein_coding_gene FALSE TRUE AT4G22560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G12450.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25627.1); contains domain ADP-ribosylation (SSF56399) -1.20419306871188 -12.1669911735572 1.12480513863984e-07 0.00174007354947583 11.2443877085739 7.64421417879005 -1.20419306871188 0.0937275067918285 AT1G17460_at 3.11962572530192 3.31590223145516 4.01461434151444 4.14164705362293 3.93160080253578 3.93783292066066 1.4693433795042 1.58968222884813 1.14914427741281 1.52449993225997 1.76594534288277 1.30953810070953 1.89068339087951 1.52749872419102 2.15385982202874 1.76151409586462 2.65257700424797 1.91965696888284 1.61459271070614 0.240542719734362 0.237598997951555 0.241798594315082 0.241177674426778 0.249965351903432 0.245311543508063 0.238786928897413 0.248051481812908 0.256014027148737 0.238971168031715 0.236460009755014 0.236703062708945 0.238654245128924 0.240513795923099 0.243770047118071 0.236460009755014 0.241445227208483 0.240923108518996 0.23695606757514 1 1 + 6001571 6002464 6002030.455 5998807 6002709 + gene protein_coding_gene FALSE TRUE AT1G17460.1 TRFL3 (TRF-LIKE 3); DNA binding / transcription factor Arabidopsis thaliana myb family transcription factor (At1g17460) similar to TRFL6 (TRF-LIKE 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G72650.2); similar to Os02g0776700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048286.1); similar to MYB transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD16962.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.03801613136200 12.1260515211667 1.16411282984753e-07 0.00180076613649115 11.2269348882326 4.84106682943233 1.03801613136200 0.0455176714157677 AT2G30420_at 5.31190330831412 6.03127143466467 2.99330992207578 2.98011574854536 3.83581494823430 3.78968226263967 5.96071594044243 6.05856132377919 5.24514868801816 5.69919838887216 5.48668104672357 6.01629412072077 6.21505649816747 6.01373840621005 4.73742777681669 5.65230348346594 4.35242094803886 4.48603130856828 5.94019123622636 0.304100000527957 0.295093057106842 0.296442642600576 0.301283694703042 0.29222120331302 0.309003496211649 0.29222120331302 0.29222120331302 0.310742004558349 0.297468521973754 0.293921986990112 0.29222120331302 0.298318513174739 0.29222120331302 0.29222120331302 0.302952402328723 0.306424143491833 0.30347612064476 0.299225522698995 2 2 - 12968060 12968968 12968589.75 12967961 12969239 - gene protein_coding_gene FALSE TRUE AT2G30420.1 myb family transcription factor similar to TRY (TRIPTYCHON), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G53200.1); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT2G30432.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61200.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.34953376027147 -12.1221254311974 1.16796006635858e-07 0.00180660063064346 11.2252554343948 10.1192586792342 -1.34953376027147 0.125910383848375 AT2G15890_at 12.3558363706414 12.3547668343197 12.2827278313599 12.2200828141523 13.0637264291325 12.8631638120455 10.8216632829806 10.6279689098550 10.1617691303870 10.2017275148385 11.3452042167565 10.689693681789 11.3765783111260 11.4340482444355 10.7639678968029 10.9355184840764 11.8079613814114 11.1752666621088 10.1340309679131 0.0813094889967872 0.079516310821923 0.0806534594355598 0.0799244782221472 0.0880594866627804 0.0808898165769584 0.081277565757378 0.079516310821923 0.0947311992015397 0.0858808442224421 0.0827802276132245 0.079828267280618 0.0833521242466852 0.0797893354652237 0.082914928675986 0.079516310821923 0.079516310821923 0.0822251768471122 0.085040308602933 2 2|0 -|/ 6928307 6929014 6928787.6 6927451 6929107 - gene protein_coding_gene FALSE TRUE AT2G15890.1|AT2G15890.2 MEE14 (maternal effect embryo arrest 14) similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP50944.1) 1.04627684716191 12.1094970124516 1.18042875709712e-07 0.00182576915860212 11.2198465732846 22.7521782343239 1.04627684716191 0.0494550190167839 AT4G18580_at 6.769472043278 6.49322763945962 8.18782145775964 8.20590907415575 8.33340624512732 7.69472541120394 5.33316331728164 5.41487259333359 4.99754707107962 4.91774086015222 5.25104233232183 4.48486132978794 5.45267536281708 5.66994094176018 4.83976598199377 6.22861359816316 6.18453657299839 5.30945449264928 4.72950759167058 0.283799225608219 0.283747190771379 0.295336277557505 0.289510850894233 0.296877676188872 0.289913250657277 0.283747190771379 0.283918552497460 0.292244055083805 0.286776343488355 0.283747190771379 0.288729696309309 0.288004702002757 0.285699041046424 0.290770537934548 0.283747190771379 0.287854999543732 0.283747190771379 0.288651346621112 4 4|0 -|/ 10234911 10235509 10235256.111 10234678 10236056 - gene protein_coding_gene FALSE TRUE AT4G18580.1|AT4G18580.2 unknown protein 1.32439723382538 12.1031149029374 1.18678505490650e-07 0.00183548176591839 11.2171090892099 12.2086796397977 1.32439723382538 0.121289931977979 AT4G17695_at 5.69263368056699 6.51306295154201 7.25993633343563 7.15117400329155 8.12563024267573 7.17196742828735 4.35366158960381 4.40126076556994 2.96733083083905 2.96978299166016 4.31560648751328 4.47950314533901 4.60615187314955 5.31200363576348 3.56400779160197 4.70732385337077 4.82662725830701 4.7579984245675 3.08018804340509 0.249642420262662 0.247758957311020 0.2509067145616 0.249360294929914 0.251306364120898 0.251901615137286 0.242673181228124 0.242179236712801 0.251091959602729 0.24314056752293 0.245497794446308 0.242352918004098 0.246200401458783 0.248780758181746 0.250861735616712 0.241598748357192 0.241598748357192 0.241598748357192 0.241598748357192 4 4|0 -|/ 9848158 9850307 9849486.222 9848142 9850717 - gene protein_coding_gene FALSE TRUE AT4G17695.1 KAN3 (KANADI 3); DNA binding / transcription factor similar to KAN2 (KANADI 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32240.1); similar to myb family transcription factor [Brassica oleracea] (GB:ABD65609.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.87620388758434 12.0746611410964 1.21557940348494e-07 0.00187989354748947 11.2048718544768 10.1221259230398 1.87620388758434 0.218670977391298 AT2G40300_at 6.55656783160109 6.37348613331707 5.5906682477811 5.48619329146287 3.17427565957818 3.64285071346817 6.46539092197417 6.82162330070254 3.59528662389429 3.63148034396837 3.78821763032149 3.10249314292067 3.11050873045787 2.7865770222059 3.13796205392025 2.91199807749632 3.19717138741225 3.77313789979197 3.76174631639389 0.284164175050979 0.297991512556927 0.291109085530576 0.288140704804007 0.281269483252465 0.295126748128655 0.292692525863384 0.289045286899946 0.289221640324903 0.283295655660151 0.282366165811349 0.281269483252465 0.292682301721727 0.292657897078260 0.300216062571892 0.281269483252465 0.285581130217712 0.282536718552856 0.282006402253502 2 2|0 -|/ 16838768 16840087 16839762.556 16838375 16840358 - gene protein_coding_gene FALSE TRUE AT2G40300.1 ATFER4 (FERRITIN 4); ferric iron binding Identical to Ferritin-4, chloroplast precursor (EC 1.16.3.1) (FER4) [Arabidopsis Thaliana] (GB:Q9S756;GB:Q8WHW5); similar to ATFER3 (FERRITIN 3), ferric iron binding [Arabidopsis thaliana] (TAIR:AT3G56090.1); similar to ferritin [Chorispora bungeana] (GB:ABB22752.1); contains InterPro domain Ferritin-related; (InterPro:IPR012347); contains InterPro domain Ferritin; (InterPro:IPR001519); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078); contains InterPro domain Ferritin-like; (InterPro:IPR009040); contains InterPro domain Ferritin and Dps; (InterPro:IPR008331) -1.25879979358957 -12.0739978328754 1.21625963407634e-07 0.00188082389813565 11.2045859472707 8.958305014728 -1.25879979358957 0.1081969552911 AT1G69930_at 2.69616646849471 2.63927214339083 6.30309085828124 6.78138469396333 2.44889427228856 2.22709397549794 0.963651215280547 0.965561344248808 1.29547213842887 1.18838548561483 0.592533012813951 0.996177199542614 0.961055029465737 0.713479049377336 0.79601370087306 1.09968846447463 0.432062728359030 1.04886437094506 0.757261672751692 0.252873043751876 0.257149862962114 0.275633054350055 0.284781980564162 0.261383998143070 0.248719204205542 0.246453940726587 0.248807270751045 0.252555289529704 0.262124022085087 0.247954478394027 0.246453940726587 0.253346905278022 0.248170582504379 0.252492377328671 0.246453940726587 0.262193084729718 0.247820696812546 0.259194015079524 1 1 - 26341417 26342167 26341781.364 26341160 26342458 - gene protein_coding_gene FALSE TRUE AT1G69930.1 ATGSTU11 (Arabidopsis thaliana Glutathione S-transferase (class tau) 11); glutathione transferase Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G27130.1); similar to glutathione S-transferase [Gossypium hirsutum] (GB:AAF29773.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.18678212635184 12.0736998555223 1.21656534796530e-07 0.00188117499755874 11.2044574999957 4.08331801813735 1.18678212635184 0.0917680960226972 AT3G46670_at 4.68706320067925 4.76639554754012 4.13197644891862 3.8927382980885 4.14376388287347 4.29430364310937 7.38419770099311 7.30143265275676 6.37316671206242 7.10635758306197 6.31651129973382 6.84933224883581 6.37850911774846 6.27242379081244 6.86757181166812 6.71506425089857 5.80697597978979 6.61758554946275 6.50175588837711 0.207758267968935 0.205864684462567 0.218821037649578 0.212059490339630 0.205041119811089 0.206827490093916 0.214774101715592 0.213283101594064 0.211852407659313 0.20768995778281 0.209083009848964 0.205763891112033 0.203569883397603 0.213383078478566 0.204907037865036 0.206834689639795 0.205838676091198 0.203569883397603 0.203569883397603 3 3 - 17203792 17204322 17204104.455 17203574 17205382 - gene protein_coding_gene FALSE TRUE AT3G46670.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT3G46660.1); similar to glucuronosyl transferase homolog, ripening-related - tomato (fragment) (GB:S39507); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.05075333947997 -12.0605929980306 1.23009539625388e-07 0.00190197350168775 11.1988018126141 11.6444456638462 -1.05075333947997 0.0527861508965054 AT1G04990_at 5.93112503180028 5.47277831832562 6.12417702819093 6.02732706223458 5.57736423540485 5.20994572832081 4.06369778793951 3.81145590235203 3.28357232244503 3.82478256702284 5.28260060838963 5.15502183488117 4.54585212026542 5.21349186612415 5.49861846370891 4.79054390421795 5.01214017205571 4.84287051300332 3.13054321076819 0.242205202767924 0.250172418743138 0.248524394038158 0.250033793496453 0.248429643277907 0.247148845066042 0.239567423289479 0.242303298599330 0.255567690419619 0.259080000633559 0.241106044194316 0.23658014195485 0.245568918446471 0.239189319373726 0.238621180564899 0.247634043860654 0.23658014195485 0.240715441721331 0.237272815502477 1 0|1 /|- 1419367 1419978 1419719.444 1419079 1421788 - gene protein_coding_gene FALSE TRUE AT1G04990.1|AT1G04990.2 zinc finger (CCCH-type) family protein Identical to Zinc finger CCCH domain-containing protein ZFN-like 4 [Arabidopsis Thaliana] (GB:Q94AD9;GB:Q9MAU8); similar to ZFN2 (ZINC FINGER PROTEIN 2), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G32930.1); similar to Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] (GB:ABD28369.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.2723078276761 12.0389415578969 1.2528050939494e-07 0.00193696195575517 11.1894342147244 9.50503812119248 1.2723078276761 0.111896127768619 AT1G78410_at 6.5238197275314 6.26055323968177 8.12993094786902 8.63929576782228 5.73271110789492 5.54628955535747 2.88421883722238 2.79999797654951 3.51954520578439 2.87057392646854 2.8093924051159 3.58921417910254 2.64299149423281 2.81699493832174 3.01216041659622 2.55415028392702 3.47676337289329 3.28714792340673 2.41369759522905 0.34964543908379 0.365597508088442 0.37951908081787 0.371946698763689 0.367465111927602 0.35378443200602 0.33680487213666 0.330570503738011 0.330570503738011 0.332091336800312 0.330570503738011 0.330570503738011 0.330570503738011 0.332829632228499 0.331058688481976 0.330570503738011 0.335774990052081 0.330570503738011 0.333938368438404 1 1 + 29507631 29507900 29507755 29507475 29508134 + gene protein_coding_gene FALSE TRUE AT1G78410.1 VQ motif-containing protein similar to Avr9/Cf-9 rapidly elicited protein 169 [Nicotiana tabacum] (GB:AAG43552.1); contains InterPro domain VQ; (InterPro:IPR008889) 1.24195285018093 12.0367308740533 1.25514931470823e-07 0.00194046084053892 11.1884760046401 8.79370587125452 1.24195285018093 0.105351482505896 AT2G29460_at 4.24926869176194 4.85844156005178 7.43127042679419 7.33376092784622 4.34409884531106 3.97936431641941 1.83541820605773 1.67133593403457 1.79466488329158 1.69946765936818 1.73014851220266 1.73940562567400 1.95365569394084 1.54169231011485 1.51245605542404 1.57253214828969 2.31880777167277 1.84838773415619 1.64323357364343 0.347006685872141 0.341989480373625 0.36251065998579 0.356493482096144 0.327751648164174 0.330698094771914 0.314030924565187 0.318911840632797 0.312844319868716 0.311704778811438 0.312404552813823 0.317767137865657 0.320875982179659 0.316113234501784 0.319261650893885 0.311704778811438 0.312102256644518 0.317580713364346 0.31311983258062 2 2|0 -|/ 12633819 12634568 12634131.6 12633624 12634755 - gene protein_coding_gene FALSE TRUE AT2G29460.1 ATGSTU4 (GLUTATHIONE S-TRANSFERASE 22); glutathione transferase Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTU1 (GLUTATHIONE S-TRANSFERASE 19), glutathione transferase [Arabidopsis thaliana] (TAIR:AT2G29490.1); similar to ATGSTU2 (GLUTATHIONE S-TRANSFERASE 20), glutathione transferase [Arabidopsis thaliana] (TAIR:AT2G29480.1); similar to glutathione S-transferase GST 13 [Glycine max] (GB:AAG34803.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.34159394522476 11.9913721560884 1.30431448927035e-07 0.00201633976896304 11.1687437257773 6.20766541530233 1.34159394522476 0.127233897921574 AT3G16650_at 3.70392171576312 3.69001960451109 4.95789441477016 5.06849017221081 4.94133028429884 5.13298041854261 3.33956831907032 3.48579859153258 3.59203009681109 4.02319138911385 4.36197307741742 4.40528376909469 4.60076964494243 4.16988488926016 4.56499193067179 4.65107363973178 4.78094427182695 4.1439169136836 4.02667328083889 0.202283661489373 0.195308932460821 0.204785649626399 0.200340318632580 0.202404150519604 0.197357145237955 0.194871568829131 0.198223985081363 0.198229346420197 0.199255353649150 0.19275747565467 0.196252434952857 0.197515690941266 0.200020389605924 0.196510797729265 0.203216189649812 0.193519980813146 0.196337038309241 0.193256145556063 3 3|0 +|/ 5673735 5675047 5674438.7 5671077 5675330 + gene protein_coding_gene FALSE TRUE AT3G16650.1 PP1/PP2A phosphatases pleiotropic regulator 2 (PRL2) Identical to PP1/PP2A phosphatases pleiotropic regulator PRL2 (PRL2) [Arabidopsis Thaliana] (GB:Q39190;GB:Q940Q7;GB:Q9LUR9); similar to PRL1 (PLEIOTROPIC REGULATORY LOCUS 1), nucleotide binding [Arabidopsis thaliana] (TAIR:AT4G15900.1); similar to PP1/PP2A phosphatases pleiotropic regulator PRL1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95840.1); similar to Os03g0339100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050058.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.02478497144683 11.95931263962 1.34032406821939e-07 0.00207187294465353 11.1547140169109 8.46024361808738 1.02478497144683 0.0459614932583277 AT2G40150_at 3.35014346722201 3.66828470219373 1.90800501309869 1.89955439960503 2.05767324116011 2.24477155994802 5.49989560449173 5.60153087764367 4.02093410511344 4.67362292811905 5.25250163414994 6.01625943558238 4.65713857865002 5.25116364282367 5.55228268555075 4.68054374355161 3.5524346699383 4.49764937892659 5.08258951532036 0.283291814511833 0.275351477280063 0.304604683130936 0.304513066950347 0.289960847506407 0.291489194984031 0.286023752278836 0.291401410400555 0.280225583676271 0.275351477280063 0.276361082811075 0.283375200754306 0.278131464861667 0.287617141895679 0.275351477280063 0.275351477280063 0.281032082772014 0.277438387013795 0.280533834571709 2 0|2 /|+ 16783703 16784155 16783965.5 16782520 16784321 + gene protein_coding_gene FALSE TRUE AT2G40150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to Os03g0291800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049800.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95402.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -1.08117403556956 -11.9539662245914 1.34643352451133e-07 0.00208118229883716 11.1523676317493 8.04117181016917 -1.08117403556956 0.066264519455454 AT3G03520_at 5.04781856440912 5.42862444631711 5.55305554329525 5.53314081538676 6.38926622571748 5.97269233451796 3.72177395312723 3.76739086306049 3.31369749561838 3.48556106328503 4.69701056033915 4.47623846020503 4.44271532730269 4.6018654574104 3.54957033993905 4.07575659791848 4.62062169824038 4.4614544580275 3.21442942502524 0.262805637550830 0.259027948948673 0.257896041434885 0.268360613469876 0.257896041434885 0.276109748536986 0.258632173100886 0.269651755114801 0.274408229461657 0.260888702641525 0.263921043596780 0.265321517575786 0.264551538393302 0.275333634090847 0.260621269496178 0.271416465553261 0.281655882810926 0.257896041434885 0.260194266136236 3 3|0 -|/ 838016 838722 838363.1 837884 840631 - gene protein_coding_gene FALSE TRUE AT3G03520.1 phosphoesterase family protein similar to NPC4 (NONSPECIFIC PHOSPHOLIPASE C4), hydrolase, acting on ester bonds [Arabidopsis thaliana] (TAIR:AT3G03530.1); similar to phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT3G03540.1); similar to putative phospholipase [Oryza sativa] (GB:AAK82449.1); similar to Os11g0593000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068198.1); similar to Os03g0852800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051927.1); contains InterPro domain Phosphoesterase; (InterPro:IPR007312) 1.19919744539042 11.9322878319514 1.37151746805062e-07 0.00211981739861904 11.1428338740783 9.02849539676178 1.19919744539042 0.0980510720970224 AT4G12080_at 3.50551403555482 3.94344412959205 4.8710594052772 4.88805987157822 5.3510755563606 5.43041849153804 3.10425736705958 3.03793855806906 1.99255803055801 2.56245875907151 3.34143858363690 2.0523922730236 3.31723353249396 3.22324721207242 2.49233840205711 2.79311690810573 3.87326516034945 2.79031290859884 2.90682701928659 0.245618883359301 0.24328805296007 0.247215874944824 0.246233841954103 0.249887758587828 0.255820897855412 0.244538278932626 0.252946791513932 0.250352689996127 0.24328805296007 0.261401780502186 0.24328805296007 0.24479755092885 0.246128280868190 0.257226372240689 0.24790463398714 0.249783203297433 0.247675410526646 0.24328805296007 4 4 + 7240583 7241172 7240899.364 7239213 7241488 + gene protein_coding_gene FALSE TRUE AT4G12080.1 DNA-binding family protein similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22770.1); similar to HMG-I and HMG-Y, DNA-binding [Medicago truncatula] (GB:ABE87426.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 1.11775083076160 11.9163724199372 1.39025591256261e-07 0.00214864051286552 11.1358143517899 7.00282062296917 1.11775083076160 0.0779255887119458 AT4G39670_at 3.84312713773333 3.53452964354087 6.80622063066041 6.83851788833215 3.70473167373758 3.2479881195512 0.871693544935283 0.515584197473127 1.62152110278148 1.09803687058720 0.937683169634402 0.947168489211052 0.745883012245496 0.763320308924365 0.621995632327503 0.554487166319382 0.8672236115404 0.344675153666712 0.727578487623343 0.313683771524032 0.318505959274876 0.340092469911384 0.340826368482589 0.312818002706827 0.309682521465859 0.302734995617349 0.298953574739298 0.307599947154298 0.306883410234203 0.304992135180684 0.303200782457842 0.307711010586369 0.300288930507904 0.308635279553487 0.298953574739298 0.304479002033086 0.305825987547944 0.306934035617896 4 4 + 18410234 18410784 18410525.727 18410166 18410994 + gene protein_coding_gene FALSE TRUE AT4G39670.1 similar to ACD11 (ACCELERATED CELL DEATH 11) [Arabidopsis thaliana] (TAIR:AT2G34690.1); similar to Os03g0710700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051050.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98504.1); contains domain GLYCOLIPID TRANSFER PROTEIN-RELATED (PTHR10219) 1.26594501406800 11.8991261151351 1.41087556258799e-07 0.00218036709442348 11.1281884481129 4.60622413198599 1.26594501406800 0.113704166373095 AT1G12010_at 2.89075605391559 3.36884804848064 2.14020496172563 2.18057542760862 2.24992290176251 2.69620334503109 4.59103618750116 4.43206859119652 3.3428065328851 4.13774831618648 2.80298055294925 2.82720103996540 2.83092388533719 2.33500381867212 2.44762839538739 2.81641250803964 2.91579057048197 2.73060571697033 3.82396971567693 0.243945716644151 0.234761054910286 0.236671410601742 0.238461225101982 0.232249464871601 0.239265553693862 0.255282705397996 0.253917257263992 0.23502031353767 0.240643492353256 0.236620118538488 0.244563200684744 0.240175395043697 0.237062621103768 0.246038045937666 0.231683933518944 0.241524174722193 0.231683933518944 0.238435606777639 1 1 + 4056989 4057638 4057310 4056205 4057931 + gene protein_coding_gene FALSE TRUE AT1G12010.1 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative encodes a protein whose sequence is similar to 1-amino-cyclopropane-1-carboxylic acid oxidase similar to ACO2 (ACC OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT1G62380.1); similar to ACC oxidase [Brassica oleracea] (GB:CAA57285.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -1.27940355259114 -11.8937026534704 1.41742827037139e-07 0.00219035190620491 11.1257861452954 6.30944852259851 -1.27940355259114 0.116685392051229 AT2G43820_at 8.8565869948057 9.16368128394352 7.71110631526809 7.80652556755607 9.11618804452739 8.95317410880503 6.95055923947403 6.87021473509319 8.2036174133378 7.64012294316765 3.87422003008521 3.69005433948825 4.87200513489193 5.01707485084701 5.43110629891838 6.96129011421597 6.53477254258713 5.97620854611447 7.74183130123738 0.220853462089748 0.219747396051776 0.214472321016907 0.214741030156751 0.21912237372509 0.227556797572444 0.213991008220225 0.215074593125653 0.216103237058721 0.213306582692247 0.218055534708463 0.226064589739860 0.212888231952477 0.221923759028391 0.235104891985646 0.212730233566609 0.215540503123562 0.213544080543367 0.216184537195722 2 2 + 18160193 18160711 18160331.545 18159304 18160985 + gene protein_coding_gene FALSE TRUE AT2G43820.1 GT/UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2); UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G43840.1); similar to UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] (GB:AAF61647.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.06538889569701 -11.8609705810065 1.45768370170176e-07 0.00225241285586956 11.1112450134132 14.7567288868797 -1.06538889569701 0.0639226820897445 AT4G18050_at 3.39929956088925 3.7907160785735 6.04751068419814 5.93273625022054 5.06901497091946 4.67708661753485 4.96689166313023 5.04054030799117 2.07260561480695 2.53820101929695 3.25546332883409 3.97132834769493 3.12988041409885 3.17441089049218 2.82793303657035 4.62019052617607 5.3037716265538 3.06122545212214 2.62881118192115 0.247107078927722 0.246215342547914 0.262627329425101 0.248642815462873 0.239742819382025 0.253644222306225 0.245528611177807 0.251762625813914 0.252110623907690 0.246802301544018 0.245778328177744 0.245862545296025 0.239585710483834 0.241720454316133 0.250649412873605 0.242059453338391 0.259147444760405 0.246382446363327 0.247799546061907 4 4 + 10026900 10027401 10027109.273 10022217 10027427 + gene protein_coding_gene FALSE TRUE AT4G18050.1 PGP9 (P-GLYCOPROTEIN 9); ATPase, coupled to transmembrane movement of substances Identical to Multidrug resistance protein 9 (P-glycoprotein 9) (MDR9) [Arabidopsis Thaliana] (GB:Q9M0M2;GB:Q9SVW6); similar to PGP11 (P-GLYCOPROTEIN 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G02520.1); similar to (P-GLYCOPROTEIN 7, PGP7), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G46540.1); similar to PGP4 (P-GLYCOPROTEIN 4, P-GLYCOPROTEIN4), ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase [Arabidopsis thaliana] (TAIR:AT2G47000.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE92210.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE80334.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE93334.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.19352237110750 11.8475235947968 1.47457960021145e-07 0.00227837294028671 11.1052499915335 7.90609021242855 1.19352237110750 0.0987188533159624 AT2G36470_at 5.57673656953683 5.68214824837264 4.98953217634656 4.72767120149206 6.32266470152515 6.13803091008135 2.84962593391173 3.46345154459568 4.14721405358624 3.67409607603126 5.39790247017533 5.42645388082885 5.01631289499413 5.57420331656995 5.2142265924752 5.00091596838199 4.75351828646363 5.65179987369391 3.63294620279986 0.222221773821388 0.206244852941540 0.207000888554048 0.211475330599370 0.211987473239481 0.214350629839185 0.217311619577665 0.212775151966917 0.206122857666966 0.203661399784665 0.209032186849459 0.202861795012021 0.205084569582381 0.202861795012021 0.208523442411442 0.202861795012021 0.222997623980201 0.21228958482335 0.204532118905541 2 2 - 15306471 15307031 15306845.636 15306441 15308069 - gene protein_coding_gene FALSE TRUE AT2G36470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27770.1); similar to Os11g0150200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065758.1); similar to Os07g0572300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060057.1); similar to H0321H01.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66493.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) 1.29390769478291 11.8281460602414 1.49930211145617e-07 0.00231642176219978 11.0965891371661 9.50498371302625 1.29390769478291 0.12120676375606 AT2G12550_at 7.40283392356638 7.02572362203014 7.9159114555383 7.8332484364526 7.36815940683833 7.22260686637374 5.47462649514651 5.18648391545339 4.79293502576353 4.70862028482444 5.55558521163898 6.01049907342309 5.77165970873313 5.89572225991394 5.6503364260241 5.84957500168249 5.86394464717666 5.73313573165418 4.9495474743736 0.293386496645557 0.290554850257559 0.294978551437312 0.297075083570108 0.299190377205181 0.29440791078146 0.299266767765206 0.287480738268439 0.287047039651199 0.304844364043081 0.289943913560924 0.288117816779117 0.284964770760058 0.289216243635528 0.281700190621349 0.288438141980621 0.29140276717126 0.288718030180321 0.28339017723973 2 2 + 5124897 5125526 5125210 5121950 5125829 + gene protein_coding_gene FALSE TRUE AT2G12550.1 ubiquitin-associated (UBA)/TS-N domain-containing protein similar to H0413E07.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86152.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 1.14341877406430 11.8222796397641 1.5068751314157e-07 0.00232797139052412 11.0939620246653 12.2328700247673 1.14341877406430 0.0870891543451082 AT3G22840_at 4.27359432274342 4.76803007854587 2.72748893357074 2.96630722799242 2.41923821547627 2.47407878980568 4.65246622775922 4.73177715217807 2.67612824862926 3.75600297807867 2.37911881836295 2.70897377979832 2.64934103007359 2.84062494437672 2.27334163954838 3.19516036603619 3.23808317823426 2.41039642206885 2.90957714681235 0.29824961119826 0.297607666149801 0.285756915064819 0.269627382035911 0.276773031143716 0.297903711723859 0.304771854618237 0.285018121472227 0.276571464789860 0.269627382035911 0.271239592559801 0.271547931896122 0.273156599308506 0.269627382035911 0.295605631803171 0.272346522381018 0.274934199548876 0.275397556839593 0.276982957881284 3 3 - 8084653 8085412 8084993.909 8084471 8085567 - gene protein_coding_gene FALSE TRUE AT3G22840.1 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding Encodes an early light-inducible protein. similar to ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2), chlorophyll binding [Arabidopsis thaliana] (TAIR:AT4G14690.1); similar to ELIP [Brassica rapa subsp. pekinensis] (GB:AAR11456.1); contains domain EARLY LIGHT-INDUCED PROTEIN (PTHR14154:SF1); contains domain UPF0041 BRAIN PROTEIN 44-RELATED (PTHR14154) -1.18085571122819 -11.8158171409631 1.51526572575140e-07 0.00234078249314077 11.0910652281523 6.53951402525188 -1.18085571122819 0.0964767886248376 AT1G73830_at 4.20105337639787 3.70246877976265 3.51076201311178 3.79179717930810 4.90309625054956 4.86285117366222 3.72455918736101 3.56630509067844 5.81380481360766 4.99698596918778 7.95992058959335 7.85629057806297 7.67919869836702 7.95597439140766 7.57326220444416 8.04963890522105 7.82551608144007 6.91818498313714 6.52466678687967 0.289252050110127 0.288421642290839 0.300942936538282 0.302627645863121 0.284798423522427 0.287744060533152 0.290419253279040 0.301750533715082 0.297642845582094 0.302037867408048 0.291162436994067 0.28522590409101 0.292525211495766 0.29420971660103 0.297932205847291 0.287256251036939 0.318410235472725 0.284798423522427 0.287642209126491 1 1 + 27763887 27764978 27764409 27763636 27765108 + gene protein_coding_gene FALSE TRUE AT1G73830.1 BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor similar to BEE1 (BR ENHANCED EXPRESSION 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G18400.1); similar to putative bZIPtranscription factor protein [Brassica oleracea] (GB:AAW81732.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.20864624650436 11.8143953211225 1.51711854498605e-07 0.00234349301643995 11.0904275146853 10.7857287116127 1.20864624650436 0.102997534667490 AT4G32710_at 1.96843424447951 1.94159355389225 0.831609392279279 0.667495408244173 1.46746097470453 1.35463372347915 2.43095826131715 2.49082418907794 2.81216146517172 2.93455633957336 2.19884096411805 2.05688613411126 1.46224612658946 1.8850061529353 2.33278756225462 1.81542263525505 1.59108919030101 2.42582949171701 2.72713942574425 0.229517752106663 0.233517428254029 0.240192132396765 0.248232351577053 0.228123795433145 0.233269648225996 0.244074391931638 0.242307884087721 0.263753545187256 0.234304015900181 0.232504612785023 0.23201555413411 0.238956086743151 0.244192376486809 0.236827657444923 0.233233927217980 0.240969794807659 0.234936001800649 0.233083464854547 4 4|0 +|/ 15782232 15783201 15782694.889 15781051 15783466 + gene protein_coding_gene FALSE TRUE AT4G32710.1 kinase similar to ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1), ATP binding / protein kinase [Arabidopsis thaliana] (TAIR:AT3G24550.1); similar to putative receptor protein kinase PERK1 [Glycine max] (GB:BAE46451.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.990629116092242 -11.7981028451560 1.53852622459869e-07 0.00237640760651513 11.0831100536816 4.04194252292925 -0.990629116092242 0.0362869428873206 AT2G38080_at 1.43849488531489 1.23452037548008 3.0165967545375 3.02614618372824 1.92440822576592 2.05750946723526 1.91282059040888 1.68419968335686 2.07169335507395 1.65863074986816 2.87207423293794 3.06283124610944 3.10661255497951 2.72642341504773 3.62917127512821 2.49876783558303 4.73098356887594 3.19643767587029 2.52294637568445 0.228542564753182 0.225894765675749 0.227012624837471 0.228827971213910 0.219816379043184 0.224143022273625 0.227179213963586 0.231872198766094 0.219297272034981 0.219297272034981 0.224012933281619 0.228205951869290 0.223859251769905 0.221142835746201 0.221190228214978 0.222839511727700 0.239633551815837 0.242252218113999 0.233441020269641 2 2 + 15943616 15944405 15943889.182 15941538 15944694 + gene protein_coding_gene FALSE TRUE AT2G38080.1 IRX12/LAC4 (laccase 4); copper ion binding / oxidoreductase Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. similar to LAC10 (laccase 10), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G01190.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to diphenol oxidase (GB:AAC49536.1); similar to laccase [Populus trichocarpa] (GB:CAA74103.1); similar to laccase (EC 1.10.3.2) precursor - common tobacco [Oryza sativa (japonica cultivar-group)] (GB:AAX95423.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 1.04107275310044 11.7911563891662 1.54775309968390e-07 0.00239050466246178 11.0799845963502 4.6930051302828 1.04107275310044 0.0578324379278635 AT1G53035_at 6.29516449401314 7.09183818759946 5.47993001340074 5.72748432277265 7.21943186772233 7.12101147963002 3.06055000827797 3.72234083331438 2.83245488442268 2.69280877608893 4.50433052867866 5.18018280126125 4.98214373180814 5.03812874557543 4.64837558010036 4.31881601591054 4.56277221092486 4.29818812114159 2.79248538016412 0.311294622475776 0.301751446765004 0.303785831194162 0.309434287389194 0.306422652086572 0.334616281719616 0.303739238743823 0.302496718240824 0.311229672312762 0.324245721543091 0.303486635099107 0.302548690727130 0.306744187111627 0.304556080969273 0.321306875712412 0.301751446765004 0.317383204472927 0.310790527591845 0.315598645024545 1 1 - 19765599 19765945 19765765.9 19765368 19766219 - gene protein_coding_gene FALSE TRUE AT1G53035.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15358.1); similar to unknown [Musa acuminata] (GB:ABC41688.1) 1.63176262172336 11.7896224512599 1.5497986918241e-07 0.00239350909965314 11.0792939723466 9.44681901608318 1.63176262172336 0.185065419591053 AT2G46620_at 7.72067640939209 7.720715105794 7.97504322801133 8.02287000482633 7.46504455325515 7.59770843359729 4.47365562433231 5.06993110010705 5.42601576109155 5.13971489283316 6.04514334160072 5.73996967144605 5.35921331410246 5.76153113541287 6.43497848491988 5.46283779243012 6.28847628185468 6.49427088889729 4.52585443488028 0.235147789774243 0.238694846988196 0.241962537209477 0.239986692993527 0.242476262198009 0.242994686131509 0.237066859607785 0.237866101336584 0.249689192897326 0.243563274605483 0.239885949153672 0.237200364133795 0.238544365373119 0.235022564972397 0.243628818091067 0.235662431160649 0.238322461946819 0.234960606510762 0.24306002617810 2 2 - 19146229 19146715 19146450.545 19145871 19147817 - gene protein_coding_gene FALSE TRUE AT2G46620.1 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28580.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE93512.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.21834812295709 11.7786192385085 1.56455839392647e-07 0.00241614752774064 11.0743352154269 12.4951210457984 1.21834812295709 0.106034865872021 AT2G34070_at 7.53325196423759 7.56887417358087 9.21519337903533 9.31797967414968 9.2179731995477 8.99188590198813 8.61410154992587 8.52443673696209 9.15742795620933 8.43965481081053 9.69268545600757 8.60252700107451 9.72397197046323 9.61563206489185 8.85036574268837 9.53635938711077 9.76372596446509 9.49504662499136 7.95860394944658 0.146697041098270 0.136810065804149 0.133091608191399 0.129268165646244 0.127516960340857 0.130530503563074 0.129101189070078 0.122645266072387 0.132176712995060 0.130947628286357 0.129324909300375 0.122645266072387 0.126870995374509 0.129269508923152 0.125322222662021 0.126621342259750 0.129174734739121 0.125521092532979 0.140597278548197 2 2 - 14394712 14395404 14394988.273 14394500 14397309 - gene protein_coding_gene FALSE TRUE AT2G34070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29050.1); similar to unknown [Pisum sativum] (GB:ABA29157.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 1.00853448507153 11.7656870176818 1.58210097999180e-07 0.00244308033330333 11.0684963662394 17.5872628300703 1.00853448507153 0.0461083389124439 AT3G59010_at 4.94079925555374 5.6389329468067 6.67882166511194 7.23915733923898 6.65655971063611 6.75099738605057 4.38269862766486 4.91175143984184 5.18853568926625 4.89657133581787 5.81680388506957 5.4411398031171 7.00450861826859 6.35504071575937 4.74431013678146 7.44918102182238 8.46487518573912 6.16197369147131 5.1749557892044 0.252727442326161 0.249561054501612 0.265048942733779 0.251018892776308 0.251741091648251 0.267027417143954 0.250216197142864 0.254067159886261 0.267527158749194 0.248331354734996 0.252733617241562 0.247636861309915 0.250493932970089 0.257320663597405 0.255112312886323 0.253375952213088 0.266864634242097 0.255207876079134 0.258971252168719 3 3 - 21814000 21814534 21814270.364 21813782 21816191 - gene protein_coding_gene FALSE TRUE AT3G59010.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G43050.1); similar to putative pectin methylesterase LuPME1 [Linum usitatissimum] (GB:AAK69695.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070) 1.60293999264170 11.7634359376691 1.58517633178707e-07 0.00244767077391242 11.0674788224331 11.6581731648713 1.60293999264170 0.180689462390455 AT4G33150_at 5.29702605606145 5.36588563690491 6.64958388362734 6.38830921127738 6.92078893397135 7.13532762489759 3.67110423549076 3.23136352153049 3.36269415857852 4.3208493191552 3.73815303022780 3.15001886316701 3.72976013699065 3.43804369194773 3.36377299514654 3.93416741562917 4.80897714232848 4.15113054340733 3.77139245954887 0.220002339285461 0.230601008476219 0.231450628505146 0.235689214799175 0.218718463077092 0.220926114775067 0.21783523234818 0.228288290798269 0.220991117819108 0.224009135446516 0.21783523234818 0.219612905708621 0.218418899187150 0.221936959042218 0.220007735967156 0.21849570857512 0.232647352782037 0.221017828522756 0.222300977618743 4 4|0 -|/ 15985653 15986421 15986030.889 15985192 15991541 - gene protein_coding_gene FALSE TRUE AT4G33150.1|AT4G33150.2 LKR (SACCHAROPINE DEHYDROGENASE) Identical to Alpha-aminoadipic semialdehyde synthase (LKR/SDH) (cAt-LKR/SDH) [Includes: Lysine ketoglutarate reductase (EC 1.5.1.8) (LKR); Saccharopine dehydrogenase (EC 1.5.1.9) (SDH) (cAt-SDH)] (LKR/SDH) [Arabidopsis Thaliana] (GB:Q9SMZ4;GB:O04155;GB:O04156;GB:O04884;GB:Q7DM71;GB:Q947M5;GB:Q94BT4); similar to bifunctional lysine-ketoglutarate reductase/saccharopine dehydrogenase [Gossypium hirsutum] (GB:AAN14410.1); similar to lysine ketoglutarate reductase/saccharopine dehydrogenase biofunctional enzyme [Zizania latifolia] (GB:ABF18958.1); similar to lysine ketoglutarate reductase/saccharopine dehydrogenase [Zea mays] (GB:AAG21985.1); contains InterPro domain Alanine dehydrogenase/PNT, C-terminal; (InterPro:IPR007698); contains InterPro domain Saccharopine dehydrogenase; (InterPro:IPR005097); contains InterPro domain LOR/SDH bifunctional enzyme conserved region; (InterPro:IPR007545); contains InterPro domain Alanine dehydrogenase/PNT, N-terminal; (InterPro:IPR007886) 1.17654927460395 11.7623183106902 1.58670560693725e-07 0.00244987345711112 11.0669734962432 9.38620611619505 1.17654927460395 0.0967257678471417 AT3G03770_at 4.04927014116183 4.1454089863935 4.00475480338569 3.84753830274266 3.579714505971 3.30711045179883 7.43570165020416 7.12519794972311 4.94180839160804 7.00383289654675 5.92135173452823 6.17215518222618 5.47578272829223 5.20171912714976 5.70646254424171 6.43650974385053 5.39292861438437 5.72659612807935 5.92803295350114 0.250951095328366 0.247892218610681 0.246915038290972 0.246915038290972 0.246915038290972 0.250954035141863 0.254328169454261 0.249651474999729 0.267890185679356 0.247713551433428 0.248929303512082 0.251504632956925 0.251605965597567 0.259185919005470 0.253676200699947 0.249111318602856 0.258891569925858 0.251788580959434 0.259405324001443 3 3|0 -|/ 945460 946279 945774.5 945146 949045 - gene protein_coding_gene FALSE TRUE AT3G03770.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G14210.1); similar to putative brassinosteroid LRR receptor kinase protein [Oryza sativa (japonica cultivar-group)] (GB:BAC07439.1); similar to transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAQ01159.1); similar to Protein kinase [Medicago truncatula] (GB:ABD28527.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -1.10390917721869 -11.7546950106042 1.59717955463251e-07 0.00246588551439714 11.0635243583888 10.5428769185373 -1.10390917721869 0.0782936525604936 AT3G15040_at 6.60362592222779 6.82459502034853 7.02270579754482 6.99071440395232 7.25679958132948 7.38529541724844 5.62441316639132 5.30815810446486 5.38682812458181 5.42729832612658 6.78462722704586 6.63634026968614 6.99853837962986 6.67771838911526 6.81307575224158 6.36862394876557 7.03264175487204 6.32038391138432 6.05587695511574 0.210205999433384 0.199917845902649 0.194987399092625 0.194987399092625 0.202231714768572 0.201200226815698 0.204632565165765 0.202628405545445 0.219270120291019 0.226175321736461 0.195934796224642 0.197588188649988 0.196754852584281 0.21111877515777 0.214717416700036 0.194987399092625 0.198561752303139 0.197301438293506 0.205448037454831 3 3 - 5065544 5066013 5065740.091 5064711 5066697 - gene protein_coding_gene FALSE TRUE AT3G15040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21970.1); similar to Os04g0413900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052750.1); similar to Os01g0862600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044884.1); similar to hypothetical protein LOC_Os10g27350 [Oryza sativa (japonica cultivar-group)] (GB:AAP53748.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 1.07716999107259 11.7544383561399 1.59753348535157e-07 0.00246627219468576 11.0634081653480 12.7907025130388 1.07716999107259 0.0705883239901475 AT2G18660_at 10.4358473289195 10.4574406184428 11.7122770185518 11.7533634300411 10.4768782335351 9.9632458843882 2.09582502128793 1.8501099251162 6.83090508883491 3.88247354718804 1.68252465226006 2.21831449409678 2.14453539008680 1.93761607412028 2.80182748783784 2.40869073997141 2.66295138314712 2.38214257986518 3.32212589662159 0.258676255425479 0.261235237324627 0.258770643758627 0.251945595743955 0.260127823547445 0.265555817200834 0.253034370105654 0.256762539867133 0.297597654177270 0.268659766395043 0.252512879902859 0.258532847003846 0.265865392740023 0.251945595743955 0.255620819143887 0.25345804745601 0.257280064105249 0.255161490672292 0.264519392768789 2 2|0 -|/ 8098249 8098663 8098421.5 8097740 8098738 - gene protein_coding_gene FALSE TRUE AT2G18660.1 expansin family protein (EXPR3) Identical to Expansin-like B3 precursor (AtEXLB3) (AtEXPR3) (Ath-ExpGamma-1.2) (EXLB3) [Arabidopsis Thaliana] (GB:Q9ZV52); similar to expansin-related [Arabidopsis thaliana] (TAIR:AT4G30380.1); similar to immuno-reactant natriuretic peptide-like protein [Erucastrum strigosum] (GB:AAM18791.1); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132) 1.18397962873956 11.7468323920914 1.60806097123861e-07 0.00248236372130105 11.0599626925537 12.0722868630627 1.18397962873956 0.098860793757815 AT1G70420_at 9.51619134386642 9.9153226839975 9.82846913242329 9.87539882995637 10.9250849859586 10.3466105725288 8.36573742156524 8.53380055703521 6.91267915796607 7.48864642883971 8.72912414353788 8.676765374376 9.3010622225487 9.18212076697834 8.03556725560932 8.29046312185793 8.9017401049018 8.3549424624334 7.3059051485077 0.169556722602236 0.169556722602236 0.169556722602236 0.169556722602236 0.179488520314636 0.176124345300532 0.178372737771750 0.173930210416873 0.199012608821022 0.187354635235261 0.176010450213867 0.171236600001875 0.169556722602236 0.186132296008096 0.178572381793677 0.174052196168386 0.188688242819539 0.175821893939952 0.177802196950348 1 1 - 26543690 26544078 26543864.091 26543237 26544425 - gene protein_coding_gene FALSE TRUE AT1G70420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23710.1); similar to Protein of unknown function DUF1645 [Medicago truncatula] (GB:ABE93113.1); contains InterPro domain Protein of unknown function DUF1645; (InterPro:IPR012442) 1.30467874084664 11.7452262439505 1.61029367044727e-07 0.00248564930970241 11.0592345966715 17.6231853209006 1.30467874084664 0.125316682269636 AT2G13810_at 3.00711455896355 4.12045956875655 8.89674498958321 9.04494127197278 2.26054506605319 1.85294765792515 0.846637253312486 0.533166477834826 1.26228230640998 0.789885376383803 0.932458728799293 0.76615753110295 0.675863090641693 1.24817631679751 0.719708911462154 1.1924832881564 0.96881479118751 1.62395855013964 0.394342391677143 0.282673512691611 0.280536643896036 0.271657738018686 0.270233183598367 0.257121008492906 0.267311955642531 0.25947675527183 0.257121008492906 0.261084010957022 0.259533948093482 0.263915319757252 0.260979445200982 0.267132238779259 0.258076761415325 0.259522602873067 0.259799757685988 0.257406628192601 0.257121008492906 0.257121008492906 2 2 + 5778499 5779195 5778778.182 5775528 5779341 + gene protein_coding_gene FALSE TRUE AT2G13810.1 ALD1 (AGD2-LIKE DEFENSE RESPONSE PROTEIN1); transaminase similar to AGD2 (ABERRANT GROWTH AND DEATH 2), transaminase [Arabidopsis thaliana] (TAIR:AT4G33680.1); similar to Os03g0299900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049852.1); similar to putative aminotransferase AGD2 [Oryza sativa (japonica cultivar-group)] (GB:AAR01225.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 1.79369978727282 11.7345858605519 1.62517006204489e-07 0.00250844999076629 11.0544065616573 4.73604761014665 1.79369978727282 0.213769714405599 AT3G14050_at 9.26440059617438 9.38120320254898 10.0793397663736 10.2700892374914 10.0374775553875 9.99272964226574 7.68065473429951 7.91464277186115 8.4683064626692 8.05120749932524 8.55545586148708 8.53950426259823 9.30680151324525 8.88344644330257 7.78322812703675 9.6148203318049 9.10192675787493 8.34305197409879 8.18843821597139 0.157882841732740 0.160182292742065 0.160577942388463 0.157057545351619 0.158931488328118 0.162631592287887 0.16289075701904 0.158687598690449 0.156918670407933 0.158242824302753 0.161916930221822 0.157565325005362 0.153361582497385 0.15929541904653 0.162988723083543 0.155982601747674 0.162841164330734 0.163665779442835 0.156677445344156 3 3 - 4650941 4651489 4651268.909 4650764 4653921 - gene protein_coding_gene FALSE TRUE AT3G14050.1 RSH2 (RELA-SPOT HOMOLOG); catalytic similar to RSH3 (RELA/SPOT HOMOLOG 3), catalytic [Arabidopsis thaliana] (TAIR:AT1G54130.1); similar to RelA-SpoT homolog 1 [Medicago truncatula] (GB:CAJ00006.1); similar to RSH2 [Nicotiana tabacum] (GB:AAQ23899.1); similar to RSH-like protein [Capsicum annuum] (GB:AAK82651.1); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain RelA/SpoT; (InterPro:IPR007685); contains InterPro domain Metal-dependent phosphohydrolase, HD subdomain; (InterPro:IPR006674) 1.03236453688384 11.7331879844858 1.62713550102307e-07 0.002511320932279 11.0537716914629 17.8285739224268 1.03236453688384 0.0565496958560121 AT4G29210_at 6.91436352012687 7.14271752962513 7.69622847282101 7.68771734673217 7.06979876590786 7.37507592635046 5.55912691737744 5.35360381824025 4.67694539913966 5.06445376043507 5.64737728641103 5.38008736619607 6.11430932254981 5.7575697086332 5.52400468804697 5.65729855652128 6.24978534391823 6.13253733712169 4.78689736555348 0.226461538731898 0.227297605391416 0.230075809207516 0.229424325456194 0.227027217124084 0.228461548786905 0.231502866361148 0.237105863763615 0.239869318103606 0.229193346981061 0.224421581676503 0.224421581676503 0.227736417286103 0.238811231310081 0.236892145414264 0.226240954905631 0.2281520227802 0.23497775863051 0.232997996720022 4 4|0 +|/ 14402544 14403266 14402836.1 14400926 14403525 + gene protein_coding_gene FALSE TRUE AT4G29210.1|AT4G29210.2 GGT3 (GAMMA-GLUTAMYL TRANSPEPTIDASE 3); gamma-glutamyltransferase/ glutathione gamma-glutamylcysteinyltransferase|GGT3 (GAMMA-GLUTAMYL TRANSPEPTIDASE 3); gamma-glutamyltransferase The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. similar to gamma-glutamyltransferase/ glutathione gamma-glutamylcysteinyltransferase [Arabidopsis thaliana] (TAIR:AT4G39650.1); similar to gamma-glutamyl transferase [Raphanus sativus] (GB:BAD22536.1); contains InterPro domain Gamma-glutamyltranspeptidase; (InterPro:IPR000101) 1.08992893720458 11.7312159261337 1.62991263874825e-07 0.00251544417538018 11.0528758133839 12.1751473919231 1.08992893720458 0.0749652114058754 AT3G23340_at 5.39842793202078 5.6308639650365 6.2314330491098 6.00284735128399 6.72022117844152 6.71905496689746 5.73146570927074 5.52603990349548 3.84001091527324 4.52021415997439 5.93642571523791 6.09168304876359 5.85803450595316 6.15798365059363 4.93229884996496 5.15702682212651 6.10070733732814 5.75246757247218 5.0613978227267 0.229920334330871 0.227851905330596 0.233562650004709 0.227851905330596 0.232785889342145 0.241433939780626 0.234955310220882 0.227915516567021 0.253390863828809 0.240150164811429 0.227851905330596 0.229274543675553 0.232600274937843 0.236280342855404 0.234093400577447 0.227851905330596 0.231358773103062 0.233281385116042 0.244023251803722 3 3 + 8352802 8353763 8353435.455 8350810 8353966 + gene protein_coding_gene FALSE TRUE AT3G23340.1 CKL10 (Casein Kinase I-like 10); casein kinase I/ kinase similar to CKI1 (CASEIN KINASE I), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G14340.1); similar to CKL13 (CASEIN KINASE LIKE 13), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT1G04440.1); similar to CKL8 (Casein Kinase I-like 8), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT5G43320.1); similar to Os02g0810400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048470.1); similar to Os02g0622100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047465.1); similar to putative casein kinase I [Oryza sativa (japonica cultivar-group)] (GB:CAD32377.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.06057194872878 11.7115443045723 1.65789839074192e-07 0.00255846879659294 11.0439243386856 11.1061456255094 1.06057194872878 0.0666831184685527 AT1G72970_at 3.91864138506623 4.41320797550834 2.11483346133123 1.97439830719847 2.48316821018221 2.55790032252929 6.40102864724889 6.92931212551502 6.50489922286398 6.40348620779088 7.93495112846258 8.81684699574064 6.51206970708973 7.11160618201283 8.16891298762429 6.89559324355166 4.23104063303482 6.52111437787642 6.6473409140045 0.278857368568287 0.274754622140408 0.308083003399176 0.295149961578171 0.275713067789586 0.287034568767242 0.272103660850362 0.278468802391047 0.275237208888349 0.275218695256298 0.273246261161723 0.272103660850362 0.272103660850362 0.276172051799998 0.272103660850362 0.272103660850362 0.276393151840761 0.278087561604210 0.277275099359586 1 1 + 27458766 27459191 27458990.091 27456427 27459625 + gene protein_coding_gene FALSE TRUE AT1G72970.1 HTH (HOTHEAD); aldehyde-lyase Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect. Identical to Protein HOTHEAD precursor (Protein ADHESION OF CALYX EDGES) (HTH) [Arabidopsis Thaliana] (GB:Q9S746;GB:Q9SXZ3); similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12570.1); similar to putative mandelonitrile lyase [Oryza sativa (japonica cultivar-group)] (GB:BAD29242.1); similar to Os09g0363900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062996.1); similar to putative mandelonitrile lyase [Oryza sativa] (GB:AAF65820.1); contains InterPro domain GMC oxidoreductase; (InterPro:IPR007867); contains InterPro domain Glucose-methanol-choline oxidoreductase; (InterPro:IPR000172); contains InterPro domain Alcohol oxidase; (InterPro:IPR012132) -1.31376549965999 -11.6993327124487 1.67553322998178e-07 0.00258551532718488 11.0383538270804 10.6203574818944 -1.31376549965999 0.128222466683990 AT3G60980_at 6.93614386431718 7.30812743795265 6.81807404595176 6.98113838681779 8.1193582503829 7.94144125335518 6.54913172372876 6.6466301933054 4.43286370128853 5.85578774386406 6.31463894823598 6.75967598343759 7.46703008124451 7.1942445578831 6.41008165153585 6.58967102243414 7.23291319950079 6.33670377948839 5.29895712090267 0.218676033488517 0.19869095659946 0.200631077239403 0.200985775514265 0.205423717246481 0.207092318818970 0.202035486213599 0.200259875674935 0.217285679016017 0.207619009319578 0.196420857271888 0.196100224552969 0.202678567143794 0.198005119271637 0.202048143738077 0.198268457784787 0.206150685932710 0.202318950826179 0.203559897792728 3 3 - 22576416 22576948 22576746.818 22576284 22577720 - gene protein_coding_gene FALSE TRUE AT3G60980.1 pentatricopeptide (PPR) repeat-containing protein similar to GRP23 (GLUTAMINE-RICH PROTEIN23), binding [Arabidopsis thaliana] (TAIR:AT1G10270.1); similar to ACT11D09.4 [Cucumis melo] (GB:AAS80150.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.09862253012627 11.6879239116211 1.69219280938162e-07 0.00261105350487585 11.0331400238319 13.1545003569707 1.09862253012627 0.0785679928594767 AT4G14630_at 1.86116582532301 1.70148530128948 5.47171071319404 6.4299405736195 2.86567701096911 2.34666470722601 0.515374716133051 0.625595159032953 0.494089441565529 0.276731915491215 0.542909808990135 0.210831257684262 0.52871400462469 0.664307523667281 0.686020200759329 0.572958461816143 0.794887896363864 0.507884916416127 0.308125944895513 0.283313217309488 0.284622207746878 0.330764669616205 0.351125469550192 0.292744891123234 0.302451108268454 0.280804214680877 0.279065935284680 0.281444990512554 0.279065935284680 0.289708796241992 0.279065935284680 0.285122943657753 0.284248513476059 0.279120424545318 0.279065935284680 0.290526246471176 0.286759977555172 0.289812315674280 4 0|4 /|+ 8393177 8393509 8393326.8 8392836 8393808 + gene protein_coding_gene FALSE TRUE AT4G14630.1 GLP9 (GERMIN-LIKE PROTEIN 9); manganese ion binding / metal ion binding / nutrient reservoir germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell. Identical to Germin-like protein subfamily 1 member 8 precursor (GLP9) [Arabidopsis Thaliana] (GB:Q9LEA7;GB:O23319); similar to manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G38940.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) 1.65325407947351 11.6743051952517 1.71231514063115e-07 0.00264193103047981 11.0269042532286 3.18880843056888 1.65325407947351 0.191553976192353 AT4G32020_at 10.4027243558234 10.5292254607851 11.5425204230042 11.4228776332841 11.9709287004185 11.6756089721094 11.2298601872907 11.1265148850476 10.3463398549312 9.87488354481962 11.3150723750942 11.1498894298313 11.6587730582261 11.4073710399541 10.9338748628820 11.3530942694021 11.6170510994642 11.3192277209074 10.0573650197033 0.0917027099848417 0.0885622458791642 0.0907055701501134 0.0953806199062514 0.0885359465531532 0.089344338419374 0.0880978762920486 0.0882822941842702 0.0922609103609874 0.0978450367244187 0.0895790615706935 0.0880978762920486 0.0899992915093242 0.0959776523923376 0.0897697711532598 0.089032334652977 0.0988403788025956 0.0880978762920486 0.0966047236991335 4 4 + 15488089 15488494 15488328.727 15487950 15489456 + gene protein_coding_gene FALSE TRUE AT4G32020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25250.1); similar to Os02g0797600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048398.1) 1.04116706772642 11.6569439258749 1.73834466615785e-07 0.00268191815094834 11.0189357866032 21.9561110964478 1.04116706772642 0.0619649090316143 AT1G03870_at 6.00841684718571 6.36950198794542 4.10670032022447 4.70738092586233 5.06039576202304 5.30814156234905 7.23170508634415 7.56816184626922 9.43315991445768 8.32886431190072 9.70358517518997 8.02210240229435 8.71947284986216 9.04683063765363 8.67770975984959 7.9934760504079 6.16728612025233 8.29966860507386 9.45568837651017 0.248414523201624 0.240381973371032 0.254357679202698 0.243611013019253 0.243645806253013 0.251829432444283 0.235930546261572 0.240268596648698 0.249169766699698 0.235214126616907 0.235214126616907 0.235214126616907 0.239377466418571 0.235214126616907 0.238727186342264 0.239755655476848 0.241970407843482 0.245164811106185 0.235547024211341 1 1 - 982693 983186 982915.273 982508 983539 - gene protein_coding_gene FALSE TRUE AT1G03870.1 FLA9 (FLA9) fasciclin-like arabinogalactan-protein 9 (Fla9) Identical to Fasciclin-like arabinogalactan protein 9 precursor (FLA9) [Arabidopsis Thaliana] (GB:Q9ZWA8;GB:Q8H794); similar to fasciclin-like arabinogalactan-protein, putative [Arabidopsis thaliana] (TAIR:AT5G44130.1); similar to unknown [Brassica rapa] (GB:ABK78690.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -1.37129810843564 -11.6329740575963 1.77499058072870e-07 0.00273827796889017 11.0078989093293 14.4957192011233 -1.37129810843564 0.141204631542089 AT4G12390_at 6.96827730697238 7.41962982867782 5.52738391062655 5.76358712149604 5.20386285063069 6.11788224501433 7.98521285471395 8.55306932459363 7.98965514439174 8.5593774488435 6.86247006050363 7.03572841427103 7.27069462320546 6.91889687500197 6.98325470798024 7.4402595522851 6.89090241386169 6.15303459260582 8.4278655360168 0.211585798563333 0.209950447722322 0.216165602720005 0.207690587492295 0.215002225995917 0.206589786761549 0.217779841890630 0.214873554680625 0.207812607509934 0.207525646505311 0.205601375324 0.205788343953156 0.205601375324 0.205601375324 0.211418899333867 0.208006981134668 0.218354170828814 0.212064667012866 0.209125999659657 4 4 + 7336653 7337145 7336882.364 7336494 7337353 + gene protein_coding_gene FALSE TRUE AT4G12390.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G62770.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -1.72979792579193 -11.6173741985943 1.79929001909961e-07 0.00277558478346306 11.0006939791103 14.3273821126982 -1.72979792579193 0.206029806783323 AT3G13310_at 8.5905302309594 8.56822858038196 8.63244600152184 8.48968270831765 9.04149076802655 9.424447972587 3.56583950933903 4.98784339064727 3.31280842891081 3.08702788260247 4.23377158130422 6.24511588945922 4.90506927349691 5.24335014814152 4.55388433778146 6.24191715603561 3.91037960827036 2.93613008905924 3.15350692611342 0.222514539464959 0.219232087635698 0.227426809618287 0.221472614222194 0.218966694029481 0.222553668989421 0.218966694029481 0.230372015838351 0.229388677327424 0.230609973719396 0.219034935176000 0.224372123801551 0.222757321249664 0.225637445465583 0.228314160846577 0.220254148463904 0.225558341583061 0.227146847289666 0.224955983881487 3 3 - 4310887 4311282 4311103.818 4310615 4311448 - gene protein_coding_gene FALSE TRUE AT3G13310.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein (J11) [Arabidopsis thaliana] (TAIR:AT4G36040.1); similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT2G17880.1); similar to Os06g0716100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058589.1); similar to DnaJ-like protein [Phaseolus vulgaris] (GB:AAB36543.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 2.03408047467468 11.6144079893723 1.8039511130399e-07 0.00278259459186405 10.9993220413046 11.6466386483822 2.03408047467468 0.256075879743510 AT3G46440_at 8.24947283173707 8.47837893996876 9.0305587638205 9.01465924262756 8.65198813670114 8.51191502553783 5.69643078310996 6.48951578895213 5.5520435720849 5.46829428658302 6.58687600242293 6.21970128794954 6.51555601794935 6.67351290506808 5.98155486965084 6.21756533572337 7.47137433751693 6.37696366654941 4.91018287726135 0.211142269724568 0.209902587895757 0.215428790872157 0.216124274734424 0.211289259784880 0.212529855585318 0.216612525951200 0.211151382824404 0.228443470231760 0.222581678329921 0.215944121304320 0.211118624896922 0.210771447077599 0.212258680398709 0.209902587895757 0.212218299686660 0.217872419771492 0.219690239989577 0.209902587895757 3 3|0 -|/ 17100253 17101258 17100732.9 17100030 17102860 - gene protein_coding_gene FALSE TRUE AT3G46440.1|AT3G46440.2 UXS5 (UDP-Xyl synthase 5); catalytic encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. similar to UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE) [Arabidopsis thaliana] (TAIR:AT5G59290.2); similar to UXS6 [Arabidopsis thaliana] (TAIR:AT2G28760.3); similar to UDP-glucuronic acid decarboxylase 3 [Populus tomentosa] (GB:AAX37336.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 1.38452259022025 11.5835101296354 1.85329069479466e-07 0.00285851556765128 10.9849935843544 13.9231457548053 1.38452259022025 0.144917664279886 AT2G22170_at 3.56093381751457 3.41228816625263 0.921385885121865 1.13935691965626 0.845948560471202 1.20605521704407 3.35293541987294 3.70359519736673 4.96750589935192 5.05978397617853 6.69170481082713 7.98331512098418 4.39523808340373 5.91692185345727 7.14581979563099 2.95640000499182 1.76051453364693 5.84411759419537 5.50278744698535 0.29610383925285 0.293008725643553 0.303965173913427 0.305468297788636 0.303465323679895 0.304638856282960 0.287228704306738 0.287228704306738 0.299056237877026 0.302818508542853 0.303754122009471 0.29950200419234 0.290499265315163 0.299915916280881 0.296850541033416 0.287338917473899 0.293703081030703 0.296559299156506 0.288637266453573 2 0|2 /|- 9434100 9434526 9434265.6 9433929 9434897 - gene protein_coding_gene FALSE TRUE AT2G22170.1 lipid-associated family protein similar to lipid-associated family protein [Arabidopsis thaliana] (TAIR:AT4G39730.1); similar to dehydration stress-induced protein [Brassica napus] (GB:AAK01359.1); contains InterPro domain Lipoxygenase, LH2; (InterPro:IPR001024); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976) -1.15959498543739 -11.5305605497763 1.94128274849316e-07 0.002994040383001 10.9602789603158 7.52453560565292 -1.15959498543739 0.0982374465811921 AT1G48330_at 7.72951116832132 8.18267754481062 7.31364618903673 7.43884621024979 8.8009184407333 8.46691391330289 5.42112224504558 6.04021959205541 4.48582241556022 5.07289834913047 5.9209244583151 6.47134143833624 7.56808844448952 6.70315989065399 6.22933490878259 6.59180269829153 6.80251391583998 6.46914246826069 5.40288072204362 0.238367706679408 0.241394947559273 0.227891875390350 0.226982169693672 0.249193863769888 0.236504533847228 0.228259703322948 0.231832033600434 0.253414130261733 0.238022711635888 0.237159718249373 0.231137827734541 0.231415490528354 0.226706253536051 0.237134948944442 0.238513658508116 0.226706253536051 0.226706253536051 0.233230396634154 1 1 + 17867616 17867762 17867692.909 17867505 17868054 + gene protein_coding_gene FALSE TRUE AT1G48330.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17580.1) 1.38451829153277 11.5187679667734 1.96149073123858e-07 0.00302501100571614 10.9547470111115 13.2151014246691 1.38451829153277 0.146420543675913 AT1G19640_at 2.32602103321430 2.43153025000437 2.59372473546009 2.49257549895555 1.79496055397394 1.51346180340264 6.09247727810376 6.05628924732951 2.26615400137154 3.10471326434513 2.21613752906524 2.10249554861065 3.01473982062455 3.36515699145805 1.7260471900367 4.51009201405806 3.7791155172445 1.64436088852597 2.68476958809797 0.235338827657496 0.237730062416229 0.242580942905575 0.236451916159224 0.242410696039618 0.245178486372348 0.263858626396335 0.270605270260474 0.244845115199330 0.245180650621834 0.242251847770213 0.235338827657496 0.239305941840552 0.236443054480375 0.244192976862452 0.249796072037018 0.242220267447642 0.247717932559216 0.240763995715857 1 1 - 6789169 6790391 6789686.091 6788876 6791837 - gene protein_coding_gene FALSE TRUE AT1G19640.1 JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE); jasmonate O-methyltransferase Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. Identical to Jasmonate O-methyltransferase (EC 2.1.1.141) (S-adenosyl-L- methionine:jasmonic acid carboxyl methyltransferase) (JMT) [Arabidopsis Thaliana] (GB:Q9AR07;GB:Q9FWR8); similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G11480.1); similar to jasmonic acid carboxyl methyltransferase [Capsicum annuum] (GB:ABB02661.1); similar to Jasmonate O-methyltransferase (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase) (GB:Q9AR07); similar to Jasmonate O-methyltransferase (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase) (Floral nectary-specific protein 1) (GB:Q9SBK6); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) -1.00917145068342 -11.5094850356601 1.97755868937658e-07 0.00304959325488762 10.9503852278479 5.90262028608444 -1.00917145068342 0.0552460536557897 AT2G31990_at 4.31391926404103 4.21465065442534 5.55569872702272 5.75277209283301 5.63698941432995 5.98953021972265 2.70690570409729 2.95188350266075 2.91739475470361 2.53122617152704 2.31905916242279 2.41762765628775 2.42377202908426 2.57576206852122 2.28949563445976 2.42841821960454 3.34924927053489 2.99620375767065 2.32472233088813 0.291713576505458 0.293259935727849 0.296342103222136 0.299053093529112 0.298602208719068 0.306284802783881 0.283095681387935 0.283095681387935 0.29159501910532 0.283095681387935 0.283095681387935 0.290622361734415 0.287168987757294 0.286337329659942 0.290190899681963 0.283095681387935 0.286112928336901 0.289260721707512 0.287039064622328 2 2 - 13618621 13619151 13618936.545 13618428 13620650 - gene protein_coding_gene FALSE TRUE AT2G31990.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G13990.1); similar to Os03g0144800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048945.1); similar to Xyloglucan galactosyltransferase KATAMARI1 homolog (GB:Q8H038); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 1.09787094397731 11.4891829933223 2.01319975481429e-07 0.00310435402192364 10.9408239604580 7.235825144323 1.09787094397731 0.0835320556711013 AT3G11840_at 6.31007568719586 7.07825540938993 7.96233533228381 8.1626194056565 7.38466581308713 6.93354562038569 3.39798889027991 3.32358366035172 4.40033545603663 3.62484323289298 3.39554573824963 4.47873096913924 3.8871095379463 4.15551601294873 3.16151215125437 4.1796628783766 4.77748248452518 4.77367442429245 3.36859553106303 0.287789811641639 0.267825525523469 0.276685534355119 0.272009878887855 0.278912697842936 0.268367126092061 0.270559288380730 0.272216282808992 0.27367111041654 0.27334206069507 0.269008998974482 0.265778040580802 0.268570944317233 0.276740899274835 0.272170357531720 0.265048476350622 0.277147519429217 0.268189059619573 0.269899356579703 3 3 - 3736599 3737077 3736865.909 3736406 3738263 - gene protein_coding_gene FALSE TRUE AT3G11840.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G35930.1); similar to hypothetical protein [Nicotiana benthamiana] (GB:BAF02552.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 1.44327258282147 11.4800242492669 2.02950590923631e-07 0.00312929516145147 10.9365007708205 10.2686732346234 1.44327258282147 0.158537280912428 AT1G52200_at 9.48057036002974 9.71835393930191 9.29791363692918 9.32613180012136 9.86535825146469 9.72561686891893 4.53311937801167 4.95989574102917 7.3091360647992 6.29214987364404 6.54932467788524 5.85668939225727 6.29672318003568 7.65831942518645 4.24109161555086 6.76792781243898 6.24521294701788 5.987506916395 5.46588034281683 0.269897522313807 0.272858699696801 0.272638281918110 0.274678419563414 0.271448244614581 0.273370278301395 0.27042051994333 0.277494793034054 0.274313852659140 0.278751048469338 0.272228225304808 0.269514238352782 0.271889686720081 0.271996108801739 0.277092152110806 0.269514238352782 0.285032871858742 0.282497319079701 0.271450612626398 1 1|0 -|/ 19445960 19446972 19446626.875 19445737 19447128 - gene protein_coding_gene FALSE TRUE AT1G52200.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18470.1); similar to Uncharacterized Cys-rich domain [Medicago truncatula] (GB:ABD32291.1); contains InterPro domain Protein of unknown function Cys-rich; (InterPro:IPR006461) 1.11269884342899 11.4659495918384 2.05484430201556e-07 0.0031681589448476 10.9298451365672 14.6414057917755 1.11269884342899 0.0880715655570667 AT4G04330_at 11.2138450098643 10.9402694812183 10.9714520832501 10.8319035662046 11.5671679309037 11.3343949247154 9.79987925522225 9.80851139902786 9.26786721396691 9.43330292736922 10.6428986662134 10.5061229386991 10.7362543119207 11.0359602702664 10.5473397654937 10.0779505338044 10.6141533556216 10.4890373522431 9.02640051111593 0.107469898302285 0.102711252479895 0.111374202088903 0.106367547588591 0.105639117782669 0.107496326381165 0.108265311672087 0.11111949732199 0.118370517183851 0.122128847082288 0.105430976011484 0.102111218921690 0.102111218921690 0.108286771894399 0.103044215959445 0.104231583359687 0.109331602546139 0.102111218921690 0.117655347478841 4 0|4 /|- 2116729 2118264 2117665.625 2116551 2118595 - gene protein_coding_gene FALSE TRUE AT4G04330.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56420.1); similar to Os08g0425200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061837.1) 1.03714721920036 11.4521341460524 2.08005018041611e-07 0.00320681336314752 10.9232979158682 20.7202970563509 1.03714721920036 0.0667046929024839 AT1G78780_at 3.00941480607914 3.03134870585894 4.58127866469991 4.51876591257388 4.00394322040145 3.92152533074003 2.06554425323197 1.95098238605987 2.02116681915716 2.74123207901654 2.56631908941704 2.10609701107625 2.12173691105262 2.36162976311488 2.64660996825294 2.38390097278792 3.36371376925802 2.68775889432538 2.37995343295483 0.217758935061194 0.208395504736218 0.226510943930865 0.223641364338984 0.223493549601816 0.215966230926626 0.222243397213267 0.206663320610495 0.231584997254138 0.211898480377948 0.215350356212580 0.209167927518879 0.213321570975091 0.208547992499769 0.206377404602757 0.206840954528946 0.219581349979077 0.208960581634017 0.207890556282454 1 1 - 29626345 29626843 29626628.909 29626237 29628049 - gene protein_coding_gene FALSE TRUE AT1G78780.1|AT1G78780.2|AT1G78780.3|AT1G78780.4 pathogenesis-related family protein similar to pathogenesis-related protein-like protein [Medicago truncatula] (GB:ABE85366.1); contains domain NTF2-like (SSF54427) 0.945496215665395 11.4375330682892 2.10705452380105e-07 0.0032482352538917 10.9163630901317 5.84060286384905 0.945496215665395 0.0269799214486146 AT3G51895_at 8.47042340537169 8.8556215460965 11.0079165301187 10.9820655562878 10.6737285528058 10.5014669938367 11.1566698850213 11.0213539604499 9.05340807785653 9.56238974849978 10.4005910360908 9.99085029775533 10.8404090333458 10.5985174015543 10.0005907981962 10.8126398135569 11.2916769460096 10.6976766952393 9.45535298119915 0.109168323067505 0.08987279633276 0.0883880360623331 0.0886542920054908 0.0885869817365721 0.0912820220305916 0.089028269430353 0.0875943448934087 0.0993850787222967 0.0921567604772874 0.086635662926724 0.086635662926724 0.0883275459245538 0.0938221179659458 0.090670839087761 0.086635662926724 0.0896385980525516 0.08756085836531 0.086635662926724 3 3|0 -|/ 19262532 19263436 19263115.75 19262265 19266738 - gene protein_coding_gene FALSE TRUE AT3G51895.1 SULTR3;1 (SULFATE TRANSPORTER 1); sulfate transporter Encodes a sulfate transporter. Identical to Sulfate transporter 3.1 (AST12) (AtST1) (SULTR3;1) [Arabidopsis Thaliana] (GB:Q9SV13;GB:O23250;GB:O64435;GB:O65025); similar to SULTR3,4 (SULTR3,4), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G15990.1); similar to AST91 (SULFATE TRANSPORTER 91), sulfate transporter [Arabidopsis thaliana] (TAIR:AT1G23090.1); similar to SULTR3,2 (SULFATE TRANSPORTER 3,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT4G02700.1); similar to Sulphate transporter [Medicago truncatula] (GB:ABE80289.1); similar to Putative sulfate transporter ATST1 [Oryza sativa (japonica cultivar-group)] (GB:AAN06871.1); similar to sulphate transporter [Brassica napus] (GB:CAE46442.1); contains InterPro domain Anti-sigma factor antagonist; (InterPro:IPR003658); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) 1.06867297128039 11.4342517436956 2.11317545449319e-07 0.00325745996310125 10.9148024487727 20.3017404397004 1.06867297128039 0.0768156738051232 AT2G28950_at 8.67712239170964 9.05290194017597 3.84223756435726 4.63249332704158 6.60103557272927 7.07195076403176 8.21528064284877 8.76394042525436 9.95368305863783 9.4194527388608 9.95431160372488 10.6497085036960 9.35607366337541 9.69261216088842 10.5102989388365 9.45393962588908 7.2604415877022 9.57536497711249 9.7566471717174 0.160878091507663 0.156937506569897 0.186590397113976 0.208085383202493 0.196401923744876 0.181421766403894 0.170253898305491 0.156937506569897 0.158123007739175 0.159302143740000 0.159527312988419 0.156937506569897 0.156937506569897 0.156937506569897 0.156937506569897 0.156937506569897 0.195689740803465 0.156937506569897 0.161784880812647 2 2|0 -|/ 12438961 12440063 12439533.7 12438418 12440672 - gene protein_coding_gene FALSE TRUE AT2G28950.1 ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. Identical to Expansin-A6 precursor (AtEXPA6) (Alpha-expansin-6) (At-EXP6) (AtEx6) (Ath-ExpAlpha-1.8) (EXPA6) [Arabidopsis Thaliana] (GB:Q38865;GB:O81065;GB:Q8LDV8); similar to ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) [Arabidopsis thaliana] (TAIR:AT2G39700.1); similar to Expansin [Brassica napus] (GB:CAA04385.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) -1.64685790835472 -11.4322731718054 2.11687557254119e-07 0.00326295200751499 10.9138610291363 16.7403810980478 -1.64685790835472 0.196438244429977 AT3G29810_at 2.10140590571022 2.76067013241014 3.94719512064676 3.91000538737174 4.4859994575155 4.47274958235653 2.06803751810298 2.11353070525263 5.83464487140882 4.11526168541759 6.54731084569395 3.90015877214571 5.33411366805112 5.9388253476237 4.96219904110326 3.99190311743414 4.37125873318616 5.77323637791607 3.87466433189528 0.229940577761868 0.219614719314899 0.217915634662028 0.215355498360778 0.220813349975041 0.22867995875126 0.225596535746935 0.225351396476648 0.228669567347126 0.220078632974037 0.228348386923362 0.214434709932817 0.221754260410425 0.220872577454328 0.218373627090834 0.216671159726730 0.227790718835443 0.227662571706253 0.217324085901340 3 3 + 11732008 11732587 11732291.182 11730595 11732718 + gene protein_coding_gene FALSE TRUE AT3G29810.1 phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 Identical to COBRA-like protein 2 precursor (COBL2) [Arabidopsis Thaliana] (GB:Q8L8Q7;GB:Q9FWK1;GB:Q9LJ49); similar to COBL4/IRX6 (COBRA-LIKE4), hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding [Arabidopsis thaliana] (TAIR:AT5G15630.1); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL3 [Arabidopsis thaliana] (TAIR:AT3G02210.1); similar to COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) (GB:Q6Z4G8); similar to hypothetical protein [Cleome spinosa] (GB:ABD96927.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13304.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918) 1.21863088162867 11.4180686758710 2.14364661504469e-07 0.00330400252776838 10.9070939144254 8.08773224323823 1.21863088162867 0.114563963217661 AT4G28780_at 3.46598527279005 3.54290630929388 1.29014768259584 0.755239797383294 1.99549179345811 1.97429850557423 5.09758953565109 4.22180769564790 5.80365393703828 4.7747675172266 6.18403615106542 6.69635480925077 3.39346264952001 5.24842869774873 7.08340808836924 2.89683149125296 2.11059555601110 3.65686405860216 4.90854070612648 0.254994109689462 0.253668686706906 0.256427549707896 0.269553692062091 0.260152264572748 0.251608014994614 0.260864339368201 0.259749076761248 0.260956767977279 0.255227649487539 0.251551383278102 0.256268686381423 0.254508570142432 0.258018515798236 0.251551383278102 0.251551383278102 0.252175973029679 0.252307218392028 0.256127251598353 4 4 + 14216418 14217021 14216722 14215551 14217585 + gene protein_coding_gene FALSE TRUE AT4G28780.1 GDSL-motif lipase/hydrolase family protein similar to ATLTL1/LTL1 (LI-TOLERANT LIPASE 1), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT3G04290.1); similar to GSDL-motif lipase [Agave americana] (GB:AAS75127.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -1.54092539549788 -11.4126624084955 2.15393205788456e-07 0.00331964008761168 10.9045144046911 7.7034675279783 -1.54092539549788 0.178127501443517 AT3G19260_at 7.01266755785129 7.31283602323262 7.6957629314235 7.77929546375627 7.6319554215929 7.318349461961 5.12873932038891 5.17975639055844 5.18169458190426 4.68026481034198 5.18327278353373 5.78176361481045 5.44138935276211 5.51807286820628 5.61327543788846 4.97549852727935 5.69415572039878 5.7041047433007 4.56991383283225 0.231838377033127 0.235100503247743 0.238674099002994 0.240645191645342 0.235182339027978 0.240744543395889 0.237241886837206 0.240726596055061 0.235116878304049 0.235009367577875 0.234859494994882 0.231838377033127 0.235107286064561 0.231838377033127 0.245749263650400 0.235646665252089 0.244148788521434 0.232129533420613 0.234957592768662 3 3|0 -|/ 6669976 6670728 6670379.889 6669152 6671525 - gene protein_coding_gene FALSE TRUE AT3G19260.1 LAG1 HOMOLOG 2 (LONGEVITY ASSURANCE GENE1 HOMOLOG 2) LAG1 homolog 2 Identical to LAG1 longevity assurance homolog 2 (LAG1 homolog 2) (LAG2) [Arabidopsis Thaliana] (GB:Q9LJK3;GB:Q9M6A2); similar to LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G13580.2); similar to Os02g0581300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047244.1); similar to ASC1-like protein (Alternaria stem canker resistance-like protein) (GB:Q8W4Y5); similar to Os03g0264000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049639.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Longevity-assurance protein (LAG1); (InterPro:IPR005547) 1.06307910966930 11.3672400817208 2.24249333723649e-07 0.00345590648201515 10.8827560183265 12.0322033410366 1.06307910966930 0.077010342509635 AT3G01290_at 11.0127176140012 11.0683267251034 11.1750993108515 11.2381872263321 10.7472256012620 10.4706653575920 6.22268087406265 6.05616573915743 9.62446441812142 6.93338534916375 8.00392791500229 7.37759892369534 6.43027315820925 8.05929195690199 6.83358702770551 6.89199284454181 6.6755661138961 8.04211940857779 6.24668646901942 0.232343467631698 0.229840508603511 0.23462435586653 0.231966005350396 0.231865807149821 0.231253570352672 0.236538427308493 0.234921784767152 0.236887205959826 0.236412578783400 0.227792864491383 0.228958466425260 0.227792864491383 0.227792864491383 0.230736549176372 0.229822637518467 0.228279028706836 0.228305401920347 0.243159166299864 3 3|0 -|/ 88294 89003 88553.111 88061 89429 - gene protein_coding_gene FALSE TRUE AT3G01290.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to hypersensitive-induced reaction protein [Capsicum annuum] (GB:AAS98165.1); similar to Os10g0464000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064791.1); contains InterPro domain Stomatin; (InterPro:IPR001972); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 1.00280211286315 11.3608729817731 2.25521996036905e-07 0.00347529395892871 10.8796937156121 17.1942869297125 1.00280211286315 0.0577300908989842 AT3G27210_at 8.3748799342126 8.67667943925625 8.18186222957481 8.7174191745153 9.03805533950075 8.57588310001405 4.74082296064156 4.78444429091799 2.25552205351940 2.98372483884757 3.15172077577843 2.76318165539801 3.88087269822973 3.32516297989243 2.55895252606453 3.29382848446831 3.77834746366646 3.35295180955212 2.7191697878261 0.322985063809606 0.322497610796446 0.325887149981470 0.318565907717761 0.329819028656218 0.327855988289761 0.323243040572812 0.312876496669383 0.317989396595422 0.312774890117382 0.306307344939163 0.306307344939163 0.310313653117752 0.31217952778161 0.311465343630443 0.306307344939163 0.313939976317905 0.309815705520123 0.313011401161272 3 3|0 -|/ 10046785 10048100 10047197.6 10046423 10048580 - gene protein_coding_gene FALSE TRUE AT3G27210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40860.1); similar to Os04g0380200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052596.1); similar to OSJNBb0089B03.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE03997.1); similar to Os01g0920100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045217.1) 1.29721002185551 11.3342002358633 2.30939181976843e-07 0.00355854185508118 10.8668322150032 10.5942222381770 1.29721002185551 0.133309409560863 AT2G47240_at 5.6350692288026 6.20407437964801 4.64819271021423 4.64731871652998 6.45460634325944 6.37636712425034 3.4299991338808 3.68966354570995 5.53117214689266 4.15158528576973 6.75316502874267 7.75335143668228 5.18663720080893 5.76518262652871 7.01672494792288 6.40718960472516 4.57231633061334 5.47883360288974 3.93160430236095 0.197645686242287 0.197216280572714 0.199893334234121 0.18652447455194 0.195317456827217 0.195524267314618 0.191017433063665 0.191241691165907 0.186674265054312 0.189780044272859 0.191059535056865 0.198202279920240 0.18652447455194 0.186812687761252 0.194130609527234 0.190444652903159 0.204948467104831 0.187700867363700 0.191983707314823 2 2 + 19403830 19404651 19404189.455 19399628 19404901 + gene protein_coding_gene FALSE TRUE AT2G47240.1|AT2G47240.2 long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein|long-chain-fatty-acid-CoA ligase similar to long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative [Arabidopsis thaliana] (TAIR:AT4G11030.1); similar to long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase [Arabidopsis thaliana] (TAIR:AT4G23850.1); similar to long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative [Arabidopsis thaliana] (TAIR:AT1G64400.1); similar to ACS-like protein [Gossypium hirsutum] (GB:ABA00145.1); similar to ACS-like protein [Gossypium hirsutum] (GB:ABA00144.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE87767.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 1.18523708528813 11.3316457646794 2.31465350450075e-07 0.00356641811973476 10.8655976523065 10.4630592356396 1.18523708528813 0.109081367622099 AT3G47160_at 10.8619901879679 10.8902335443423 10.8398188115196 10.7659706196555 11.6288914603060 11.1443319879814 9.0695496673085 9.25490008864121 9.03349612782128 9.0669127101108 10.0073131148127 9.78090653187904 10.1471153647445 10.0962584119489 9.56644442675895 9.9716389041845 9.8569912090044 9.99651290877858 8.24989669658667 0.121808691110880 0.118125478866390 0.123364001317461 0.118274716231538 0.119430304384816 0.122053083059789 0.128584007795581 0.121841090679019 0.148547859978984 0.122179041067312 0.122162519082744 0.119254786249642 0.118047627331957 0.118514276648934 0.122821181912142 0.117179970120690 0.124828398071283 0.128733065894704 0.130095986860963 3 3|0 -|/ 17371229 17372007 17371562 17370976 17373103 - gene protein_coding_gene FALSE TRUE AT3G47160.1 protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G58787.1); similar to Os04g0679800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054282.1); similar to H0801D08.18 [Oryza sativa (indica cultivar-group)] (GB:CAJ86260.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.11002363932083 11.3302818319234 2.31746824983489e-07 0.00357052333252061 10.8649382694333 19.9126271895587 1.11002363932083 0.0908172514038561 AT1G74560_at 7.6394733732648 7.47405076250732 7.13212511666284 7.32787722538585 6.69070065075581 6.88797672054953 8.49102543959449 8.55011649187743 5.30190467484322 6.81093343070513 4.50168675682874 4.93631466907314 5.30503357153988 4.80197921011591 5.88944164564325 4.5316326335669 6.69679329386338 4.97822627300736 6.40158780348165 0.222218198520603 0.213521627189907 0.21557391754735 0.220049963234434 0.215804556751996 0.213521627189907 0.214213386950614 0.218251023532255 0.229040488026655 0.222486697765938 0.216348420819813 0.226946988424581 0.223631052739496 0.227355781702682 0.214256866565535 0.217918973861568 0.229184057288768 0.217067392723780 0.227705976920279 1 1|0 -|/ 28021817 28022892 28022456.556 28021245 28023710 - gene protein_coding_gene FALSE TRUE AT1G74560.1|AT1G74560.2|AT1G74560.3 NRP1 (NAP1-RELATED PROTEIN 1); DNA binding / chromatin binding / histone binding|NRP1 (NAP1-RELATED PROTEIN 1); DNA binding|NRP1 (NAP1-RELATED PROTEIN 1) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. similar to NRP2 (NAP1-RELATED PROTEIN 2), DNA binding / chromatin binding / histone binding [Arabidopsis thaliana] (TAIR:AT1G18800.1); similar to Os02g0576700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047218.1); similar to nucleosome/chromatin assembly factor A [Zea mays] (GB:AAK67146.1); contains InterPro domain Nucleosome assembly protein (NAP); (InterPro:IPR002164) -0.99766669238884 -11.3282706640655 2.32162546967039e-07 0.00357669619857420 10.8639657300179 13.2124751274322 -0.99766669238884 0.0568960807203581 AT1G16350_at 6.42590491381645 6.50151419294823 5.08541527122434 5.3782857956839 5.11114934774608 5.69670295569551 6.90068854731032 7.29612272653837 5.19832923806846 6.9654836629358 4.67812510342419 5.75151261806892 5.10903056627318 4.65366913808836 5.81099153215299 5.67021225826157 5.0735436380753 5.09332105963892 6.90664845856691 0.234985238501568 0.233806348522073 0.240646633885758 0.243224122566148 0.232482314836222 0.235740677058133 0.229926497572028 0.233747796295674 0.244759463713209 0.229445797783519 0.233465114164 0.232966386729822 0.229146638764067 0.236503661144987 0.238877507467259 0.230659797374723 0.242700738628605 0.235219084630575 0.232573278447511 1 1|0 +|/ 5592005 5592825 5592341.625 5590945 5593001 + gene protein_coding_gene FALSE TRUE AT1G16350.1 inosine-5'-monophosphate dehydrogenase, putative Identical to Probable inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) [Arabidopsis Thaliana] (GB:Q9SA34); similar to inosine-5'-monophosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G79470.1); similar to inosine monophosphate dehydrogenase [Glycine max] (GB:CAB38030.1); similar to inosine monophosphate dehydrogenase [Vigna unguiculata] (GB:AAO40253.1); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain IMP dehydrogenase; (InterPro:IPR005990); contains InterPro domain IMP dehydrogenase/GMP reductase; (InterPro:IPR001093) -1.29496948325417 -11.3273835170057 2.32346183336956e-07 0.00357929295430581 10.8635366358928 11.8429085650896 -1.29496948325417 0.133008144510308 AT2G04030_at 7.79199870386452 7.80066875953718 7.56962958780232 7.27571887163819 7.01747979018949 6.45218297055431 8.60616710814667 8.40083364002675 7.86437846502581 8.49619715424055 6.36451207281658 6.64662823593848 7.00981451798831 6.29223192731603 7.48916300672063 7.41485439515238 7.76348721119589 6.5955001280296 8.55279529890308 0.175352018155507 0.182528050072235 0.179485260582136 0.180997464210994 0.178738729493558 0.179439232234789 0.185302400564898 0.178343237139807 0.181407459366984 0.183751198408317 0.185272408352904 0.175609411050023 0.187743779224082 0.182440473123143 0.187991453330919 0.188309275988013 0.186166886058378 0.183976112654238 0.178380928150382 2 2|0 +|/ 1285130 1285878 1285436 1281838 1286101 + gene protein_coding_gene FALSE TRUE AT2G04030.1|AT2G04030.2 CR88 (EMBRYO DEFECTIVE 1956); ATP binding Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. similar to ATP binding [Arabidopsis thaliana] (TAIR:AT3G07770.1); similar to heat shock protein 90C [Chlamydomonas reinhardtii] (GB:AAU10511.1); similar to heat-shock protein [Secale cereale] (GB:CAA82945.1); similar to Hsp90 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22030.1); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) -1.21429864183806 -11.3233071364338 2.33192007883336e-07 0.00359208968943491 10.8615642148623 15.2400753837789 -1.21429864183806 0.115853732913922 AT3G53310_at 5.74560056050762 6.13611851309867 5.93898061786849 6.66642006769826 7.4721415029811 7.00802604384405 4.22910211553397 4.39146403555105 3.45791707738135 3.46445187270415 4.53028611148234 4.69068443739833 4.77902256977109 5.13958681746052 4.70147577242693 5.15131838114029 5.07352207783373 4.11406404581319 3.5448506498923 0.275853094372403 0.268870121770595 0.273877476144821 0.281097903883355 0.272003453203869 0.298229456356343 0.267835901112567 0.279237929976722 0.279204174003504 0.276685819203102 0.266492378708494 0.266492378708494 0.268594143995897 0.266492378708494 0.28246725795426 0.267872034723901 0.280976378990322 0.278975823273403 0.267655572428693 3 3|0 -|/ 19777912 19778658 19778277.5 19777642 19779577 - gene protein_coding_gene FALSE TRUE AT3G53310.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to Os03g0621600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050679.1); similar to Transcriptional factor B3; Cupredoxin [Medicago truncatula] (GB:ABE81219.1); similar to Os03g0212300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049354.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 1.46462128929918 11.3226264681990 2.33333567627266e-07 0.00359403694216278 10.8612347407153 10.0792657954646 1.46462128929918 0.166297966411206 AT1G33770_at 3.35564039269338 3.38670391870553 2.60015487983058 2.49022375746888 2.5181138285431 2.67001291414815 3.53826583213265 3.56764669854498 5.39415966463485 4.72727636311741 4.45381512776407 3.87516371268210 3.64381345817702 4.24495158115267 4.29515030178945 4.05189597505533 3.20141055944549 4.17052538446468 4.85044404856227 0.217272706960878 0.209380446048952 0.213396980166570 0.209753922303533 0.209028692738576 0.21818076239315 0.208697152091437 0.209893483938240 0.21763020482097 0.208920837879214 0.209143598360625 0.206184841421308 0.206184841421308 0.212262029361358 0.206184841421308 0.206184841421308 0.211906143875785 0.214399159351381 0.212706477677618 1 1 + 12243722 12244375 12244058.091 12242106 12244442 + gene protein_coding_gene FALSE TRUE AT1G33770.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G10010.1); similar to transposon protein, putative, unclassified, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96101.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.945486897529975 -11.3223581021001 2.33389405807545e-07 0.00359466362824781 10.8611048298052 7.507204005094 -0.945486897529975 0.0332815937405643 AT1G06890_at 6.32776422238741 7.03873195550025 6.8698497482179 6.46310027886164 7.7686731384861 7.41744928928405 5.75409122703161 5.34966064887677 4.63729147186949 5.03506479741704 6.49008691641546 6.9188007025643 6.81030060361886 6.70522245676781 6.79066591913253 6.37479958692222 6.81070466403696 6.2998795640866 4.43620996034689 0.247602003750881 0.226400275066350 0.232733447732779 0.237775977678350 0.244031179905011 0.231285254644929 0.241756896746715 0.227016543012959 0.241260290595684 0.241658809253634 0.23358144234224 0.230248700597700 0.226442406898227 0.239830659681738 0.232913420244943 0.231099199500562 0.247719760027487 0.229370857042799 0.228929392101116 1 1 - 2111750 2112535 2112228.818 2111562 2114600 - gene protein_coding_gene FALSE TRUE AT1G06890.1|AT1G06890.2 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT2G28315.1); similar to Os05g0168700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054756.1); similar to Os01g0167500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042121.1); similar to putative glucose-6-phosphate/phosphate-tranlocat or [Oryza sativa] (GB:BAB41206.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 1.47970412103935 11.3119089910423 2.35574833404264e-07 0.00362808800925908 10.8560423878003 12.3001215443662 1.47970412103935 0.169367613085827 AT1G78570_at 9.20158903438035 9.38862873380222 8.85502900939578 8.64456922065605 7.71604417923354 7.58759609822802 9.93002989101427 10.0655416053341 8.79201274262734 9.15429192454645 8.02916824485632 8.87313335193836 8.52311964485811 8.0975851491882 7.82003821540363 8.03742450053737 8.15556213037353 8.96390797773583 8.643500170512 0.167139053297423 0.170848517243882 0.182365252074074 0.188134869467899 0.184720068821244 0.178614247606601 0.172600358874729 0.171965877780958 0.179031408500994 0.167498035554306 0.174601912904493 0.172067793625196 0.173124704132129 0.180186836857259 0.178588262538217 0.170309811520218 0.173551952783246 0.170382609781656 0.170014832029918 1 1|0 +|/ 29556416 29557038 29556711.1 29554542 29557331 + gene protein_coding_gene FALSE TRUE AT1G78570.1 RHM1/ROL1 (RHAMNOSE BIOSYNTHESIS1); UDP-glucose 4,6-dehydratase/ catalytic Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. Identical to Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC 1.1.1.-) (RHM1) [Arabidopsis Thaliana] (GB:Q9SYM5); similar to MUM4 (MUCILAGE-MODIFIED 4), catalytic [Arabidopsis thaliana] (TAIR:AT1G53500.1); similar to RHM3 (RHAMNOSE BIOSYNTHESIS 3), catalytic [Arabidopsis thaliana] (TAIR:AT3G14790.1); similar to UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase (ISS) [Ostreococcus tauri] (GB:CAL58329.1); similar to rhamnose biosynthetic enzyme 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95280.1); similar to Os03g0278200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049724.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain dTDP-glucose 4,6-dehydratase; (InterPro:IPR005888) -0.998206783310791 -11.2860764243386 2.41073576610538e-07 0.00371253307980228 10.8434914346565 17.5115088120506 -0.998206783310791 0.0584657200084131 AT1G07420_at 7.85910322803547 8.29120983486094 7.97796753283762 8.18960012179374 8.8748357661842 8.63006222377128 7.0839397933131 7.29257476095938 7.36802380483604 5.91137416900435 8.24481500639602 7.42012821663617 8.1234321312904 8.3247240588735 7.53785487415472 7.62650855213967 7.1158572470217 7.71493948543211 5.52790156262784 0.199459370394947 0.1916537456232 0.211184749918345 0.189090337019618 0.193507992762186 0.200383758167581 0.202002923421833 0.189730932237655 0.195771160212650 0.202720355371943 0.192172903366790 0.193742820979396 0.198310136453580 0.199317453195572 0.191978345387391 0.192142378223924 0.202567310646109 0.193893868035403 0.196951656624168 1 1 + 2279003 2279820 2279389.091 2277804 2280294 + gene protein_coding_gene FALSE TRUE AT1G07420.1|AT1G07420.2 SMO2-2 (sterol 4-alpha-methyl-oxidase 2); C-4 methylsterol oxidase Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA similar to SMO2-1 (sterol 4-alpha-methyl-oxidase 1), C-4 methylsterol oxidase [Arabidopsis thaliana] (TAIR:AT2G29390.2); similar to putative sterol 4-alpha-methyl-oxidase [Gossypium arboreum] (GB:AAO13795.1); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Sterol desaturase; (InterPro:IPR006088) 1.14042105392906 11.2623157278794 2.46254383409653e-07 0.00379207125012525 10.8319023834474 15.0412278037107 1.14042105392906 0.100154720871677 AT3G29575_at 7.51500032239198 7.78693862895674 8.421500307993 8.10119141781726 8.1751009814491 7.40389946383964 7.51451112480486 7.72905707088881 4.15775378842797 4.68898732414033 6.12167074554997 6.38870787958629 7.20452754369342 7.0462987231712 6.23156737583407 6.98227984125406 7.73969097541226 7.41130124189898 4.57409976062074 0.238700704136789 0.225304182425357 0.252929685390823 0.257886576919500 0.227562945687085 0.247270944359946 0.237670052484976 0.230802516666712 0.259638204747186 0.244439536542271 0.225304182425357 0.230161204815120 0.226385889144484 0.24481949997739 0.230878093960548 0.225527856966786 0.229614049733691 0.229323354461976 0.253462060264979 3 3|0 -|/ 11384904 11385998 11385280 11384693 11386483 - gene protein_coding_gene FALSE TRUE AT3G29575.1|AT3G29575.3|AT3G29575.4 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13740.1); similar to Os07g0602900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060209.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94628.1); similar to Os03g0419100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050378.1); contains InterPro domain Protein of unknown function DUF1675; (InterPro:IPR012463) 1.40309408620892 11.2466622993816 2.4973339724474e-07 0.00384539485077450 10.8242440616266 13.5130844973659 1.40309408620892 0.15645232460423 AT3G22910_at 2.36475855104262 2.52691105780476 7.08915127456881 7.10605882922493 1.94965509351844 1.53524785848036 1.80876329764674 1.89997889813158 1.8595109890494 2.03303120239753 1.75315647779184 1.76656912195451 1.56361529718136 1.6360388915759 1.2705383016262 1.67554690269202 2.51725688607985 1.77010262929013 1.80477270072695 0.240156114043467 0.238030388659702 0.252129324586054 0.252471068233466 0.239317201474232 0.242262362294542 0.233676370824959 0.242094559253895 0.240074030014206 0.234083582893652 0.233815742535972 0.238511136149308 0.236840122027386 0.240382235307215 0.243311462319241 0.237981280961374 0.233676370824959 0.239942693841684 0.235308616166158 3 3 - 8116361 8116917 8116692.455 8116342 8119395 - gene protein_coding_gene FALSE TRUE AT3G22910.1 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) Identical to Putative calcium-transporting ATPase 13, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 13) (ACA13) [Arabidopsis Thaliana] (GB:Q9LIK7); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) [Arabidopsis thaliana] (TAIR:AT3G63380.1); similar to ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G57110.2); similar to type IIB calcium ATPase [Medicago truncatula] (GB:AAL17950.1); similar to Putative calcium-transporting ATPase [Oryza sativa] (GB:AAM08790.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain ATPase, P-type cation-transporter, C-terminal; (InterPro:IPR006068); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) 1.05746170612886 11.2464476390687 2.49781475059588e-07 0.00384588537149247 10.8241389105665 5.10666962134325 1.05746170612886 0.0786652792524788 AT2G41480_at 2.53724176957381 2.35515361204738 4.46331441001446 4.3283311067492 3.94098622700822 4.36394613062158 3.70674431901978 3.35447892424472 3.51484475438271 3.03814037194267 4.26616695971423 3.00156530102184 4.40770181279469 3.81208723991757 3.59367793149510 4.95578411208074 5.4648924456634 4.84448750961947 3.30504730465204 0.253117375534298 0.244388789708483 0.241724915922125 0.25378762730011 0.242815181137383 0.247136557092017 0.246711285113943 0.240561816424751 0.25040336126047 0.248811078736718 0.252186026164771 0.261548276718780 0.244342966027332 0.243457441478634 0.242774759607837 0.248700250869379 0.260444172325047 0.250342454374942 0.244969641039601 2 2 - 17304208 17305141 17304532.182 17303890 17305809 - gene protein_coding_gene FALSE TRUE AT2G41480.1 peroxidase Identical to Peroxidase 25 precursor (EC 1.11.1.7) (Atperox P25) (PER25) [Arabidopsis Thaliana] (GB:O80822;GB:Q8L728); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64120.1); similar to putative peroxidase [Oryza sativa (japonica cultivar-group)] (GB:BAD68110.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 1.14651220804476 11.2062681629767 2.58959852687009e-07 0.0039869458919692 10.8043948400209 7.42092767459199 1.14651220804476 0.103016605197986 AT3G11230_at 7.26062010614063 7.2176682723319 7.6455492196616 7.34682416592709 7.54048816903781 6.61963459458653 3.63279933309376 3.65105790094937 4.9357493879597 4.11798077797763 5.61208386540373 5.17696496191185 4.92645877513763 5.96756474629682 5.6043883811982 5.46748400569956 5.02032731581334 5.44800119139489 3.956010386096 0.247266958088464 0.2442369289343 0.246179657010104 0.245997135630533 0.256867720825127 0.241458408644242 0.245129855484934 0.245245082216161 0.246432817629237 0.251070297337245 0.241458408644242 0.241458408644242 0.248125065639726 0.243395248442555 0.241458408644242 0.242986787987447 0.253800002924554 0.245564158352565 0.241458408644242 3 3|0 +|/ 3516831 3518164 3517595.25 3516583 3518391 + gene protein_coding_gene FALSE TRUE AT3G11230.1|AT3G11230.2 yippee family protein Identical to Protein yippee-like At3g11230 [Arabidopsis Thaliana] (GB:Q9C777;GB:Q8L918); similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT2G40110.1); similar to Protein yippee-like (GB:P59234); contains InterPro domain Yippee-like protein; (InterPro:IPR004910) 1.45695830276012 11.2047486213810 2.59314072347422e-07 0.00399214014378857 10.8036457071726 11.2340748899001 1.45695830276012 0.167727933256716 AT2G25840_at 6.39517151666467 6.22263091680984 5.34044193643078 5.27231376051137 5.56816503463616 5.33267585634617 7.0255769931099 6.79661696055315 6.78008510564783 6.82983531172662 5.81888330117218 6.65622820246188 5.68349535746601 5.91648958740935 6.99796599744402 6.0709484947968 5.45404565758359 5.90562504413671 6.94518494871837 0.210436818452846 0.225577906188800 0.210436818452846 0.212398192025485 0.211729199843029 0.221926595414375 0.211341159488845 0.224144037473302 0.233339611421526 0.212850371488709 0.219227579302117 0.218616942824104 0.212863354503610 0.217374231253718 0.225389756701254 0.210436818452846 0.226872682686415 0.2178650628105 0.210436818452846 2 2|0 +|/ 11030886 11032167 11031531 11028955 11032448 + gene protein_coding_gene FALSE TRUE AT2G25840.1|AT2G25840.2|AT2G25840.3 OVA4 (OVULE ABORTION 4); ATP binding / aminoacyl-tRNA ligase similar to putative tryptophanyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAD87908.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain Tryptophanyl-tRNA synthetase, class Ib; (InterPro:IPR002306); contains InterPro domain Aminoacyl-tRNA synthetase, class Ib; (InterPro:IPR002305)|similar to putative tryptophanyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAD87908.1); contains InterPro domain Tryptophanyl-tRNA synthetase, class Ib; (InterPro:IPR002306); contains InterPro domain Aminoacyl-tRNA synthetase, class Ib; (InterPro:IPR002305) -1.01017076659603 -11.2016157362482 2.60046037687376e-07 0.00400314870415946 10.8021006356045 12.4515301188860 -1.01017076659603 0.0652784480680254 AT4G02790_at 7.87289871409235 8.0796060454308 6.89820100576038 6.6330963065436 7.10438117863222 7.30328181654481 8.43901059155822 8.18935307881018 8.20105637901508 8.15725778122234 6.54028435034714 7.43721251923892 6.78994801393296 6.80756993845925 8.02368967216629 7.80993039568817 7.34362767948789 6.30848234194474 7.90830376996738 0.155085702844877 0.155284960790435 0.166783975401788 0.1565464665336 0.161765581044978 0.157670183659104 0.158306153276742 0.159510477674623 0.160700490813936 0.163586667085912 0.166151222415402 0.15258346476508 0.168153390688251 0.157550442021035 0.154029912352881 0.153269899815004 0.155635155942930 0.160463298158079 0.158405583674667 4 0|4 /|+ 1248620 1249325 1248950.3 1247386 1249588 + gene protein_coding_gene FALSE TRUE AT4G02790.1 GTP-binding family protein similar to GTP-binding family protein [Arabidopsis thaliana] (TAIR:AT2G41670.1); similar to Os05g0430400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055624.1); similar to COG1161: Predicted GTPases [Nostoc punctiforme PCC 73102] (GB:ZP_00109854.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain GTP-binding; (InterPro:IPR005289) -1.05837828004803 -11.1987093604790 2.60727085720471e-07 0.00401337203049521 10.8006665969945 15.1757114708265 -1.05837828004803 0.0802232519319905 AT4G23940_at 5.40257698030954 5.23557259602673 3.96583966129467 3.64520011696028 4.24277849289189 4.25108429234571 6.71169331140585 6.23908812382674 4.96871672065315 5.76060954562921 4.30579926991075 5.77760682370127 4.42911987468863 4.64362002001259 5.69333780541285 5.83210314256352 5.03929166328289 5.0735869145041 5.82789219438455 0.227310956732259 0.215018533955311 0.228822977352463 0.224354538259268 0.216549822551456 0.225663608493182 0.216951283609882 0.219237281658686 0.220167544219600 0.227259410580393 0.217092633913974 0.215018533955311 0.215018533955311 0.227102212824133 0.220345734642401 0.215420305807498 0.215721511606301 0.215466965336997 0.219827968214109 4 4 + 12441192 12441821 12441546.818 12437118 12441978 + gene protein_coding_gene FALSE TRUE AT4G23940.1 FtsH protease, putative similar to VAR2 (VARIEGATED 2), ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G30950.1); similar to 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus tauri] (GB:CAL55821.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -1.14538587149090 -11.1966590598323 2.61208694263471e-07 0.00402052422210334 10.7996545635834 10.2709197016236 -1.14538587149090 0.102982041833137 AT2G16790_at 3.66613839088123 4.19381649102878 5.52808922984013 5.60774652321937 6.3580329298973 5.77293972000323 3.93416011218610 4.07581493179028 4.23719974286106 4.44763731367292 5.87714350269238 4.01098606893218 5.78717285496658 6.00113843477624 3.95458498875847 4.83797403522059 5.77972183552212 5.34095287232372 4.62587256703635 0.214992293871881 0.204428136432661 0.208436429254642 0.217133121129689 0.212072084163095 0.218106798892894 0.204428136432661 0.212747059004683 0.21109120038665 0.206313524707432 0.205670338101827 0.204428136432661 0.212753680306006 0.221681165476323 0.21126202294585 0.208816227816231 0.216031865569024 0.210959628987587 0.204428136432661 2 2 - 7291222 7291703 7291430.182 7291039 7292319 - gene protein_coding_gene FALSE TRUE AT2G16790.1 shikimate kinase family protein similar to thermoresistant gluconokinase [Burkholderia thailandensis E264] (GB:YP_441767.1); contains InterPro domain Shikimate kinase; (InterPro:IPR000623); contains InterPro domain Carbohydrate kinase, thermoresistant glucokinase; (InterPro:IPR006001); contains InterPro domain Adenylylsulfate kinase; (InterPro:IPR002891) 1.30551286778033 11.1573799324965 2.70624031915957e-07 0.0041651744752185 10.7802035171086 9.7098985571087 1.30551286778033 0.139219181961247 AT1G75750_at 10.5792908915587 10.6768261972660 11.5698557646734 11.7374472091378 12.0454924276228 11.8113976365768 10.4711577315026 10.5910513126647 11.0647226374139 10.8987142806144 12.4172651310761 11.5955183862143 11.6299178543213 11.3060764025909 10.9774009327433 11.2916585488979 11.2497667106859 11.9106886361606 10.4259310458254 0.0647423309446503 0.0631944669871895 0.0652504149397434 0.0665301919363256 0.0637924378827738 0.0660951115593822 0.0646129786111288 0.0646312183414195 0.0684949813263852 0.0634671137383903 0.064915310573225 0.062573654476363 0.0632892199031808 0.0655726332559472 0.0644264913790856 0.0627287415956892 0.0676967294749436 0.0672754670965766 0.0647992613516312 1 1|0 -|/ 28445512 28445912 28445619.125 28445202 28446028 - gene protein_coding_gene FALSE TRUE AT1G75750.1 GASA1 (GAST1 PROTEIN HOMOLOG 1) GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data Identical to Gibberellin-regulated protein 1 precursor (GASA1) [Arabidopsis Thaliana] (GB:P46689;GB:Q8W114;GB:Q9LR14); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18420.1); similar to GAST1 protein homolog (GB:AAB06310.1); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854) 0.981148656819876 11.1511498987319 2.72150922035319e-07 0.00418840269012356 10.7771074061448 22.3571861780191 0.981148656819876 0.0565480761151481 AT3G10985_at 7.43807574632038 7.13109727776447 8.04003311574994 8.11126151532581 8.47680815801281 7.97215718718634 7.96707710787569 8.02172959459748 6.5551834420305 5.81002279736562 8.19694945554839 7.8420361252046 8.29428127263446 8.31132080336027 7.43490325369944 8.51634054368503 7.96718848094283 6.3932546658816 5.92809882566921 0.181147161875045 0.176211009540655 0.188584404839655 0.191325673490721 0.188322341532480 0.183665223181753 0.183102181671655 0.183456826085427 0.207707513744859 0.199186192119194 0.184346690227348 0.180708436132244 0.176211009540655 0.198398287771278 0.178090418780535 0.180056611687123 0.217284596840335 0.187769359706062 0.191353829520504 3 3 + 3442682 3443055 3442877.4 3442534 3443451 + gene protein_coding_gene FALSE TRUE AT3G10985.1 wound-responsive protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01740.1); similar to wound-induced protein WI12 [Mesembryanthemum crystallinum] (GB:AAD23999.1); contains InterPro domain Wound-induced WI12; (InterPro:IPR009798) 1.14116801626352 11.1387771119762 2.75211089413555e-07 0.00423522345498519 10.7709496030722 14.8784313029248 1.14116801626352 0.103394732596563 AT4G25420_at 2.92891102837801 3.19162903126610 1.60944021727845 1.94832058380517 2.72464487734170 2.6269690296435 4.12873438969762 4.28384130813583 2.74736191115946 3.8280081432831 2.47727571763888 3.79009458444074 3.14663211201986 2.55517468416426 3.17570751466929 3.54155063422982 2.46008896152291 2.81205432717094 4.51676462311614 0.223090529022897 0.228912927320801 0.223960197057811 0.232205737090082 0.227955509428962 0.220979388211161 0.233007134039272 0.222989952054078 0.237654286780225 0.229696836822480 0.226819831101715 0.223873736279806 0.223865710535453 0.2278079823059 0.230214358582438 0.221695811032105 0.226197848920222 0.223603018288393 0.233923949021966 4 4|0 -|/ 12990994 12991524 12991286.3 12990894 12992468 - gene protein_coding_gene FALSE TRUE AT4G25420.1 GA5 (GA REQUIRING 5); gibberellin 20-oxidase/ gibberellin 3-beta-dioxygenase Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light. Identical to Gibberellin 20 oxidase 1 (EC 1.14.11.-) (Gibberellin C-20 oxidase 1) (GA 20-oxidase 1) (AtGA20ox) (20ox1) [Arabidopsis Thaliana] (GB:Q39110;GB:Q38844;GB:Q9FYN4;GB:Q9FYN5;GB:Q9STJ5); similar to ATGA20OX2/GA20OX2 (Gibberellin 20 oxidase 2), gibberellin 20-oxidase [Arabidopsis thaliana] (TAIR:AT5G51810.1); similar to (GB:2116434A); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -1.05424558561150 -11.1374196818864 2.75549088444175e-07 0.00424014937297896 10.7702732985656 6.27641157961079 -1.05424558561150 0.0806997854244828 AT3G07350_at 5.97597518753023 6.72208237086955 3.15300078901244 3.49056707378717 5.12052107178018 4.99365094279343 5.51452551129929 6.0513022446995 5.01915837106328 5.72112571458135 4.46887889250847 4.53870486106238 4.26859571035637 4.30708848706403 4.13457195502843 3.01285932337546 3.92224995408941 4.26583588252697 4.74967175704293 0.267659873918687 0.275791389523473 0.277993712052093 0.274461546042313 0.256475868765940 0.263024372988753 0.2747724999085 0.265572601607098 0.267604445439305 0.2635677744219 0.258996837410152 0.256475868765940 0.259122104305627 0.256475868765940 0.262870480763497 0.272364306989097 0.257993914333929 0.259248637186455 0.257381455776225 3 3 + 2348035 2348535 2348300.182 2347474 2348797 + gene protein_coding_gene FALSE TRUE AT3G07350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G25240.1); similar to Os01g0915000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045184.1); similar to uncharacterized plant-specific domain TIGR01615 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93251.2); contains InterPro domain Protein of unknown function DUF506, plant; (InterPro:IPR006502) -1.46250342011704 -11.1197337185461 2.79994268700248e-07 0.00430827181249071 10.7614485772588 9.76678652271178 -1.46250342011704 0.170864838252124 AT1G09080_at 7.03482496534609 7.03782723143849 8.50601185042308 8.33068726329672 5.73625693461358 5.24301710225008 2.64203613952369 2.72120662072062 2.52258959595898 2.07794935453953 2.28141652537204 2.43378160292503 2.93977963415387 2.53296386529406 2.53387792732007 2.91149474573654 2.29694740991944 2.66742358256895 2.86166221694496 0.276623051732162 0.284737535722684 0.283156942716474 0.285497272234183 0.282448557943281 0.280105468731799 0.262917700704131 0.267982041144551 0.262587612754567 0.264178194157899 0.267350839023080 0.276682400108023 0.267041474783084 0.269107499647501 0.264979436826211 0.263538359015834 0.268619601614604 0.266347887357501 0.273749493827444 1 1|0 -|/ 2929340 2929921 2929697.6 2929220 2931843 - gene protein_coding_gene FALSE TRUE AT1G09080.1 luminal binding protein 3 (BiP-3) (BP3) similar to BIP (LUMINAL BINDING PROTEIN), ATP binding [Arabidopsis thaliana] (TAIR:AT5G42020.1); similar to luminal binding protein 1 (BiP-1) (BP1) [Arabidopsis thaliana] (TAIR:AT5G28540.1); similar to HSP70B (heat shock protein 70B), ATP binding [Arabidopsis thaliana] (TAIR:AT1G16030.1); similar to luminal binding protein [Pseudotsuga menziesii] (GB:CAA89834.2); similar to Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) (GB:Q03684); similar to Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) (GB:Q03685); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) 1.09116491045103 11.1066351950504 2.83336562115455e-07 0.00435941634470838 10.7548970694797 8.43753903885608 1.09116491045103 0.0916211636648532 AT4G15610_at 6.95560544766425 7.57224668020322 7.91838923660028 8.21386275539502 8.16920491308298 8.19112116614878 1.54007556401055 2.29301763923288 2.21880772954777 3.05370314301153 1.77375706575738 1.60944665870060 2.39944455140188 1.68846991256636 1.93009743913365 1.75491214036330 2.68760573909376 1.74275674325622 2.2540158139921 0.238144820147996 0.235884986368309 0.236336889710665 0.233257906039211 0.249600807234599 0.244002516254177 0.234927134051188 0.233557056441454 0.231612145581015 0.225393632157393 0.236403307207774 0.222724312367747 0.232889468887293 0.238281181771156 0.234963434343915 0.237029548431997 0.230722477127419 0.229754208247243 0.225282617211601 4 4|0 +|/ 8909214 8910552 8909915.4 8909062 8910906 + gene protein_coding_gene FALSE TRUE AT4G15610.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT3G06390.1); similar to unknown [Panax (GB:ABD73297.1); similar to Os07g0442900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059526.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 1.48618861873136 11.0897182149120 2.87717376201178e-07 0.00442653183285513 10.7464157632730 8.58526718035955 1.48618861873136 0.176053086356386 AT1G31280_at 3.52782295713838 3.28978437765802 4.31999671353476 4.33884641583376 3.94018382399873 4.01824507074753 2.88431550399252 2.82116526194680 3.33266541003156 2.94995064262178 3.81136298944323 3.2769819620065 3.82052305693844 3.92643440190518 3.58270135931387 4.16481599908882 4.34907784474748 4.17648241127245 2.78994725177452 0.236091293132365 0.225013246200710 0.231054426878362 0.225212191177783 0.230933262108213 0.232189057479633 0.22918784666725 0.233887201841776 0.245063314157092 0.230113969229764 0.226368443603051 0.230480352203113 0.228972585470680 0.228160760381368 0.230426196788302 0.224848439857684 0.226316040715422 0.224848439857684 0.232874789896152 1 1 + 11184633 11185009 11184833.545 11181692 11185325 + gene protein_coding_gene FALSE TRUE AT1G31280.1 AGO2 (ARGONAUTE 2) An Argonaute gene similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G31290.1); similar to Os04g0615700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053871.1); similar to H0525G02.4 [Oryza sativa (indica cultivar-group)] (GB:CAJ86307.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain Stem cell self-renewal protein Piwi; (InterPro:IPR003165) 0.943952857895818 11.0445033853118 2.99790869370526e-07 0.00461198273439617 10.7236366850627 7.09891265122237 0.943952857895818 0.0448272337758598 AT3G26830_at 5.87840599374972 6.56815808622646 9.57290321264182 9.76208770150436 5.98182482447795 4.79949512981236 1.10756576902150 1.35146639705116 1.55693448287282 1.74006957847099 1.78801378036892 1.12251023768987 1.41823368807886 1.85120843811452 1.41294798964568 1.19109352363076 1.71752698218569 1.72039712445239 1.58498020614945 0.326883464613802 0.311263973116115 0.295050125577576 0.296210496936706 0.320542908120799 0.30212236252804 0.285703103733492 0.276508735231821 0.279823335598696 0.285385521497086 0.281166160253310 0.296441751469813 0.278574369007321 0.276508735231821 0.281263179870023 0.277158402706314 0.276508735231821 0.281517492196328 0.289085659773028 3 3 + 9890230 9890759 9890452.545 9889190 9890942 + gene protein_coding_gene FALSE TRUE AT3G26830.1 PAD3 (PHYTOALEXIN DEFICIENT 3); oxygen binding Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin. Identical to Cytochrome P450 71B15 (EC 1.14.-.-) (CYP71B15) [Arabidopsis Thaliana] (GB:Q9LW27;GB:Q541X4); similar to CYP71B28 (cytochrome P450, family 71, subfamily B, polypeptide 28), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13090.1); similar to CYP71B7 (cytochrome P450, family 71, subfamily B, polypeptide 7), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13110.1); similar to CYP71B29 (cytochrome P450, family 71, subfamily B, polypeptide 29), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13100.1); similar to Cytochrome P450 71B38 (GB:Q9LXM3); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 1.85154601847666 11.0175175408007 3.07257804880532e-07 0.00472654681247723 10.7099641322372 7.2052731691533 1.85154601847666 0.242828423685017 AFFX-Athal-Actin_M_at 10.4984017418818 10.4425578239015 11.1950814884521 11.2474312715539 10.9918150298555 11.148418180833 10.2923488458855 10.7577200729905 10.1772409141574 10.2717744952119 11.7585582641441 11.6178011240188 11.7413862183678 11.6942593885756 11.8146493289956 11.5757958406952 11.4809033732261 11.5392058835857 10.0875928796159 0.0540638900497251 0.0529039049182476 0.0555748524314826 0.0541939461508316 0.0529039049182476 0.0560068590609043 0.0529039049182476 0.0549748962158983 0.0580680506888359 0.0535384796733225 0.0536842684232453 0.0529039049182476 0.0537126207335619 0.0544413035006432 0.0538554818095365 0.0529039049182476 0.0538358842411888 0.0548779006571381 0.0540234282244721 NA NA NA NA NA FALSE FALSE 1.06093993477410 11.0104113899073 3.09257444164388e-07 0.00475699800613662 10.7063541131517 21.7375664856006 1.06093993477410 0.0859985865029572 AT3G04000_at 5.66568680821017 5.97263617648037 6.76940362899724 7.06776702646476 6.84942437765128 7.1409669844825 3.61097085993139 3.86754644034362 3.80712212659898 3.98798626114468 3.68790986445943 3.49857778738424 3.56278598220522 3.85611474582868 3.73687967492596 4.6087438848673 3.91893160103185 3.88070257825598 3.58897746021599 0.279169667978799 0.277363340112978 0.27812354440122 0.284987440249322 0.278604359870808 0.287875752976254 0.272304573153119 0.274026024464023 0.269981317155567 0.269725886077478 0.264215710336919 0.276099171927058 0.265492015677323 0.263254133225066 0.265478108007112 0.267254080871603 0.283237894109690 0.263254133225066 0.263254133225066 3 3 + 1036043 1036408 1036231.909 1035507 1036679 + gene protein_coding_gene FALSE TRUE AT3G04000.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G03980.1); similar to short chain dehydrogenase [Solanum tuberosum] (GB:BAE46415.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 1.11340795768709 11.0007461582384 3.11999881310485e-07 0.00479887017443657 10.7014375787416 9.68731331158169 1.11340795768709 0.100023013555711 AT1G17050_at 7.22229887688393 7.77218599281886 7.16849711024451 7.38255062506096 6.7593559978174 6.68312944823211 9.58876468554214 9.87651072187641 8.60592245724873 9.29630804694916 8.07517143014713 8.45028097502144 8.3845274648754 8.29520893851327 7.65509672984145 9.26590713495453 8.08700256650767 8.20148543722306 9.18656457999366 0.22450405086992 0.210379504845380 0.221643526123624 0.220749198154477 0.224135319738464 0.225135515968502 0.210379504845380 0.219488368622302 0.238976428556057 0.218621629206564 0.219662082938308 0.215953396488321 0.217674764986191 0.222882244631095 0.217411674014066 0.218560489721360 0.236219365518072 0.211544616439978 0.214084536009235 1 1 + 5830821 5831152 5830963.909 5829092 5831326 + gene protein_coding_gene FALSE TRUE AT1G17050.1 SPS2 (Solanesyl diphosphate synthase 2); dimethylallyltranstransferase similar to solanesyl diphosphate synthase (SPS) [Arabidopsis thaliana] (TAIR:AT1G78510.1); similar to solanesyl diphosphate synthase [Hevea brasiliensis] (GB:ABD92707.1); contains InterPro domain Polyprenyl synthetase; (InterPro:IPR000092); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) -1.17216002535164 -10.9903838660803 3.14969427277495e-07 0.00484422979152787 10.6961581671962 16.4723784053259 -1.17216002535164 0.114373687165612 AT3G22600_at 8.4891521728867 8.82748786825812 10.6451664484817 10.6514046014150 7.65340748266514 7.31222427343819 1.924013303308 1.48541981030927 2.64199103291148 5.98982389676507 1.85457112468632 1.79458067047651 2.02051529754491 1.49574453573621 1.82682062912827 1.59070077585201 2.49888616445967 2.27646439030871 1.82000274322507 0.309512212007469 0.304664080800739 0.306006352469299 0.3070900447308 0.305875504343628 0.301925386201298 0.294910464125639 0.304102146644124 0.308607912739799 0.306466811566037 0.298595087061284 0.296378538020541 0.296240376097445 0.298660903562935 0.300573401839921 0.303940527920766 0.305043015663298 0.295751746378674 0.306771171891184 3 3|0 -|/ 8006719 8007275 8007094.4 8006515 8007478 - gene protein_coding_gene FALSE TRUE AT3G22600.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT4G14815.1); similar to Plant lipid transfer protein/Par allergen [Medicago truncatula] (GB:ABE87133.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.15993931851651 10.9476776663646 3.27535319196057e-07 0.00503716567391616 10.6743091612258 9.82539683150757 1.15993931851651 0.112589341888541 AT1G35190_at 7.30984124183596 7.4852438677929 6.09344979118358 6.21384696113135 7.34936175167866 7.2529629870495 6.96960240334258 6.75987061586387 5.78369648967292 6.59497942878951 4.20455678998424 4.32494113898001 5.43413500660741 5.47195918354519 3.95295249555844 4.42262948684305 5.20922506234053 5.15726925913672 6.47204722416747 0.230322904550319 0.231916076360252 0.234368164224285 0.237752594363659 0.231255878622291 0.243370922419850 0.230322904550319 0.233455944621875 0.232717773899036 0.231163520340721 0.234393580533504 0.231751010795746 0.239770073462892 0.242420024870315 0.240205493507011 0.232841536233902 0.244046143563416 0.230322904550319 0.230558886399985 1 1|0 +|/ 12891420 12892578 12892153.889 12890401 12892852 + gene protein_coding_gene FALSE TRUE AT1G35190.1|AT1G35190.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G46480.1); similar to Os01g0188100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042255.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE81241.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.95754999372512 -10.9472162420758 3.27674022422236e-07 0.00503897111680914 10.6740722893203 12.4571639193603 -0.95754999372512 0.0543242003744536 AT4G01950_at 3.91432189703711 3.73135530216507 3.03136449213510 2.80660953603408 2.41339552723062 2.35418002968088 5.79464962070548 5.47410309220648 3.30764302707378 3.50901431082045 4.87077393816555 4.47339498323079 3.09856799041507 4.37360010309991 3.5105221880555 2.74370615705017 2.49522646312686 3.37293813763674 3.91580738528701 0.258848593183472 0.260332141816140 0.271180003293756 0.264754972428039 0.259508668400427 0.267873360592351 0.264432685036108 0.270171595372919 0.259840400393695 0.25972392552383 0.260277248202187 0.256240174034982 0.264255597266444 0.256240174034982 0.256240174034982 0.260464570952313 0.264438509437449 0.262412097665257 0.256240174034982 4 4 - 844732 845134 844935.182 844409 846787 - gene protein_coding_gene FALSE TRUE AT4G01950.1 ATGPAT3/GPAT3 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3); acyltransferase Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity. Identical to Probable glycerol-3-phosphate acyltransferase 3 (EC 2.3.1.15) (AtGPAT3) (GPAT3) [Arabidopsis Thaliana] (GB:Q9SYJ2); similar to ATGPAT2/GPAT2 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 2), acyltransferase [Arabidopsis thaliana] (TAIR:AT1G02390.1); similar to Phospholipid/glycerol acyltransferase [Medicago truncatula] (GB:ABE87665.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123); contains InterPro domain Gamma-crystallin related; (InterPro:IPR011024) -1.01868353886060 -10.9462736718153 3.27957555152815e-07 0.00504300332558484 10.6735883679903 7.28741218022835 -1.01868353886060 0.075482016138355 AT2G40130_at 5.66321447829804 6.15958741581245 6.45558049075004 6.43588879420252 8.33053675969461 7.32177505892993 6.20347741920491 5.97764451872733 2.12667872464831 2.17701233724236 3.59953960357284 4.38387458909829 5.44837520116627 4.78604713115746 2.5866581932916 4.27622162897304 4.77681147564137 4.43246693704265 2.43671130967506 0.332102371257542 0.341976237744437 0.341350929159916 0.343347490061122 0.333889656544639 0.33759764892615 0.331867628472579 0.336246733620957 0.371030543656330 0.352065762247218 0.334020719947265 0.331211144143714 0.336330703186002 0.331211144143714 0.362613402619606 0.331988315373260 0.34240784610293 0.33154991159848 0.339011772033138 2 2 + 16774024 16774875 16774377.182 16772998 16776346 + gene protein_coding_gene FALSE TRUE AT2G40130.1|AT2G40130.2 heat shock protein-related similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT2G29970.1); similar to Os11g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065527.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91056.1); similar to Os12g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065925.1); contains domain ATP-DEPENDENT CLP PROTEASE (PTHR11638); contains domain ATP-DEPENDENT CLP PROTEASE-RELATED (PTHR11638:SF1); contains domain Double Clp-N motif (SSF81923)|similar to ATP-dependent Clp protease ClpB protein-related [Arabidopsis thaliana] (TAIR:AT1G07200.2); similar to Os12g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065925.1); similar to 101 kDa heat shock protein; HSP101-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05509.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093) 1.58720643617731 10.9404729791687 3.29708317148287e-07 0.00506959508447206 10.6706086777731 9.8349881847099 1.58720643617731 0.198476010204095 AT1G77510_at 10.1295907198854 10.1822116619609 10.8379915997629 10.5685577634635 9.86023985412348 9.2603801769704 7.27657013832912 7.43448854204218 6.43870598439064 6.01825583408387 6.83626320329543 7.23938374604086 7.24108042443742 7.19055440138416 7.19235414500498 7.1385054402316 7.1518459376175 6.64497125032848 5.83402716828179 0.235705280510855 0.235878503510739 0.237474193025868 0.236107521193214 0.239272672041747 0.234741705944712 0.240229692184691 0.233986941549042 0.240704547406332 0.235089813469416 0.232583640066410 0.238059433186458 0.238406686703954 0.232583640066410 0.243008196932752 0.232583640066410 0.237012894149788 0.243010438502719 0.240812196431138 1 1 + 29133506 29134301 29133921.455 29131544 29134506 + gene protein_coding_gene FALSE TRUE AT1G77510.1 ATPDIL1-2 (PDI-LIKE 1-2); protein disulfide isomerase Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Identical to Probable protein disulfide-isomerase 2 precursor (EC 5.3.4.1) (PDI 2) [Arabidopsis Thaliana] (GB:Q9SRG3); similar to ATPDIL1-1 (PDI-LIKE 1-1), protein disulfide isomerase [Arabidopsis thaliana] (TAIR:AT1G21750.1); similar to Protein disulfide-isomerase precursor (PDI) (GB:P29828); similar to putative endomembrane protein; putative (GB:AAA32662.1); similar to protein disulfide isomerase [Brassica carinata] (GB:ABB17025.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Endoplasmic reticulum targeting sequence; (InterPro:IPR000886); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792) 1.17922528632474 10.9338738910921 3.31712382256126e-07 0.00510007787718793 10.6672155629333 16.0319368807979 1.17922528632474 0.117388402425538 AT1G57630_at 5.53544572310627 6.00134975555931 7.87593428777627 8.03690090711099 4.48820871949735 4.61381474422996 1.60179547907864 1.60581490784972 2.91936995255745 2.08647311506736 1.33194917411269 1.67438730772575 0.952424703017296 1.96946731572904 2.05482529817108 1.71277778389315 1.76804573916329 1.48400952604742 1.19061190539471 0.417395330795695 0.411139130833676 0.419957549996714 0.424830136831863 0.400807745191114 0.399948964951301 0.404667857307207 0.394867325803981 0.398498166457089 0.394867325803981 0.394867325803981 0.394867325803981 0.396179151490568 0.394867325803981 0.397977297533248 0.394867325803981 0.40550647872548 0.396949777638251 0.394867325803981 1 1 + 21349346 21349797 21349544.182 21349304 21349822 + gene protein_coding_gene FALSE TRUE AT1G57630.1 disease resistance protein (TIR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G25510.1); similar to disease resistance-like protein 9 [Brassica rapa] (GB:AAV88086.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) 1.06030703161555 10.9275607376482 3.33641979877147e-07 0.00512941179863126 10.6639661724389 6.81189348902055 1.06030703161555 0.0880319139929915 AT2G05790_at 7.84228165329684 8.42746021732841 4.00044174510823 4.18875500072261 6.65714781444775 6.63394189774363 7.80136514710741 8.10768390052938 8.41212579944022 8.14334546942045 9.33832601817743 9.30580780797723 8.69372692436562 8.89656689658178 9.2880934073244 8.49901501083725 7.08111248553387 8.70837351615892 8.70581790254653 0.195333223403207 0.197186751412743 0.237689791593133 0.259450682427931 0.209905631946883 0.202039692085191 0.206641595572140 0.196202862369066 0.210877842580478 0.197580178479637 0.199775739266359 0.201802410814207 0.199366513881131 0.20948071567752 0.196219239104569 0.195861976455975 0.212826619244895 0.195648131788039 0.194173742533923 2 2 + 2200391 2200889 2200646 2199216 2201481 + gene protein_coding_gene FALSE TRUE AT2G05790.1 glycosyl hydrolase family 17 protein similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT5G55180.1); similar to Glycoside hydrolase, family 17 [Medicago truncatula] (GB:ABE77964.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.18433904024640 -10.9187794574705 3.36346219910367e-07 0.00517065043868207 10.6594410645118 15.2807884131215 -1.18433904024640 0.118925895651139 AT3G26440_at 6.00608292022934 5.70529239526049 7.685246271519 7.68498955112932 5.31912948779545 5.0980353797139 2.38053517638824 2.52611959067189 2.54441971875631 2.68651065211451 2.43443054432356 2.45969954460031 2.33403654195194 2.39477837626046 2.31717606583984 2.50808590132774 2.72147264313916 2.2536446522237 2.95093101387680 0.292585980001492 0.285260317911252 0.30203249793019 0.302318821089953 0.294862610986248 0.286196615838612 0.27212286369027 0.277725436059200 0.27212286369027 0.27212286369027 0.274446868026605 0.290028417900665 0.287592381161830 0.281111575869489 0.280874231505576 0.27212286369027 0.27212286369027 0.272547587021974 0.274304862322453 3 3|0 +|/ 9679760 9680893 9680225.333 9677886 9681137 + gene protein_coding_gene FALSE TRUE AT3G26440.1|AT3G26440.2|AT3G26440.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13000.2); similar to Protein of unknown function DUF707 [Medicago truncatula] (GB:ABE91787.1); contains InterPro domain Protein of unknown function DUF707; (InterPro:IPR007877) 0.996485528680532 10.915753481459 3.37283582986371e-07 0.0051847232376665 10.6578802910403 7.87828017756722 0.996485528680532 0.069341263746579 AT3G23430_at 4.50245274749638 4.26801363459938 3.19342555672443 3.23110279169870 2.63433920835814 2.34654688654588 5.79882662495758 5.15817388877052 2.84552061473652 3.66648061465395 3.15733084222616 3.56370671618172 2.58803489948021 3.47876609340125 2.84299966563551 2.60174346926982 3.85927730812888 2.95741268158666 3.99072787681233 0.255262362591775 0.246420393456414 0.259073030381491 0.249399033734226 0.24785611766749 0.262652215097251 0.259055023877254 0.263217001601927 0.259013103002744 0.244705488489874 0.244705488489874 0.244705488489874 0.244705488489874 0.24869604750863 0.251804500382785 0.246250494297606 0.262948980859910 0.246921021273347 0.248937595455445 3 0|3 /|- 8388004 8388710 8388312.333 8387515 8393303 - gene protein_coding_gene FALSE TRUE AT3G23430.1 PHO1 (PHOSPHATE 1) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. Identical to Putative phosphate transporter 1 (PHO1) [Arabidopsis Thaliana] (GB:Q8S403;GB:Q9LW54); similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT1G68740.1); similar to putative PHO1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD44936.1); similar to Os06g0493600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057682.1); similar to Os02g0809800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048464.1); contains InterPro domain SPX, N-terminal; (InterPro:IPR004331); contains InterPro domain EXS, C-terminal; (InterPro:IPR004342) -1.2251319278515 -10.9069149922681 3.40037758113533e-07 0.00522672037996312 10.6533172140783 7.20764449817206 -1.2251319278515 0.128298953422626 AT3G50060_at 2.73445839267057 2.45549440193812 2.85956207246122 2.73260533901841 2.35488178626124 2.02254531464305 4.00464683533227 3.9779998371378 6.28108501128519 5.06768118930952 5.45371511014253 4.83483519764005 4.06401191772357 4.86851041897796 3.99578531654846 3.98921504787701 3.4322710796265 4.27162505340512 5.47708391008315 0.265082454483563 0.260147964157509 0.26903255716194 0.257617279733593 0.265188229573988 0.27178624091183 0.255813419301042 0.255813419301042 0.262280698027740 0.275329948954689 0.264676451753075 0.258546473924482 0.256439648909093 0.26666573351639 0.266352916470343 0.257324096541543 0.273198705180023 0.260573366936842 0.269196680683171 3 3 - 18569164 18569681 18569466.182 18568955 18570089 - gene protein_coding_gene FALSE TRUE AT3G50060.1 myb family transcription factor Member of the R2R3 factor gene family. similar to AtMYB44/AtMYBr1 (myb domain protein 44, myb domain protein r1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67300.1); similar to MYB6 [Malus x domestica] (GB:AAZ20429.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.02281089974517 -10.8883460289729 3.45903827630136e-07 0.00531654183067519 10.6437098535178 7.8789556705838 -1.02281089974517 0.078372273701268 AT2G21540_at 4.33071925880467 4.14462473139487 2.7305167523493 2.7512046562772 2.94595150887718 2.7727169176256 5.9866927745001 6.16168622238422 6.72407033630425 6.04588807069997 8.33395943727976 7.6141588377546 5.72234610414447 7.43701817431421 7.1203983511452 5.36565574679054 4.76654632225013 7.74308889417661 6.15116931431213 0.211859914654648 0.214295251910722 0.221611751869105 0.231198834650676 0.216693206362032 0.225004510282813 0.220461576929885 0.220672020083948 0.227100594831979 0.215891244547002 0.214530016135279 0.214953931646453 0.219050123789234 0.213639414272588 0.220382836651440 0.211859914654648 0.216082723808999 0.215676486725809 0.214116142618999 2 2 - 9228068 9228857 9228513.545 9227629 9231576 - gene protein_coding_gene FALSE TRUE AT2G21540.1|AT2G21540.2 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative|phosphatidylinositol transporter similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT4G36490.1); similar to transporter [Arabidopsis thaliana] (TAIR:AT4G34580.1); similar to SEC14 (secretion 14) [Arabidopsis thaliana] (TAIR:AT4G39180.1); similar to Cellular retinaldehyde-binding/triple function, N-terminal [Medicago truncatula] (GB:ABE79641.1); similar to Cellular retinaldehyde-binding/triple function, N-terminal [Medicago truncatula] (GB:ABE85401.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071) -0.949989689139414 -10.8831181687102 3.47575074473716e-07 0.00534188131958654 10.6409999512196 10.5129836314037 -0.949989689139414 0.0535329695057732 AT1G05575_at 5.0949604083098 5.54109220421735 4.82902650092497 4.97527160029045 6.19962950831832 5.5421427608408 1.47029684721896 1.72950724968042 1.83507429216076 1.87837216109184 2.08280066688714 3.11571070640044 2.07785972223212 2.82201830823678 2.29390482231953 1.7622474476864 2.41889552978273 2.18437488980762 1.27114041289868 0.251657027224168 0.270772149561591 0.255512213533754 0.252934050694657 0.258885307357441 0.261520311679674 0.251507533178684 0.251069472932653 0.248752684268861 0.250374584267388 0.247669132702996 0.247669132702996 0.25290938144494 0.248717633086571 0.252722427451399 0.248017116736702 0.260880404696187 0.247669132702996 0.247669132702996 1 1 - 1661834 1662016 1661943.545 1661690 1662186 - gene protein_coding_gene FALSE TRUE AT1G05575.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31945.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD38225.1); similar to Os06g0207200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057099.1); similar to Os02g0774200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048273.1) 1.30537548576117 10.8437084485956 3.60458981120750e-07 0.00553953362186368 10.6204996553952 6.42586861850156 1.30537548576117 0.146831560411288 AT3G13100_at 4.56296861906898 5.12955068983395 7.23556479516835 7.41149770000433 4.28197459814017 4.30996200345845 2.36518956987466 2.08217232498949 2.07294589150647 2.45283421505172 2.31079977220875 2.23921870449674 2.26163035094005 2.59240702458519 1.91822726774914 2.55561936303188 2.68775342101999 2.05485311681976 2.35547821414053 0.217062690616791 0.224118460510503 0.217171915716266 0.234079507745704 0.212955541049063 0.226866460391365 0.198660613190491 0.210150013563836 0.200591946287891 0.204065415670065 0.200204071564857 0.201908338640022 0.206209606658127 0.198063459364396 0.198063459364396 0.204135667090538 0.205638872422204 0.204130606946992 0.202484574194912 3 3|0 -|/ 4208903 4209642 4209175 4208742 4214180 - gene protein_coding_gene FALSE TRUE AT3G13100.1 ATMRP7 (Arabidopsis thaliana multidrug resistance-associated protein 7) member of MRP subfamily Identical to Multidrug resistance-associated protein 7 (EC 3.6.3.44) (Glutathione S-conjugate-transporting ATPase 7) (ATP-energized glutathione S- conjugate pump 7) (MRP7) [Arabidopsis Thaliana] (GB:Q9LK62;GB:Q8LGU0); similar to ATMRP3 (Arabidopsis thaliana multidrug resistance-associated protein 3) [Arabidopsis thaliana] (TAIR:AT3G13080.1); similar to ATMRP5 (Arabidopsis thaliana multidrug resistance-associated protein 5) [Arabidopsis thaliana] (TAIR:AT1G04120.1); similar to ATMRP8 (Arabidopsis thaliana multidrug resistance-associated protein 8) [Arabidopsis thaliana] (TAIR:AT3G13090.1); similar to multidrug resistance-associated protein [Thlaspi caerulescens] (GB:BAD11207.1); similar to putative MRP-like ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAB62557.1); similar to Multidrug resistance-associated protein 8 (Glutathione S-conjugate-transporting ATPase 8) (ATP-ener (GB:Q8VZZ4); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.15429516364563 10.8436445598979 3.60480283475408e-07 0.00553953362186368 10.6204663180964 6.98301823815364 1.15429516364563 0.113854935403755 AT4G30160_at 3.36217935695418 3.83170568611603 4.13145537288676 4.31614874698521 3.81672940074596 4.28838976949146 3.69283233997474 4.10386496953194 2.96535859155466 3.73651022263105 6.28615418945365 6.30337011771632 5.50711082739876 5.7276986486532 6.12729368322137 5.55613513995911 5.41029850925485 4.44951717946975 3.87727224332660 0.267006425381082 0.27066849743396 0.275010972691809 0.275855195260117 0.264174438282786 0.274416902600257 0.271302476974764 0.271254959205827 0.28025093984277 0.266862267855120 0.276979709256925 0.264174438282786 0.267393231386309 0.284680949518209 0.280947943496816 0.270195919197561 0.278738309998956 0.276287148907113 0.264572900697334 4 4|0 +|/ 14758661 14759257 14758917.333 14753438 14760195 + gene protein_coding_gene FALSE TRUE AT4G30160.1 VLN4 (ARABIDOPSIS THALIANA VILLIN 4); actin binding Arabidopsis thaliana VILLIN4 Identical to Villin-4 (VLN4) [Arabidopsis Thaliana] (GB:O65570;GB:Q9SZW9); similar to villin, putative [Arabidopsis thaliana] (TAIR:AT5G57320.1); similar to VLN3 (VILLIN 3), actin binding [Arabidopsis thaliana] (TAIR:AT3G57410.1); similar to VLN2 (VILLIN 2), actin binding [Arabidopsis thaliana] (TAIR:AT2G41740.1); similar to putative villin [Oryza sativa (japonica cultivar-group)] (GB:BAD05388.1); similar to actin filament bundling protein P-115-ABP [Lilium lon (GB:BAC77209.1); similar to Villin headpiece; Gelsolin re (GB:ABE83995.1); contains InterPro domain Gelsolin; (InterPro:IPR007122); contains InterPro domain Gelsolin region; (InterPro:IPR007123); contains InterPro domain Villin headpiece; (InterPro:IPR003128) 1.26755108438495 10.8382261683843 3.62291909440947e-07 0.00556697748046959 10.617637764797 8.54157702503328 1.26755108438495 0.139088797471426 AT3G47600_at 3.51209919843382 4.32333967847039 5.42915999353895 5.95818084346182 6.3700345710832 6.42231475269606 4.57852015207412 4.41607235618247 3.33581767485050 3.91477373413441 4.7642306034798 4.01368664069323 5.40795853593225 4.36114674567252 3.90377611763624 4.82235897415207 5.38114325958285 5.03824701787927 3.86656259164572 0.225892418723305 0.218532576266596 0.23297285901947 0.227842114721904 0.219078440995273 0.234355031712963 0.220141249004042 0.220939008082567 0.250474209109787 0.226778232997943 0.227296357291661 0.22256531056572 0.223351727181499 0.225526225059621 0.223363128478137 0.221471114779635 0.23664184576033 0.225069945354961 0.222272160522678 3 3 - 17550693 17551166 17550923.909 17550323 17552215 - gene protein_coding_gene FALSE TRUE AT3G47600.1 MYB94 (myb domain protein 94); DNA binding / transcription factor Encodes a putative transcription factor (MYB94). similar to MYB96 (myb domain protein 96), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62470.2); similar to MYB60-like protein [Vitis vinifera] (GB:ABK59040.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.42163259028656 10.8357586242930 3.63120195903191e-07 0.00557934181005253 10.6163488364957 9.33485843678697 1.42163259028656 0.170183814676176 AT3G63010_at 5.73254946561743 5.6548833544889 7.1560714291165 7.3945614641486 5.27239554854675 5.79722613406266 2.72723024622896 3.04817691607798 1.90115365218135 2.06787216554993 1.61642239374746 2.01260275193509 2.31106365319417 1.84185020459925 2.0026169141871 2.47245379279184 2.27042197020238 2.22917853936505 1.70970715124899 0.280995821163164 0.272816554643529 0.283173593836109 0.27390072786305 0.261886594244938 0.281093324585929 0.260323538149442 0.254777378265805 0.259233739584268 0.254970277164892 0.259280145857101 0.253675517983518 0.25980236414254 0.252746849652443 0.254866600416837 0.260567850978930 0.252746849652443 0.259086364769746 0.256962522712939 3 3 + 23301374 23301854 23301567.455 23300400 23302461 + gene protein_coding_gene FALSE TRUE AT3G63010.1 ATGID1B/GID1B (GA INSENSITIVE DWARF1B) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. Identical to Probable gibberellin receptor GID1L2 (EC 3.-.-.-) (GID1-like protein 2) (GID1L2) [Arabidopsis Thaliana] (GB:Q9LYC1); similar to ATGID1A/GID1A (GA INSENSITIVE DWARF1A) [Arabidopsis thaliana] (TAIR:AT3G05120.1); similar to ATGID1C/GID1C (GA INSENSITIVE DWARF1C) [Arabidopsis thaliana] (TAIR:AT5G27320.1); similar to (GB:ABG89394.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.15800946810401 10.8338230533984 3.6377135051185e-07 0.00558898302926406 10.6153374349575 7.34163045336741 1.15800946810401 0.114969192489038 AT1G01390_at 6.3520864491554 6.46735683951863 5.88587777155499 6.17467367335289 5.83943443460419 5.86993095172399 8.60594904867064 8.53986183973154 4.00554774509698 4.752183681792 3.32134992609302 3.59239894358682 4.6506213521887 4.14980137093985 2.60579694284819 4.8340848778162 5.45913664192204 3.43791909972735 4.30120614609843 0.251718259449730 0.251877619131163 0.254873712541494 0.245399678470701 0.253239741420376 0.264041224869013 0.267883881982218 0.263384944278783 0.25893834341619 0.256892567239591 0.253886049543885 0.254576257282084 0.253548984703136 0.246973610373526 0.257639340375516 0.248333703606106 0.253651501048185 0.246236582604008 0.261426866243792 1 1 - 148322 148878 148638.273 148120 149806 - gene protein_coding_gene FALSE TRUE AT1G01390.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G01420.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT4G01070.1); similar to Hydroquinone glucosyltransferase (Arbutin synthase) (GB:Q9AR73); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.947712441532786 -10.8079840069427 3.72586311615734e-07 0.00572404350535253 10.6018060557593 10.8965802937321 -0.947712441532786 0.0552659470790468 AT4G20140_at 1.85511767638322 1.97918675167685 2.67818666862882 2.92806013798610 3.33721952488204 3.51514841370457 1.88925702937906 2.10417824604393 2.17768990630404 2.76870747919913 3.08167496583937 3.89126431652665 3.21152515448424 3.44200852952699 3.38131733103257 3.53151263530765 2.92278521938551 3.17065787993545 2.61911140324082 0.208214619013735 0.210626171385267 0.202889309248607 0.209533991167016 0.202889309248607 0.205782218845219 0.206276287060584 0.212922230567556 0.211033985254363 0.213178688927298 0.206537088561663 0.202889309248607 0.202889309248607 0.204217822759673 0.221302616466443 0.208048682277858 0.208002075492938 0.203112110025852 0.202889309248607 4 4 + 10887439 10887999 10887721.182 10884207 10888280 + gene protein_coding_gene FALSE TRUE AT4G20140.1 leucine-rich repeat transmembrane protein kinase, putative similar to EDA23 (embryo sac development arrest 23), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G44700.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G33170.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63930.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU44328.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to putative LRR receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84715.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.982487875759878 10.7972271869153 3.76324025050965e-07 0.00578108967283293 10.5961566559428 5.46125906454531 0.982487875759878 0.068280911179682 AT1G57590_at 5.56885520661308 5.71750443247314 8.43123802118061 8.42353311784975 7.78632690469449 7.17537137142449 7.80255944544737 7.68144917100789 4.76032718715931 6.32524312248913 6.68355773383281 4.52670978290704 6.82756061052825 6.85854983482754 4.25586596859644 6.11774976911804 7.77350011608666 6.73823114093286 4.54981649743598 0.216594189921485 0.212601074712135 0.218298093694193 0.218857677923005 0.219443694160640 0.216497592480631 0.213551971536014 0.214384687342408 0.239715866104653 0.221672797927327 0.214825375434649 0.225756610015737 0.218105392339356 0.216419369091155 0.232162388975809 0.214439801510826 0.220551130976154 0.22455847549854 0.222051691825100 1 1|0 -|/ 21331159 21332273 21331764.4 21331025 21333428 - gene protein_coding_gene FALSE TRUE AT1G57590.1 carboxylic ester hydrolase similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT5G26670.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34280.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 1.13622265357210 10.7938729421563 3.77497836365181e-07 0.00579874426440554 10.5943930708061 13.0406103198189 1.13622265357210 0.110821255776710 AT2G22450_at 8.39035499136896 8.17977511206303 7.33400250152191 7.42686469477086 9.0421209976815 8.4092244966546 5.39329249536342 4.39789285673874 4.62384891268196 4.1405150121227 6.37089024354595 5.91745868179738 6.03414888492023 6.23644315953492 6.42959482491721 4.94939669540578 5.60465555865401 5.9611876655489 3.73966028941612 0.243268444711857 0.245461345733456 0.240443391758036 0.235869363148169 0.244565945031907 0.249433843096493 0.238838695822746 0.240644165083844 0.24271444217583 0.244287513488191 0.233229859378169 0.231438166076194 0.237161001252268 0.239007738209084 0.236768805598795 0.232038864203421 0.248508750184093 0.236935710069107 0.250912312022508 2 2 + 9538937 9539745 9539380.818 9537627 9539994 + gene protein_coding_gene FALSE TRUE AT2G22450.1 riboflavin biosynthesis protein, putative similar to ATGCH (Arabidopsis thaliana GTP cyclohydrolase II), 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II [Arabidopsis thaliana] (TAIR:AT5G64300.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] (GB:AAQ03091.1); contains InterPro domain GTP cyclohydrolase II; (InterPro:IPR000926); contains InterPro domain 3,4-Dihydroxy-2-butanone 4-phosphate synthase; (InterPro:IPR000422) 1.61634410082865 10.7835203120142 3.81145820280004e-07 0.00585439979950086 10.5889440059014 12.3746810361191 1.61634410082865 0.207978711613613 AT1G68440_at 6.24769179339197 6.41688675226708 6.70481308831577 6.62419279695808 5.87472741568178 5.52756206788785 7.74707969326212 7.88058095736179 7.39003573283476 7.29647088544636 6.64711863149465 6.13401781750334 6.47934469826718 6.77719832508447 5.33579781100225 6.53272340895115 5.92443177210495 5.7658294586532 7.19457577597577 0.178008584922597 0.178008584922597 0.184427674725059 0.187284341116276 0.189612398676517 0.182371287517122 0.187788474940457 0.18136894040657 0.205553622913092 0.178167564248331 0.178008584922597 0.182566809460026 0.182531713120861 0.184714090744494 0.210617566567607 0.183144860714432 0.191211687309497 0.191020117474189 0.187386306215749 1 1 + 25662162 25662667 25662436.727 25661696 25662936 + gene protein_coding_gene FALSE TRUE AT1G68440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25400.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93249.1) -0.99218617394809 -10.7770717486709 3.83437423087191e-07 0.00588921538119616 10.5855453290794 13.3745677565416 -0.99218617394809 0.072077409101926 AT4G38620_at 5.75917965647276 6.22383837810203 6.76516722933853 7.00741944097678 7.34493203916271 7.10924162235715 5.58982700756573 5.37877364342028 5.52222018176413 5.90086120283767 6.66987508587693 6.97169484552249 6.566050701858 7.01115144288398 6.01296818975308 6.76167956735922 6.09651693546955 6.20483506922758 5.46690197343292 0.222820869724133 0.207958804098062 0.216339359110880 0.214026796132821 0.214378367864729 0.225112228322512 0.207958804098062 0.216616361162578 0.220641629854336 0.215917468474077 0.218787476806922 0.215304733735412 0.215423690136847 0.214977603333101 0.208621468874087 0.212726431265582 0.222327429364439 0.216294674077259 0.209179408193403 4 4 + 18054286 18054830 18054530.545 18053545 18054993 + gene protein_coding_gene FALSE TRUE AT4G38620.1 MYB4 (myb domain protein 4); transcription factor Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. Identical to Transcription repressor MYB4 (Myb-related protein 4) (AtMYB4) (MYB4) [Arabidopsis Thaliana] (GB:Q9SZP1;GB:O49774;GB:Q7DLI1); similar to AtMYB32 (myb domain protein 32), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34990.1); similar to GHMYB9 [Gossypium hirsutum] (GB:AAK19619.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.11281871931710 10.7625145120185 3.88665684496146e-07 0.0059691275824918 10.5778602951254 12.4807178433855 1.11281871931710 0.105929720735636 AT3G14990_at 10.0965489783968 10.0613892054007 10.3581781340541 10.3906633570673 10.4453234031305 10.0971630731042 7.65448422283516 6.89413321936188 6.15602336806259 7.15955295466042 7.17582357915408 8.30498360748869 7.81459249047227 7.48244709279754 7.57407384775728 8.81816583247369 7.62081520623086 7.90152225328872 7.41373694936145 0.20470797598506 0.200964770048221 0.200964770048221 0.201543950471076 0.200964770048221 0.201765490517507 0.202580990893654 0.205827900381119 0.226216235085354 0.205502616203738 0.200965962567141 0.208161378846658 0.200964770048221 0.206432426018669 0.204427384922136 0.200964770048221 0.203689307026170 0.206642241565501 0.207118239123543 3 0|3 /|+ 5048884 5049594 5049276.875 5047407 5049884 + gene protein_coding_gene FALSE TRUE AT3G14990.1|AT3G14990.2|AT3G14990.3 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative|catalytic similar to DJ-1 family protein [Arabidopsis thaliana] (TAIR:AT1G53280.1); similar to ThiJ-like protein [Brassica rapa subsp. pekinensis] (GB:AAP96742.1); contains InterPro domain DJ-1; (InterPro:IPR006287); contains InterPro domain ThiJ/PfpI; (InterPro:IPR002818) 1.28648749167672 10.7617073994701 3.88957813172014e-07 0.00597322513688261 10.5774336886183 16.8728974888702 1.28648749167672 0.144957507937306 AT1G04770_at 8.146761926629 8.45329312528331 8.13476721322337 8.17884940523555 8.30298534806654 7.96026610369102 8.93332791864354 8.75789618743029 7.37405207921258 8.60734900277926 6.76893139635182 5.38172028218376 6.35558495450955 6.82133156361433 4.78931287745528 6.1316627048363 6.67818774184171 5.66679842260927 7.15116409546494 0.215352751024624 0.220207079072511 0.215267835049899 0.219657418465272 0.219079419059481 0.226477459800781 0.22434404982099 0.217827149788969 0.227667259276754 0.216109732655332 0.215453470048853 0.235777318846032 0.228745297785264 0.227774821550606 0.240668860941922 0.218226198286395 0.215418170132239 0.237970428198415 0.218096833959807 1 1|0 -|/ 1336656 1337108 1336839.3 1336370 1337848 - gene protein_coding_gene FALSE TRUE AT1G04770.1 male sterility MS5 family protein similar to male sterility MS5 family protein [Arabidopsis thaliana] (TAIR:AT5G48850.1); similar to Os05g0506000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055980.1); similar to unknown [Oryza sativa] (GB:AAC72543.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -1.03263329408471 -10.7345855411849 3.98914107874221e-07 0.00612572504051653 10.5630665351421 15.2510415545641 -1.03263329408471 0.0855067608819189 AT4G25260_at 4.00148704354397 4.26829429628994 1.49327700058887 1.39251837311797 1.89190625971441 1.90359775006798 1.73630109392017 1.82973930233612 3.97370498601178 2.35586911583263 3.04730022077108 3.36131446608876 2.42756996677289 2.00081319657052 3.46261233844763 2.43074204993481 2.04247510604268 2.66311509431541 3.43672962902185 0.235613727984824 0.232993729701712 0.228384863887670 0.226669080552907 0.230675865707723 0.224268540173996 0.227303424739667 0.235868007526983 0.232926416622305 0.225278123901139 0.224075662995007 0.224779566609179 0.221759210646498 0.222174663343878 0.228769556781550 0.221759210646498 0.227400178800632 0.223200373273271 0.228110823769565 4 4 - 12936039 12936585 12936369.636 12935720 12936668 - gene protein_coding_gene FALSE TRUE AT4G25260.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.932286180118844 -10.7228900116954 4.03292434903231e-07 0.00619255533793911 10.5568520923223 5.28210383085913 -0.932286180118844 0.0519757232484086 AT4G12600_at 7.60173937516189 7.70070326673136 6.09854593950655 6.59385495747273 5.82293359513347 6.42478125130643 7.78965608868337 8.01412255882867 6.94445015961364 6.99103297336665 6.00485751519707 6.8905637570604 5.39005989259937 6.06842057619146 6.55454093776923 5.42299585496882 5.98049653555292 5.23140791459033 6.85279689279298 0.188766846858390 0.188316244790189 0.183268639379138 0.183268639379138 0.199903899888829 0.195028817505938 0.187761101931549 0.191080500281903 0.191150523970403 0.185962211636024 0.202175549188802 0.185698671759427 0.190499448604138 0.191004718491131 0.191530915162523 0.188000666945096 0.192488896636794 0.196396765303917 0.187205031583717 4 4 + 7453324 7454179 7453860.182 7453199 7454478 + gene protein_coding_gene FALSE TRUE AT4G12600.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT5G20160.1); similar to Os03g0241200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049514.1); similar to ribosomal protein L7 [Hyacinthus orientalis] (GB:AAT08750.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7AE; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038) -1.26401759438154 -10.7146208693360 4.06419488993542e-07 0.00624016483400685 10.5524513322334 13.4419644032275 -1.26401759438154 0.141411253222686 AT3G28950_at 8.12611220468834 8.06570144496573 8.98579509407457 8.80707211617591 9.10804630880675 8.53464625876178 7.5158472573091 7.2174743888196 6.03999646634206 6.7414599574546 7.8313980949409 7.58624470868162 7.92780854925363 7.42801455273641 7.36975543682767 7.7663689494778 7.70482125875798 7.47273626408038 6.61658701947138 0.235034189560974 0.226264750473989 0.235689252209225 0.230795277246618 0.231995437193658 0.235018985241053 0.226264750473989 0.235788415827364 0.260045284504736 0.238007523597183 0.232346273324201 0.229726820318039 0.226640106439952 0.250773503550352 0.229319252192940 0.226264750473989 0.243751582448174 0.240270161755337 0.234087423474649 3 3|0 -|/ 10977611 10978567 10978210.3 10977345 10978729 - gene protein_coding_gene FALSE TRUE AT3G28950.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative [Arabidopsis thaliana] (TAIR:AT3G28940.1); similar to Os06g0702700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058493.1); similar to hypothetical protein SNOG_11054 [Phaeosphaeria nodorum SN15] (GB:EAT81553.1); similar to predicted protein [Asper (GB:XP_001216716.1); contains InterPro domain AIG2-like; (InterPro:IPR009288) 1.14874255813214 10.6853114366547 4.17716580168462e-07 0.0064132026553264 10.5368067237202 15.3460408631672 1.14874255813214 0.116527016613870 AT1G04710_at 6.97306321167143 6.74737411870772 5.84711816282388 5.7902390946708 6.22813634327963 6.10472360033427 7.64462437523436 7.56134397939244 6.27939295845303 7.24330806260906 5.11985622860311 6.24189577016035 6.24515733436526 6.1269874306746 6.3302697288345 6.18805420217753 6.13658118634794 6.18246207364397 6.49054930572403 0.197700128620168 0.196226934108154 0.200678217803686 0.206365876243757 0.195066065102155 0.206125423030567 0.205391415659068 0.194977512492331 0.205384510847069 0.196723897118949 0.203006231266259 0.204541549937478 0.196002651123064 0.199812221657846 0.204405919965922 0.194968823137115 0.200900547754143 0.201123872795170 0.198449912073398 1 1|0 +|/ 1323558 1324529 1324050.3 1321903 1324779 + gene protein_coding_gene FALSE TRUE AT1G04710.1 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative Identical to 3-ketoacyl-CoA thiolase 1, peroxisomal precursor (EC 2.3.1.16) (Beta- ketothiolase 1) (Acetyl-CoA acyltransferase 1) (Peroxisomal 3-oxoacyl- CoA thiolase 1) (KAT1) [Arabidopsis Thaliana] (GB:Q8LF48;GB:O23014;GB:Q8LPI4); similar to KAT5/PKT1/PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 1, PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT5G48880.3); similar to PED1 (PEROXISOME DEFECTIVE 1), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT2G33150.1); similar to 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis sativus] (GB:CAA47926.1); similar to acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit (GB:S72532); similar to glyoxysomal beta-ketoacyl-thiolase [Brassica napus] (GB:CAA63598.1); contains InterPro domain Thiolase; (InterPro:IPR002155) -0.91936128444274 -10.6826672835040 4.18752363694870e-07 0.00642868628744365 10.5353917757116 12.9833235790708 -0.91936128444274 0.0478135738466197 AT3G17170_at 7.09899800448995 7.15383570729317 6.29047206612116 6.13147848101054 6.93518495038051 6.46437457601787 7.08967914683673 7.01324040786658 7.04561342778613 7.33704233119606 4.78325645337687 6.19649407878939 5.43490263837799 5.05924905867923 6.78951439074403 6.03340598032235 6.08370769695768 5.67346859017734 7.19066903316765 0.213353934921949 0.206874934213316 0.210010663885716 0.215498512480054 0.208369960546468 0.216812570469367 0.212162767664661 0.222561869224444 0.210315916739035 0.210536736154121 0.219525689751919 0.209553909449201 0.207120417444601 0.209785973668395 0.21439286563921 0.205370907374942 0.211417100229708 0.21410854295662 0.212487674739668 3 0|3 /|- 5853311 5853866 5853555.5 5853065 5854912 - gene protein_coding_gene FALSE TRUE AT3G17170.1 RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03710.1); similar to ribosomal protein S6 containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98957.2); contains InterPro domain Ribosomal protein S6; (InterPro:IPR000529) -1.03395960068046 -10.6746279696350 4.2191870940457e-07 0.00647687410806956 10.5310861154532 13.2460869799911 -1.03395960068046 0.0875238266152696 AT1G22650_at 6.09279866132694 5.81159743021751 5.73539100770232 5.68330719106158 4.45893033735645 4.55623269574119 6.25400955162434 6.3111346586819 5.41721718716947 4.7003661687935 4.12889200034686 4.87198601494595 3.61402265554002 4.28159338374496 3.99707486259181 3.90956754627329 4.16240890463147 5.07594348451026 5.19455936262093 0.208093184352808 0.204855768249694 0.208779550604867 0.202759730060388 0.205603060445841 0.210403352653988 0.202759730060388 0.204641523017702 0.208248890784691 0.210308653634888 0.205579346975246 0.203578106022426 0.211266726205727 0.208419344805381 0.217087305415031 0.237752157935882 0.206790151326777 0.205288051575098 0.202759730060388 1 1|0 -|/ 8013722 8014386 8014180.3 8013371 8015980 - gene protein_coding_gene FALSE TRUE AT1G22650.1 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT4G09510.1); similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT1G72000.1); similar to CINV1 (CYTOSOLIC INVERTASE 1), beta-fructofuranosidase [Arabidopsis thaliana] (TAIR:AT1G35580.2); similar to putative neutral/alkaline invertase [Lotus japonicus] (GB:CAG30577.1); similar to Plant neutral invertase [Medicago truncatula] (GB:ABE77865.1); similar to neutral/alkaline invertase [Manihot esculenta] (GB:ABA08442.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Plant neutral invertase; (InterPro:IPR006937) -0.928890616892753 -10.6504447458649 4.3160093635913e-07 0.00662507437311264 10.5181011138504 10.2925420314312 -0.928890616892753 0.0532035119864614 AT3G09020_at 5.97303965315056 6.32737666084099 6.67473401784732 7.00704378507544 6.91992355739567 6.76885461279468 2.48874831033640 2.55416649928578 4.14474707359941 3.14950279896798 2.56233830341866 2.52709487901112 3.34743158390309 3.36644722562567 1.76410475570902 3.0831394304904 4.14277462029519 2.85817214487551 2.88184065113851 0.327816494468766 0.329325101880024 0.325167789455738 0.331694605732393 0.325262967776902 0.341347840422790 0.323623937516626 0.317009190895996 0.327630195323853 0.316494102298296 0.322351096553248 0.316494102298296 0.31876048496773 0.322441351287145 0.320996547690492 0.316494102298296 0.320172489511050 0.318923644809997 0.32070155160214 3 3 + 2753963 2754310 2754138.273 2753312 2754626 + gene protein_coding_gene FALSE TRUE AT3G09020.1 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein similar to alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G01250.1); similar to Glycosyltransferase sugar-binding re (GB:ABD28693.1); contains InterPro domain Glycosyltransferase sugar-binding region containing DXD motif; (InterPro:IPR007577); contains InterPro domain Alpha 1,4-glycosyltransferase conserved region; (InterPro:IPR007652) 1.03560695286115 10.6461699859238 4.33337334044721e-07 0.00665129474025242 10.5158006413854 8.7634699083332 1.03560695286115 0.088763018582263 AT2G28660_at 5.32507747449806 5.35281899341369 4.52604600426539 4.55267778576986 6.50597638393518 6.13158158371954 3.61580610326855 3.22734469377987 2.12972391585246 2.82905675905962 3.46637047928923 3.53682181744842 2.75582449461377 3.26415282889718 3.57055176899867 3.13893111664098 4.22017994280561 3.88464430139681 2.32120230307676 0.279868947662289 0.274101646927473 0.272910137246676 0.279776759031256 0.270478747471815 0.277371953141073 0.273386666404635 0.274628626663653 0.275235360888527 0.27496202398484 0.273059924936031 0.269116445981971 0.271162280397045 0.269494862733182 0.272871769781566 0.272170021987451 0.268636049719714 0.280524770815425 0.270689029528766 2 2 + 12302636 12303989 12302999.818 12302404 12304194 + gene protein_coding_gene FALSE TRUE AT2G28660.1 copper-binding family protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G53530.1); similar to Os03g0819400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051712.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS75224.1); similar to Os01g0976300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045566.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.05091611214042 10.6229895548731 4.42885990988373e-07 0.00679741418968954 10.5032988946008 7.8578389210434 1.05091611214042 0.0936020309025197 AT4G29820_at 6.46943313182536 6.68268243266613 7.54378017291676 7.65846141175797 8.07488227157443 7.93616783752445 5.0312363872194 5.56081944467039 3.75625989001079 4.31546368967408 4.54774738550016 4.01415383697352 4.96996689698376 4.21265903570596 4.19997873235828 4.74608628809863 5.06965372505308 4.24967649454572 4.50679863702196 0.281404041482502 0.261840373956921 0.269556975144182 0.269820855688054 0.267453055563853 0.283956214961469 0.268744585718058 0.268856694113601 0.26991670379676 0.266324917445811 0.266111298174834 0.269331881115015 0.267039755832283 0.261840373956921 0.262173614519188 0.263529283207187 0.276771104912161 0.279890852594947 0.266630771883584 4 4|0 -|/ 14596068 14597207 14596537.7 14595686 14597487 - gene protein_coding_gene FALSE TRUE AT4G29820.1 ATCFIM-25/CFIM-25 (ARABIDOPSIS HOMOLOG OF CFIM-25) Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25550.1); similar to Os08g0398800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061747.1); similar to H0124B04.17 [Oryza sativa (indica cultivar-group)] (GB:CAJ86300.1); contains domain PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT (PTHR13047:SF2); contains domain PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT (PTHR13047); contains domain no description (G3D.3.90.79.10); contains domain Nudix (SSF55811) 1.08783981742410 10.6106929373010 4.48043682929405e-07 0.00687612640191758 10.4966483931984 11.2167234054217 1.08783981742410 0.103591244473824 AT3G46900_at 6.07891363296678 6.12043790048988 4.39394565137194 4.24756068287915 5.28656004298913 5.20149546350619 5.97323643816547 6.32679295991309 4.81329941095385 5.39065451669313 3.32443863655198 3.73377582263525 5.43705219550506 4.27650964410786 2.79921185175047 6.33881730255004 6.02202875095533 3.49916490758436 4.82634914993177 0.292801574898091 0.292801574898091 0.292801574898091 0.292801574898091 0.292801574898091 0.295154416394659 0.292801574898091 0.292801574898091 0.294350293967314 0.297415971125811 0.297583418729056 0.297727509620446 0.292801574898091 0.292801574898091 0.313157334730617 0.299317248527072 0.292808576160658 0.309699792489974 0.293623263604166 3 3 + 17279999 17280292 17280156.273 17279860 17280495 + gene protein_coding_gene FALSE TRUE AT3G46900.1 COPT2 (Copper transporter 2); copper ion transporter encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast similar to copper transporter, putative [Arabidopsis thaliana] (TAIR:AT2G26975.1); similar to putative copper transporter protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56072.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) -0.96184045480087 -10.5723478621422 4.64549615511971e-07 0.0071289783996467 10.4758264672059 10.1731058039425 -0.96184045480087 0.0682175734989552 AT4G16155_at 6.51467356446901 6.63658798742897 4.56440026174808 4.00112903303395 4.71924766947237 5.03947268695435 7.61491750120266 7.49041772193674 6.83739216784288 7.64173491866859 7.53406133733939 7.88624770774215 6.7487529818294 7.12349808458322 8.53294347271541 6.83667267780739 7.02274429931214 7.48195758638775 7.06717093365161 0.229206420332373 0.228670042905603 0.241603582127201 0.253286258158345 0.241586165994470 0.242955928036943 0.242587521767586 0.239036143436183 0.258997678667702 0.231424676383248 0.228670042905603 0.229077738338914 0.228670042905603 0.234766495608859 0.233912745625023 0.237021607925711 0.246312965384860 0.238957474693100 0.239260615048111 4 0|4 /|- 9153609 9154582 9154080.875 9153379 9157278 - gene protein_coding_gene FALSE TRUE AT4G16155.1 dihydrolipoamide dehydrogenase 2, plastidic / lipoamide dehydrogenase 2 (PTLPD2) similar to LPD1 (LIPOAMIDE DEHYDROGENASE 1) [Arabidopsis thaliana] (TAIR:AT3G16950.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I [Medicago truncatula] (GB:ABD32316.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I [Medicago truncatula] (GB:ABE83195.1); similar to Pyridine nucleotide-disulphide oxidoreductase (ISS) [Ostreococcus tauri] (GB:CAL51905.1); contains InterPro domain Dihydrolipoamide dehydrogenase; (InterPro:IPR006258); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Mercuric reductase; (InterPro:IPR000815); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I, active site; (InterPro:IPR012999); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase dimerisation region; (InterPro:IPR004099); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) -1.13466317627346 -10.5705895276328 4.65322143027709e-07 0.0071403682847602 10.4748686290473 13.1115853575402 -1.13466317627346 0.116112052959808 AT1G23480_at 2.59909722712135 3.36556141291843 0.960291390332858 1.05405615014554 2.25397083255257 1.83066787174794 3.91340944782876 4.1369287238022 5.62479014778088 4.13385961095415 5.56625839273687 4.93688702515101 4.49954042702111 4.59065580242863 4.25104218455916 4.02420985598039 2.20609231135299 3.81831493692205 4.93121855977383 0.303974911381051 0.296680590652597 0.313197177531363 0.309145710469447 0.301021611818942 0.319292376036035 0.299890830112786 0.301331168661121 0.311732909386179 0.293851130529266 0.304785410310638 0.293748314118784 0.307121649181575 0.300410938489139 0.299161881512112 0.290387858965007 0.297946615263323 0.307045412329776 0.299243724857555 1 1 + 8335516 8336195 8335733.545 8333009 8336374 + gene protein_coding_gene FALSE TRUE AT1G23480.1|AT1G23480.2|AT1G23480.3 ATCSLA03 (Cellulose synthase-like A3); transferase, transferring glycosyl groups encodes a gene similar to cellulose synthase similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA14 (Cellulose synthase-like A14), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G56000.1); similar to ATCSLA10 (Cellulose synthase-like A10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G24070.1); similar to cellulose synthase-like A2 [Physcomitrella patens] (GB:ABD79100.1); similar to cellulose synthase-like A1 [Physcomitrella patens] (GB:ABD79099.1); similar to cellulose synthase-like protein OsCslA9 [Oryza sativa] (GB:AAL25128.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173)|similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G03760.1); similar to ATCSLA10 (Cellulose synthase-like A10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G24070.1); similar to cellulose synthase-like A1 [Physcomitrella patens] (GB:ABD79099.1); similar to Glycosyl transferase, family 2 [Medicago truncatula] (GB:ABE81491.1); similar to cellulose synthase-like protein OsCslA9 [Oryza sativa] (GB:AAL25128.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) -1.31950014877011 -10.5465270524576 4.76035112134088e-07 0.00730428276058545 10.4617339303255 7.08087182698386 -1.31950014877011 0.157223323278535 AT1G28330_at 8.10715493341352 8.23848529826632 6.20833017765741 6.02413037390769 9.1114382261942 8.83183795836928 2.344744896051 3.27275699704752 3.85987607639605 2.80984229668488 3.89000397769129 4.15270071091085 4.6868941664126 3.7120024930834 4.02660257556269 3.64763658865958 4.44043721770861 3.44912825539083 3.13194498839418 0.28153456109348 0.276207893115814 0.281272120203246 0.272367552890394 0.284783143440124 0.287059479868639 0.26813554559598 0.281071604358688 0.281893136990699 0.276442068442048 0.267806573755883 0.267140171246255 0.269366534113989 0.277718853063904 0.267640277625938 0.267140171246255 0.268897853866607 0.279339363014946 0.269008955576047 1 1|0 -|/ 9934239 9935155 9934840.889 9933871 9935256 - gene protein_coding_gene FALSE TRUE AT1G28330.1|AT1G28330.2|AT1G28330.3 DRM1 (DORMANCY-ASSOCIATED PROTEIN 1) dormancy-associated protein (DRM1) similar to dormancy/auxin associated family protein [Arabidopsis thaliana] (TAIR:AT2G33830.2); similar to auxin-repressed protein-like protein ARP1 [Manihot esculenta] (GB:AAX84677.1); contains InterPro domain Dormancyauxin associated; (InterPro:IPR008406) 1.39330164026167 10.5410200238093 4.78524325838936e-07 0.00734199873134679 10.4587208195338 10.1513082919480 1.39330164026167 0.172235909110632 AT4G12730_at 4.875026591873 5.32109030450211 0.897252623889382 1.18136032685966 1.42508202168467 2.03649159803192 6.04413975932896 6.57204627106111 7.36928782006195 6.212023636696 9.88330609185022 9.43360167514755 8.16313510493195 9.12485665397508 9.50771467469081 8.36784599485412 5.1786058447885 7.91290458817193 7.00639473402733 0.300467477620355 0.304099481429571 0.314267564716817 0.322392363056388 0.307249986210107 0.306853538558008 0.300467477620355 0.304039277542952 0.300467477620355 0.305375582275760 0.305755535606301 0.305812834148413 0.300608661865731 0.304350267742379 0.303864878798863 0.300467477620355 0.30333408682927 0.304939249901964 0.303375032840629 4 4 - 7491620 7492163 7491881.909 7491380 7492873 - gene protein_coding_gene FALSE TRUE AT4G12730.1 FLA2 (FLA2) AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds Identical to Fasciclin-like arabinogalactan protein 2 precursor (FLA2) [Arabidopsis Thaliana] (GB:Q9SU13;GB:Q8L9T2;GB:Q9C5Q6); similar to FLA1 (FLA1) [Arabidopsis thaliana] (TAIR:AT5G55730.1); similar to putative fasciclin-like arabinogalactan protein FLA2 [Trifolium pratense] (GB:BAE71278.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -1.36705074539269 -10.5380073582771 4.79892037267864e-07 0.00736250363576357 10.4570713583163 11.1985937165604 -1.36705074539269 0.167084880847338 AT1G11850_at 6.0939598858348 6.0881483183674 2.72496300491953 2.46471285212095 4.27934450957093 3.93648622246642 5.78213490949124 5.1779793425563 6.59427781260442 6.05710402901464 7.06564041080585 8.62203980957138 5.78418897592833 5.87976828221866 8.11649574740478 6.45318206019011 3.86000048806522 5.61857378136913 6.42287713283184 0.293385884791802 0.296807557465119 0.328191349628781 0.320218254732673 0.285547024827108 0.294916581824315 0.285608358855153 0.288856842181575 0.288143531695421 0.280990441916041 0.285268935765715 0.306623760114455 0.280170919563584 0.280170919563584 0.312134549218966 0.283514932331254 0.300840792152814 0.287542103054389 0.281939826765005 1 1 + 3999240 3999518 3999333.273 3999198 3999875 + gene protein_coding_gene FALSE TRUE AT1G11850.1|AT1G11850.2|AT1G11850.3|AT1G11850.4 |unknown protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] (GB:XP_001190956.1); similar to PREDICTED: similar to CG5812-PA [Tribolium castaneum] (GB:XP_969409.1); similar to Os03g0309300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049911.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49350.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to Os07g0688700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060703.1); similar to Os03g0309300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049911.1); similar to putative glycine-rich cell wall protein precursor [Oryza sativa (japonica cultivar-group)] (GB:BAC21356.1)||similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to PREDICTED: similar to keratin 7, partial [Gallus gallus] (GB:XP_001236709.1); similar to Os03g0309300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049911.1) -1.18363954858288 -10.5344072657149 4.8153199178979e-07 0.00738718228604717 10.4550992415097 10.9600023902965 -1.18363954858288 0.128378065223189 AT2G02100_at 8.50593142577417 8.56852889423147 5.45309107766480 5.92935606982789 6.55344689251875 6.6802583335671 3.76024525857561 3.72983031105386 3.60366912430236 3.48819804061426 4.45445315568871 7.21679853487611 4.70987306881375 5.33969974324509 7.53499351612165 4.72079757036625 4.47196886418946 4.65590517358441 3.02567937341503 0.248549718155059 0.252472728415297 0.244359599181227 0.248265296681036 0.254849455799733 0.246079429870089 0.241887354285733 0.24553836638855 0.250880479462805 0.243744543273777 0.246562687045073 0.241887354285733 0.241946885972866 0.2422194128047 0.246948387022945 0.241887354285733 0.241887354285733 0.244661905246885 0.248586228279258 2 2|0 +|/ 528413 528826 528664 528349 529107 + gene protein_coding_gene FALSE TRUE AT2G02100.1 LCR69/PDF2.2 (Low-molecular-weight cysteine-rich 69); protease inhibitor Identical to Low-molecular-weight cysteine-rich protein LCR69 precursor (LCR69) [Arabidopsis Thaliana] (GB:Q39182;GB:Q42011); similar to LCR68/PDF2.3 (Low-molecular-weight cysteine-rich 68), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02130.1); similar to protease inhibitor II (GB:AAA91049.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Knottin; (InterPro:IPR003614) 1.01422490578466 10.5206213287728 4.87868304250917e-07 0.00748389978720907 10.4475369349380 10.5278743909707 1.01422490578466 0.0861375997519623 AT4G11600_at 10.4306602826689 10.6521265619071 11.0713518809800 10.9802593019414 11.1938271169391 10.9030857074943 10.0797932879202 9.94181744693817 8.84524656235989 9.19594901211897 10.2065818510168 9.84787417831988 10.2320405920618 10.2512933707874 9.54950546737917 9.76547170780132 10.4185793493042 10.0388073775423 8.59500551144977 0.137892526033323 0.131702176778328 0.138516839484440 0.132227533131882 0.140447626552590 0.133622593096554 0.138217150490399 0.127026342399177 0.153230181619719 0.141863115464698 0.129612027732635 0.130030914155992 0.130877013029884 0.143317500934043 0.13742828769868 0.130084452235944 0.142357650468465 0.133110565724049 0.143579620704685 4 4|0 -|/ 7010172 7011100 7010562.125 7009763 7011369 - gene protein_coding_gene FALSE TRUE AT4G11600.1 ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase Encodes glutathione peroxidase. Identical to Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial precursor (EC 1.11.1.12) (PHGPx) (AtGPX1) (GPX6) [Arabidopsis Thaliana] (GB:O48646;GB:Q94BV3); similar to ATGPX7 (GLUTATHIONE PEROXIDASE 7), glutathione peroxidase [Arabidopsis thaliana] (TAIR:AT4G31870.1); similar to glutathione peroxidase [Malus x domestica] (GB:AAQ03092.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Src homology-3; (InterPro:IPR001452); contains InterPro domain Glutathione peroxidase; (InterPro:IPR000889) 0.960533574223593 10.519421181855 4.88424177887653e-07 0.0074919384646187 10.4468778086191 20.1153666643917 0.960533574223593 0.0694190984570295 AT3G19550_at 6.74507342501055 7.46224596218971 8.24163731437485 8.28352114589108 8.61476172632106 7.93979644053567 4.04157583230452 4.45134496554992 3.04433636283690 6.6807612587859 5.16576937725225 2.62280910151353 4.82978159542308 5.12405245014755 3.12782073780098 4.22089049528176 5.9900511310751 5.94548285403786 3.22108220857863 0.287589233959612 0.296409632996927 0.300162507395421 0.297128319223027 0.289975018686407 0.298050903889219 0.283967002296603 0.283967002296603 0.290555648346580 0.286991760541535 0.285600364495307 0.300964494882663 0.291698358058120 0.288784030627285 0.294900769239486 0.292941110903384 0.289657099069752 0.290257168575384 0.289572307995003 3 3 - 6787477 6788140 6787631.091 6787247 6788298 - gene protein_coding_gene FALSE TRUE AT3G19550.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA98694.1); similar to Os12g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066848.1) 1.45390402579985 10.5168137801884 4.89634218530828e-07 0.00751000964382584 10.4454453787034 11.4443573487973 1.45390402579985 0.184737744889327 AT1G73680_at 6.97706549492541 7.13498406935225 7.56379458781134 7.77734349175525 8.12365181661238 8.05977861667907 6.12668307526704 6.04774995648723 5.20210795573039 5.5611970059452 5.6006906597385 5.20850552941372 5.89782944836078 6.08982065380636 5.139414123513 5.81522404195114 6.98372097120695 5.67978512918936 5.12310124946097 0.209257287591043 0.202904299649116 0.205706795501219 0.208657649101606 0.228808347289465 0.213189969861005 0.207466674282908 0.207909480286547 0.216402142130482 0.207445705942113 0.203772915893403 0.206696272494549 0.203850465433987 0.204140234354183 0.21151136080392 0.204123199847974 0.208151814163903 0.206965971107979 0.206360728304493 1 1|0 -|/ 27707915 27708604 27708220.1 27707605 27711175 - gene protein_coding_gene FALSE TRUE AT1G73680.1 pathogen-responsive alpha-dioxygenase, putative similar to ALPHA-DOX1 (ALPHA-DIOXYGENASE 1) [Arabidopsis thaliana] (TAIR:AT3G01420.1); similar to TPA: TPA_exp: alpha-dioxygenase 3 [Lycopersicon esculentum] (GB:DAA01542.1); similar to alpha-dioxygenase 2 [Solanum lycopersicum] (GB:CAH64542.1); similar to alpha-DOX2 [Lycopersicon esculentum] (GB:AAR05647.1); contains InterPro domain Animal haem peroxidase; (InterPro:IPR002007); contains InterPro domain Haem peroxidase; (InterPro:IPR010255) 0.907963280904244 10.5150052318598 4.90475436086896e-07 0.00752242176326473 10.4444514671631 12.7750526669577 0.907963280904244 0.0492070927861584 AT4G01080_at 3.79504195514592 4.39136872749399 3.92759149954994 4.23809455578392 2.89532989224934 3.38642082079381 9.29815164417707 9.4158250827774 4.03496463614042 7.0554973006086 5.7204693063071 6.06489376683053 6.66431643275298 6.22674183461424 5.92819197727162 7.29536488940348 7.1522057374035 6.26229672625738 6.35817993319583 0.270160906401097 0.2629297110682 0.263351003375549 0.265558285891043 0.264595206546254 0.268188283583339 0.267708960839058 0.267656099642224 0.264821118227788 0.26484591234439 0.266593020640865 0.262405636980753 0.260797890692709 0.268762729293721 0.267891232853588 0.260797890692709 0.274757685123599 0.271989726551356 0.268830430009827 4 4 - 466762 467195 466986.182 466391 468294 - gene protein_coding_gene FALSE TRUE AT4G01080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01430.1); similar to unknown protein Cr17 [Brassica napus] (GB:AAX51387.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -1.25757076654876 -10.4980229950961 4.98451298195346e-07 0.00764424910912382 10.4351047250965 11.2837400424981 -1.25757076654876 0.145513670914210 AT4G04620_at 6.94541944148709 7.08944353606413 8.27644229789001 8.14325431421052 8.45516425832351 7.9997973988267 6.68203428453117 6.68102187276954 6.30260795886671 5.75766107205773 6.44781856282244 6.30749674883671 6.66608329048648 6.76778163645575 6.24668687230574 7.53114068059031 7.19335301674898 6.76870403604115 6.21384928879013 0.177008741492439 0.175172417056941 0.176755938449085 0.181905099242425 0.184545105192764 0.172575926537938 0.170144035121948 0.180266829385944 0.207956154523533 0.190756665176134 0.179972977553448 0.171047783209882 0.179948687804532 0.177007979292278 0.175191563290286 0.178738526862824 0.183052381284858 0.173350721024279 0.181081193054304 4 4|0 -|/ 2328669 2329898 2329044.5 2328447 2330198 - gene protein_coding_gene FALSE TRUE AT4G04620.1|AT4G04620.2 ATG8B (AUTOPHAGY 8B); microtubule binding similar to APG8A (autophagy 8A) [Arabidopsis thaliana] (TAIR:AT4G21980.2); similar to microtubule-associated protein 1 light chain 3 [Gossypium hirsutum] (GB:AAQ76706.1); similar to Os08g0191600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061171.1); contains InterPro domain Light chain 3 (LC3); (InterPro:IPR004241) 1.00947255794873 10.4831973820538 5.05529260485457e-07 0.00775229120954448 10.4269243257642 13.9503251148999 1.00947255794873 0.0858047501354577 AT4G15093_at 5.84007284263969 6.52174240044043 7.01661482013245 7.12729390592356 8.13274499271695 7.65351171926184 5.67157002321957 5.93501496724852 4.73436610006017 5.17595339479852 6.09321730165713 5.84676370557419 6.16100245597073 6.69886387383274 5.67836423397464 5.73066177682936 6.52743173327385 6.4787184583831 5.29954325720362 0.218671062046359 0.208184482896415 0.215873756923560 0.210699073935040 0.217584588769010 0.215949124382071 0.211678364379614 0.218615276075593 0.214332299133233 0.207879056876207 0.215489844169846 0.210630357367865 0.216402807718552 0.226358529607504 0.212453668980809 0.213928335455427 0.211938358703880 0.214503016832906 0.2085883183672 4 0|4 /|+ 8618932 8619417 8619134.7 8618340 8619643 + gene protein_coding_gene FALSE TRUE AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family Identical to 4,5-DOPA dioxygenase extradiol-like protein [Arabidopsis Thaliana] (GB:Q949R4;GB:O23363); similar to Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B [Medicago truncatula] (GB:ABE80304.1); contains InterPro domain Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; (InterPro:IPR004183) 1.28618249643559 10.4636606995846 5.15023174481997e-07 0.00789736535750695 10.4161150219467 12.3482368055101 1.28618249643559 0.15244446284088 AT2G04450_at 8.39665646314771 8.55984344444145 9.92978047174662 10.1000291354855 6.98208355320598 6.9613775113349 2.52933209386819 3.15496081604651 4.14729010637136 3.56766981479848 3.51065998522731 3.27082450033326 2.7892412371384 2.89302299318606 2.7840431755548 3.37191469225234 3.8748654213635 2.83622373241211 3.56799129294202 0.360583547140481 0.358291095220466 0.359591415016283 0.357967374177681 0.369954944022032 0.358624299678583 0.339101615517703 0.342115847969718 0.340854497426567 0.340992425286823 0.340005002917079 0.339101615517703 0.340198188101747 0.339101615517703 0.345941477237626 0.339101615517703 0.348832377220004 0.339101615517703 0.339101615517703 2 2|0 +|/ 1544143 1545243 1544698.8 1543317 1545459 + gene protein_coding_gene FALSE TRUE AT2G04450.1 ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6); ADP-ribose diphosphatase/ NAD binding / hydrolase Identical to Nudix hydrolase 6 (EC 3.6.1.-) (AtNUDT6) (ADP-ribose pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase) (EC 3.6.1.22) (NUDT6) [Arabidopsis Thaliana] (GB:Q9SJC4); similar to AtNUDT7 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 7), hydrolase [Arabidopsis thaliana] (TAIR:AT4G12720.3); similar to Nudix hydrolase 5 (AtNUDT5) (GB:Q9SJC6); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG; (InterPro:IPR003293) 1.11924259635673 10.4405422491297 5.26507976958338e-07 0.0080729468107022 10.4032805724336 10.5404245387700 1.11924259635673 0.115759812403119 AT1G61500_at 3.74430547885671 3.85214628785569 2.21236562681887 2.18742577722081 2.36099453968388 2.45377063172032 3.82156927669277 3.13848934635756 3.54699356099505 4.09144893185213 3.05844734147246 3.82383037431183 2.8727014501881 2.93681201989346 3.41265172267311 3.19182009219663 2.57507117240351 2.89667406784130 4.47019923932789 0.20447884149058 0.205847573558568 0.219523750078105 0.208959960659179 0.205441884188967 0.211779864064554 0.201653637126180 0.20213618788104 0.201801713205203 0.201823366277467 0.200716026316695 0.205033092763263 0.204221949431663 0.199965458936374 0.195788137853869 0.200585814492600 0.200134450150906 0.195788137853869 0.216945749536419 1 1 - 22693403 22693657 22693497.091 22693394 22696546 - gene protein_coding_gene FALSE TRUE AT1G61500.1 S-locus protein kinase, putative similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61480.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61440.1); similar to S-locus protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G61490.1); similar to Protein kinase; EGF-like, subtype 2; S-locus glycoprotein; Curculin-like (mannose-binding) lectin; Apple-like [Medicago truncatula] (GB:ABE85536.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Apple-like; (InterPro:IPR003609); contains InterPro domain S-locus glycoprotein; (InterPro:IPR000858); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain PAN-like, type 2; (InterPro:IPR013227); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.13785066709109 -10.4164142553026 5.38790925996918e-07 0.00826074247738475 10.3898352739674 6.53749084107461 -1.13785066709109 0.120823542914800 AT3G12920_at 8.84092388735854 9.0701403229609 7.93257564402433 7.65267907881297 7.7299141763047 7.6634861105766 9.24423960338918 9.43136736666355 9.46950805454818 9.50274336501077 9.52114728797843 9.61245508011501 9.00086752355171 9.13097485771755 9.37767183901262 9.41083876548648 8.18429734408868 8.3933512179649 9.79256889871006 0.155020379290731 0.148773678162742 0.156899431186491 0.156400874280993 0.158628517052625 0.150289991640081 0.142942154550869 0.145792039121570 0.14774923093768 0.14663655180356 0.142942154550869 0.142942154550869 0.143719767786999 0.144328287150227 0.143312560464757 0.142942154550869 0.161095395997907 0.153214315689513 0.146244385091021 3 3 - 4122135 4122491 4122322.182 4121890 4123515 - gene protein_coding_gene FALSE TRUE AT3G12920.1 protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G79110.2); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABE88778.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.955663496298485 -10.4017410977966 5.46412245164873e-07 0.00837704613062267 10.3816334128090 17.7792777382176 -0.955663496298485 0.0714176594026055 AT4G21120_at 6.32980035382409 6.25252715477137 6.39889758634651 6.77734479520324 5.19532807260673 5.07067063119603 1.56058503979082 1.62356361513001 1.84519361931777 1.98696797716007 1.68240263189451 1.88380218737402 1.83600030419223 1.72613757355342 1.91850520274078 1.55653672358987 2.22819800206901 2.13870292943470 1.81118818966677 0.332831716139463 0.333455300330782 0.32977127556672 0.342508273963340 0.329288111415896 0.326142327743928 0.319616340412951 0.329098181101186 0.319716688988534 0.319616340412951 0.323041655134675 0.319616340412951 0.325005406269617 0.320825230920646 0.323447470572472 0.319616340412951 0.32552822899386 0.319685775120869 0.319616340412951 4 4 + 11273195 11273664 11273384.273 11270056 11273984 + gene protein_coding_gene FALSE TRUE AT4G21120.1 AAT1 (CATIONIC AMINO ACID TRANSPORTER 1); cationic amino acid transporter cationic amino acid transporter similar to CAT5 (CATIONIC AMINO ACID TRANSPORTER 5), cationic amino acid transporter [Arabidopsis thaliana] (TAIR:AT2G34960.1); similar to Os01g0209800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042365.1); similar to Amino acid permease family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99390.1); similar to Os03g0641200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050746.1); contains InterPro domain Cationic amino acid transport permease; (InterPro:IPR004755); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) 0.954555164716793 10.4006202890851 5.46999182944571e-07 0.00838549747454028 10.3810061266107 6.7772908009774 0.954555164716793 0.0710787595384999 AT1G62800_at 6.18479342789903 5.93438404221359 6.53279915909946 6.42510789099197 6.96968764463887 6.57316845516337 7.03183278309233 6.80911924544101 3.68975138789782 6.20434124610569 7.07787283273017 6.65677993379388 7.2728026054114 7.93223498892545 6.43284877836658 7.24138137362497 7.69732036267139 7.83079994825474 6.1852231895471 0.190322107877092 0.18815841548438 0.192140475717292 0.185364900163844 0.185745786641161 0.190572820955174 0.194896849361123 0.189459709784713 0.223610946302529 0.193152923521915 0.185199721795773 0.188210405268591 0.183765560685076 0.195390738445176 0.190463220475814 0.185213373788214 0.195798624703694 0.184656867153432 0.197662902141299 1 1 - 23257602 23259429 23258697.909 23257368 23261128 - gene protein_coding_gene FALSE TRUE AT1G62800.1|AT1G62800.2 ASP4 (ASPARTATE AMINOTRANSFERASE 4); catalytic/ transaminase/ transferase, transferring nitrogenous groups Encodes aspartate aminotransferase (Asp4). Identical to Aspartate aminotransferase, cytoplasmic isozyme 2 (EC 2.6.1.1) (Transaminase A) (ASP4) [Arabidopsis Thaliana] (GB:P46646;GB:Q9SI69); similar to ASP2 (ASPARTATE AMINOTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT5G19550.1); similar to aspartate aminotransferase (GB:AAA79372.1); similar to aspartate aminotransferase (GB:AAA79370.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 1.02157078730036 10.3933402390414 5.50828221004478e-07 0.00844364579977764 10.3769289566085 12.8713751031454 1.02157078730036 0.0917566862505576 AT1G08650_at 5.3746108705204 5.77413501788131 5.09951445208532 5.72288087174102 6.45327530368612 6.18305489735423 5.49904815174675 5.49124889710456 4.69156063897689 3.60134940468224 6.73114558837236 5.63859974319712 5.80726651864055 6.38847045565279 6.38322728624819 4.95108161323824 6.64170916271325 4.23926982366287 3.03011634578658 0.242650059902936 0.240410985827027 0.244311485397114 0.240812350912059 0.239246686913257 0.239165264032999 0.238345041653281 0.250213788894414 0.257355250293376 0.24776066450842 0.236681406423957 0.239267510841069 0.241557243462718 0.236681406423957 0.243716229554278 0.236681406423957 0.253760757589117 0.247148453347851 0.251583994317737 1 1 + 2752467 2752923 2752679.909 2752159 2753706 + gene protein_coding_gene FALSE TRUE AT1G08650.1 PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE); kinase Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. similar to PPCK2 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT3G04530.1); similar to phosphoenolpyruvate carboxylase kinase [Lotus japonicus] (GB:BAC20362.1); similar to phosphoenolpyruvate carboxylase kinase [Glycine max] (GB:AAN12515.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.20158739552693 10.3778498909155 5.59072569189333e-07 0.0085694643405341 10.3682379031358 10.5106902596554 1.20158739552693 0.136404528571372 AT2G36380_at 6.80078840928205 7.14077775499266 6.68079285514797 7.08906282608762 8.41744600543401 7.77618189905528 6.26394370035056 6.09242876925048 6.06662156198355 5.62540778805928 7.91963291035776 6.64691327281185 6.96135028093 8.23482747982813 6.62604970464143 7.05807940148835 6.73823690146527 7.91073659923925 5.34909562792273 0.260518970258306 0.245974037575737 0.249116329919455 0.241406884214949 0.249053006647494 0.255861819713208 0.250833713210933 0.244132410540136 0.254913334707022 0.255448891831004 0.251548542671395 0.249671782182132 0.241380552838676 0.254434012970973 0.242764346910105 0.24333826599654 0.269503987078895 0.241380552838676 0.244361059190117 2 2|0 +|/ 15269989 15270628 15270323.7 15264662 15270843 + gene protein_coding_gene FALSE TRUE AT2G36380.1 ATPDR6/PDR6 (PLEIOTROPIC DRUG RESISTANCE 6); ATPase, coupled to transmembrane movement of substances Identical to Pleiotropic drug resistance protein 6 (PDR6) [Arabidopsis Thaliana] (GB:Q7PC87;GB:Q56YS3;GB:Q9SJR6); similar to ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G15520.1); similar to ATPDR11/PDR11 (PLEIOTROPIC DRUG RESISTANCE 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G66950.1); similar to ATPDR1/PDR1 (PLEIOTROPIC DRUG RESISTANCE 1), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G16340.1); similar to Pleiotropic drug resistance protein 2 (NpPDR2) (GB:Q2PCF1); similar to PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:CAD59574.1); similar to Pleiotropic drug resistance protein 1 (NtPDR1) (GB:Q76CU2); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain Plant PDR ABC transporter associated; (InterPro:IPR013581); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.24899478207617 10.3634976549528 5.66830609193181e-07 0.00868781274710389 10.3601662573706 13.5038544332003 1.24899478207617 0.14713861737825 AT4G14365_at 9.7702532749054 9.65968980625696 10.7846412724266 10.6164090507512 9.56920299698933 8.93477285881248 5.38077158492345 5.01120212293697 8.79641075133292 6.81535104639735 7.30770870424613 8.39925883581225 6.08579852897747 7.84665543689107 7.46107844577187 6.49887002858699 6.61526230987892 7.21285409752396 6.41311693160386 0.21354897688253 0.207408291086231 0.217103661141472 0.213301767295007 0.211154622213687 0.207408291086231 0.217297642292254 0.222503287916529 0.212527554001430 0.212708044798968 0.210491325672369 0.207408291086231 0.219198923896415 0.214752808671970 0.209433443423762 0.210924950949567 0.215049587673189 0.210671879356239 0.214642733981455 4 0|4 /|- 8271675 8272248 8271848.143 8271460 8273733 - gene protein_coding_gene FALSE TRUE AT4G14365.1 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein similar to zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G23280.1); similar to auxin-regulated protein-like protein [Populus trichocarpa] (GB:ABG37641.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.17879345141945 10.3598070615207 5.68844343826405e-07 0.00871810841348348 10.3580876985993 15.9758988917865 1.17879345141945 0.131750136458255 AT4G31120_at 5.65383096087467 5.87338938686315 5.28743979461332 5.41618019708002 5.15312890825125 5.10427867354194 6.04513693625298 6.3735569047679 5.34557090776217 5.10451481669091 3.80327675461721 4.06504368307628 4.14974822552291 3.91908759048735 4.08002928560111 4.81659983321788 4.43153800391686 4.04522280502431 5.52807866421147 0.222098680654608 0.209243338624001 0.220402840724255 0.217830878370609 0.208103140804031 0.208271536026525 0.219246084914844 0.209599047739893 0.235307904580305 0.209985926691882 0.225595217019267 0.213356494599743 0.219659231610629 0.208526401864609 0.209497715758438 0.207449566513594 0.217316688964319 0.219893103698347 0.208655688912463 4 0|4 /|- 15132204 15132802 15132494.125 15132017 15136643 - gene protein_coding_gene FALSE TRUE AT4G31120.1|AT4G31120.2 Skb1 methyltransferase family protein similar to Os02g0139200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045843.1); similar to SAM (and some other nucleotide) binding motif; Skb1 methyltransferase [Medicago truncatula] (GB:ABE80388.1); contains InterPro domain Skb1 methyltransferase; (InterPro:IPR007857) -0.954229088678284 -10.3543455126270 5.71838618756644e-07 0.00876342683244557 10.3550094879366 10.3583042547329 -0.954229088678284 0.0723993405062421 AT1G12750_at 7.02629702541779 6.55447892718576 5.15739576775828 4.86452707299076 5.96709256406677 5.96051275128044 7.34184771427576 7.22767037675014 7.4261951773634 7.7897354968579 7.38724160080078 8.01616982747039 7.13441454124112 7.17021638177732 7.24803691202426 7.10093084637415 6.61451828334446 7.07905746839969 8.03481395645153 0.170678855855273 0.165863040079769 0.174123069120672 0.177592585428234 0.164819703660988 0.174580925773943 0.169912053226892 0.167538554421883 0.166702227198113 0.174507908937728 0.161357933176704 0.177461310023658 0.163551280418760 0.166990433380977 0.175298202076861 0.168703810029146 0.176022210404220 0.161591514187850 0.16784260798787 1 1 - 4345117 4345829 4345436.545 4344983 4348326 - gene protein_coding_gene FALSE TRUE AT1G12750.1|AT1G12750.2 rhomboid family protein similar to ATRBL2 (ARABIDOPSIS THALIANA RHOMBOID-LIKE 2), serine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G63120.1); similar to membrane protein [Saccharum hybrid cultivar H65-7052] (GB:AAA02747.1); similar to Os09g0525900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063723.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) -1.04080822471427 -10.3537980582945 5.72139699012083e-07 0.00876746874766117 10.3547007868574 13.7470134964174 -1.04080822471427 0.0981182018365755 AT2G32140_at 2.52531400207199 2.32069325356343 6.19206657054624 5.72792680739454 3.49555951991706 3.12747365481920 2.13836393383222 2.06153202862640 2.37653879199317 2.01433384529321 1.65916222308526 1.67973568603845 2.01481059070542 1.30053974388011 1.77024007772755 2.06018554278264 1.86518572192496 1.78843929609544 1.53390923449320 0.254821529094084 0.250337078106111 0.27127825809682 0.275311150637143 0.261510182798306 0.245305596453861 0.241212159197811 0.241212159197811 0.250666259116706 0.243185675740311 0.242576652188791 0.252468057634864 0.247148149446768 0.249135905134003 0.241398934266611 0.249290007123001 0.245358860544006 0.248983830410049 0.242830227273755 2 2 - 13663349 13663909 13663657.2 13662704 13664242 - gene protein_coding_gene FALSE TRUE AT2G32140.1 transmembrane receptor similar to ATPP2-A5, transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G65390.2); similar to TIR; Disease resistance protein [Medicago truncatula] (GB:ABD28631.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Protein of unknown function DUF641, plant; (InterPro:IPR006943) 1.08332045166627 10.3501179219041 5.74168105489766e-07 0.00879797788041969 10.3526249159473 5.31972354678297 1.08332045166627 0.109269422095027 AT3G09600_at 3.31491399889448 3.25354665614740 3.35824447628779 2.91740818975169 2.82989952466872 2.83442049968023 5.4107121090555 5.10596871176773 3.67252114554407 4.09627162289587 2.99664841949102 3.01726072057296 3.21535786660841 3.47970976965816 2.52829360562740 4.26946212402978 3.51570162132218 3.15113487738017 4.31084428495213 0.157055873335954 0.154637748049712 0.158417090647469 0.158506661037356 0.157093409181204 0.160214883732382 0.165447314233959 0.162581821696287 0.156817694377368 0.156574558211231 0.155951813049188 0.155865567816593 0.154693443487853 0.157176773905662 0.157530547965135 0.160805244384692 0.158735037895608 0.159924775813003 0.159181971700117 3 3|0 +|/ 2946483 2948181 2947212.933 2946411 2949000 + gene protein_coding_gene FALSE TRUE AT3G09600.1|AT3G09600.2 myb family transcription factor|DNA binding / transcription factor similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G02840.3); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G02840.2); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.02057087762347 -10.3253198837777 5.88041027926275e-07 0.00900996462988639 10.3386052110934 7.27726017580683 -1.02057087762347 0.0933519736280339 AT4G03500_at 1.42560693446133 1.61299563579650 2.11561324608456 1.8379748401262 1.36694455767477 1.03780774446999 4.8521031697539 4.46251341720758 1.46433401174989 3.34137097466217 1.43550806161684 0.301252568857578 1.75113159454952 2.40600372803413 0.987795892115402 2.54745465133094 2.33236805620195 2.27075768755217 2.34339701690180 0.214102592771727 0.218121981810296 0.222279979560351 0.22084414316145 0.215063986140566 0.226911815773168 0.223900198925939 0.235888242312842 0.216414843133586 0.229814976299826 0.214102592771727 0.21996039815139 0.214525423065136 0.214102592771727 0.217854780095269 0.218402488847537 0.216563439396232 0.214102592771727 0.224246889001946 4 4 + 1556056 1556489 1556294 1553090 1556569 + gene protein_coding_gene FALSE TRUE AT4G03500.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G03460.1); similar to Ankyrin [Medicago truncatula] (GB:ABE77954.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) -1.06385983164413 -10.3016371214525 6.01629590900662e-07 0.00921756696218905 10.3251642278001 4.40747895876532 -1.06385983164413 0.105592962472267 AT2G25850_at 7.05351606875305 7.09787956373728 6.94857515963267 6.98081462719322 7.06193676636305 7.22166717149551 4.50453757652986 4.84304347067069 6.12195558165703 6.48469090892641 7.27849653073331 7.83010423469698 6.64118840643562 7.2953716436456 7.05757683889096 7.61770782110591 6.96856689078488 6.99822285212277 6.9893508492592 0.186415176307612 0.187497037247348 0.194596086700895 0.186451179226278 0.186206432320013 0.191099765101110 0.196542835829926 0.196471890134989 0.196923667567659 0.199732704728562 0.186818764895444 0.182414591503703 0.197257498491935 0.190305320065844 0.189069779939028 0.182414591503703 0.196385987861302 0.186319955815717 0.198906918042872 2 2|0 -|/ 11033222 11034180 11033897.6 11032588 11037705 - gene protein_coding_gene FALSE TRUE AT2G25850.1|AT2G25850.2|AT2G25850.3 nucleotidyltransferase family protein|nucleotidyltransferase similar to nPAP (NUCLEAR POLY(A) POLYMERASE), nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT4G32850.6); similar to putative poly(A) polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD54151.1); similar to Poly(A) polymerase central domain, putative [Medicago truncatula] (GB:ABE90424.1); similar to PAP/25A core; Poly(A) polymerase, RNA-binding re (GB:ABE80786.1); contains InterPro domain PAP/25A core; (InterPro:IPR001201); contains InterPro domain DNA polymerase, beta-like region; (InterPro:IPR002934); contains InterPro domain Poly(A) polymerase, C-terminal-like; (InterPro:IPR011068); contains InterPro domain Poly(A) polymerase, central region; (InterPro:IPR007012); contains InterPro domain Poly(A) polymerase, RNA-binding region; (InterPro:IPR007010)|similar to nPAP (NUCLEAR POLY(A) POLYMERASE), nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT4G32850.8); similar to putative poly(A) polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD54151.1); similar to Poly(A) polymerase central domain, putative [Medicago truncatula] (GB:ABE90424.1); similar to PAP/25A core; Poly(A) polymerase, RNA-binding re (GB:ABE80786.1); contains InterPro domain PAP/25A core; (InterPro:IPR001201); contains InterPro domain DNA polymerase, beta-like region; (InterPro:IPR002934); contains InterPro domain Poly(A) polymerase, C-terminal-like; (InterPro:IPR011068); contains InterPro domain Poly(A) polymerase, central region; (InterPro:IPR007012); contains InterPro domain Poly(A) polymerase, RNA-binding region; (InterPro:IPR007010) 0.928704775134759 10.2925559122721 6.06930067325075e-07 0.00929816863142016 10.3199967808791 13.3354480583384 0.928704775134759 0.0654658143722928 AT2G10940_at 10.0854959246034 10.6580344049879 4.79146156012965 5.08436604727703 8.76948839776468 9.2897064662949 9.40789093328723 10.1982102162877 11.7253105350352 10.9778902910781 12.5414479426199 12.2315481459402 11.7081475817329 11.4920791765833 12.4386915800447 11.0166818301053 9.03321781269686 11.8383151426245 11.5387315355427 0.129699677988252 0.129699677988252 0.188761674259175 0.171848111713330 0.136826029073777 0.143835161785132 0.135205460212432 0.135157934931937 0.141347145763889 0.131297742603656 0.133538251208884 0.132406064141827 0.133900956771097 0.13515068724036 0.133030942995607 0.129699677988252 0.14675007442438 0.129699677988252 0.132728297710700 2 2 - 4318260 4318598 4318432.182 4317494 4319185 - gene protein_coding_gene FALSE TRUE AT2G10940.1|AT2G10940.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22142.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71274.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -1.49005677713341 -10.2884681335668 6.09332495444789e-07 0.00933436449771871 10.3176682846004 20.0113285465434 -1.49005677713341 0.197981248567749 AT1G75540_at 5.18719826577284 5.45823510691888 5.02670604999617 5.09019211998392 6.49881273817021 6.27047591961838 4.74531984647694 4.62158969726964 5.5142131880136 4.84072715243418 6.34505905496846 6.62583331763291 6.52237878178113 6.21645186110871 6.48179812385011 6.01945819886141 6.0679574525748 5.74209919327644 4.99637004256702 0.219173538719073 0.210420574093579 0.222227908599622 0.220240676440756 0.210860086800395 0.220550556527308 0.213484937358342 0.22130375031892 0.218366828269617 0.206438109523592 0.213773872192903 0.213765859308793 0.206438109523592 0.206438109523592 0.209425499977533 0.209506393202867 0.213175545294667 0.206438109523592 0.206438109523592 1 1 + 28370212 28370912 28370498.182 28369720 28371313 + gene protein_coding_gene FALSE TRUE AT1G75540.1 zinc finger (B-box type) family protein Identical to Putative salt tolerance-like protein At1g75540 [Arabidopsis Thaliana] (GB:Q9LQZ7); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G39070.1); similar to H0115B09.3 [Oryza sativa (indica cultivar-group)] (GB:CAH67391.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.926993507417204 10.2608975302074 6.2580756504532e-07 0.0095861202813642 10.3019237089250 11.0471826975317 0.926993507417204 0.0658832316766815 AT3G10410_at 9.96175118675087 9.86455081203894 9.9772435496568 9.86425190209751 10.3909834173666 10.0554950376656 8.99819251365821 9.03329154519222 6.73739169552624 8.01380240480024 8.4207621471594 8.00341929828186 8.57510265105397 8.57477341509166 8.2092790252272 7.96765409485839 9.40971150801396 9.06196255668045 7.12831170366803 0.211766376265592 0.210345325987956 0.210399361795039 0.215513180454849 0.210345325987956 0.213505733090424 0.210345325987956 0.216048928718712 0.233143956321343 0.224099273891791 0.217382778137653 0.219164352012157 0.210345325987956 0.210360065733612 0.223298633397570 0.219506418229347 0.210929221683547 0.210345325987956 0.240921038706325 3 3|0 -|/ 3235553 3236460 3236030.1 3235296 3238118 - gene protein_coding_gene FALSE TRUE AT3G10410.1 SCPL49 (serine carboxypeptidase-like 49); serine carboxypeptidase Identical to Serine carboxypeptidase precursor (EC 3.4.16.-) [Arabidopsis Thaliana] (GB:P32826;GB:Q42107;GB:Q9CAE5); similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to SCPL47 (serine carboxypeptidase-like 47), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G22980.1); similar to carboxypeptidase type III [Theobroma cacao] (GB:CAC86383.1); similar to carboxypeptidase Y-like protein (GB:AAB04606.1); similar to putative serine carboxypeptidase precursor [Gossypium hirsutum] (GB:AAL67992.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.921105724000469 10.2577540229688 6.27716430335134e-07 0.00961473256344324 10.3001241646631 17.6787208397420 0.921105724000469 0.0638192706210553 AT3G50260_at 6.74208148932332 6.32093151437376 7.04841170145941 6.72403409645123 6.33263959624354 6.0903695859991 3.13104020373805 2.78738718263269 3.49882053866134 2.95903292706966 3.28127291037651 3.50845717387440 3.00256065063782 3.56626699217035 3.51030193157415 3.65667437175998 3.55304035111215 3.79097390642042 2.77760582839903 0.383311925448889 0.387093410340582 0.392157282909157 0.387183350870404 0.389949441485713 0.392201834119628 0.381072528704292 0.384265917318273 0.386006154475338 0.381072528704292 0.381072528704292 0.383547063958303 0.384361911351702 0.381072528704292 0.38584443029356 0.381072528704292 0.384394819878786 0.387655317216306 0.381072528704292 3 3 + 18645790 18646085 18645955.091 18645558 18646380 + gene protein_coding_gene FALSE TRUE AT3G50260.1 ATERF#011/CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1); DNA binding / transcription factor encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G67190.1); similar to dehydration responsive element binding protein [Gossypium hirsutum] (GB:AAQ08000.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.10435537606770 10.2433253326107 6.36559403437809e-07 0.00974954382305348 10.2918526731014 8.92820190496133 1.10435537606770 0.117292295601960 AT1G29720_at 7.32416797805874 6.88430334291679 6.30788784986224 5.73004477763242 6.25726844800618 5.77683783996642 8.41333596594363 7.9821339452981 9.40955208427263 9.12099156686665 8.41486271827485 9.08667325278738 7.64209679043459 8.49277409537456 8.09314477178189 8.02838308599995 7.25049773177886 8.12064263012032 8.99577444209278 0.183560792523286 0.181062980200451 0.18450423668287 0.187711964245305 0.182275602825900 0.185465648956700 0.181476029715696 0.185072608908892 0.183292680902002 0.182895314875503 0.175879396083644 0.175847601750906 0.179473789127764 0.180400488027679 0.174817620811632 0.175409214360808 0.204173259003176 0.182236377439661 0.18063222133157 1 1|0 -|/ 10393932 10394611 10394157.778 10393783 10395589 - gene protein_coding_gene FALSE TRUE AT1G29720.1 protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G29740.1); similar to putative receptor-like protein kinase 2 [Glycine max] (GB:AAU10526.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.33364027951456 -10.2405596046460 6.38269810313981e-07 0.00977510214495862 10.2902649965338 15.4927843929504 -1.33364027951456 0.168151105848903 AT4G34600_at 1.99866501167442 2.48086403967402 4.16806802672749 4.17613659061106 4.34376961622844 3.88395522911216 3.69812006225833 4.02943327542845 2.60381997633444 3.77420985315869 4.62737264319283 3.57673578751817 4.69655199812871 4.83169885789221 3.41982930555156 4.70429744605527 5.261725369042 4.94519355715233 3.51393498835829 0.226283722721202 0.213624986989951 0.205863514452942 0.209437120912953 0.21298027975756 0.217622311283662 0.211020471983933 0.205256304062297 0.213427202993305 0.208238315449446 0.208265728452512 0.207166060038533 0.209860824819863 0.222393419110951 0.207118444034158 0.216620307581308 0.237254032344521 0.207502399397009 0.211691691574755 4 4|0 +|/ 16529286 16529939 16529561.8 16529230 16530191 + gene protein_coding_gene FALSE TRUE AT4G34600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16385.1) 1.15090789151357 10.2276812548624 6.46299986934395e-07 0.00989743799991333 10.2828628956054 7.50000009472285 1.15090789151357 0.128780895177583 AT2G15960_at 11.3348177829688 11.5320699447031 11.1476243082807 11.2503147399813 12.0145485021595 11.9042039804039 10.0876368250616 10.1570815183671 10.5012797669997 10.2822571908970 11.8251010695022 11.4273118203107 11.5158691910586 11.6404908055953 11.1952610049554 11.1105586907231 11.1399176364554 11.1607555005333 10.5246606245527 0.110166320024899 0.110873029967129 0.112042686800858 0.115934514163728 0.112636366209677 0.114426225441656 0.115986642454586 0.119108396875824 0.128404059078773 0.116626906774528 0.11031401108583 0.109029646452598 0.112005859269732 0.121238378148825 0.11088455079576 0.109029646452598 0.116820582947981 0.112736233778470 0.112618559101671 2 2 + 6954443 6954644 6954561.636 6954391 6954770 + gene protein_coding_gene FALSE TRUE AT2G15960.1 unknown protein 0.871056859503258 10.1965728243484 6.66152444101592e-07 0.0102007923765277 10.2649197715792 22.0850242380949 0.871056859503258 0.0446105986999905 AT3G19450_at 8.5443390661404 8.8530338358097 8.0289422295743 8.16049339828148 7.74033187983999 7.60697685200685 9.729974679051 9.6958167544146 9.19244501061383 9.50994949707326 8.50267496033538 9.26538433289185 8.77174211413147 9.33303966725477 8.78540547088851 9.1143200343827 8.51220194125762 8.69842067765824 9.42729685358702 0.176975740758154 0.158815965573111 0.169720179548433 0.173972460196597 0.162781617062763 0.171232788071868 0.164992617101406 0.163919309842619 0.177925257082366 0.160012055806354 0.162497411979037 0.157317141183918 0.167256330366866 0.156449071998121 0.164831432273410 0.156655010507473 0.165775606499801 0.165813759212245 0.159274976875912 3 3|0 +|/ 6746327 6746981 6746593.6 6744604 6747220 + gene protein_coding_gene FALSE TRUE AT3G19450.1 CAD4 (CINNAMYL ALCOHOL DEHYDROGENASE 4); cinnamyl-alcohol dehydrogenase Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. Identical to Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) (CAD) (CAD) [Arabidopsis Thaliana] (GB:P48523); similar to CAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5), cinnamyl-alcohol dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G34230.1); similar to cinnamyl alcohol dehydrogenase [Ocimum basilicum] (GB:AAX83108.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) -0.912635065584791 -10.1944447800583 6.67534432713907e-07 0.0102212872337153 10.2636890702735 17.6697198053605 -0.912635065584791 0.0627662605061266 AT1G15670_at 8.96764227555465 9.39937042629954 8.54637098753747 9.3899029947224 10.01450774574 9.97908130954444 4.05092999057385 4.05512381230989 6.50941440208552 4.30354609440868 4.91984619047978 4.82249737713688 4.90469302585756 5.6241634052904 3.82613443158814 6.18477569494302 5.15457286871127 4.85383414379975 5.04118365206054 0.351528197630292 0.351617424576457 0.359545835715835 0.344296743562295 0.346932118369189 0.350001037456718 0.338012135722419 0.326781937661271 0.325623887042414 0.33168129767496 0.325623887042414 0.329985068708557 0.333397914384013 0.325623887042414 0.337579122610282 0.325623887042414 0.338661090508478 0.325623887042414 0.325623887042414 1 1 + 5390602 5391155 5390827.091 5389947 5391485 + gene protein_coding_gene FALSE TRUE AT1G15670.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G80440.1); similar to kelch repeat-containing F-box-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25000.1); similar to Os06g0594400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057979.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 1.30789952962127 10.1926185635831 6.68722885421187e-07 0.0102388160986838 10.2626325899797 13.2108808719907 1.30789952962127 0.164101822540386 AT2G43200_at 4.56162264984808 5.00427540403507 3.37681729993146 3.47602426854061 4.23033112223463 4.09076882752766 5.32704748832903 4.90033452557625 5.21545669698627 5.2013622017163 4.92952213602437 4.39668229273249 5.14413165999976 4.39758067317129 4.43216072011632 4.45468078083557 4.19836284831898 4.1190281409834 6.06572550589157 0.223138228542218 0.227322884454024 0.223661891240149 0.228364469047916 0.220038104886858 0.234759942006159 0.220741860082854 0.23052913826546 0.229698002009028 0.233933128149274 0.220038104886858 0.223616726453381 0.232378989312056 0.222393808348457 0.223161857196624 0.221653584085155 0.233912114178722 0.241362479927275 0.231377255024196 2 2 + 17966869 17967478 17967101.545 17965307 17967613 + gene protein_coding_gene FALSE TRUE AT2G43200.1 dehydration-responsive family protein similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G00750.1); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G45750.1); similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G33170.1); similar to Os10g0510400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065036.1); similar to dehydration-responsive protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67956.1); similar to Os06g0103900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056546.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) -1.06999872453190 -10.1786502715659 6.77889244337987e-07 0.0103784843308146 10.2545416234695 9.37250276061326 -1.06999872453190 0.110449699926187 AT1G56050_at 6.38651568760922 6.77414131476755 4.75325266689146 5.24036618281729 5.17619193633189 5.18622390055377 8.74011973659523 8.53137097986769 6.04576452660255 7.17383615915737 6.26301298027425 7.96711141419771 6.5861817360613 6.65669646122199 8.5881057275866 6.20192870128038 6.86541844718435 6.17296382626695 6.45668128585176 0.218352645209666 0.216730362946226 0.220012536557960 0.220372244821507 0.214690007644096 0.224576914604412 0.219418678578796 0.220198270162587 0.220451848157823 0.220473724412033 0.214227209267390 0.214086807829132 0.214759390604331 0.214086807829132 0.217234218231553 0.214086807829132 0.232715848279284 0.214480400077737 0.214086807829132 1 1|0 +|/ 20968749 20969813 20969091.9 20967384 20970006 + gene protein_coding_gene FALSE TRUE AT1G56050.1 GTP-binding protein-related similar to GTP binding [Arabidopsis thaliana] (TAIR:AT1G30580.1); similar to putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAK09228.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain Protein of unknown function DUF933; (InterPro:IPR013029); contains InterPro domain Conserved hypothetical protein 92; (InterPro:IPR004396); contains InterPro domain TGS-like; (InterPro:IPR012676) -1.08255575175301 -10.1778230454939 6.7843634395682e-07 0.0103861819896349 10.2540618961081 13.0842418351608 -1.08255575175301 0.113639068065243 AFFX-Athal-Actin_5_r_at 2.72578078958547 3.07811621291033 3.42079918047185 3.73366418062966 4.18125943862956 3.66000528710362 2.88806421328075 3.31980336708072 2.51386158553211 2.12105711102601 3.81301688504819 4.11450203494665 4.31995503388581 3.73741416843380 3.57813037617806 3.55485770375218 3.41945715485618 4.04913794497342 1.83921192348363 0.233626273286547 0.221966232725865 0.23389830026539 0.226194677899921 0.223201250182744 0.223512792691251 0.227410892256299 0.220604430094746 0.234869692113587 0.239879391640815 0.220194554819031 0.220785052715758 0.227128457291137 0.228860885294911 0.221879327366065 0.220066692231077 0.250751305451326 0.230200131797921 0.246276645738626 NA NA NA NA NA FALSE FALSE 1.20562812436986 10.1699233839066 6.83685073390771e-07 0.0104658511034659 10.2494775058935 6.3666128100981 1.20562812436986 0.142718103211733 AT1G12220_at 4.74397393622233 4.40912247087260 3.5486171385711 3.22516455193413 3.68986406154906 3.71239055435566 3.54636709791749 3.61282006313113 3.96654995146323 3.59745234244995 2.56980734642858 2.44418263690309 2.69584110256587 2.21227968587372 2.15136859971523 2.0664100546651 2.91991119924849 2.37110126178466 3.90587794162043 0.241733265867325 0.248403112143182 0.250181340411656 0.245258720948098 0.242950962751820 0.256355785990578 0.247702945357059 0.251782654015966 0.259023523759607 0.242354519601672 0.246573354896947 0.261435026733294 0.262267786743158 0.244053694616368 0.245292425735244 0.24048192460164 0.253525810228093 0.251134657360971 0.249269346852679 1 1 + 4147117 4147640 4147338.818 4144933 4147815 + gene protein_coding_gene FALSE TRUE AT1G12220.1 RPS5 (RESISTANT TO P. SYRINGAE 5) Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Identical to Disease resistance protein RPS5 (Resistance to Pseudomonas syringae protein 5) (pNd3/pNd10) (RPS5) [Arabidopsis Thaliana] (GB:O64973;GB:O81402;GB:O82098;GB:O82100); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12290.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RFL1 (RPS5-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G12210.1); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62353.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62352.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.964246245689922 -10.1603834294804 6.90082359549462e-07 0.0105630906776236 10.2439334888877 6.9371180581905 -0.964246245689922 0.0814774216200335 AT3G17609_at 4.63160425649162 4.49311922673868 4.68391950123489 4.39500267385476 2.43161542182577 2.25176481450262 6.06203101369242 5.21918300494292 3.92143349538303 3.98424565722924 2.71003314665624 3.50063088791633 3.26719209947413 3.03757289371299 2.92012499452154 4.45875640360301 3.77168157530796 2.84105782882652 4.72379526877736 0.221954354117078 0.223329503055933 0.227613903544001 0.223754256317939 0.223645522999724 0.226376907321750 0.233128150558408 0.230098035790780 0.234802469771367 0.228149288938042 0.225429286120614 0.221444768919030 0.224575820669024 0.219483864345501 0.226595690657309 0.219483864345501 0.222330415676989 0.224780373332901 0.223646850475728 3 3|0 +|/ 6023996 6024548 6024297.5 6023872 6024704 + gene protein_coding_gene FALSE TRUE AT3G17609.1|AT3G17609.2|AT3G17609.3|AT3G17609.4 HYH (HY5-HOMOLOG); DNA binding / transcription factor|HYH (HY5-HOMOLOG) Identical to Transcription factor HY5-like (HY5 homolog) (HYH) [Arabidopsis Thaliana] (GB:Q8W191;GB:Q8LB41;GB:Q9LUN6); similar to HY5 (ELONGATED HYPOCOTYL 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11260.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE88841.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -1.27867617549472 -10.1491512497495 6.97697642297374e-07 0.0106789601130036 10.23739521313 8.03263300710157 -1.27867617549472 0.159115274474418 AT2G40080_at 8.05661040813319 8.36659980077331 6.63566433146051 6.80843345904854 7.8621723479618 7.12886465219242 3.96543771320908 3.84952155217514 4.3266832039482 4.08720930053584 5.73587386448 5.92844684664635 4.79254586189247 5.3339049400548 5.86427342038145 5.00392530467322 5.13981747904478 5.50882754372894 3.7665859952168 0.345315314616883 0.360910469231051 0.324019995699369 0.324932562501851 0.358011263339466 0.331936241338156 0.327916912462825 0.329234663428255 0.332926133230972 0.326945053790573 0.317205124543101 0.317205124543101 0.319880402931635 0.317471947205859 0.317818405937506 0.317205124543101 0.317205124543101 0.317205124543101 0.336621239781421 2 2 - 16741624 16741927 16741765.909 16741372 16741990 - gene protein_coding_gene FALSE TRUE AT2G40080.1 ELF4 (EARLY FLOWERING 4) involved in photoperiod perception and circadian regulation. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29950.1); similar to Protein of unknown function DUF1313 [Medicago truncatula] (GB:ABE91668.1); contains InterPro domain Protein of unknown function DUF1313; (InterPro:IPR009741) 1.20126686840280 10.1451023287610 7.00465041240434e-07 0.0107206174561848 10.2350354475039 11.3209687368758 1.20126686840280 0.142401942438090 AT1G13950_at 5.48164681981975 5.43119427319224 5.87798124000418 5.92622187621679 5.23323810706559 5.22824932217332 3.77342123174246 3.81961343091107 2.95385828412805 2.94945735028784 3.88382647755049 3.16098655555945 3.40954172069638 3.70296080394237 4.40901078367473 3.78471530684096 3.73596515740291 4.35275595284076 3.38115992193407 0.215045786808036 0.221257276617723 0.222473198432916 0.214494184326626 0.209687578166029 0.229386408522016 0.209750023591543 0.20911440473069 0.227608495172307 0.220633989543555 0.209568566259748 0.213663822925356 0.216067308610516 0.213783264569587 0.214524576769172 0.209208046348681 0.222732348759847 0.209704819482715 0.214161865785213 1 1|0 +|/ 4773630 4774635 4774038.889 4773573 4774864 + gene protein_coding_gene FALSE TRUE AT1G13950.1 EIF-5A (eukaryotic translation initiation factor 5A-1); translation initiation factor Encodes eukaryotic translation initiation factor 5A (EIF-5A). Identical to Eukaryotic translation initiation factor 5A-1 (eIF-5A-1) [Arabidopsis Thaliana] (GB:Q9XI91;GB:Q9LMG2); similar to eukaryotic translation initiation factor 5A, putative / eIF-5A, putative [Arabidopsis thaliana] (TAIR:AT1G69410.1); similar to Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (GB:Q945F4); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Eukaryotic initiation factor 5A hypusine (eIF-5A); (InterPro:IPR001884); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain KOW; (InterPro:IPR005824) 0.825049428406054 10.1223514200796 7.16237818951211e-07 0.0109613035812293 10.2217474654332 8.54634355277242 0.825049428406054 0.0145110496103153 AT3G47420_at 7.1408833842 8.01684151090985 8.1229468126092 8.24386389202001 7.41293151225282 6.5428070252691 9.4608615347083 9.74587328168567 8.38956811069946 8.94934340809372 5.73652180234812 6.222231381162 7.19920704527587 6.4432549245487 4.99329867082135 8.4486689066167 7.84824897555037 6.19434122264265 9.02433529184528 0.246906932409562 0.237572392769675 0.25029407090915 0.239940428755188 0.246469330517218 0.249685341830070 0.250862082946358 0.251119196247770 0.254698063462248 0.240848653975144 0.241083530387436 0.242245841328327 0.240672970202263 0.246539560043751 0.245150348933774 0.242572767552534 0.253582916700501 0.237572392769675 0.237609486501957 3 3 - 17483577 17483951 17483794.909 17483327 17486243 - gene protein_coding_gene FALSE TRUE AT3G47420.1 glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative similar to transporter, putative [Arabidopsis thaliana] (TAIR:AT4G25220.1); similar to putative Glycerol-3-phosphate transporter [Oryza sativa (japonica cultivar-group)] (GB:BAC99502.1); similar to Os04g0555300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053515.1); similar to putative glycerol 3-phosphate permease [Zea mays] (GB:AAS82603.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -1.58125246904847 -10.1221294322032 7.16393601262673e-07 0.0109629712801227 10.2216175720424 15.7976113957070 -1.58125246904847 0.220281110848832 AT4G14580_at 4.08401826954868 3.98579861973104 5.05988748026379 5.27894537688252 5.48960122325575 5.44527982859651 4.05557584986731 4.17286430795958 4.73176137552377 5.03434733020828 6.36123633774302 4.71736841762191 5.60398600643818 5.89415720320764 4.44646251117148 5.43624471272203 5.99536681399536 5.37926893676208 5.19863365635007 0.238686379366526 0.225731198771465 0.234692940385305 0.2308032509027 0.238718809326241 0.238291707796853 0.240075270558404 0.225731198771465 0.234994012118134 0.234667203395088 0.229354973639925 0.230466441215421 0.229031151689882 0.233690848745928 0.227431500066642 0.225731198771465 0.231684554405086 0.236995649124436 0.227005108277120 4 4 - 8367925 8368413 8368199.364 8367883 8369163 - gene protein_coding_gene FALSE TRUE AT4G14580.1 CIPK4 (CBL-INTERACTING PROTEIN KINASE 4); kinase CBL-interacting protein kinase similar to CIPK7 (CBL-INTERACTING PROTEIN KINASE 7), kinase [Arabidopsis thaliana] (TAIR:AT3G23000.1); similar to CBL-interacting protein kinase 5 [Populus trichocarpa] (GB:ABJ91213.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.867439064451663 10.1017666995497 7.30840642934261e-07 0.0111833235181801 10.2096829392318 9.93025078025569 0.867439064451663 0.0468701649238726 AT3G14700_at 2.65097707559653 2.99150685253361 4.54519672044198 4.25463497997685 3.83394882790914 3.69643326840476 2.59768945298315 2.54729391116554 1.8423584587695 2.24445780766183 2.43922631106254 2.12392032510676 2.72325124237623 2.68367968974048 2.37206410758939 2.72797510046045 3.15724939484468 2.23679049656369 1.99615824765024 0.262815080305322 0.259774690311446 0.271014345953229 0.283533577564419 0.285983036700303 0.276446634277611 0.259467709394145 0.261336254554962 0.264855261251142 0.262689302358728 0.259986249393763 0.26337763212915 0.260300032646149 0.266248869347984 0.264180910857752 0.258268092157107 0.264808420700566 0.26266206080058 0.258880501315908 3 3 + 4940795 4941304 4941057.727 4940325 4941405 + gene protein_coding_gene FALSE TRUE AT3G14700.1 similar to SART-1 family protein [Arabidopsis thaliana] (TAIR:AT5G16780.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE84261.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE88274.1); similar to Os02g0511500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046936.1); contains InterPro domain SART-1 protein; (InterPro:IPR005011) 0.95802401911049 10.0937927203256 7.36583769749682e-07 0.0112704682609399 10.2049987719690 5.68254901354072 0.95802401911049 0.0815079922917535 AT1G02870_at 6.37140739723357 6.28738861817937 4.95080240552386 5.15575525404889 5.44569462455904 5.48715262799258 5.66930788738325 6.19341859806983 5.06854450143065 4.91340979132584 3.97960799352051 4.04652697471168 3.65326404684477 3.66615372770506 4.38754559344148 3.79346667077224 3.56388004172196 4.03577350911196 5.17992261151502 0.227052186419164 0.232533225892005 0.246135738778465 0.233371273563731 0.238460758427356 0.257256594389111 0.240256646226935 0.235579037547811 0.238770864390235 0.225207239506492 0.227192816630321 0.225207239506492 0.228274854592346 0.245618746893399 0.225207239506492 0.230444916257121 0.237868676307583 0.227690880860154 0.232355898563050 1 1 - 637458 638548 638238.727 637214 638677 - gene protein_coding_gene FALSE TRUE AT1G02870.1 similar to hypothetical protein MtrDRAFT_AC161032g9v1 [Medicago truncatula] (GB:ABE85046.1) -1.01685552277360 -10.0934883652978 7.3680394264392e-07 0.0112731003224520 10.2048198657666 10.1674840705334 -1.01685552277360 0.098728501447517 AT2G24850_at 5.91034034496877 6.87193084788066 10.6027372043917 10.6820032702858 3.16663182157586 3.05257340988546 1.31703155568175 1.16520204066142 2.39712948877752 1.95769438799673 1.48341213498408 1.81858008992984 1.73736185128643 1.56753216769976 1.53970720745643 2.45865577342258 1.36484573882830 1.9941315205964 2.12180602318476 0.365667490762471 0.354313533728956 0.337118016517078 0.33575626162955 0.327086292253861 0.329390209459238 0.326950073036384 0.322726301394858 0.340936296529345 0.322726301394858 0.322726301394858 0.322726301394858 0.325693296657078 0.322726301394858 0.324989526606651 0.323739915252957 0.333410107613046 0.332072469432877 0.322726301394858 2 2|0 -|/ 10590152 10591171 10590603.444 10589909 10592295 - gene protein_coding_gene FALSE TRUE AT2G24850.1 TAT3 (TYROSINE AMINOTRANSFERASE 3); transaminase Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. similar to SUR1 (SUPERROOT 1), transaminase [Arabidopsis thaliana] (TAIR:AT2G20610.1); similar to Os11g0552000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068082.1); similar to Os06g0345200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057579.1); similar to tyrosine aminotransferase [Glycine max] (GB:AAY21813.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005958); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 1.32325595322119 10.0862355585622 7.42071825723877e-07 0.0113529568617496 10.2005539363631 7.29825878383901 1.32325595322119 0.170175389496849 AT1G20630_at 10.5295775687133 10.5525037438399 10.9311301197091 11.0488668681066 10.8143811359576 10.7190317058128 9.68697018543868 9.56437478678602 8.9174461583741 8.42747827768373 9.59016955607442 8.68178261783166 8.93363990938015 9.33640976661125 9.09253128685622 8.5988024001682 9.51441091996764 9.98201034788892 7.63608299614461 0.134458973953082 0.129611680123183 0.134724789830882 0.129764144537311 0.134594046652658 0.129480792734305 0.132202022154903 0.128736752777629 0.13749744221928 0.146082870920686 0.129967754649438 0.131597979042101 0.135675579788695 0.137527841341648 0.143583134659242 0.135246312388314 0.137318840937804 0.130592003224971 0.155445785950484 1 1|0 +|/ 7148737 7149567 7148994.3 7146626 7149967 + gene protein_coding_gene FALSE TRUE AT1G20630.1 CAT1 (CATALASE 1); catalase Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2. Identical to Catalase-1 (EC 1.11.1.6) (CAT1) [Arabidopsis Thaliana] (GB:Q96528;GB:O22529;GB:Q9LDS9); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.1); similar to CAT3 (CATALASE 3), catalase [Arabidopsis thaliana] (TAIR:AT1G20620.1); similar to catalase [Raphanus sativus] (GB:AAF71742.1); similar to catalase [Prunus persica] (GB:CAD42908.1); similar to catalase [Brassica juncea] (GB:AAD17934.1); contains InterPro domain Catalase, N-terminal; (InterPro:IPR011614); contains InterPro domain Catalase; (InterPro:IPR002226) 0.84210650469927 10.0722646548320 7.52334548091229e-07 0.0115092139166996 10.1923226110562 19.2524655532946 0.84210650469927 0.0339596120349353 AT1G28230_at 8.79760986369154 8.99684112118747 9.48890296788105 9.23640204705824 9.4520269194377 9.02411771712234 8.69104044304447 8.5812137450632 5.91969623142437 7.85261509738018 8.00013338151216 8.08242921046216 8.76548698889482 8.42695217055312 8.0281351169555 8.96067704761412 8.9440739959443 8.52597789869786 7.23161803706857 0.159082814650043 0.153833572169733 0.153453546936067 0.156435111695307 0.158174485207719 0.155609541100013 0.155696006554956 0.161596907684831 0.203983976544921 0.164017836231628 0.167478279641035 0.159166100627741 0.16290175268753 0.162529856182575 0.157879858290371 0.153453546936067 0.159187337298397 0.161476223289430 0.175187898518698 1 1 - 9862199 9863960 9862875.273 9862060 9864593 - gene protein_coding_gene FALSE TRUE AT1G28230.1 PUP1 (PURINE PERMEASE 1); purine transporter Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation. similar to ATPUP2 (Arabidopsis thaliana purine permease 2) [Arabidopsis thaliana] (TAIR:AT2G33750.2); similar to Os09g0467300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063424.1); similar to Os09g0467400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063425.1); similar to putative purine permease [Oryza sativa (japonica cultivar-group)] (GB:BAD19737.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.999554778666525 10.0695196604277 7.54368972089237e-07 0.0115395821660491 10.1907031604844 16.7675408605376 0.999554778666525 0.0945673670942225 AT4G28250_at 2.89113364580953 2.91186315196265 2.29369280329632 2.3986942865152 2.46669516400625 2.78585934159821 3.60630040278062 4.28357100491491 2.63775350050913 3.34857352368418 5.62635288866698 7.70648451804748 5.92114211618279 6.81854608521787 7.56456239032663 6.012665088981 5.07151542292599 6.44146168222486 3.53890927262552 0.269169681011089 0.262823717385519 0.269742858928091 0.274600242642771 0.266961354234914 0.274014773452764 0.267036307136979 0.263360277197145 0.290999203549216 0.262823717385519 0.262823717385519 0.27075703241922 0.270249365365696 0.273177466343556 0.264202941058756 0.271073266760455 0.280004843368772 0.267499742534552 0.265049421259665 4 4|0 -|/ 14000479 14001544 14001063.889 14000044 14002075 - gene protein_coding_gene FALSE TRUE AT4G28250.1|AT4G28250.2 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. Identical to Expansin-B3 precursor (AtEXPB3) (At-EXPB3) (Beta-expansin-3) (Ath- ExpBeta-1.6) (EXPB3) [Arabidopsis Thaliana] (GB:Q9M0I2); similar to ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) [Arabidopsis thaliana] (TAIR:AT2G20750.1); similar to Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) (GB:Q7X6J9); similar to Os02g0639500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047539.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795) 1.14164042797625 10.0658369626567 7.57107729141103e-07 0.0115807198249423 10.1885293795558 7.73993624494945 1.14164042797625 0.130884282580144 AT1G66350_at 5.1963663996926 5.52870520053486 2.820916962015 2.84835069316236 3.18384071395992 3.29258365049755 4.01786408476370 4.04309013193391 5.19871074363356 4.11258502541112 4.90276775254913 5.7439313297281 4.70969378652786 4.65573635383232 5.26649825734463 4.87669261495124 3.53316052890717 5.06876943766332 5.6183293713629 0.240874035999138 0.240874035999138 0.251526706406890 0.242993923617106 0.248465727120892 0.244893170221103 0.248374602685732 0.240874035999138 0.263367704958690 0.252106627977528 0.247625950230079 0.240874035999138 0.246154421373446 0.255537840546394 0.247204476347824 0.240874035999138 0.240874035999138 0.240874035999138 0.240982320001996 1 1 + 24753004 24753490 24753235.273 24751858 24753705 + gene protein_coding_gene FALSE TRUE AT1G66350.1 RGL1 (RGA-LIKE 1); transcription factor Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. Identical to DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein) (RGL1) [Arabidopsis Thaliana] (GB:Q9C8Y3;GB:O65367); similar to RGL2 (RGA-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G03450.1); similar to DELLA protein [Malus x domestica] (GB:AAY56750.1); similar to GIA/RGA-like (GB:AAY28970.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) -0.89598445255189 -10.0631022061729 7.59148485972828e-07 0.0116111760929544 10.1869143091158 8.77706371514857 -0.89598445255189 0.0608559877973732 AT1G75900_at 9.59618311581252 9.85332670141111 10.4235076925041 10.4731655829026 11.3469414304684 11.0528740352353 10.6493678896884 10.5417486702298 9.95529293755616 9.89408435680973 11.3472032906866 10.9350936693189 10.9989924281915 11.3502451834149 10.8288864758659 10.0999842833849 10.5398140043323 11.1355464206909 9.32644262320248 0.0864243290152494 0.0858215358839113 0.0882463609593007 0.085202450275373 0.0846661758539058 0.0884552474563177 0.085471344652462 0.0844914931825499 0.0951399210571223 0.0881466538321895 0.0845183932221152 0.0844914931825499 0.0844914931825499 0.0866383508688228 0.0849142326829541 0.085448605826885 0.086061328975262 0.0865774734702774 0.0900353623038229 1 1 + 28503795 28504498 28504127.091 28502721 28504799 + gene protein_coding_gene FALSE TRUE AT1G75900.1 family II extracellular lipase 3 (EXL3) similar to family II extracellular lipase 1 (EXL1) [Arabidopsis thaliana] (TAIR:AT1G75880.2); similar to Lipolytic enzyme, G-D-S-L [Medicago truncatula] (GB:ABE88162.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087); contains InterPro domain 5' (InterPro:IPR006179); contains InterPro domain Lipolytic enzyme, G-D-S-L, active site; (InterPro:IPR008265) 0.921581502310894 10.0548451277986 7.65346395987413e-07 0.0117052077802315 10.182033616802 20.8070114024525 0.921581502310894 0.0706449451710742 AT4G20780_at 5.59855456120757 5.91002658696503 4.96174220310955 5.05515787634124 6.31648661497236 6.49040565694675 4.14053678609855 4.39508442288246 4.80175971871425 3.39278669201626 6.22818785835311 6.54268854477679 4.96029001347732 6.30170283825272 4.38286096927991 4.78610516079039 3.62804519424917 4.72685017483253 3.82759829585791 0.272267929660217 0.253600759975541 0.257978568552853 0.254678856897469 0.25657022481989 0.257851488509807 0.255944064421649 0.253053469295943 0.258862865476476 0.257865190824647 0.251900105513077 0.252411473598527 0.253607942577353 0.273216687560758 0.260939756253327 0.251900105513077 0.257984824916517 0.251900105513077 0.251900105513077 4 4 - 11133480 11133829 11133661.727 11133197 11133981 - gene protein_coding_gene FALSE TRUE AT4G20780.1 calcium-binding protein, putative similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G44460.1); similar to putative calmodulin-like protein [Populus x canadensis] (GB:CAG27612.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.941053636971381 10.0450600974098 7.72762252798078e-07 0.0118178531320410 10.1762414025169 9.95948579512259 0.941053636971381 0.0775438702943294 AT4G32870_at 7.63710266022425 8.18195436261261 6.42431770649658 6.69616303446707 4.70039366791782 4.57323797178053 6.79065122858729 8.19953906142875 6.23841992302147 5.97246271334823 4.23418901996465 4.48958561565045 4.59402865600497 4.69675689135263 3.68514569991064 4.14231011249947 4.52739747347511 4.84100428491004 5.54779409105696 0.216803967215891 0.219937176234939 0.222848126029913 0.230068650900996 0.217791639288435 0.223148750360077 0.2232227297351 0.223307209162391 0.223726221380216 0.215801493032721 0.215801493032721 0.217596884565971 0.219870299309433 0.220782052328859 0.215801493032721 0.217418466802645 0.222885043929558 0.222031166916916 0.215801493032721 4 4 + 15862217 15862586 15862392.364 15862147 15862745 + gene protein_coding_gene FALSE TRUE AT4G32870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25770.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78384.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) -1.81102021148447 -10.0182436195940 7.93487668389616e-07 0.012134013425014 10.1603208690842 11.8108505258710 -1.81102021148447 0.266520855480974 AT2G32150_at 9.58683804267421 9.64954562185028 11.3124124393446 11.3157090457200 11.3342136523928 11.1875851971476 10.6009687122555 10.4182876438315 10.5967403890327 10.6448456733225 11.1344381807587 10.8145846707054 11.2991588330242 11.2614459020170 10.5334075419705 11.3160153411556 11.2287173875994 11.0190176069672 10.5515218751677 0.0732349769773243 0.0671091083994609 0.0651489868028816 0.0646411694304498 0.0645681764133223 0.0672504789984955 0.0676646464777041 0.066995893105869 0.0738625950054934 0.0659891728374108 0.0643841499245364 0.0637012980212093 0.0657672868821022 0.0658793773084363 0.0645695868099879 0.0638928320746494 0.0671131341265959 0.0673788323431117 0.0651368751331753 2 2|0 +|/ 13666826 13667584 13667281.889 13666083 13667841 + gene protein_coding_gene FALSE TRUE AT2G32150.1 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to putative phosphatase [Phaseolus vulgaris] (GB:CAD57681.1); similar to putative hydrolase [Glycine max] (GB:AAM94615.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.850857807841081 10.0179978614459 7.93680366589856e-07 0.0121361664855255 10.1601746496777 21.5124704588349 0.850857807841081 0.041969015251087 AT1G09750_at 8.9669262921884 9.15025166929694 3.22811985986025 4.0306538773448 6.66925654010166 6.74451643744697 7.08965629049655 7.56062644061062 8.65018466049115 7.98490602583974 9.50719876133445 9.98090397564961 8.34002339558564 8.33689618934431 10.2971434815601 8.01457969459972 6.5555969219178 9.15010053681756 8.33517797669384 0.188188097394405 0.187986954451685 0.233473239444661 0.232891109067043 0.192368654737872 0.203855056208049 0.181803880729711 0.185045624383948 0.188011050849252 0.186413436755571 0.181803880729711 0.183960305423822 0.185883396381811 0.188497724530426 0.189099847495626 0.183210544689662 0.206156784424132 0.185416300622391 0.186912928142184 1 1 + 3158328 3158933 3158666.727 3157503 3159147 + gene protein_coding_gene FALSE TRUE AT1G09750.1 chloroplast nucleoid DNA-binding protein-related similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G54400.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71208.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -1.28717300626674 -10.0112407798477 7.98998474847122e-07 0.0122166866804125 10.1561521134199 15.2281150545563 -1.28717300626674 0.164642753582110 AT4G23290_at 9.21634787674448 9.58463959126852 8.15031895423978 7.68024869653654 8.91990298083941 8.58765545446174 10.8673443604745 10.6321130058060 11.0097985671396 10.8573397401259 10.5569513080656 10.6165609413329 10.4171609501567 10.4550871190799 10.3473301440362 10.6690006192476 10.0812326402126 10.3545009439832 10.883554903563 0.173920591992598 0.156646352634270 0.180960582431364 0.184994352449072 0.162682824246744 0.167383847321276 0.161715435029799 0.162094753757126 0.172392099205834 0.164936152085346 0.171200313769202 0.156646352634270 0.159582527017207 0.166878398647293 0.168056146044897 0.158300372743750 0.177872019721663 0.175899505442588 0.162051449149406 4 4 - 12177957 12178458 12178130.375 12177748 12180836 - gene protein_coding_gene FALSE TRUE AT4G23290.1|AT4G23290.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11460.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11480.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11460.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G11470.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.11012467036626 -10.0029671918198 8.05562748222822e-07 0.0123162488575787 10.1512208544932 19.8818842751500 -1.11012467036626 0.125070407217400 AT1G47890_at 2.83863970955341 2.78911979124772 5.22448470360234 5.30715837812755 2.86822465999891 2.75085062848368 0.725672593697552 1.30717244776355 1.28466284914576 1.78969948355145 1.94389298706361 1.12656945368654 1.17428875720084 1.16498094483429 1.61487750920826 1.17748370381404 1.26430156877703 1.52022257766712 1.25364751382272 0.276471886533458 0.285468051409709 0.325938814531021 0.321084179630387 0.296125731368129 0.283729584873548 0.276471886533458 0.288038657220058 0.286298561511236 0.276471886533458 0.29966105795773 0.284872324652805 0.282613958572436 0.279799446831106 0.276471886533458 0.276471886533458 0.307453398753708 0.284120920941441 0.279694729045694 1 1 + 17650127 17650499 17650300.7 17647645 17650704 + gene protein_coding_gene FALSE TRUE AT1G47890.1 disease resistance family protein similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G27060.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT2G15080.2); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G45616.1); similar to verticillium wilt disease resistance protein [Lycopersicon esculentum] (GB:AAK58682.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.02659284796453 9.99823250604149 8.09345507441095e-07 0.0123732741177595 10.1483959236153 4.38441393237006 1.02659284796453 0.104006558746215 AT1G53160_at 6.87965476134522 6.27181695694806 7.52488326463735 7.78835603524152 8.98744093677544 8.43616963267647 9.4485926952210 9.40943794677327 9.78034501013008 10.0734109347449 7.65583159238767 6.05429328716722 7.08689635130672 7.21905199695854 5.8583633844567 7.19786603938656 7.9734054841595 6.44537201829691 8.78371158566319 0.244148401195792 0.239090332060378 0.247386210318892 0.232350785403471 0.235242627886461 0.244082477380638 0.238413235237679 0.237601314988895 0.237772178694492 0.235467080967301 0.235345246339427 0.236439380348048 0.240696270202116 0.239287358860434 0.245063666845268 0.230341383945976 0.241852747517628 0.244175598585773 0.232299977512981 1 1|0 +|/ 19810261 19810706 19810439 19810087 19811276 + gene protein_coding_gene FALSE TRUE AT1G53160.1|AT1G53160.2 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor|SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. Identical to Squamosa promoter-binding-like protein 4 (SPL4) [Arabidopsis Thaliana] (GB:Q9S7A9;GB:Q9SMX8); similar to SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G15270.1); similar to Chain A, Solution Structure Of The Dna-Binding Domain Of Squamosa Promoter Binding Protein-Like 4 (GB:1UL4); contains InterPro domain SBP; (InterPro:IPR004333) -1.2138003068268 -9.99075821313415 8.153562719316e-07 0.0124643513290184 10.1439320509786 16.3343977934245 -1.2138003068268 0.149300933407350 AT3G48500_at 4.76697017129237 5.21176422048447 4.21506238983529 4.52213595040245 4.07562111891348 4.16727047171120 5.22882062243123 4.86372132083899 4.12216122283802 4.83903030561986 2.94179237961079 3.34600442951536 2.96780852651289 2.80528573289183 3.97287635371623 3.60678549162994 3.83674978875624 3.14012513561027 5.08062214961912 0.232751875487294 0.221980460410788 0.2259134447316 0.225174352604882 0.231286687794684 0.228797560325264 0.228547229085663 0.221980460410788 0.227393246405821 0.221980460410788 0.233228601819365 0.226048820860998 0.2339001673896 0.239234569423783 0.221980460410788 0.228723696756512 0.221980460410788 0.235993550904825 0.223201725147467 3 3|0 +|/ 17975490 17976354 17976055 17973148 17976598 + gene protein_coding_gene FALSE TRUE AT3G48500.1|AT3G48500.2 PDE312/PTAC10 (PIGMENT DEFECTIVE 312); RNA binding|PDE312/PTAC10 (PIGMENT DEFECTIVE 312) similar to B1065G12.12 [Oryza sativa (japonica cultivar-group)] (GB:BAB90530.1); similar to CONSTANS interacting protein 5 [Lycopersicon esculentum] (GB:AAS67373.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029)|similar to B1065G12.12 [Oryza sativa (japonica cultivar-group)] (GB:BAB90530.1); similar to CONSTANS interacting protein 5 [Lycopersicon esculentum] (GB:AAS67373.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -1.06311134031236 -9.98228101077257 8.22232129884509e-07 0.0125686403374146 10.1388627323425 8.6353123028084 -1.06311134031236 0.113984188292698 AT2G30870_at 11.3650869307078 11.3615386174961 11.6882191502794 11.6817799401434 11.567389111937 11.3180319435656 10.4154926000943 10.3073902760925 9.99443940512994 10.3665231050302 11.1424128248746 11.4833817149090 10.9007305469911 11.1336560565121 11.1385236477414 11.1106371734282 10.8034068219363 11.0725489658118 9.89607121624987 0.112298435764721 0.108106032690058 0.118761416814524 0.114036225177668 0.111670624059811 0.118706553695518 0.108524302140506 0.114154992924060 0.118235160673457 0.115314530149650 0.114568533740612 0.106426995727162 0.108570319035072 0.113118432089477 0.107600858856677 0.10385316069346 0.110160298784897 0.105289926359430 0.118150616513404 2 2|0 +|/ 13148684 13149436 13149143.111 13148434 13149690 + gene protein_coding_gene FALSE TRUE AT2G30870.1 ATGSTF10 (EARLY DEHYDRATION-INDUCED 13); glutathione transferase early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002) Identical to Glutathione S-transferase ERD13 (EC 2.5.1.18) (GST class-phi) (ERD13) [Arabidopsis Thaliana] (GB:P42761); similar to ATGSTF9 (Arabidopsis thaliana Glutathione S-transferase (class phi) 9), glutathione transferase [Arabidopsis thaliana] (TAIR:AT2G30860.1); similar to glutathione S-transferase [Pyrus communis] (GB:ABI79308.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.856981120302946 9.97577391852598 8.27552624281955e-07 0.0126491418621497 10.1349668508568 21.8050361352040 0.856981120302946 0.0470502386640965 AT1G75180_at 8.34179443084185 8.38692392698438 7.48208063432205 7.2634493023823 7.94868173818075 7.7703900358366 9.06421498313652 8.9402111010091 8.76503051580055 8.47996079245909 8.20008727188261 7.98243679943475 8.23691868105032 7.86335080227005 7.98820778350562 8.20618858174313 7.98981466195453 7.84913574612528 8.90127505706013 0.169703829183514 0.166440329943425 0.171216036171219 0.176068070556373 0.179956734946973 0.172439871532949 0.177651218808606 0.174727859901855 0.175665340579474 0.165864913260288 0.166177982032358 0.165346386888119 0.165991809662860 0.173427957917492 0.170304034372750 0.164546497769669 0.17285039335434 0.170515191033526 0.169591990078529 1 1 - 28219838 28221080 28220687.091 28219497 28222462 - gene protein_coding_gene FALSE TRUE AT1G75180.1|AT1G75180.2|AT1G75180.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65010.1); similar to Os03g0775600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051432.1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996:SF1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE82722.1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996:SF1); contains domain 2-HYDROXYACID DEHYDROGENASE (PTHR10996) -0.871520131795005 -9.97473879939443 8.28402416146627e-07 0.0126613025283851 10.1343467365774 16.5271881004712 -0.871520131795005 0.0538979089755983 AT3G56400_at 11.6907990244044 11.9346096704678 12.7397432864554 12.5948814499862 11.5807646544382 11.2344090127443 10.1922778446792 10.0967987134921 10.4559030362905 9.07834827868771 10.8256868649736 10.5462636509650 10.2681542142856 10.8588151191217 9.65150743874562 10.5224759716179 10.4095519572965 11.3748423294258 9.67677639469188 0.0888961812758214 0.0894149609935947 0.0897448933321936 0.0905958865075164 0.0909241402075314 0.096542686297177 0.092490151083836 0.089670349610285 0.101619383562914 0.0984786116344823 0.0948234162811028 0.0888961812758214 0.0888961812758214 0.09119320449695 0.0942264874807705 0.0888961812758214 0.0921990812625358 0.094850995764267 0.0928156563915688 3 3 - 20920082 20920754 20920352.818 20919907 20921460 - gene protein_coding_gene FALSE TRUE AT3G56400.1 WRKY70 (WRKY DNA-binding protein 70); transcription factor member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. Identical to Probable WRKY transcription factor 70 (WRKY DNA-binding protein 70) (WRKY70) [Arabidopsis Thaliana] (GB:Q9LY00;GB:Q8LB71); similar to WRKY54 (WRKY DNA-binding protein 54), transcription factor [Arabidopsis thaliana] (TAIR:AT2G40750.1); similar to DNA-binding protein 3 [Nicotiana tabacum] (GB:AAF61863.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.939490622196208 9.97395453054586 8.2904689901562e-07 0.0126703237576557 10.1338768319509 21.6551211720138 0.939490622196208 0.0792104823098986 AT1G51610_at 8.85939331794371 8.7573328881712 8.17148456485409 7.73332966362359 8.65565078919857 8.45718238738472 7.07311028220303 7.0400798088776 5.95054820916016 6.07148420049514 7.45311343679949 7.87756186957938 7.37922565318558 7.63916326044697 7.53192959992887 7.00960808530796 7.40321435387672 7.20623907892703 5.5040174457468 0.203152043270035 0.203035687119195 0.200074017598820 0.214273807863004 0.203326914930363 0.197121752248341 0.204959327289401 0.205778070576417 0.209065829138061 0.219544874994545 0.204050908538672 0.201716040026313 0.197037954243404 0.207625977849484 0.197523549714403 0.201566337562823 0.202000161077202 0.211066142549818 0.218157543603521 1 1|0 +|/ 19142016 19143243 19142640.125 19140069 19143586 + gene protein_coding_gene FALSE TRUE AT1G51610.1 cation efflux family protein / metal tolerance protein, putative (MTPc4) Identical to Metal tolerance protein C4 (AtMTPc4) (MTPC4) [Arabidopsis Thaliana] (GB:Q8H1G3;GB:Q949W1;GB:Q9C531); similar to Membrane protein HUEL (cation efflux superfamily) (ISS) [Ostreococcus tauri] (GB:CAL50050.1); similar to Os04g0298200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052402.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) 0.958711537877744 9.97362465871402 8.29318137563331e-07 0.0126736397782428 10.1336791674009 14.733207230644 0.958711537877744 0.0852857150576193 AT3G10250_at 8.3369151615453 8.3991778354884 9.0935965611772 9.05129378380713 9.3694148788931 9.19562665308037 8.15491066094288 7.71191643253518 6.16292736894701 6.97598930975291 7.4594515919225 6.80223657472662 7.53928403106529 7.69855481612115 7.36089659979552 8.03726440995846 8.51792055099537 7.39868331749147 7.03712699388138 0.217260645008904 0.210854150264247 0.223528941690582 0.215734835539121 0.210854150264247 0.217727265166775 0.212206649882949 0.213344508971148 0.260935312530699 0.216627137726732 0.217380957752445 0.211542744371445 0.216802363411315 0.216350050277410 0.216479188676542 0.210854150264247 0.225121452479103 0.226600754446789 0.216664913440990 3 3 - 3168656 3169249 3169045.727 3167956 3170934 - gene protein_coding_gene FALSE TRUE AT3G10250.1|AT3G10250.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04090.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10374.1); similar to Os02g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045827.1); contains InterPro domain Conserved hypothetical protein 1589, plant; (InterPro:IPR006476) 0.951595771130308 9.96369870779379 8.37524909018795e-07 0.0127982181347162 10.1277264822961 15.8276736846187 0.951595771130308 0.0833743533332367 AT1G48000_at 3.65672278728599 3.8130769876115 5.28567670524541 5.72256515814209 5.22930738372543 4.91547844108287 1.78471926245504 2.49206483320034 1.82620665538508 1.64546565895161 1.38482715140836 1.77518336416031 1.61460363832523 1.72723975403011 1.60363117459496 1.66214341465225 1.98265396290654 2.11221412219589 1.33778538198231 0.269925722215606 0.270215714661741 0.274324970262717 0.290999058719241 0.274989330789966 0.283285910713254 0.268665835369834 0.267363755966522 0.269143720053445 0.273096751304257 0.26945802966924 0.279261748728308 0.267289068723106 0.270928696065928 0.267314797116994 0.273141759602724 0.265018878899959 0.267123073198153 0.268010856893567 1 1|0 -|/ 17708049 17709889 17708560.1 17707848 17710129 - gene protein_coding_gene FALSE TRUE AT1G48000.1 MYB112 (myb domain protein 112); DNA binding / transcription factor Encodes a putative transcription factor (MYB112). similar to MYB108 (BOTRYTIS-SUSCEPTIBLE1, myb domain protein 108), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06490.1); similar to Cpm7 [Craterostigma planta (GB:AAB58314.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 1.24063523087764 9.95567696591797 8.44221537590807e-07 0.0128997050943875 10.1229088395348 5.78043376395552 1.24063523087764 0.156147149117435 AT3G07640_at 8.2617159755393 8.37152573168571 8.57821924557326 8.56098204856835 9.04882264911211 8.78467728238479 7.41972863410927 6.84238507610159 6.09267224305714 6.18920242708493 7.13195085737731 7.15870055687149 6.98222416675267 7.47831180893977 7.43796586384819 7.28093693292707 7.39458775540025 7.11291538471307 6.21507048336705 0.199154620008227 0.191069557909781 0.195748017010411 0.195805213038572 0.19766803250528 0.197624041853558 0.19452423642308 0.205958367497962 0.201028662560733 0.197895195339807 0.196198234367824 0.189642923970728 0.196153331879860 0.200864166372704 0.190651824640740 0.192888483625950 0.190782796568670 0.195221546234276 0.193156599404566 3 3 + 2438410 2439557 2439193.818 2438138 2439889 + gene protein_coding_gene FALSE TRUE AT3G07640.1 similar to Os02g0582400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047253.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73827.1) 1.05044361670067 9.9525089704571 8.46882161600184e-07 0.0129395125470892 10.1210045181853 14.9399308555627 1.05044361670067 0.111543586349394 AT1G20693_at 11.1696221124056 11.2670406937970 11.3407524039415 11.2973424366461 11.5737034971184 11.4011446355058 10.5067164544598 10.6607891929306 9.76857281159471 9.61198250576698 10.7739596428764 10.9615969400976 11.0831347192071 11.0432450776146 10.7575891844285 10.8809559019677 10.4731894631882 10.4315297914430 9.43505184451014 0.0803567402011713 0.0774844456543033 0.0805541727760304 0.0780219799473129 0.0785887220841772 0.0855909384476146 0.0785047139481433 0.0784357561073069 0.084028923076905 0.07945732434745 0.0780656382962885 0.0774844456543033 0.0774844456543033 0.0800796339072674 0.0779775128792869 0.077593121744331 0.0830466288908394 0.0800794529665331 0.0791019691751539 1 0|1 /|+ 7177409 7178112 7177632.125 7176765 7178810 + gene protein_coding_gene FALSE TRUE AT1G20693.1|AT1G20693.2|AT1G20693.3 HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor|HMGB2 (HIGH MOBILITY GROUP B 2) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. similar to HMGB3 (HIGH MOBILITY GROUP B 3), transcription factor [Arabidopsis thaliana] (TAIR:AT1G20696.1); similar to HMG1/2-like protein (SB11 protein) (GB:P26585); contains InterPro domain High mobility group box HMG1 and HMG2; (InterPro:IPR000135); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.848820666358489 9.94800742416041 8.50678389861332e-07 0.0129966644403014 10.1182969175374 21.3550651670473 0.848820666358489 0.0440830303618885 AT2G06925_at 6.98024210795568 7.62079418590883 5.08583690840873 5.34788276819966 7.03204318804737 6.27733756353081 2.56806624004411 3.15307054644018 6.12863499696295 5.02305121408266 8.46849287474434 8.83479304959412 6.89172001533943 7.93033026570614 8.72181707251173 6.4883610496255 4.94882242150341 7.5045220821673 5.01130135022123 0.245817756633497 0.246020976418909 0.248893669028322 0.255897850404687 0.243071248987845 0.259122796345792 0.264983700332277 0.257447887293426 0.251219838387581 0.255179853464963 0.243071248987845 0.250494739355618 0.243071248987845 0.260854351620967 0.243071248987845 0.243071248987845 0.261929117434865 0.243071248987845 0.251521016641349 2 2|0 -|/ 2842479 2843133 2842739.556 2842350 2843298 - gene protein_coding_gene FALSE TRUE AT2G06925.1 ATSPLA2-ALPHA/PLA2-ALPHA (PHOSPHOLIPASE A2-ALPHA); phospholipase A2 Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine. similar to phospholipase A2, putative [Arabidopsis thaliana] (TAIR:AT4G29470.1); similar to putative phospholipase A2 [Dianthus caryophyllus] (GB:AAC69277.2); contains InterPro domain Phospholipase A2; (InterPro:IPR001211) 1.47058833521808 9.94244084729116 8.55398276300695e-07 0.0130679194670457 10.1149460142542 11.9387941257276 1.47058833521808 0.204086088969032 AT4G11890_at 8.37834957212787 8.37893555283207 9.8616761276599 9.50182323798211 7.43985245255535 6.74446603296191 3.19000719492722 2.98012059570577 5.61287236138889 3.58541616353907 4.21241061210749 4.56303533226584 2.68386953802221 3.91476309537023 3.25085364442763 4.07675125538286 3.76181799788317 3.54052583290545 3.01074200141366 0.292073078157587 0.291936564153587 0.303595767079655 0.297370224672311 0.294465592331262 0.295655578370379 0.274417887018502 0.274417887018502 0.280273334307046 0.279400084303064 0.274417887018502 0.274417887018502 0.29571427686283 0.278411294265647 0.278598748007575 0.274417887018502 0.282095075809667 0.290319787013434 0.275473305671895 4 4|0 +|/ 7149019 7149693 7149410.2 7148240 7149915 + gene protein_coding_gene FALSE TRUE AT4G11890.1|AT4G11890.2|AT4G11890.3 protein kinase family protein similar to EMB1290 (EMBRYO DEFECTIVE 1290), kinase [Arabidopsis thaliana] (TAIR:AT4G23250.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.16796390266166 9.94226454658256 8.55548223720724e-07 0.0130693546655578 10.1148398378951 10.9694939736738 1.16796390266166 0.140282032519088 AT3G59900_at 1.18680343378117 1.70992031806638 1.94642495878703 1.70296689781762 1.66721879684943 1.25059017656142 1.39950068601644 1.17788519161402 2.00057740190457 1.86594695291411 3.67663593147996 3.08967004905799 3.65225399240367 3.74852264325235 3.68028285203219 5.51715697144255 4.37716643946576 4.02615058582562 2.14991315029187 0.27455047284014 0.276938113299213 0.276274084057827 0.277801769083024 0.275595928373955 0.27380840802557 0.287375686035781 0.274067884081714 0.274468540019195 0.279155410157342 0.290704853913068 0.275488554377678 0.283747798553295 0.282129457752901 0.285452781990376 0.301283779169131 0.28323904910162 0.284752862616845 0.27380840802557 3 3 + 22141116 22141384 22141226.545 22140703 22141441 + gene protein_coding_gene FALSE TRUE AT3G59900.1 (ARGOS); unknown protein Auxin-inducible gene ARGOS controls lateral organ size similar to ARL (ARGOS-LIKE) [Arabidopsis thaliana] (TAIR:AT2G44080.1); similar to hypothetical protein LOC_Os12g10750 [Oryza sativa (japonica cultivar-group)] (GB:ABA96704.1); similar to Os11g0247000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067611.1); similar to Os04g0444300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052892.1) 1.1193867824421 9.93963001736118 8.57792339254466e-07 0.0131027779821120 10.1132528458914 4.49339335818179 1.1193867824421 0.128994340070762 AT3G22160_at 5.8329189579861 6.03915800408617 7.51272395302061 7.74939829750882 5.22223487867541 6.289125288519 3.40602503407345 3.62792927627227 3.72079777457196 3.28383811289953 3.85503686232679 3.47583539512572 4.11620538110935 4.19416627712344 3.99980270004857 4.20050094011923 6.04100766747772 4.04040033257886 3.03273006126251 0.3143100645553 0.315445240852744 0.33846019264377 0.339645909721179 0.321530918266701 0.320720002879566 0.312684938683578 0.312684938683578 0.319601204141762 0.315299013745803 0.312684938683578 0.315645747273693 0.312684938683578 0.312684938683578 0.318551301473435 0.312684938683578 0.312684938683578 0.313017063852789 0.316066127966417 3 3 - 7818221 7818703 7818452 7817864 7818992 - gene protein_coding_gene FALSE TRUE AT3G22160.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT4G15120.1); similar to Os02g0173200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046037.1); similar to VQ [Medicago truncatula] (GB:ABE94086.1); similar to Os06g0666400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058308.1); contains InterPro domain VQ; (InterPro:IPR008889) 1.43072179061859 9.93836430988593 8.5887274605742e-07 0.0131184223232810 10.1124901683295 9.50301825830108 1.43072179061859 0.196250850457076 AT1G09420_at 3.3093917142944 2.93681549955563 4.57444001431822 4.5379827491799 4.28241222351282 3.74224415189931 2.31246970802089 2.2529173557744 2.32747484277171 2.4653953305056 2.51865847252129 3.03499556029175 3.22160378339717 2.96030696610663 2.79804337780159 3.19208798035006 3.34096874520667 2.71131889189877 2.52048437750229 0.200855108591709 0.197428714516915 0.207479274994300 0.202568959203201 0.205231789444083 0.19830292804711 0.199584724119138 0.205093585151082 0.199079569660888 0.202061620442952 0.200714791789174 0.197428714516915 0.201066871889055 0.204181079533329 0.202818610522159 0.197428714516915 0.206153750281341 0.197428714516915 0.200314013499346 1 1 - 3038645 3039375 3039024.364 3038464 3041821 - gene protein_coding_gene FALSE TRUE AT1G09420.1 G6PD4 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4); glucose-6-phosphate 1-dehydrogenase Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally. Identical to Glucose-6-phosphate 1-dehydrogenase 4, chloroplast precursor (EC 1.1.1.49) (G6PD4) (G6PDH4) [Arabidopsis Thaliana] (GB:Q93ZW0;GB:O80525); similar to G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2), glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana] (TAIR:AT5G13110.1); similar to Os03g0318500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049944.1); similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD) (GB:O24357); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) 1.05791716862655 9.92562612336539 8.6982845672314e-07 0.0132848900195325 10.104805885631 6.19860058829775 1.05791716862655 0.114199059309563 AT3G28840_at 1.29833080484353 1.12452153665799 1.08676713240195 0.825779887549465 0.614205358395065 0.813218872566554 2.97903619517616 3.40178138119247 1.48313036041325 2.22830694908224 1.06187177021120 0.670112414705115 0.815088289606773 0.582058050192747 1.34056542612333 0.826277441385673 1.34066375725360 1.47981022429523 1.20506808572601 0.234547108971791 0.230998025079476 0.234193356975870 0.230134882012435 0.229414485827519 0.238286838847938 0.245875772580082 0.272115314531234 0.240334693401151 0.234714325308333 0.230569878880609 0.229414485827519 0.241527238258576 0.229414485827519 0.232130432572173 0.231758114405461 0.234947248212155 0.238738931252248 0.235419678069127 3 3 + 10840424 10840939 10840697.455 10839646 10841183 + gene protein_coding_gene FALSE TRUE AT3G28840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28780.1); similar to EBNA-1 [Human herpesvirus 4] (GB:ABB89251.1); contains InterPro domain Protein of unknown function DUF1216; (InterPro:IPR009605) -0.995101938379036 -9.92521441998194 8.70185064678532e-07 0.0132894663077705 10.1045572642936 2.844650672829 -0.995101938379036 0.097379794493994 AT3G27580_at 3.45866637842399 3.2275681676769 4.64405498454496 4.45604114653952 5.02026827085876 5.47626682044813 3.38457007579621 3.676246274974 4.38658938676507 3.93747554954166 4.75417553228653 4.21382238870853 4.34226327876623 4.75193141934845 4.79620586969206 4.922376674536 5.47913881772433 5.38929616506728 4.37710079160503 0.229675963758911 0.231951075647322 0.233452067666261 0.229172422680672 0.240727893549873 0.239673517147751 0.234744639966798 0.237613098861805 0.234648914037219 0.225978715471485 0.232371005904089 0.228015584457632 0.229600710330970 0.223466956730227 0.230795264581192 0.223466956730227 0.228640184754182 0.236402888668804 0.224535677162935 3 3 - 10218998 10219454 10219224.727 10218654 10221213 - gene protein_coding_gene FALSE TRUE AT3G27580.1|AT3G27580.2 ATPK7 (Arabidopsis thaliana serine/threonine-protein kinase 7); kinase a member of a subfamily of Ser/Thr PKs in plants. Identical to Putative serine/threonine-protein kinase PK7 (EC 2.7.11.1) (PK7) [Arabidopsis Thaliana] (GB:Q05999); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to stpk1 protein kinase [Solanum tuberosum] (GB:CAA62476.1); similar to Protein kinase PVPK-1 (GB:P15792); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.02991222017116 9.92459073760412 8.70725585510927e-07 0.0132968504163374 10.1041806008052 8.70039685369286 1.02991222017116 0.106925555658363 AT3G50240_at 5.04224007883059 4.73055026590898 2.91333200308087 2.77844959517261 3.69651223406019 3.589700866883 4.22352054372286 4.09173913043745 5.46413624445374 5.63533261437244 5.28715335259972 6.55069073891347 4.7613161489201 5.01499669442456 5.88241121084234 4.491008258638 4.0739482335475 4.48807205712628 5.64975500032098 0.235809071258354 0.232902468851742 0.232501275274204 0.237463995940103 0.23941650637539 0.241860913135965 0.230230011580489 0.234930504782202 0.245136120069407 0.230720117972294 0.235815578615206 0.233482353099241 0.239937345427665 0.244566677676195 0.235639176993141 0.230230011580489 0.250647341332993 0.231204351089957 0.2468225888126 3 3|0 -|/ 18634369 18635119 18634658.9 18634244 18639864 - gene protein_coding_gene FALSE TRUE AT3G50240.1 KICP-02; microtubule motor Encodes a kinesin-related protein. similar to chromosome-associated kinesin, putative [Arabidopsis thaliana] (TAIR:AT5G60930.1); similar to FRA1 (FRAGILE FIBER 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT5G47820.2); similar to kinesin-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72688.1); similar to Os09g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062580.1); similar to putative KIF4 [Oryza sativa (japonica cultivar-group)] (GB:BAD16508.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.89594443138251 -9.92270081623682 8.72365726596539e-07 0.0133210246451292 10.1030389812435 9.20914269305817 -0.89594443138251 0.0656967136658266 AT3G52750_at 8.35208949722655 8.45263317724849 7.21906501402086 6.99737901438797 7.4085065755014 7.31936640213401 9.15140329363985 9.13944014872611 8.85940363233663 9.3539866966908 8.95918100675743 9.34859145591987 8.67331158473373 8.73419287526882 9.20197591782321 9.18287449365139 8.06418128490142 9.21703094890107 9.03036389724361 0.138565997469748 0.144522158910845 0.157505928478365 0.170368563622796 0.160647075094916 0.146042979408238 0.138511535666408 0.147911330603934 0.154455858450916 0.142961528668691 0.139447885194246 0.13751676922435 0.140641453759106 0.14220898366948 0.144722520342342 0.13751676922435 0.163915996598049 0.144498504191358 0.142565328160001 3 3|0 -|/ 19560863 19562189 19561379.333 19560639 19563992 - gene protein_coding_gene FALSE TRUE AT3G52750.1 FTSZ2-2 (FtsZ2-2); structural molecule Nuclear gene that encodes a plastidial division protein (FtsZ2-2). similar to FTSZ2-1 (FtsZ homolog 2-1), structural molecule [Arabidopsis thaliana] (TAIR:AT2G36250.2); similar to Cell division protein FtsZ [Medicago truncatula] (GB:ABE77845.1); similar to FtsZ-like protein [Nicotiana tabacum] (GB:CAC44257.1); similar to chloroplast FtsZ-like protein [Nicotiana tabacum] (GB:CAB89288.1); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Cell division protein FtsZ; (InterPro:IPR000158); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280) -0.848198120230793 -9.92232575948455 8.72691611819712e-07 0.0133251282208752 10.1028123845318 17.0069448177365 -0.848198120230793 0.0449085359761614 AT1G64500_at 8.09741611673159 8.23649597065742 8.84720793676464 8.6544878220258 8.5887874182008 8.28750292222125 10.3654304760777 10.3822065623422 10.4579549334449 10.6916037947563 9.19055573488 8.77203792209954 9.906427177601 9.4652932094584 8.66753764215084 10.1905449329500 10.2864832551180 9.61182841396748 10.7415270059861 0.139544957393942 0.129406824035474 0.133206112852455 0.132595870078084 0.137590314199659 0.135018207303991 0.136260652273287 0.134082903703229 0.132168875653419 0.133632584403251 0.128031454754687 0.130816769384152 0.127542175893884 0.127542175893884 0.129005086716307 0.130010124910634 0.134232880864608 0.127644884936338 0.135261001190959 1 1 + 23957503 23958002 23957752.182 23956896 23958155 + gene protein_coding_gene FALSE TRUE AT1G64500.1 glutaredoxin family protein similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G10630.1); similar to Os01g0235900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042526.1); similar to hypothetical protein MtrDRAFT_AC139526g15v1 [Medicago truncatula] (GB:ABE80146.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin-related protein; (InterPro:IPR004480) -0.89745706600835 -9.91658643828523 8.77694959862054e-07 0.0134006466471738 10.0993431768709 19.0032921268396 -0.89745706600835 0.0664714729555346 AT1G49660_at 5.49167588738373 5.69376876356314 6.64798977515225 6.5786579109374 6.66535481568469 6.80217711292565 7.42047640682824 7.24622241092212 6.48723979286504 6.76480933707336 8.13017773361257 7.68162268618808 8.2012387493698 7.81747702330126 7.84165312258328 8.75976201133405 8.83451566370151 8.05530839325101 6.69656315571671 0.202509556321608 0.207138364575644 0.206774356701618 0.20910687271812 0.201569243287752 0.205785610401356 0.210073408187695 0.203462110305299 0.206693238923954 0.209128266454384 0.202154008109118 0.201092271708026 0.200379469783664 0.204712043754156 0.204491279294287 0.202266386414437 0.20362645139756 0.220244602921181 0.207301557791431 1 1 - 18382507 18383020 18382811.273 18382365 18383467 - gene protein_coding_gene FALSE TRUE AT1G49660.1 similar to cell death associated protein-related [Arabidopsis thaliana] (TAIR:AT1G49650.1); similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABE83375.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.86309551543334 9.89451151641465 8.97230579717997e-07 0.0136980192605547 10.0859698682200 13.9756688111593 0.86309551543334 0.05326408734481 AT3G21750_at 6.648087865945 7.09833483044746 5.46926320269381 6.21043299982103 5.6340002470322 5.58395740196981 7.04430248675726 7.34246505093332 6.17424765359524 6.53422674251998 4.48789606560128 4.75269519161815 4.59739200121763 4.52583663971383 4.69780167085664 5.76976934537127 5.20114774705266 5.44303829602588 5.63759482122783 0.212517966492529 0.210844953867140 0.210877051805429 0.208972389574235 0.206531278751206 0.214374139618964 0.209596561155126 0.215986826701501 0.219026778184753 0.215391482172766 0.218221952081403 0.205103248397437 0.210148404067412 0.209201476722095 0.207983571941699 0.209939181685337 0.208301428340820 0.213989672479390 0.207942956831521 3 3 + 7665419 7665933 7665634.091 7664352 7666202 + gene protein_coding_gene FALSE TRUE AT3G21750.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT3G21760.1); similar to glucosyltransferase NTGT3 [Nicotiana tabacum] (GB:BAB88934.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.24489669087020 -9.88765505064061 9.03393767981447e-07 0.0137912092620048 10.0818064631538 11.9037572734316 -1.24489669087020 0.158933557590586 AT2G45220_at 4.68260894901328 5.35359663589937 7.24750577392449 7.80343846881053 5.33016243044297 4.85848921436723 1.57896712913944 1.58533609446597 1.21861283544327 2.43559945513026 1.41179747296497 0.973053446433005 1.58682130968111 1.08489281742788 1.38057066237157 0.905548987963794 1.86429883870061 1.58285624665112 1.61009468040760 0.374460005760916 0.360619576674068 0.390291376667860 0.375167421320274 0.367049353342312 0.376424142039217 0.345293473648159 0.345352753468196 0.350631746791555 0.345293473648159 0.345293473648159 0.345293473648159 0.345293473648159 0.356667802512334 0.345293473648159 0.345293473648159 0.345293473648159 0.35015185627497 0.345293473648159 2 2 - 18651375 18651922 18651652.364 18651158 18653521 - gene protein_coding_gene FALSE TRUE AT2G45220.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51490.1); similar to pectinesterase (EC 3.1.1.11) PECS-c2 - sweet orange (GB:T10494); similar to Pectinesterase-2 precursor (Pectin methylesterase) (PE) (GB:O04887); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501); contains InterPro domain Carbohydrate-binding and sugar hydrolysis; (InterPro:IPR006633) 1.30186637610200 9.8765576435154 9.13466428787238e-07 0.0139440650354372 10.0750581360843 6.35676256855856 1.30186637610200 0.171472794339822 AT1G20070_at 10.0229538761547 9.9173064795941 11.4634587885936 11.3839828731373 11.9539409954712 11.4782151460141 12.0424635717251 12.1045987841215 9.67060127285342 10.5639550835640 11.3153451387658 10.7561123684095 11.7746307725356 11.5185997400169 10.6472664434729 11.6806850891456 11.9686365333298 11.4107444881709 9.85453496542228 0.0766906435420046 0.0794692787427521 0.0732988425354031 0.07627756025178 0.0745223301856962 0.0752655365267213 0.0741489533873358 0.0734158753919716 0.092200055465697 0.0766089487824719 0.0724424464511342 0.0723375817620669 0.0717514288530009 0.0796995810420966 0.0752743670267367 0.0724374216133728 0.0760876675811948 0.0735992305102583 0.0735715335005526 1 1 - 6958239 6958719 6958471.727 6958001 6959114 - gene protein_coding_gene FALSE TRUE AT1G20070.1 unknown protein 0.951187118678078 9.86730679872635 9.2195598533976e-07 0.0140727361602261 10.0694235006641 22.0027149038568 0.951187118678078 0.0861203299560378 AT1G15520_at 3.19100614418004 4.02700246211554 7.28717656282864 7.82892503357267 3.46931619549864 3.00462454825861 1.90045477105165 1.71306958783491 1.77555544001398 1.42682392708275 2.00234492435311 1.95222908111093 1.8901074361209 2.25157261298528 1.73603883807895 1.80936546760883 1.87721021216678 1.48710983515660 2.07636603893500 0.310451674487987 0.317401100852346 0.420217854587797 0.376119183632715 0.326268032447938 0.317965687763937 0.3046675990813 0.308489969131713 0.311813663888065 0.305452146200248 0.3046675990813 0.306061856517786 0.31060143021966 0.3046675990813 0.3046675990813 0.3046675990813 0.312076954791263 0.310758194098834 0.3046675990813 1 0|1 /|- 5332020 5332558 5332325.1 5331853 5338170 - gene protein_coding_gene FALSE TRUE AT1G15520.1 ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. Identical to Pleiotropic drug resistance protein 12 (PDR12) [Arabidopsis Thaliana] (GB:Q9M9E1); similar to ATPDR11/PDR11 (PLEIOTROPIC DRUG RESISTANCE 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G66950.1); similar to ATPDR6/PDR6 (PLEIOTROPIC DRUG RESISTANCE 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT2G36380.1); similar to ATPDR7/PDR7 (PLEIOTROPIC DRUG RESISTANCE 7), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G15210.1); similar to pleiotropic drug resistance like protein [Nicotiana tabacum] (GB:BAB92011.1); similar to Pleiotropic drug resistance protein 1 (NpPDR1) (GB:Q949G3); similar to Pleiotropic drug resistance protein 1 (NtPDR1) (GB:Q76CU2); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain Plant PDR ABC transporter associated; (InterPro:IPR013581); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 1.40289642134060 9.85728572472803 9.31248873127676e-07 0.0142136515505477 10.0633102653599 5.87036146464671 1.40289642134060 0.192972074061646 AT2G24120_at 4.81835714145778 5.00940927046255 4.42437764974734 4.41708171295765 4.06502004947114 4.22459408760310 4.55741148613281 4.76295368132266 3.50805467484939 4.22145776328455 2.4927356482269 2.80084498712429 3.130621564522 2.51808987641621 2.96680551618474 2.98444212114085 3.25185536356559 2.62254832874848 4.4753694759798 0.266776582327812 0.261780634389626 0.251899020333488 0.267874284124869 0.254647047603493 0.255201650382512 0.270516503542908 0.266788134641256 0.2565476413904 0.264276007987591 0.255478568442379 0.251210146147727 0.261741493848847 0.262104807491548 0.256689864973139 0.252452656725483 0.260217570467802 0.259452153598913 0.252085348269521 2 2|0 -|/ 10256504 10257761 10257179.1 10255995 10261721 - gene protein_coding_gene FALSE TRUE AT2G24120.1|AT2G24120.2 PDE319/SCA3 (PIGMENT DEFECTIVE 319, SCABRA 3); DNA binding / DNA-directed RNA polymerase Identical to DNA-directed RNA polymerase 3, chloroplast precursor (EC 2.7.7.6) (RPOT3) [Arabidopsis Thaliana] (GB:O24600); similar to DNA-directed RNA polymerase, mitochondrial (RPOMT) [Arabidopsis thaliana] (TAIR:AT1G68990.1); similar to DNA-directed RNA polymerase (RPOT2) [Arabidopsis thaliana] (TAIR:AT5G15700.1); similar to DNA-dependent RNA polymerase [Spinacia oleracea] (GB:CAC80139.1); similar to DNA-directed RNA polymerase 3B, chloroplast precursor (T7 bacteriophage-type single subunit RNA polymerase 3B) (NictaRpoT3-tom) (GB:Q8L6J1); similar to DNA-directed RNA polymerase 3, chloroplast precursor (T7 bacteriophage-type single subunit RNA polymerase 3) (NsRpoT-C) (GB:P69242); contains InterPro domain DNA-directed RNA polymerase, bacteriophage type; (InterPro:IPR002092) -0.863282782764628 -9.82910925777326 9.57925616361962e-07 0.0146198607569163 10.0460686956383 7.99204408345056 -0.863282782764628 0.055879673669914 AT1G19510_at 6.83492717206029 7.35361670231161 5.13061725016819 5.68296934216138 5.69667181961052 5.7021171344046 6.13611709699709 6.84393413534228 5.05318069250093 5.20775711294152 3.05072059967355 3.27796642565232 4.72408559421587 4.29549825555177 2.58089120628976 5.12705566844868 4.41053502639988 2.77422917478281 5.35165056255935 0.310190439889066 0.317740354972055 0.3118480410197 0.311958264591196 0.310449781507892 0.31223089620003 0.315250874920327 0.312401100910512 0.319764013307781 0.310190439889066 0.318354676568916 0.325011012469684 0.310190439889066 0.313378502934111 0.334244514327731 0.310190439889066 0.316538544866199 0.337524390452862 0.310823191048053 1 1 - 6757045 6757257 6757145.091 6756277 6757368 - gene protein_coding_gene FALSE TRUE AT1G19510.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G75250.2); similar to myb-like protein RL3 [Antirrhinum majus] (GB:ABI14752.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.33156413444104 -9.8156921505218 9.70918350705564e-07 0.0148171849501176 10.0378310914973 10.6647807649040 -1.33156413444104 0.179440770069075 AT3G03920_at 7.38949818484754 7.91106773621692 6.24665945334598 6.91712218865396 6.40462610151714 6.18843030764205 6.92263645935708 7.51439094011905 7.34800173050568 6.25184260001476 4.7165712799394 5.34549660929459 4.76292268419195 5.12338787541937 5.50986346196843 4.98683256125403 5.0543480999734 4.46627190629774 6.4901585266477 0.228914804303271 0.232312534043581 0.238026257942527 0.234830171073163 0.227996699261257 0.236842284484327 0.239791478613986 0.226552808255849 0.235657818988142 0.221849621590120 0.223716721082384 0.221660966332429 0.230016355347984 0.225200812931745 0.236291269308237 0.228044445107660 0.238625009558032 0.235943929873409 0.230267128312257 3 3|0 -|/ 1009148 1010216 1009573 1009002 1010487 - gene protein_coding_gene FALSE TRUE AT3G03920.1 Gar1 RNA-binding region family protein Identical to Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Arabidopsis Thaliana] (GB:Q8VZT0;GB:Q8LG22;GB:Q9S715); similar to Gar1 RNA-binding region family protein [Arabidopsis thaliana] (TAIR:AT5G18180.1); similar to Os11g0579800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068150.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_796892.2); contains InterPro domain Gar1 protein RNA-binding region; (InterPro:IPR007504) -1.34807231330453 -9.81111626694427 9.75393026591958e-07 0.0148844975857933 10.0350176024778 12.7829936358867 -1.34807231330453 0.183018628279378 AT1G35230_at 7.43821518499363 7.84486640768068 9.13692816610227 9.33382534905663 6.37190180997066 6.89906602214015 1.59202232701378 2.22036285031945 4.83964184191258 3.08181143961293 2.94840387566044 3.63600528127352 2.13547637560503 2.89757216780799 3.07814251912333 2.61733862306654 2.65484250113570 2.51100912861524 2.50051852753572 0.291061057560808 0.291878180288543 0.291478012168406 0.287006606325364 0.297838386995622 0.297766820323807 0.293497191659566 0.287006606325364 0.292882316697343 0.287006606325364 0.296926432682546 0.287006606325364 0.287006606325364 0.287006606325364 0.287471798529747 0.287006606325364 0.292429686445974 0.287184760511094 0.28864388551441 1 1 + 12917360 12917492 12917430.727 12917127 12917741 + gene protein_coding_gene FALSE TRUE AT1G35230.1 AGP5 (ARABINOGALACTAN-PROTEIN 5) Encodes arabinogalactan-protein (AGP5). Identical to Classical arabinogalactan protein 5 precursor (AGP5) [Arabidopsis Thaliana] (GB:Q8LCE4;GB:Q9ZT15); similar to AGP10 (Arabinogalactan protein 10) [Arabidopsis thaliana] (TAIR:AT4G09030.1); similar to putative arabinogalactan-protein precursor [Nicotiana glauca] (GB:CAH69225.1); contains domain PRICHEXTENSN (PR01217) 1.24871092516555 9.80492489543602 9.81483033584345e-07 0.0149764496094635 10.0312075306004 9.49656822068785 1.24871092516555 0.162048634594297 AT2G40360_at 7.51477125417461 7.36884988720446 6.75545243370504 6.60919545037157 6.30266380344177 5.89184106212274 6.71150066557639 7.04879037086147 4.99793960704266 6.25267358045346 4.36832186776501 5.32649752356877 4.59792662213885 4.30270145425981 5.1037936162944 5.11891017663429 5.03110866618614 4.39484374423938 6.70312204152938 0.273861778947771 0.270911879544364 0.276266380615003 0.274288767443048 0.276383526388894 0.275597805411825 0.275473091833825 0.273655669575227 0.294957661353264 0.285249478309453 0.278276545645696 0.271650474573403 0.279634291366975 0.284401097314861 0.279981235576587 0.272553223302828 0.287296931471354 0.280254530457610 0.281433797979692 2 2 - 16860220 16860808 16860536.909 16859958 16863768 - gene protein_coding_gene FALSE TRUE AT2G40360.1 transducin family protein / WD-40 repeat family protein similar to GTP binding / RNA binding [Arabidopsis thaliana] (TAIR:AT5G55660.1); similar to putative WD-40 repeat protein [Trifolium pratense] (GB:BAE71307.1); similar to WD40 [Cucumis melo] (GB:AAU04772.1); similar to putative transducin / WD-40 repeat protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84089.1); contains InterPro domain BOP1, N-terminal; (InterPro:IPR012953); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.987627653916643 -9.80470647502136 9.81698628343932e-07 0.0149787576712717 10.0310730488403 12.1579288002128 -0.987627653916643 0.098690302851886 AT4G31290_at 8.21366393223934 8.0620973818363 4.18368700144669 4.20869027110978 7.33127427080904 7.3273368463552 6.8298072340763 6.25175686316408 8.14124862600972 8.00892730424305 8.75817873766432 8.61209374730498 8.15981038041532 7.95593816329032 8.55646622176385 6.96175656687128 6.62810834534579 8.06956686156562 9.03756610796849 0.210938789018383 0.207721294864060 0.227633029345365 0.214814278049264 0.211268131414584 0.218741188518355 0.206860591144536 0.215760656030068 0.228583673089894 0.212846458175943 0.206210509364303 0.206423330076927 0.211141697246533 0.219537646329571 0.208170414091174 0.208595676029291 0.206680969347539 0.212702900682933 0.209633540252590 4 0|4 /|+ 15187096 15188244 15187750.375 15185964 15188490 + gene protein_coding_gene FALSE TRUE AT4G31290.1 ChaC-like family protein similar to ChaC-like family protein [Arabidopsis thaliana] (TAIR:AT5G26220.1); similar to ChaC-like family protein-like [Solanum tuberosum] (GB:ABB87104.1); similar to meloidogyne-induced (GB:ABA46779.1); contains InterPro domain ChaC-like protein; (InterPro:IPR006840) -1.00487919505578 -9.80443796749043 9.81963732504837e-07 0.0149818206668263 10.0309077218971 14.7303661705136 -1.00487919505578 0.103508581432153 AT4G11360_at 8.84768763493261 9.10184919397445 9.49205698208312 9.5240643402412 10.0607862437364 10.1191817959484 7.34266188581231 7.99551011254986 7.22594077345545 7.05030167302646 7.3695764231348 7.44823707608635 8.00040266052542 8.24190004002195 6.77243920379124 8.64290500209082 8.3026213724228 7.83464989869112 7.19464206801431 0.205431998129938 0.196203760873788 0.213245192643298 0.205321841648479 0.212062777634249 0.214432786767233 0.201293689624472 0.202906786177616 0.207322433712062 0.213881067227356 0.198435967876050 0.197376390317117 0.197025930014249 0.198348571866172 0.196234844585304 0.196565918679355 0.212957743401914 0.198637835291227 0.203703992459993 4 4 + 6906083 6906471 6906279.182 6906009 6906754 + gene protein_coding_gene FALSE TRUE AT4G11360.1 RHA1B (RING-H2 finger A1B); protein binding / zinc ion binding Encodes a putative RING-H2 finger protein RHA1b. Identical to RING-H2 zinc finger protein RHA1b (RHA1B) [Arabidopsis Thaliana] (GB:Q9SUS5;GB:Q9ZT51); similar to RHA1A (RING-H2 finger A1A), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G11370.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABD28706.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.07336254422424 9.79095565391021 9.95375315276593e-07 0.0151854458098597 10.0225971292412 16.5522512558736 1.07336254422424 0.121784681197370 AT4G37540_at 4.94517366061162 5.47309970944239 5.13253965874498 5.58378782038808 5.59033629262104 5.37959877351518 7.3126163082001 7.49849811960887 6.87361122096491 6.67964061607772 5.78192925432842 5.15463485805322 4.15012926546675 5.30584759718121 5.272769268625 3.84316925813203 5.67446876264165 5.83406400558601 5.80231018513448 0.242066189273739 0.225538971413548 0.234360961192192 0.231471796461691 0.234786876094666 0.237954692899171 0.235891796569741 0.226164472732472 0.233975525947619 0.226406320776918 0.232637022577772 0.227995462562302 0.228746239559843 0.228937393515894 0.225260682734705 0.229956096953950 0.248914036983637 0.225260682734705 0.228366669326971 4 4 - 17639721 17640149 17639936.727 17639527 17640651 - gene protein_coding_gene FALSE TRUE AT4G37540.1 LOB domain protein 39 / lateral organ boundaries domain protein 39 (LBD39) Identical to LOB domain-containing protein 39 (LBD39) [Arabidopsis Thaliana] (GB:Q9SZE8;GB:Q8LBC9); similar to LOB domain protein 38 / lateral organ boundaries domain protein 38 (LBD38) [Arabidopsis thaliana] (TAIR:AT3G49940.1); similar to lateral organ boundaries domain protein [Caragana korshinskii] (GB:ABG90382.1); contains InterPro domain Lateral organ boundaries, LOB; (InterPro:IPR004883) -1.10525439339450 -9.79004807311269 9.96285230923564e-07 0.0151983311977390 10.0220370422677 11.6539465634636 -1.10525439339450 0.129651690951885 AT4G30650_at 10.3675132370462 10.4419006542763 6.67337959417415 6.39820532614132 8.82848408282576 8.22138468710336 8.0510420468964 7.71281507820731 3.97418675925520 5.75382540589798 8.91036944203202 9.80091100882666 8.63151598425598 8.98837238366119 8.94230177251445 8.77053184406702 7.36711363426033 8.22430242072777 4.908785659216 0.212769358170808 0.221517068712483 0.218299697954138 0.229540817840865 0.205763450665043 0.205763450665043 0.208340122010032 0.208262436198702 0.236267369483455 0.213067584741627 0.205763450665043 0.211909084387659 0.210237634051358 0.218003284901879 0.208677409887034 0.207736906248908 0.226120163900965 0.205814257004884 0.223493234456007 4 4|0 +|/ 14954412 14954678 14954553.2 14954326 14954974 + gene protein_coding_gene FALSE TRUE AT4G30650.1 hydrophobic protein, putative / low temperature and salt responsive protein, putative Identical to UPF057 membrane protein At4g30650 [Arabidopsis Thaliana] (GB:Q9M095;GB:Q6IDS0); similar to hydrophobic protein, putative / low temperature and salt responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G30660.1); similar to salt and low temperature response protein [Brassica rapa subsp. pekinensis] (GB:AAT11798.1); contains InterPro domain Protein of unknown function UPF0057; (InterPro:IPR000612) 1.10627018581236 9.78667616924512 9.99673704464193e-07 0.0152490226878968 10.0199554537954 15.1285205480420 1.10627018581236 0.129989457996478 AT3G23805_at 4.91438117947249 5.05232201068278 3.55043905576895 3.97780335419874 3.39319292438337 3.65953693722163 6.37982040141409 7.25320990042604 7.37938444277683 6.64771980445367 7.71291225665607 7.36299483830896 7.14321780563331 7.29273793845678 6.72716320611142 6.17790408140706 4.81895936222066 6.53037094650476 7.23676465556476 0.228083824540396 0.223848516728607 0.226887036936409 0.226601434690816 0.229751332367879 0.230218940642252 0.228182700092383 0.230203097838067 0.222998536982446 0.228757059356575 0.223523247285752 0.222998536982446 0.222998536982446 0.226155216070005 0.234780938110574 0.222998536982446 0.244174436880064 0.222998536982446 0.228325283895158 3 3 + 8586491 8586805 8586647.545 8586389 8587063 + gene protein_coding_gene FALSE TRUE AT3G23805.1 RALFL24 (RALF-LIKE 24) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. similar to RALFL31 (RALF-LIKE 31) [Arabidopsis thaliana] (TAIR:AT4G13950.1); similar to rapid alkalinization factor 1 [Solanum chacoense] (GB:AAR00325.2); contains InterPro domain Rapid ALkalinization Factor; (InterPro:IPR008801) -1.31093202581252 -9.78059129916963 1.00582008719369e-06 0.0153417737899654 10.0161962019705 11.6769576481181 -1.31093202581252 0.176092475900706 AT3G63380_at 4.9800275938383 4.74408259800989 7.38415573448158 6.51185114489959 3.73444462982652 3.79865369427756 0.560570683469723 0.688300654170512 0.384589691873628 0.655217188375657 0.846446078957953 0.331979663177669 0.72390924312226 0.429145069629731 -0.324290164937918 0.550896615664779 0.678780637639159 0.629110085793713 0.884727768819526 0.394007456930274 0.401418239096174 0.390394579094441 0.405243213043396 0.385209123330505 0.376083996690434 0.356656653674897 0.352762097990810 0.357032863998487 0.352762097990810 0.358541520529348 0.352762097990810 0.352762097990810 0.352762097990810 0.36721599719699 0.352762097990810 0.355167795749218 0.358279384880397 0.352762097990810 3 3 - 23418089 23418622 23418348.364 23417586 23421335 - gene protein_coding_gene FALSE TRUE AT3G63380.1 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) Identical to Putative calcium-transporting ATPase 12, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12) (ACA12) [Arabidopsis Thaliana] (GB:Q9LY77); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) [Arabidopsis thaliana] (TAIR:AT3G22910.1); similar to ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G57110.2); similar to type IIB calcium ATPase [Medicago truncatula] (GB:AAL17950.1); similar to Putative calcium-transporting ATPase [Oryza sativa] (GB:AAM08790.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain ATPase, P-type cation-transporter, C-terminal; (InterPro:IPR006068); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) 1.22788326122026 9.77439810276723 1.01211792035084e-06 0.0154368225211911 10.0123662442402 4.61264019328197 1.22788326122026 0.158325922295070 AT4G23450_at 4.04688702053923 3.93354699560238 5.09952958157203 4.94158798618976 4.99568549482176 4.64167228939385 2.2877645886234 2.65156221829493 2.16925448170157 1.70038956602176 2.0724938646524 1.67802298891128 3.05001620211417 1.81810347452677 1.56835302693224 2.38424285298105 2.61601561190638 2.18900217223414 1.90814552985248 0.251179875555913 0.251708876309266 0.25811674298 0.263656261865995 0.248770585188089 0.267185624675443 0.263915376765153 0.265825033319657 0.255954517373321 0.248933071040051 0.247395662313789 0.256178375433335 0.247395662313789 0.250476314214611 0.247592815667214 0.248261351060164 0.256223702147144 0.248956725088212 0.249093283991697 4 0|4 /|- 12241261 12241695 12241486.6 12240813 12242716 - gene protein_coding_gene FALSE TRUE AT4G23450.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G41350.1); similar to Os10g0142100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064147.1); similar to Os11g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067717.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65911.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.967890023659865 9.76774542713827 1.01893058163787e-06 0.0155397103005592 10.0082478835071 6.12376008861678 0.967890023659865 0.0940668824896903 AT4G18570_at 6.39834741868726 6.50993766913069 4.76026042985551 5.00393679108214 5.99102916634564 5.95425537993743 7.87520605774272 7.70196112568313 7.74031735638947 7.2634528163987 8.18764371349827 8.10770987901918 7.91067532274235 7.64116548305427 7.52767687661721 7.3793485843201 6.88835958695704 7.53529528242597 7.9985363522039 0.231706852152679 0.232307066083931 0.23975561629108 0.247080679912156 0.235443113018645 0.246417998566774 0.237098286871881 0.237728146841415 0.243522952212699 0.233375543472052 0.228160315917644 0.233485036590943 0.230994834039259 0.232478546583015 0.231707274132593 0.231682157961051 0.25772271529299 0.232977852229144 0.232510843198816 4 4|0 +|/ 10233091 10234289 10233529.5 10231229 10234704 + gene protein_coding_gene FALSE TRUE AT4G18570.1 proline-rich family protein similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) [Arabidopsis thaliana] (TAIR:AT3G25690.1); similar to pherophorin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68701.1); similar to Os05g0573900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056385.1); contains domain TPR-like (SSF48452); contains domain FORMIN-LIKE 1 (PTHR23213:SF27); contains domain FORMIN-RELATED (PTHR23213) -0.857096896628583 -9.76613065381734 1.02059166328888e-06 0.0155640228651554 10.0072475875473 13.9317016795131 -0.857096896628583 0.0555924931925767 AT3G19680_at 4.46614203346458 4.87952416822695 3.9226803399354 4.10604160564031 4.04417378237571 3.87931956672482 6.00953312952657 6.10672017476831 8.20322716006323 5.77476302675573 8.05762472591819 6.96657158171971 6.49566704513526 7.92491971593063 5.93057779025254 6.28488803904744 5.07443775365607 5.72079247994783 7.18386400829794 0.228326034408317 0.232432272915776 0.244074244879109 0.228795804610345 0.227167628456213 0.233758019093378 0.224515448174418 0.228284871315043 0.249299676598103 0.222769540746413 0.229463671790392 0.225295476563084 0.225318747987611 0.227006047065947 0.225141860396985 0.222769540746413 0.241887029994873 0.229092993358884 0.231280784179347 3 3 + 6841529 6842044 6841761.909 6840287 6842326 + gene protein_coding_gene FALSE TRUE AT3G19680.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50040.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93135.1); contains InterPro domain Protein of unknown function DUF1005; (InterPro:IPR010410) -0.93722127987444 -9.7602295020304 1.02668702232234e-06 0.0156559504033934 10.003589817166 11.4822099949945 -0.93722127987444 0.0849781886652017 AT2G20020_at 5.26086243423659 4.84810915178623 4.5267406990626 3.90306540753862 4.03611587990427 3.56836831241634 6.4269265523919 6.08524119905654 3.70056857645896 4.6933116893262 3.03400935097817 3.56294955578352 2.90872066131825 2.77642928009093 3.70183448815894 4.065502334767 3.65703859192627 3.17844390416308 4.25026751132091 0.222008674683173 0.223424143736732 0.234476410989152 0.232197597671787 0.220341726913777 0.235395688023386 0.225868796464566 0.222806426360447 0.223613384850117 0.225859294103322 0.228329593424384 0.222630769340638 0.224159899754272 0.225644497283010 0.22124798716037 0.219156201989284 0.220132280035319 0.222530828338228 0.219790988967302 2 2 + 8653577 8653940 8653764.091 8651467 8654272 + gene protein_coding_gene FALSE TRUE AT2G20020.1 similar to ATCAF2/CAF2 (ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2) [Arabidopsis thaliana] (TAIR:AT1G23400.1); similar to Protein of unknown function UPF0044 [Medicago truncatula] (GB:ABE81273.1); contains InterPro domain CRS1/YhbY; (InterPro:IPR001890) -1.25040608222056 -9.75871883828642 1.02825372918845e-06 0.0156788128626655 10.0026528885413 8.61959467784928 -1.25040608222056 0.163705761387231 AT2G35980_at 3.00198561745816 3.08515150225224 5.28343986396581 5.5383269478797 2.42743040971273 2.73424364633522 0.912670341752672 0.546966705389504 1.22881485079080 0.919769550253211 0.72931304412557 0.496329540170829 0.561044870065238 0.533643335784972 0.491026613406329 0.653479625048982 0.662537909925391 1.32400544215554 0.418478779659003 0.286407463125919 0.276046733899917 0.286766361351796 0.306641700971259 0.273331751188500 0.263006306144318 0.273361058391055 0.269670786683044 0.263006306144318 0.263006306144318 0.268908037230111 0.264597155290660 0.263719847738091 0.263803093715737 0.264757748724277 0.265402771111536 0.263006306144318 0.268879533084036 0.264694399821828 2 2 + 15117821 15118364 15118032.091 15117667 15118550 + gene protein_coding_gene FALSE TRUE AT2G35980.1 YLS9 (YELLOW-LEAF-SPECIFIC GENE 9) Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast. similar to NHL2 (NDR1/HIN1-like 2) [Arabidopsis thaliana] (TAIR:AT3G11650.1); similar to harpin inducing protein [Nicotiana tabacum] (GB:AAF62403.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.967450747972286 9.73990538904261 1.04798342721339e-06 0.0159786033147226 9.99096549203822 3.70983201658643 0.967450747972286 0.0947476262646637 AT2G32680_at 9.54554099323172 9.73404948288625 10.6990111002227 10.7321807221363 9.53404015795769 9.6412161461428 3.66927626403199 4.0632098656431 8.69588979811246 5.61538979539319 4.85296980464116 6.10328247183488 5.56561292932417 5.57095435681618 5.0856681806262 6.10624166376689 4.88665726010372 5.13272955296403 6.64280205057622 0.311121040850425 0.311528590122055 0.312635040014757 0.315028612038482 0.308487695579452 0.309529813561330 0.311683452802146 0.320555912974564 0.306485184898898 0.309386529224645 0.317922506215675 0.306485184898898 0.306485184898898 0.306485184898898 0.311847450628419 0.306485184898898 0.329201213679266 0.306485184898898 0.306485184898898 2 2 - 13867133 13867592 13867356.636 13866846 13869691 - gene protein_coding_gene FALSE TRUE AT2G32680.1 disease resistance family protein similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT3G24900.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33020.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G25020.1); similar to putative kinase [Brassica napus] (GB:ABI99471.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.913456763157813 9.7350946053904 1.05309403256688e-06 0.0160554716205146 9.98797122184217 14.6511697959667 0.913456763157813 0.0780294343539933 AT2G39210_at 9.40879964504122 9.9337866253554 10.0358016802649 10.1229518136578 8.57820484953506 8.48944799592478 4.58933211553683 4.83745881459836 8.22846093212586 5.67033395560734 6.17372134567656 7.98425479183998 4.14305338695109 6.98321082067861 6.34518110785787 6.32662343124029 5.82882648382215 6.54397596136842 5.34778882566774 0.250107217659135 0.257965109095217 0.262026005778763 0.255193339853469 0.247833071101076 0.258688238830177 0.252447598003548 0.250609420595735 0.245911869569627 0.246617055810269 0.249054857690475 0.245911869569627 0.250290621752397 0.248172284266745 0.248408113690605 0.245911869569627 0.253044020964334 0.249104371151254 0.256636905747841 2 2 - 16373550 16373909 16373745.091 16373235 16375353 - gene protein_coding_gene FALSE TRUE AT2G39210.1 nodulin family protein similar to nodulin family protein [Arabidopsis thaliana] (TAIR:AT2G28120.1); similar to putative nodule-specific protein [Oryza sativa (japonica cultivar-group)] (GB:AAO37543.1); similar to nitrate and chloride transporter [Glycine max] (GB:AAW51884.1); similar to putative nodule-specific protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83908.1); contains InterPro domain Nodulin-like; (InterPro:IPR010658) 0.994917648212538 9.7333130282686 1.05499348198915e-06 0.0160833756329246 9.9868617652969 14.6027898528125 0.994917648212538 0.102767534501511 AT2G36390_at 8.78947318537192 8.47339105083198 8.84985329298929 8.63064536842475 9.36475932917712 8.90585149094661 7.93226288755907 7.38477613430288 5.5442861538964 7.04856478056968 8.20294500903313 7.91305655988122 7.99522660825367 7.66137491308322 7.87403660263048 7.45481266720587 8.54056859856065 7.6803374263039 6.66944173897234 0.175225597890414 0.177592776862543 0.183221473982008 0.176423463320687 0.175481537740891 0.178259508348432 0.180646138267923 0.178596691315025 0.196720396850614 0.187721635447605 0.178049140639908 0.175225597890414 0.183539746063699 0.181986413791680 0.188590512041214 0.175225597890414 0.176997457747035 0.191130609440436 0.182205922785463 2 2 + 15276382 15276993 15276698.182 15271316 15277171 + gene protein_coding_gene FALSE TRUE AT2G36390.1 SBE2.1 (STARCH BRANCHING ENZYME 2.1); 1,4-alpha-glucan branching enzyme Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues. similar to SBE2.2 (STARCH BRANCHING ENZYME 2.2) [Arabidopsis thaliana] (TAIR:AT5G03650.1); similar to starch branching enzyme I [Pisum sativum] (GB:CAA56319.1); similar to starch branching enzyme class II (GB:AAB03099.1); similar to starch branching enzyme II [Solanum tuberosum] (GB:CAB40743.1); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193) 1.14366606475376 9.73081565014767 1.05766233616936e-06 0.0161230046525658 9.98530601602951 15.7094061037497 1.14366606475376 0.140408899308204 AT3G15450_at 11.9909051022215 12.1470004010235 10.9613001138800 11.0640023424170 12.7827340267257 12.2851600199329 8.92593314939856 9.01888958897294 10.2871642112142 9.58594627569068 10.7915660657749 11.1444495172049 10.8482667486109 10.6961896507726 10.8127192157219 10.5976547170140 10.7865752294385 10.6664547329746 10.5005264663419 0.121785281274491 0.119361839497251 0.121762449149387 0.123836225860271 0.127310057817180 0.124408241404722 0.12483167299178 0.124063346667825 0.135537233237309 0.129115080632808 0.119653070895514 0.119069197947297 0.119069197947297 0.131142883254920 0.121417227205087 0.119069197947297 0.126533078596736 0.119069197947297 0.122760449800160 3 3|0 +|/ 5213223 5213973 5213557.7 5213004 5214131 + gene protein_coding_gene FALSE TRUE AT3G15450.1|AT3G15450.2|AT3G15450.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27450.1); similar to unknown [Glycine max] (GB:AAG00940.1); contains domain ASPARAGINE SYNTHETASE (PTHR11772); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27450.1); similar to unknown [Glycine max] (GB:AAG00940.1); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.96052794947078 9.71707219580289 1.07248081927665e-06 0.0163478251282339 9.97673328345211 21.6057556609572 0.96052794947078 0.093374863933551 AT4G21650_at 4.12599652251762 4.05524557552855 3.90070471102034 4.16334032358977 4.12417618632453 3.94573552904096 4.21891492220643 4.40445073776280 4.29024963029706 4.76290365137773 6.71428518253152 6.60032074290942 6.15794671899292 6.42965301607022 6.57846316183666 7.33851825869853 5.27396372432628 6.88236291397225 4.68996282169909 0.197531366283608 0.196821293158569 0.196874443569733 0.198352053313876 0.199360685737327 0.196275926244786 0.201103310464197 0.198208013103707 0.195301155590924 0.196709014398727 0.204876191944365 0.196070345322492 0.200897489673537 0.209688724085538 0.207376251469633 0.20289097564004 0.201100353134446 0.217322302593473 0.194906281253783 4 4 - 11501403 11501845 11501690.364 11501210 11504690 - gene protein_coding_gene FALSE TRUE AT4G21650.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G21640.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G32960.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G21630.1); similar to Os09g0530800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063751.1); similar to Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE90461.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.874118880891326 9.70638240049965 1.08416214158220e-06 0.0165247993619958 9.9700521931 9.6563095215198 0.874118880891326 0.0648083982535354 AT1G52000_at 8.03551271772859 8.51310798953228 6.9815887733168 7.48799837950518 9.05467402201025 8.1982640237681 5.085613398141 5.53087874385572 1.66573938316615 5.12908907221088 4.06880310819241 5.1308822020018 6.91670563113554 4.64886018406301 4.04236631367078 6.23906567052769 5.63257808997423 4.95876268465291 3.57839868364105 0.262265653659099 0.261468298497262 0.254611706468806 0.256978748813629 0.263498557346441 0.292743415958236 0.262952830182389 0.259664363983072 0.291169912583410 0.260104158976649 0.26410313384818 0.257587573735293 0.254611706468806 0.262342624566317 0.260746633507246 0.254611706468806 0.262123554561226 0.260524826782169 0.261244681191344 1 1 - 19337026 19337542 19337265.727 19336828 19339784 - gene protein_coding_gene FALSE TRUE AT1G52000.1 jacalin lectin family protein similar to MBP1 (MYROSINASE-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G52040.1); similar to myrosinase-binding protein [Brassica napus] (GB:AAC08048.1); contains InterPro domain Jacalin-related lectin; (InterPro:IPR001229) 1.44318184659515 9.69523575267917 1.09648950983660e-06 0.0167115966194196 9.96307330595555 11.6922024385822 1.44318184659515 0.205945756219402 AT3G29180_at 7.04981502514223 7.0022497261313 7.9956467651613 7.94436505101363 8.3564458015524 8.47897050292697 6.96407133906253 6.75909907323634 7.01772430910833 6.77712857762777 7.16126223019097 6.94958846704158 6.44409374884169 7.1418345846764 7.06962573431285 7.25215875701676 7.49840409414318 7.12443123706782 6.24592184587735 0.172217423141501 0.172217423141501 0.180002880959385 0.173672414116947 0.180560491186629 0.181343107754542 0.176757222956200 0.172217423141501 0.185795921272804 0.172217423141501 0.175141695487171 0.183116122775556 0.180820254032609 0.175536048556056 0.178209653713714 0.172217423141501 0.179923291216433 0.175263675517873 0.183161485342971 3 0|3 /|+ 11151734 11152513 11152201.333 11149452 11152797 + gene protein_coding_gene FALSE TRUE AT3G29180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39430.1); similar to Os12g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067115.1); similar to Os03g0759000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051338.1); similar to Protein of unknown function DUF1336 [Medicago truncatula] (GB:ABE78635.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769) 0.8249824258637 9.69042423171168 1.10185749846937e-06 0.0167923082766732 9.96005694995015 14.4490494609613 0.8249824258637 0.043061830151083 AT2G22500_at 8.51917555460628 8.70490213724967 9.36901366727864 9.2081821915925 7.4674932565375 7.35099869579447 6.19450927846974 6.61201904892765 5.8693427385383 4.54609060308771 5.2006223127767 8.27123144564493 4.482252361346 6.77041558373509 6.3371775439304 5.66804146187471 5.72390508938406 6.94933615583061 5.0289669383828 0.222896619002232 0.221328246161494 0.224368368985484 0.228341828142753 0.221223036207528 0.224300778323826 0.227447017299088 0.223534607340979 0.230433593891680 0.225262300319067 0.227286323072778 0.223089091400485 0.233048083239452 0.228613147833016 0.234108832857463 0.223360410646390 0.230375700881105 0.222856962465484 0.229462807185724 2 2 - 9570651 9571167 9570910.455 9570304 9571831 - gene protein_coding_gene FALSE TRUE AT2G22500.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT4G24570.1); similar to putative mitochondrial dicarboxylate carrier protein [Trifolium pratense] (GB:BAE71294.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030) 0.934254882816573 9.6882554889863 1.10428635657781e-06 0.0168282197878892 9.95869659418683 13.5900398142995 0.934254882816573 0.0862233497337802 AT4G23150_at 8.65438451840864 8.67718473416116 9.85174297609667 9.89373100006754 7.50576705092015 7.78547622474741 1.36931692115711 2.04741096649477 5.52625578278869 3.10799341554516 2.69435996702829 2.59749556044613 2.70547915621614 2.84405562501362 2.30511273068816 3.2369569488978 2.73346985539689 2.95201898664158 3.86658640407690 0.224694996657787 0.232138631634147 0.226067315222873 0.228684889989549 0.244140386000029 0.232571273623613 0.241253364343964 0.231966444575952 0.256524860752268 0.224694996657787 0.230218458238727 0.231974741585519 0.234017137974593 0.230011631894726 0.238485231479315 0.226727445578777 0.230413692038378 0.224772361217947 0.230341533339667 4 4 + 12127621 12128287 12128033 12125742 12128343 + gene protein_coding_gene FALSE TRUE AT4G23150.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23160.1); similar to CRK10 (CYSTEINE-RICH RLK10), kinase [Arabidopsis thaliana] (TAIR:AT4G23180.1); similar to CRK6 (CYSTEINE-RICH RLK 6), kinase [Arabidopsis thaliana] (TAIR:AT4G23140.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.08188921544501 9.6710372156284 1.12377664996456e-06 0.0171241085921599 9.94787944810235 10.4359087013040 1.08188921544501 0.127207726716501 AT1G08930_at 10.5709793641350 10.6062737486336 10.4838121923878 10.6925806927461 10.7702111452353 10.4712581100281 7.24202398453783 7.5644421816151 10.3494333155393 9.45648041753512 10.1573289046154 10.0482813466753 9.7241223452541 10.1245225529612 9.75042142252586 9.93532604943697 9.30522210143327 9.78531700821403 9.0238597960103 0.125647005396668 0.123073906023472 0.134830201064486 0.123320674408084 0.122178264329898 0.125958143028240 0.163590094047088 0.134761178110269 0.130247818480054 0.124085282674698 0.125841031684075 0.121310719138520 0.121310719138520 0.125822650408741 0.132481737013575 0.121310719138520 0.139092086965171 0.126645729481886 0.125195027275079 1 1|0 +|/ 2875676 2876952 2876296.5 2873468 2877273 + gene protein_coding_gene FALSE TRUE AT1G08930.1|AT1G08930.2 ERD6 (EARLY RESPONSE TO DEHYDRATION 6); carbohydrate transporter/ sugar porter encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold. Identical to Sugar transporter ERD6 (Early-responsive to dehydration protein 6) (Sugar transporter-like protein 1) (ERD6) [Arabidopsis Thaliana] (GB:O04036;GB:O65799); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT1G08920.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.926214461031782 9.66276342312246 1.13327435676550e-06 0.0172677013740359 9.94267086137544 19.5320687904570 0.926214461031782 0.0844528730289073 AT2G19450_at 6.10092724870078 6.11919809409947 4.29228547876836 4.72944749772697 5.7699118660486 5.59032512025989 1.66740478266757 1.33826983804791 2.26196548726613 1.67194066743915 2.67981274661662 2.70115502871590 2.04377540833799 2.53614133143116 3.13424582789027 2.4067767567751 2.54168558996165 3.23656853078538 2.05355796933726 0.298800168500412 0.299478199710813 0.291998690713654 0.295765868515883 0.295442836916354 0.299904700274636 0.290698618658846 0.290427649819566 0.297006786480203 0.288338914581693 0.285798994437006 0.288948816885848 0.285798994437006 0.288779763479133 0.287797327275690 0.289269898683584 0.292872534624433 0.290484124799464 0.287153649729651 2 2|0 +|/ 8435263 8436485 8436014.222 8433288 8436818 + gene protein_coding_gene FALSE TRUE AT2G19450.1 TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1); diacylglycerol O-acyltransferase Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. similar to diacylglycerol acyltransferase DGAT1 [Brassica juncea] (GB:AAY40784.1); similar to diacylglycerol acyltransferase DGAT2 [Brassica juncea] (GB:AAY40785.1); similar to putative diacylglycerol acyltransferase [Brassica napus] (GB:AAF64065.1); contains InterPro domain Membrane bound O-acyl transferase, MBOAT; (InterPro:IPR004299) 0.976620638852715 9.65985415251195 1.13663460041031e-06 0.0173177647718515 9.94083774152667 6.7788920044125 0.976620638852715 0.0997169843402338 AT3G49260_at 8.25610327399293 8.28939201864577 4.64371280479036 4.37471286521241 6.3753602306192 6.52463669501614 7.22457305038844 7.51664054779552 8.65505366378402 7.93560071582455 9.48882404377867 9.96683257872213 9.03847185504834 9.08419531314404 9.6325215516984 9.00589593160645 6.96249481059694 8.74493729581543 8.71124381451074 0.174234394146238 0.169448389492314 0.187708157580689 0.193733968260232 0.174768704264305 0.183622455801581 0.177245559205402 0.175709772775175 0.176776568384345 0.181961838422027 0.171072474193829 0.173772949381199 0.169069687917114 0.173783272876195 0.175498488630008 0.175357501836883 0.182845138306693 0.169069687917114 0.173692716393873 3 3 + 18276288 18276820 18276562.909 18273415 18277006 + gene protein_coding_gene FALSE TRUE AT3G49260.1|AT3G49260.2 IQD21 (IQ-domain 21); calmodulin binding similar to IQD3 (IQ-domain 3), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G52290.1); similar to IQ calmodulin-binding motif, putative [Medicago truncatula] (GB:ABE77889.1); similar to Os08g0115200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060851.1); similar to Os02g0299200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046615.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.892757982975636 -9.64968254632383 1.14846794983226e-06 0.0174969092156945 9.93442188999052 15.3628853044365 -0.892757982975636 0.0736359274855597 AT4G27435_at 1.02388806166008 1.15778802241749 2.17552069675503 2.10159590029867 2.00463567877589 2.44096081072959 1.48096055871620 1.53877929924589 2.88043436279388 2.18138302054625 3.74702184476760 3.44602352196841 2.62886870146118 2.77938229250614 3.15728977870581 2.77918936298066 5.05995956574947 3.64110557216444 2.31435944153945 0.222186144398600 0.218839862731817 0.216450516311843 0.223654161697984 0.214087037446387 0.215543003584374 0.218117903072057 0.216407657327754 0.228498020640287 0.225324439942269 0.216711046884183 0.215885319015601 0.217108968036271 0.226052505278802 0.215144024551014 0.216126608901886 0.256031995543769 0.220626471758704 0.217327249541227 4 4 + 13723911 13724823 13724292.455 13723800 13725143 + gene protein_coding_gene FALSE TRUE AT4G27435.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52910.1); similar to fiber protein Fb34 [Gossypium barbadense] (GB:AAR07596.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606) 0.913226878937322 9.64968032619482 1.14847054717285e-06 0.0174969092156945 9.93442048847098 4.67230647274043 0.913226878937322 0.0806361762175807 AT1G23840_at 5.9506417211986 6.32708280378025 6.58314791272326 6.64055161042724 6.06347128891385 6.14644966507537 2.4163170413994 2.49994436708366 4.18669982518279 3.15188851384917 2.73549193055754 3.97031916899962 3.04319532225118 3.06765014561016 3.34616473927817 3.02970312498701 3.78839770580525 3.57238094771749 3.52076581401766 0.260841244166733 0.254453920677895 0.251088963824582 0.251123685593841 0.255144759875083 0.252206022901850 0.263449043931121 0.259417220593356 0.253327730145735 0.254993850589854 0.249847174546611 0.252535330365097 0.249609464279678 0.261673760691259 0.250392482554878 0.251015072138549 0.250951272305452 0.258226084557041 0.249928070293397 1 1 - 8424437 8424833 8424670.091 8424286 8425365 - gene protein_coding_gene FALSE TRUE AT1G23840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23830.1) 0.879643401943524 9.64648472520693 1.15221569573399e-06 0.0175517016931159 9.9324026542863 8.79792460299221 0.879643401943524 0.0689796006470464 AT1G55760_at 5.02844942151427 5.07483424870034 6.36493151967773 6.60988743391252 7.06281797833965 5.9708427262412 4.85509779006348 4.95636846049137 2.45510023223114 3.41403202548337 4.26699035161386 3.57977429274256 5.01900279808536 4.52294955389207 3.32495345129638 4.08948715146679 5.20541881568286 5.18589629775167 3.61516135329043 0.230236050141669 0.234107749122327 0.237003911810537 0.241003100322089 0.241111570773993 0.246832972022837 0.235659101615304 0.237910962999126 0.23741379712411 0.236858137563233 0.230662434257866 0.23638490378176 0.233719996607730 0.238086047967962 0.258532332846329 0.230236050141669 0.238157774158415 0.232792033625095 0.238376975861999 1 1 - 20850794 20851358 20851140.545 20850574 20852720 - gene protein_coding_gene FALSE TRUE AT1G55760.1 BTB/POZ domain-containing protein similar to BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G21780.2); similar to BTB/POZ; TRAF-like [Medicago truncatula] (GB:ABE83107.1); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 1.38065515987427 9.64511110176794 1.15382960108601e-06 0.0175751324837422 9.9315349722231 9.52077384373495 1.38065515987427 0.194624621988733 AT4G24290_at 5.52307606662996 5.88703015711025 6.60550709369538 6.38409991260798 7.02656719300531 6.73343668581691 5.93243371416801 5.48569900685699 4.53742010988987 3.64724434586331 4.98032951779598 4.96695874490722 5.19073050609239 5.01906474290803 5.15238906508633 5.21901727109538 5.64180067311594 5.24914229343782 4.03154531568949 0.230153902609276 0.236082381925627 0.229618569561703 0.234870547645317 0.226649461353459 0.232923733968113 0.230173989470374 0.229591131797773 0.238825496977695 0.233407039603411 0.232300497734119 0.224183419288253 0.227284822075159 0.232791474031662 0.233687826648850 0.231196255826575 0.224439356391708 0.226040548119026 0.241954857014747 4 4|0 +|/ 12595504 12596527 12596074.6 12594294 12598038 + gene protein_coding_gene FALSE TRUE AT4G24290.1|AT4G24290.2 similar to NSL1 (NECROTIC SPOTTED LESIONS 1) [Arabidopsis thaliana] (TAIR:AT1G28380.1); similar to Membrane attack complex component/perforin/complement C9 [Medicago truncatula] (GB:ABE79564.1); contains InterPro domain Membrane attack complex component/perforin/complement C9; (InterPro:IPR001862)|similar to NSL1 (NECROTIC SPOTTED LESIONS 1) [Arabidopsis thaliana] (TAIR:AT1G28380.1); similar to Membrane attack complex component/perforin/complement C9 [Medicago truncatula] (GB:ABE83668.1); similar to Os07g0166100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058970.1); similar to Membrane attack complex component/perforin/complement C9 [Medicago truncatula] (GB:ABE79564.1); contains InterPro domain Membrane attack complex component/perforin/complement C9; (InterPro:IPR001862) 1.04285108154038 9.63821811067473 1.16196537849865e-06 0.0176978946799129 9.92717794615457 10.8219807415459 1.04285108154038 0.118258663320279 AFFX-r2-At-Actin-M_s_at 11.0524678116738 11.1952670131522 11.6157491032802 11.9464717380476 11.7717173682639 11.7031848386196 10.997836471142 11.4136443301759 10.9607155386069 10.7610938987014 12.1674768730612 12.1159901106200 12.3385983312046 12.1842701483694 12.1582602557489 12.0345125724036 11.7673435698569 12.0646055720628 10.6114918164026 0.0773929436447995 0.0746568802562051 0.0796186402068918 0.0763297694616789 0.076699964010877 0.0786326932477123 0.0758763874969871 0.0764665202183664 0.0826689935874503 0.0768914440840227 0.0767593616750158 0.0746568802562051 0.0761027429620622 0.0770426918118245 0.0775221530431592 0.0746568802562051 0.0803565376433629 0.0747411303301576 0.076247025920107 NA NA NA NA NA FALSE FALSE 0.960295975056215 9.62711530822004 1.17520081128434e-06 0.0178983083558605 9.92014972600353 22.9028669661625 0.960295975056215 0.0959419108372297 AT1G23020_at 7.14819945660995 7.63042535074082 8.3955549927138 8.25338751287392 9.82933069598336 9.2993190919279 5.9237607955675 5.26120463117294 8.31977597117951 8.47055075445586 8.13854327172455 8.64323784474967 9.36474127457444 8.98545957562716 7.86838645011936 9.66908654591332 9.2394078895675 6.12237374882988 8.49443042116607 0.203203929119269 0.190223303212883 0.206109126346665 0.195215164922385 0.202592052386947 0.217291532022344 0.204486523276477 0.22736242936381 0.206611971883012 0.194586956207882 0.193520487776352 0.193349540693522 0.202144531114397 0.194079076554253 0.190134320665463 0.193529685399069 0.216977820421073 0.207599035430573 0.188032401915593 1 1 - 8150198 8150835 8150530.545 8150075 8153346 - gene protein_coding_gene FALSE TRUE AT1G23020.1 ATFRO3/FRO3 (FERRIC REDUCTION OXIDASE 3); ferric-chelate reductase Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon. similar to FRO1 (FERRIC REDUCTION OXIDASE 1), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01590.1); similar to FRO2 (FERRIC REDUCTION OXIDASE 2), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01580.1); similar to ferric-chelate reductase [Lycopersicon esculentum] (GB:AAP46144.1); similar to iron reductase [Pisum sativum] (GB:AAU94355.1); similar to ferric-chelate reductase [Pisum sativum] (GB:AAK95654.2); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916) 1.26457635386152 9.62160693215364 1.18182771007918e-06 0.0179980541967958 9.9166581771093 16.1837262946515 1.26457635386152 0.170671417160862 AT3G02110_at 5.4868964864756 5.26390464049294 2.29844666687147 2.93572477967089 2.91675267436979 3.50996445969692 5.67626075034245 5.82686216100724 6.38969258840327 6.14461636472762 6.84590299749367 7.78867305723477 6.56670952907038 6.78490548685914 7.6816706859141 6.87910994464195 5.03208436427593 6.33326112751661 6.9704063742832 0.281786998128456 0.280725254704713 0.324185159031093 0.309208019588655 0.305312380989196 0.311732794628652 0.28674962041436 0.28346191487879 0.294293916897186 0.280725254704713 0.287407149651260 0.290916022217822 0.286928184284257 0.281400054373652 0.282776208175806 0.281242596230918 0.291745689268504 0.283966130809683 0.280725254704713 3 3 - 370912 371873 371406 370769 373729 - gene protein_coding_gene FALSE TRUE AT3G02110.1 SCPL25 (serine carboxypeptidase-like 25); serine carboxypeptidase similar to BRS1 (BRI1 SUPPRESSOR 1) [Arabidopsis thaliana] (TAIR:AT4G30610.1); similar to unnamed protein product [Oryza sativa (japonica cultivar-group)] (GB:BAB08188.1); similar to Os02g0794500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048377.1); similar to Os01g0158200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042076.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) -1.20539549555308 -9.6175313373291 1.18675691574620e-06 0.0180719343129832 9.91407281560464 10.8596572898312 -1.20539549555308 0.157701114000534 AT1G21830_at 5.53476106328004 5.94320634963236 5.58482485225306 5.76226696179528 6.27566665624809 6.28113367769315 3.92214808368029 3.91134014954798 5.26088146226433 4.09389487504894 5.57687309279171 6.31704908208515 5.30692167400572 5.06143823370156 6.0065952310312 6.2319694244134 5.53291448429368 4.35197401065012 5.33811071607824 0.182984777200193 0.185204795861224 0.186231187620702 0.187891191403303 0.193273222584185 0.190025162958511 0.197022853333248 0.200252128441501 0.187110520742577 0.188479282091099 0.184615628071415 0.184065477410491 0.187177588884651 0.183040824870367 0.194019518605874 0.182843949513663 0.192918861719782 0.184260076443454 0.187045483928577 1 1 - 7661446 7662468 7661962.85 7661107 7662597 - gene protein_coding_gene FALSE TRUE AT1G21830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G44608.1); similar to Os04g0690500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054352.1); similar to CAA30371.1 protein [Oryza sativa] (GB:CAB53474.1); similar to H0814G11.20 [Oryza sativa (indica cultivar-group)] (GB:CAJ86353.1) 0.899348505893313 9.61390977482679 1.19115566587925e-06 0.0181377273243434 9.9117740435056 10.6248414352257 0.899348505893313 0.0770938529484848 AT2G36460_at 9.39280839747136 9.39619900181195 9.48204437673869 9.66039046271124 9.94029834404734 9.70632295113211 8.41598311965747 8.76968370603955 8.06086644040265 8.79869987604631 9.56485407067042 9.51862499514855 9.67451348070573 9.5791432155127 9.51341355117684 9.48239599652968 9.56834135061799 9.62442876870693 8.5089410215393 0.114009478233680 0.116306303469024 0.119590328689677 0.121150192782757 0.115745704509018 0.116024979873272 0.124758139458311 0.119108950923483 0.130303297176468 0.120711112889365 0.121178935801126 0.118566022490440 0.114009478233680 0.121961495077612 0.120912444436748 0.117516919035223 0.122482117333591 0.120940995858386 0.121921279368196 2 2 - 15304172 15304538 15304357.545 15303780 15305593 - gene protein_coding_gene FALSE TRUE AT2G36460.1 fructose-bisphosphate aldolase, putative similar to fructose-bisphosphate aldolase, putative [Arabidopsis thaliana] (TAIR:AT5G03690.2); similar to fructose-bisphosphate aldolase, putative [Arabidopsis thaliana] (TAIR:AT3G52930.1); similar to fructose-bisphosphate aldolase [Persea americana] (GB:CAB77243.2); contains InterPro domain Fructose-bisphosphate aldolase, class-I; (InterPro:IPR000741) 0.90657039669156 9.61158859205427 1.19398425083116e-06 0.0181796042031552 9.91029997565843 18.3564080655994 0.90657039669156 0.0796178247123282 AT3G47430_at 8.01090706644162 7.9348863190076 8.18889612668928 8.07861708852999 8.08103682446546 7.7590600177181 9.59620956025315 9.96307397814463 8.60262047254106 9.26742418565495 7.31726375370277 7.4033701187626 8.76126889865743 8.10783192940072 7.16911731532925 8.85947698345254 8.67296208160526 8.0071695107997 9.2760270038044 0.202431930133394 0.195566462815162 0.204537849086322 0.20115691531712 0.188505295605680 0.201448530060581 0.204031845802234 0.201950504684133 0.213000300716052 0.189920088553075 0.199103225358566 0.215347057003837 0.197697925040866 0.201040414342628 0.214014663854292 0.198066250702948 0.202292524207165 0.203801217085121 0.188505295605680 3 3|0 +|/ 17491872 17492636 17492358.7 17491588 17492777 + gene protein_coding_gene FALSE TRUE AT3G47430.1 peroxisomal biogenesis factor 11 family protein / PEX11 family protein member of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation. similar to peroxisomal biogenesis factor 11 family protein / PEX11 family protein [Arabidopsis thaliana] (TAIR:AT1G47750.1); similar to Os04g0534600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053418.1); similar to Os03g0302000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049868.1); similar to Peroxisomal biogenesis factor 11 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95492.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) -0.930374848323696 -9.60291897792129 1.20461346011136e-06 0.0183402399301955 9.90478944997683 16.9945849366382 -0.930374848323696 0.0875935605926446 AT1G52190_at 9.22825747198706 9.37564733635698 8.239017738468 8.2874712448454 8.89597241834479 8.86213494876784 7.97151200045263 7.89820072494013 9.02381785089784 8.86837998574783 11.1193177947202 11.3120130329583 10.9383289027416 11.0869905892959 11.3794246916058 11.2023234581033 10.2358487906359 11.1925068552532 10.3559749432168 0.130967987329819 0.134844635746038 0.142294526562365 0.141999805702651 0.134637601508074 0.139327383631322 0.144318433955759 0.144382806653847 0.139575001733164 0.131228402961776 0.135513383827327 0.136118299667244 0.135615735337375 0.136859126784983 0.139335920120811 0.136058177108034 0.134482281459940 0.141368736866126 0.135503603128073 1 1 + 19441799 19442201 19442007.636 19438178 19442640 + gene protein_coding_gene FALSE TRUE AT1G52190.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G16180.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABD32296.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABD32298.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.797515687649547 9.59896073468882 1.20950039480799e-06 0.0184134340105569 9.90227097175112 18.8319776643712 0.797515687649547 0.0302677662374854 AFFX-Athal-Actin_3_f_at 10.4425622130867 10.605445828508 11.1392925175382 11.3390214644017 11.0968746962604 11.0504580078298 10.4567274029161 10.7721519449670 10.747059475048 10.7605482480066 12.1442456237192 11.9722739840298 11.9530318416219 11.9070917812934 12.0794411554253 11.8517222004744 11.6101865058827 11.8454106300760 10.7317212308123 0.0962077341070996 0.0903613029113554 0.0961052954786268 0.0875269964615041 0.087585871065636 0.100492333575670 0.0878395315750105 0.0897585895488421 0.095881637377012 0.0886434655850628 0.090589629630129 0.0912811512375993 0.0862661373978748 0.0916975696968426 0.0904891610480265 0.0904116145250746 0.100814543311233 0.0870768844379529 0.0910718515880679 NA NA NA NA NA FALSE FALSE 0.88058615241558 9.59861883755012 1.20992351404573e-06 0.0184186656543182 9.90205336023684 22.1962509844073 0.88058615241558 0.0709460542461477 AT1G33600_at 9.20862736519838 9.68344991217208 10.2051537706463 10.2615414359109 10.7904132713267 10.3371714989367 9.78910180856088 9.73689296293306 9.08407147554698 9.23840829004578 10.5605400674103 10.7035470687758 10.7012215202776 10.3530099670285 10.0260821135754 10.414354714905 9.93239481203572 10.2620641465488 9.02896887233936 0.132225883683065 0.129865375781755 0.129961921903488 0.125041428975119 0.129682446243971 0.132249543694209 0.136366770514370 0.129752605950387 0.142250979272923 0.128738215107927 0.130393626056116 0.129406394913715 0.129018135660306 0.133610444933010 0.132093272143142 0.128545811565601 0.133948103102815 0.129747066310762 0.129026549910389 1 1 + 12181635 12182130 12181837.545 12180756 12182343 + gene protein_coding_gene FALSE TRUE AT1G33600.1 leucine-rich repeat family protein similar to disease resistance protein-related / LRR protein-related [Arabidopsis thaliana] (TAIR:AT2G26380.1); similar to disease resistance protein-related / LRR protein-related [Arabidopsis thaliana] (TAIR:AT1G33590.1); similar to H0402C08.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86230.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.02302711866566 9.5921477666222 1.21796215177445e-06 0.0185398198743106 9.8979323722897 19.7446946768591 1.02302711866566 0.114371968409967 AT1G64710_at 6.8302076347477 6.99642306512925 8.5237931699838 8.87014167035112 8.31121787466797 8.41053376059067 5.75244191089428 6.17562256662581 6.2807057481605 6.08419731075839 5.56801528227813 6.30865171530021 5.77951212594574 6.13984199949937 5.46794203738406 5.29397455156495 6.28776597221505 5.70479186167194 5.53390552850857 0.286378592892039 0.286924140382246 0.290769273046345 0.296454757924301 0.30630771542292 0.294903551225988 0.279672831662218 0.279672831662218 0.283763806066198 0.286447816012521 0.287068645084507 0.282284638391236 0.280532881474933 0.279834877188243 0.279672831662218 0.280689561952694 0.288011476823976 0.279672831662218 0.286672116412844 1 1|0 +|/ 24049225 24049943 24049592.7 24048208 24050215 + gene protein_coding_gene FALSE TRUE AT1G64710.1|AT1G64710.2 alcohol dehydrogenase, putative|oxidoreductase/ zinc ion binding similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G32780.1); similar to ADH-like UDP-glucose dehydrogenase [Nicotiana tabacum] (GB:AAT40104.1); similar to Os10g0159800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064203.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154)|similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G32780.1); similar to Os10g0159800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064203.1); similar to alcohol dehydrogenase [Nicotiana tabacum] (GB:CAA57446.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.97139511931954 9.58494375789247 1.22697931559947e-06 0.0186758521627395 9.89333956000427 13.3763384428113 0.97139511931954 0.100391151723448 AT1G73500_at 9.64594260946149 9.97011390832808 10.0327173451358 10.2925905322557 10.0293022937811 9.91980399939958 7.27826959939117 8.21730891714797 8.4321520857637 7.84574778988252 9.34202804254114 8.94498683226221 9.61844006745785 9.25297503313597 8.51275590923581 9.62877349899287 9.45633253426977 9.4347037386624 7.63633846331942 0.146557919936617 0.150407496405279 0.147802444155037 0.149012844835765 0.15109769722565 0.151142234319015 0.155277422312387 0.146873420172428 0.153908027879565 0.161537713427491 0.142379201749855 0.142379201749855 0.148355618217285 0.152514915004099 0.160920954162784 0.142645409285688 0.148390473305850 0.143381682633324 0.168587787790781 1 1 - 27643117 27643610 27643376.091 27642752 27644190 - gene protein_coding_gene FALSE TRUE AT1G73500.1 ATMKK9 (Arabidopsis thaliana MAP kinase kinase 9); kinase member of MAP Kinase Kinase similar to ATMKK7 (MAP KINASE KINASE7), kinase [Arabidopsis thaliana] (TAIR:AT1G18350.1); similar to double MYC-tagged mitogen activated protein kinase kinase 9 [synthetic construct] (GB:ABF55669.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.29657823073770 9.5829358720862 1.22950541436428e-06 0.0187130724066244 9.89205850926568 18.0458997689751 1.29657823073770 0.178708233343900 AT3G18750_at 3.18128301868273 2.99854832007069 3.60911162023872 3.55753084965129 3.14397490845496 3.64883726213232 5.64319694939841 5.61328620248995 5.48196703491038 5.6145270539959 4.21487199217344 4.32498003139996 4.98482923721858 4.80024792413976 4.11774778536041 5.12192671897315 5.33384695357924 4.46460089234584 5.98900399835161 0.243635155587911 0.243022444087068 0.244710570913201 0.242658349892049 0.240893234723982 0.243412333537664 0.239280432214505 0.243280758691403 0.245361619294285 0.248508349989532 0.239280432214505 0.243439761322656 0.240401508896102 0.247372917921473 0.239280432214505 0.242002950690203 0.254969589301197 0.240881428916089 0.244385810704524 3 3 - 6454504 6454971 6454684.909 6454116 6457518 - gene protein_coding_gene FALSE TRUE AT3G18750.1|AT3G18750.2 WNK6 (Arabidopsis WNK kinase 6); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. similar to WNK7 (Arabidopsis WNK kinase 7), kinase [Arabidopsis thaliana] (TAIR:AT1G49160.2); similar to protein kinase [Fagus sylvatica] (GB:CAC09581.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to WNK7 (Arabidopsis WNK kinase 7), kinase [Arabidopsis thaliana] (TAIR:AT1G49160.2); similar to Protein kinase [Medicago truncatula] (GB:ABE83755.1); similar to Os02g0672800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047709.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.946999774864145 -9.57644617360593 1.23770859604578e-06 0.0188366871232208 9.88791517735497 9.10724487688226 -0.946999774864145 0.093486877163623 AT1G66230_at 4.84903666999046 5.05109533799158 3.91760624188644 3.82984459908595 4.81571066673119 4.87618294075536 6.94410572573007 6.17480602223879 6.82102796782736 6.58747651777554 6.55202961795312 6.03239503149983 5.8975988498843 6.2562945067471 5.67284004514452 6.1536176038031 5.17622882661309 6.08501231958816 7.0389039029767 0.24018195730747 0.237704400916497 0.267565136622666 0.258370948411967 0.246169441518495 0.254453237427221 0.247585356673291 0.245139676163708 0.256849892569896 0.237704400916497 0.240035774361199 0.241678494224677 0.239217850443541 0.247937909170824 0.243263110377744 0.237704400916497 0.249337208376634 0.237704400916497 0.253423739389121 1 1 + 24681330 24681880 24681623.636 24680817 24682078 + gene protein_coding_gene FALSE TRUE AT1G66230.1 MYB20 (myb domain protein 20); DNA binding / transcription factor Encodes a putative transcription factor (MYB20). similar to MYB43 (myb domain protein 43), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G16600.1); similar to myb-related transcription factor [Solanum lycopersicum] (GB:CAA67600.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.11623776145602 -9.55199088315734 1.26915704616359e-06 0.0193140319285176 9.87226269621284 11.4543259737249 -1.11623776145602 0.138876636290773 AT1G62430_at 9.08224384637578 9.41477917361982 9.59920874165893 9.52852184527579 10.0804760113884 9.70711204346236 9.26164896013359 9.13035404013755 8.2752822177651 7.81599048822715 9.55832234231031 9.04008955765723 9.52913771787659 9.45256251324225 9.11928607024013 9.02300338129249 9.00068725631948 9.00878467966338 7.48755424362282 0.135787879069296 0.134615437545602 0.132643105167260 0.131923902365181 0.134945002977677 0.136303592228968 0.135109264573209 0.135517396352981 0.136739199959531 0.137252136352636 0.132269327827141 0.133466305649597 0.130293752250554 0.135147636325729 0.136156888405681 0.130293752250554 0.164999004565432 0.141526404182156 0.151769840226197 1 1|0 -|/ 23109997 23111383 23110766.111 23109606 23113141 - gene protein_coding_gene FALSE TRUE AT1G62430.1 ATCDS1 (CDP-diacylglycerol synthase 1); phosphatidate cytidylyltransferase Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis. Identical to Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) (CDS1) [Arabidopsis Thaliana] (GB:O04928;GB:O48808); similar to phosphatidate cytidylyltransferase [Arabidopsis thaliana] (TAIR:AT4G22340.3); similar to Os01g0758400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044302.1); similar to Phosphatidate cytidylyltransferase [Medicago truncatula] (GB:ABD33020.1); similar to Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) (GB:O04940); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) 0.93172418099994 9.52777462425744 1.30115177766201e-06 0.0197996266006828 9.85670217095407 18.0135896692716 0.93172418099994 0.0902899983805013 AT3G15520_at 7.01504951684444 6.70097804712759 5.13883508618981 5.02942491802003 5.48037835927458 5.59430160898513 7.74887500120517 7.65742131290016 7.60504337040248 8.13060763554334 8.70692758355466 8.7909572456874 7.16802888430241 8.06119320185046 8.94438878216427 8.08134934300372 6.90532606569809 8.28363434254734 7.82500302730028 0.204069979770365 0.202709079016938 0.209812964906717 0.210221621070969 0.219275582822845 0.222056828637080 0.198181180126038 0.207220330013487 0.206329122001171 0.199859245869184 0.199452877304705 0.205961631117474 0.209641489481764 0.196872790944305 0.203656807553216 0.196872790944305 0.207032371933193 0.200922710686857 0.199057038033486 3 3|0 -|/ 5249779 5250787 5250361.111 5248936 5252513 - gene protein_coding_gene FALSE TRUE AT3G15520.1 peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase similar to peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative [Arabidopsis thaliana] (TAIR:AT3G01480.1); similar to Peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor (PPIase CYP37) (Rotamase CYP37) (Thylakoid lumen PPIase of 38 kDa) (p38) (TLP38) (GB:P82869); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) -0.852835819858138 -9.52381625479783 1.30646409216934e-06 0.0198791576264487 9.85415286732653 14.2812964940766 -0.852835819858138 0.0628628675454847 AT2G34930_at 3.7396398483973 4.05448176683802 1.56920147561917 1.35147719208747 1.46928311797570 1.67143845263736 3.06950249837818 3.32514556130671 2.98054471951316 2.63055298475503 3.65397507297384 3.61985045630992 2.69024526020084 2.87337122381986 3.91472245082763 3.74742816294272 2.19097066631557 3.07286764319167 3.47783848558537 0.236495407967523 0.232232879205495 0.247117389114001 0.243365552575086 0.231270028498656 0.228972323446072 0.228501519833275 0.227395652478178 0.227395652478178 0.232870429074893 0.239993203021309 0.227395652478178 0.227395652478178 0.227965011865042 0.231917231669121 0.228312515382674 0.227395652478178 0.234478432373759 0.228787745336891 2 2 - 14744334 14744820 14744621.273 14744145 14746983 - gene protein_coding_gene FALSE TRUE AT2G34930.1 disease resistance family protein similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT1G47890.1); similar to Leucine-rich repeat; Leucine-rich repeat, cysteine-containing type [Medicago truncatula] (GB:ABE79507.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.920529444347613 -9.52057884314122 1.31082629373991e-06 0.0199442220592528 9.85206666890725 5.65630837100029 -0.920529444347613 0.0870018363720295 AT4G35480_at 7.68355488334338 8.1701480046603 7.8247828590538 8.02354499266056 8.42717143637666 8.56063312326455 6.54249412064937 6.70123941707039 6.64468348045768 6.2700516423321 7.23755235660118 7.14471392472454 7.64006310154691 7.72741377399504 7.08223827770353 6.99122232248134 7.07860014961016 7.400935530484 6.02753076018124 0.195701447909513 0.198806826700989 0.213339073482981 0.200071180100573 0.20019558474586 0.209458334208109 0.195439330161067 0.204185694766482 0.214004698572706 0.194973649798635 0.193439657693043 0.192539000165551 0.191446688621238 0.188628145605576 0.190880443022264 0.189213291838715 0.189873825070512 0.194061907412780 0.201038080513091 4 4 - 16852308 16852808 16852535 16852079 16852952 - gene protein_coding_gene FALSE TRUE AT4G35480.1 RHA3B (RING-H2 finger A3B); protein binding / zinc ion binding Encodes a putative RING-H2 finger protein RHA3b. Identical to RING-H2 finger protein ATL4L (RING-H2 zinc finger protein RHA3b) (ATL4L) [Arabidopsis Thaliana] (GB:Q9ZT49); similar to RHA3A (RING-H2 finger A3A), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G17450.1); similar to zinc finger protein [Brassica rapa] (GB:ABK56013.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE78080.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.954213899197184 9.5036262705486 1.33392758801669e-06 0.020294374324086 9.84112453955074 14.5426616332850 0.954213899197184 0.0977860445908737 AT1G16670_at 8.82535072998177 8.92489691804684 9.43420380187777 9.47258367182633 8.5337784222717 8.36784562816168 7.09961979852374 7.13183491095702 6.47113739086935 6.03739919070381 6.730657119659 6.67850504141879 6.37198050866555 7.35038175454722 6.10919458007944 7.22280456580763 7.20749088833128 7.03631568394591 6.11652389397121 0.240266134612738 0.235978951512559 0.237756956065120 0.240796805839473 0.235698676434656 0.244720008861482 0.238707711638139 0.235535152177313 0.258245171919794 0.247140265220013 0.240946620049863 0.247470203472345 0.242783395529407 0.235488364015273 0.235488364015273 0.245942461205426 0.245935535950486 0.244326939024203 0.243656863489569 1 1|0 +|/ 5698729 5699428 5699201.6 5697317 5699762 + gene protein_coding_gene FALSE TRUE AT1G16670.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G09010.1); similar to Os04g0619400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053898.1); similar to H0313F03.21 [Oryza sativa (indica cultivar-group)] (GB:CAJ86134.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.793370033807875 9.47855596457914 1.36890210392627e-06 0.0208251077070304 9.82488772500486 14.9971491150333 0.793370033807875 0.0345910099963773 AT1G70830_at 6.34676799493895 6.0211303113872 4.57007535963277 4.95720274423933 3.9521169808966 3.81631964701307 8.68244236432202 9.01291700516773 4.97326051090978 8.76138631910425 9.2200133557091 9.54888414142193 8.79069014191613 9.8220998119181 8.42131486037547 6.94455293280406 9.13061203524245 9.05775432191258 9.19447591524347 0.245246036027308 0.243157304597968 0.255737877082551 0.245685610855450 0.262717192325611 0.25529179616487 0.235498051868055 0.231822999484991 0.251312440822115 0.231822999484991 0.235174691464101 0.235211607932361 0.231822999484991 0.236927609402477 0.231914545481716 0.243919629399435 0.233271093091416 0.232045627176191 0.231822999484991 1 1 - 26713985 26714474 26714253.778 26713609 26715124 - gene protein_coding_gene FALSE TRUE AT1G70830.1|AT1G70830.2|AT1G70830.3|AT1G70830.4 Bet v I allergen family protein|MLP28 (MLP-LIKE PROTEIN 28) Identical to MLP-like protein 28 (MLP28) [Arabidopsis Thaliana] (GB:Q9SSK9); similar to MLP34 (MLP-LIKE PROTEIN 34) [Arabidopsis thaliana] (TAIR:AT1G70850.3); similar to major latex-like protein [Prunus persica] (GB:AAK14060.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916)|Identical to MLP-like protein 28 (MLP28) [Arabidopsis Thaliana] (GB:Q9SSK9); similar to Bet v I allergen family protein [Arabidopsis thaliana] (TAIR:AT1G70850.2); similar to major latex-like protein [Prunus persica] (GB:AAK14060.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) -0.983968225465943 -9.47316276229419 1.37655485011004e-06 0.0209401523798739 9.82138620192813 14.1748871085739 -0.983968225465943 0.107176864698593 AT4G31550_at 6.47616769522006 6.41330497639372 6.54391437918047 7.044102471426 6.84897748064145 6.6761852147026 6.57664843934094 6.74244545513465 6.6279205103487 5.58519994551697 7.60400915184272 7.6321882324044 7.36788515761237 8.11528173359976 7.29633661424115 7.52444001431748 7.13481773499584 7.20125482359357 5.23740446627026 0.179747355226965 0.179747355226965 0.186716016579262 0.187700096768056 0.183230816037173 0.197566809700054 0.184483197091277 0.18496109096518 0.194126180407882 0.212468133288235 0.181620605750841 0.183718645579532 0.179747355226965 0.184264777029547 0.187220898700359 0.184995246635916 0.182480455318522 0.179747355226965 0.211202653660370 4 4|0 -|/ 15290130 15291060 15290854.2 15289953 15291545 - gene protein_coding_gene FALSE TRUE AT4G31550.1|AT4G31550.2 WRKY11 (WRKY DNA-binding protein 11); transcription factor member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae. Identical to Probable WRKY transcription factor 11 (WRKY DNA-binding protein 11) (WRKY11) [Arabidopsis Thaliana] (GB:Q9SV15;GB:Q8H1G1;GB:Q93YX0); similar to WRKY17 (WRKY DNA-binding protein 17), transcription factor [Arabidopsis thaliana] (TAIR:AT2G24570.1); similar to WRKY transcription factor 11 [Capsella rubella] (GB:AAS66778.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)|Identical to Probable WRKY transcription factor 11 (WRKY DNA-binding protein 11) (WRKY11) [Arabidopsis Thaliana] (GB:Q9SV15;GB:Q8H1G1;GB:Q93YX0); similar to WRKY17 (WRKY DNA-binding protein 17), transcription factor [Arabidopsis thaliana] (TAIR:AT2G24570.1); similar to WRKY transcription factor 11 [Capsella rubella] (GB:AAS66779.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.946919143539612 9.47142740478689 1.37902708805703e-06 0.0209763810364355 9.8202588759766 13.3159024257739 0.946919143539612 0.096583367035429 AT2G29680_at 2.56281241642378 3.03756316644937 3.45086042922119 3.61078901170294 5.26718864494927 5.15061738144374 3.96316085579061 3.63737951585126 2.79917475879278 3.01427894837019 3.23925834175375 3.18398478438497 3.4166961228465 4.73263720072597 3.13154926882286 3.47394734860900 4.59317494260621 3.90761825142666 2.66821259343787 0.214680891819640 0.206452716287921 0.206452716287921 0.207263256869679 0.223485100143367 0.221101169657744 0.206908295866621 0.212970637379015 0.216642732068163 0.214105362103723 0.215078987286198 0.210142481240548 0.206452716287921 0.225452491123223 0.212565559508799 0.207473317838857 0.219559511856284 0.211770339525881 0.21156121589101 2 0|2 /|+ 12698509 12699560 12698957.333 12696626 12700101 + gene protein_coding_gene FALSE TRUE AT2G29680.1|AT2G29680.2 CDC6 (CDC6) Encodes cell division control protein 6 (CDC6). similar to cell division control protein CDC6b, putative (CDC6b) [Arabidopsis thaliana] (TAIR:AT1G07270.1); similar to Os01g0856000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044845.1); similar to putative cell division control protein 6 [Oryza sativa (japonica cultivar-group)] (GB:BAD82304.1); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.976135530323622 9.4600979271998 1.39528589532033e-06 0.0212222984678222 9.81289122199916 7.10358661915266 0.976135530323622 0.105362831955288 AT4G36990_at 8.29364351136656 8.22835582050042 9.2690910704782 9.03991198345235 8.23187028130505 7.28886792237755 5.17443181106612 5.28637069284759 4.81447163936857 5.5202531655711 5.50877817064579 5.64212060160331 5.79224544461635 5.91625140507022 4.90825971459174 6.66449661488805 6.62028762230768 5.36103562705974 4.77990057145708 0.231600096499257 0.233492741541632 0.237661063361376 0.237496276374418 0.23632354196639 0.232794634798332 0.231468261121351 0.233575316538475 0.242137244900413 0.229151269358005 0.231245562125691 0.231979407698362 0.231018944260052 0.242707510798603 0.228280224041035 0.228280224041035 0.233387913190117 0.234167360767838 0.23484427772787 4 4 + 17441122 17441661 17441379.727 17440287 17442145 + gene protein_coding_gene FALSE TRUE AT4G36990.1 HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. Identical to Heat stress transcription factor B-1 (AtHsfB1) (Heat shock factor protein 4) (HSF 4) (Heat shock transcription factor 4) (HSTF 4) (HSFB1) [Arabidopsis Thaliana] (GB:Q96320;GB:O23186); similar to AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62020.1); similar to heat shock factor [Nicotiana tabacum] (GB:BAA83710.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 1.23760539837853 9.45892323829632 1.39698350713693e-06 0.0212467221600455 9.8121265393824 13.0215143161226 1.23760539837853 0.169431854964971 AT2G45800_at 1.67379833054349 1.63086235520202 1.75091406496464 1.77923570160792 1.72532224761071 1.46384707371302 3.49301019471756 3.01724049566875 3.65095408308989 3.53542471299975 2.30113090479492 2.48797877889065 2.70421466743349 2.44120691935642 2.26160936060019 2.74965883923931 2.54115964574044 2.30786761262718 3.53977481363882 0.195414348086521 0.194716948309314 0.201636635048232 0.194192495354700 0.194192495354700 0.195052476829603 0.214829357883859 0.200787478351148 0.194192495354700 0.201726143339793 0.199518630116417 0.197487793760229 0.195395153623259 0.194501863726355 0.199136423093143 0.196120776626251 0.194192495354700 0.198665525337749 0.194192495354700 2 2|0 -|/ 18865269 18865962 18865501.4 18865015 18866263 - gene protein_coding_gene FALSE TRUE AT2G45800.1|AT2G45800.2 LIM domain-containing protein|zinc ion binding similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G61230.1); similar to LIM, zinc-binding; Zinc finger, RING-type [Medicago truncatula] (GB:ABE84732.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781) -0.937464633774856 -9.4506053438577 1.40906830303480e-06 0.0214291107525532 9.80670771412331 5.09164774683425 -0.937464633774856 0.0943698176150605 AT4G02990_at 5.80651108351206 6.2040631837047 5.24707532631359 5.48912282842147 5.24454147823456 5.29127333076426 7.07963020962536 6.7013290885126 4.63546143977925 5.43163620624614 3.77879478573753 4.31674579346664 4.61336247472414 3.80150166793433 4.73017007030442 4.98937037968278 4.58640107592819 3.63253310989743 5.28335990044286 0.215260295186663 0.216791368684324 0.212409928104230 0.220522425485124 0.216045414319267 0.217436915294747 0.216582158827187 0.216311418155146 0.216724055864035 0.212409928104230 0.217454617248947 0.215709038725893 0.212409928104230 0.214519640617620 0.219254287555564 0.212960946825354 0.233062887344653 0.223923965871023 0.221290866021439 4 4 + 1323220 1323670 1323391.636 1321859 1324004 + gene protein_coding_gene FALSE TRUE AT4G02990.1 mitochondrial transcription termination factor family protein / mTERF family protein similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT2G44020.1); similar to Mitochodrial transcription termination factor-related [Medicago truncatula] (GB:ABE94205.1); similar to Os05g0404000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055500.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) -0.97029470642593 -9.44635946121037 1.41528056482568e-06 0.0215221715493040 9.80393885445525 10.5944078670688 -0.97029470642593 0.104110794650298 AT4G37310_at 8.48592679614965 8.51764805405096 8.55677650003096 8.67802023519966 7.8860077140986 7.56371484740798 8.95332288556696 8.77368652075742 7.67659274743758 8.8324950242299 6.68741424587742 6.91165077114238 7.3999728824616 7.33757358469315 6.34700082512073 7.60846518108444 7.85921760937554 7.37217810473517 8.66993828641491 0.179329988676595 0.175172596891162 0.179079066491926 0.180400776688412 0.173281676584214 0.184737248162229 0.176649181421623 0.175683399218399 0.182306744547227 0.173600392416739 0.174590665469196 0.180365289090725 0.185820826446869 0.185275380508234 0.191704061026723 0.173986832540418 0.184209079668765 0.184885421506963 0.172873593747866 4 4 - 17556161 17556574 17556366.636 17555921 17558887 - gene protein_coding_gene FALSE TRUE AT4G37310.1 CYP81H1 (cytochrome P450, family 81, subfamily H, polypeptide 1); oxygen binding member of CYP81H similar to CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37370.1); similar to CYP81D5 (cytochrome P450, family 81, subfamily D, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37320.1); similar to CYP81D4 (cytochrome P450, family 81, subfamily D, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37330.1); similar to isoflavone 3'-hydroxylase [Medicago truncatula] (GB:AAQ20041.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.857045387706551 -9.4427376315799 1.42060317782086e-06 0.0216016919219440 9.80157545402671 16.2186093624522 -0.857045387706551 0.0674354294848316 AT2G23680_at 6.47852639064646 6.81843541644371 7.18478916395487 7.33418567724125 5.94898203165659 5.09770155608469 2.81320473261608 2.49298194723955 3.0415393541127 3.08053881558890 3.71197174274867 3.97156209098983 3.33141600772956 4.02575237454345 3.29208865763822 3.63080144051785 4.19304411069975 4.63785129659862 3.21985293254062 0.318081643053013 0.317105249789348 0.322751947901084 0.305014325696007 0.307809792331327 0.305671267377801 0.305443378558666 0.304947338222862 0.3051561977082 0.296786370093293 0.297898558157419 0.296738074790797 0.308468818455511 0.313301325694226 0.301320983681675 0.296738074790797 0.300553459820301 0.296738074790797 0.305915828730167 2 2|0 +|/ 10073346 10074191 10073719.9 10073243 10074535 + gene protein_coding_gene FALSE TRUE AT2G23680.1 stress-responsive protein, putative similar to stress-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G37220.1); similar to cold acclimation protein COR413-PM1 [Zea mays] (GB:AAO24629.1); contains InterPro domain Cold acclimation WCOR413; (InterPro:IPR008892) 1.23798070830020 9.44204998654737 1.42161617955684e-06 0.0216156740101618 9.8011265794966 9.00274486411739 1.23798070830020 0.170006152310512 AT1G78600_at 9.9764546725303 10.2880251655490 10.5335643352307 10.5557053584891 11.0647906709277 10.4082452052966 9.89162729799572 9.49044959199816 8.05971552766082 8.65465950776544 10.1366234982437 9.81473664842244 10.2558268126058 10.3536481830599 9.222564048735 9.67917944236186 10.2601419874803 9.98041651619288 8.62282138691925 0.102185309651799 0.101687822677695 0.104787190656560 0.101687822677695 0.101687822677695 0.103096032380611 0.103613819248147 0.105524253734533 0.133864170082926 0.108774602588316 0.105706008450717 0.101687822677695 0.101687822677695 0.101687822677695 0.111593647139083 0.102575461623479 0.110821593995292 0.107448492835642 0.120197385376127 1 1 + 29572783 29573501 29573132.273 29572080 29573752 + gene protein_coding_gene FALSE TRUE AT1G78600.1 zinc finger (B-box type) family protein Identical to Putative salt tolerance-like protein At1g78600 [Arabidopsis Thaliana] (GB:Q9SYM2;GB:Q8RWG4); similar to STO (SALT TOLERANCE), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G06040.1); similar to CONSTANS interacting protein 1 [Lycopersicon esculentum] (GB:AAS67368.1); similar to Os01g0202500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042327.1); similar to Os06g0152200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056834.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 1.12304860591182 9.438527463367 1.42681764057135e-06 0.0216933354072469 9.79882639642357 19.4804199287120 1.12304860591182 0.143704357051844 AT2G40140_at 8.57671797471206 8.65090965538434 9.24384773413118 9.20810719175321 8.16561236682402 7.92427430401366 5.33622155408057 5.79141248932796 6.06850827647495 5.01562907468697 5.5504164888534 5.70710571958422 5.33639687151125 5.71204128522589 5.34077551504234 5.80488320827976 5.45524146262965 5.55815912453165 4.69430537368737 0.266502261060934 0.262669338817791 0.268277922795794 0.270776456426948 0.263832078810653 0.271434486461203 0.265239055978323 0.261875082897384 0.272199657414428 0.272218313886881 0.261875082897384 0.261875082897384 0.261875082897384 0.261875082897384 0.261875082897384 0.261875082897384 0.270825255896868 0.265310233452099 0.272999594176631 2 2 + 16780863 16781341 16781071.636 16779151 16781735 + gene protein_coding_gene FALSE TRUE AT2G40140.1|AT2G40140.2 CZF1/ZFAR1; transcription factor|CZF1/ZFAR1 similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT3G55980.1); similar to Cys-3-His zinc finger protein [Capsicum annuum] (GB:ABI30334.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.922645765989228 9.43488887513869 1.43221211078759e-06 0.0217739207203038 9.79644904709915 13.2709420926486 0.922645765989228 0.0902915324469755 AT2G01610_at 0.956521271374896 0.941616537573017 1.33806351193960 0.968243721198097 1.27273170723944 1.75660386122258 0.54512052311283 0.881115648795457 0.78893225958321 1.18002414599450 2.79120701027209 1.93072583594601 2.18512272232171 2.74975524911754 2.13439650052738 1.99215754125011 2.35205868843928 2.68938364738554 0.427415106325486 0.238904329930796 0.230444981071378 0.251861753431857 0.230444981071378 0.234932007663807 0.233954797023799 0.239753919617975 0.230444981071378 0.242889603502563 0.230444981071378 0.230499238470689 0.236811162554941 0.232978913009535 0.237611796449578 0.240120800315198 0.23502137533301 0.246156949659795 0.236135218234028 0.237061055211564 2 2 - 274154 274625 274433.455 274123 274819 - gene protein_coding_gene FALSE TRUE AT2G01610.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G14890.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 1.02856380031280 9.43094410418136 1.43808545616293e-06 0.0218617751045889 9.7938700652988 2.65844779949458 1.02856380031280 0.120396035586946 AT4G04630_at 5.09908563722704 5.86027292934267 6.44714623349854 6.55692252013547 7.35366242048619 7.60101965851058 6.15822835413147 6.2152554124277 5.75743821294942 5.55316774263113 7.42150885862145 6.70438509184174 7.10020651533724 6.90235142661128 5.81620769813412 7.36409315423809 7.58198293946409 6.54598132162068 6.3048472520964 0.225251257610509 0.218514952592543 0.221779132917708 0.222539312939720 0.216469326645896 0.234711042320229 0.226300704918387 0.234954425247518 0.228692438672843 0.228666812973977 0.226499056964333 0.219942426099625 0.234139397418393 0.223689183233936 0.224809619297519 0.216219190930777 0.234022551295916 0.219935367050955 0.227527281447841 4 4 - 2332172 2332619 2332416.091 2331675 2332798 - gene protein_coding_gene FALSE TRUE AT4G04630.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21970.1); similar to Protein of unknown function, DUF584 [Medicago truncatula] (GB:ABE91657.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 1.10712450735837 9.42893939248928 1.4410802399782e-06 0.0219058607279086 9.79255880953597 12.8121528265329 1.10712450735837 0.140152335988843 AT1G21460_at 8.40936475496835 8.85036674524143 7.51374278422972 7.38757476777421 8.39389038692292 7.63724420427326 8.64937985451034 8.8367009325461 5.41826707195757 7.30314402864419 4.04114099962824 5.14727039420396 4.94579247858328 4.57164003800252 4.88410512758108 4.17433282912809 5.70839517323328 5.62112567410801 6.13635771471058 0.286980587196939 0.280033919264843 0.290429457285997 0.283223148698134 0.27744593993101 0.296152254557118 0.282774904223693 0.279298483184386 0.295171808051008 0.281674118429237 0.281351032857786 0.27744593993101 0.283274313692579 0.287206592164647 0.290374773111477 0.280770671724094 0.309262903677027 0.286196970960253 0.282752544556431 1 0|1 /|- 7512283 7512675 7512494.222 7511839 7513350 - gene protein_coding_gene FALSE TRUE AT1G21460.1 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G10850.1); similar to Os05g0426000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055599.1); similar to senescence-associated protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB92465.1); similar to Os01g0881300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044998.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) -1.17626881757271 -9.42627224736316 1.44507507838524e-06 0.0219651411914556 9.79081360527145 13.7961071926813 -1.17626881757271 0.156516798815962 AT2G15970_at 11.1661829940392 11.3364414585631 11.1014158657828 11.1572317119154 11.6939635454537 11.3359375580264 11.0330835164132 11.1247114009977 9.7494111272501 10.4294016013010 11.8404752257936 11.5370144562092 12.2005399938681 11.8975181025743 11.4849461107138 11.4412803205311 11.5586140886937 11.4920396690040 10.1507961204848 0.109546354352019 0.107006677035046 0.113692424190532 0.108978899374624 0.109516726930092 0.116445211950027 0.108501671687781 0.108681140987755 0.130730877561314 0.118356408884079 0.111407364503476 0.107457941153161 0.110239033751443 0.111732724924305 0.107006677035046 0.108560799789987 0.114468874970986 0.109631974781689 0.117684726658561 2 2|0 +|/ 6957276 6958032 6957483.5 6957170 6958274 + gene protein_coding_gene FALSE TRUE AT2G15970.1 COR413-PM1 (cold regulated 413 plasma membrane 1) encodes an alpha form of a protein similar to the cold acclimation protein WCOR413 in wheat. Expression is induced by short-term cold-treatment, water deprivation, and abscisic acid treatment. similar to stress-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G37220.1); similar to putative stress-responsive protein [Tamarix androssowii] (GB:AAT01418.1); contains InterPro domain Cold acclimation WCOR413; (InterPro:IPR008892) 0.864358103684727 9.41796144988714 1.45759996892453e-06 0.0221540619276840 9.78537073424303 22.1393325625333 0.864358103684727 0.0710750547538883 AT3G17820_at 7.76625953585136 7.64124369336069 7.17411142159682 7.3806996498981 7.43223592603714 7.84611231856964 5.08650196066632 5.40341269330427 5.00939157136182 5.19808585080617 6.22494266965442 6.83691100362875 5.87389570085292 6.27439734288423 6.47247371036564 5.80334798473783 6.0301773166479 4.99783608609418 5.24336817292591 0.211437489814171 0.211532725900556 0.209963749176577 0.214572934381633 0.214570265545649 0.20942294889449 0.219636632757898 0.221435175799757 0.2192993348807 0.209237456279855 0.209237456279855 0.212635486814960 0.214528773849557 0.210261770436565 0.216187247369631 0.215657229054687 0.210264721886495 0.216871654120712 0.226641962931838 3 3 + 6098709 6099377 6099047.455 6097420 6099601 + gene protein_coding_gene FALSE TRUE AT3G17820.1 ATGSKB6 (Arabidopsis thaliana glutamine synthase clone KB6); glutamate-ammonia ligase encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium Identical to Glutamine synthetase cytosolic isozyme 1-3 (EC 6.3.1.2) (GLN1;3) (Glutamate--ammonia ligase GLN1;3) (GS1) (GLN1-3) [Arabidopsis Thaliana] (GB:Q9LVI8;GB:Q5PNX0;GB:Q84W44); similar to ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G37600.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to GLN1,4 (Glutamine synthetase 1,4), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G16570.1); similar to glutamine synthetase [Raphanus sativus] (GB:BAA04994.1); similar to Glutamine synthetase nodule isozyme (Glutamate--ammonia ligase) (GS) (GB:P32289); similar to Gln synthetase (GB:1804333D); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) 0.948950610028349 9.39625202443036 1.49087485776217e-06 0.0226583160882695 9.77111830969648 12.5735869458553 0.948950610028349 0.0994174173569323 AT3G04810_at 4.27958265456865 4.27451757435015 3.20914047944245 3.10999281408902 4.17127376526184 3.57385947960297 4.52068184161620 4.47710891247688 4.75649177366431 4.53017620259767 3.56618048067047 4.39396146553817 3.21409903540528 3.6516320137516 3.98792418311829 3.34558537413118 3.33852849733685 3.60469329263498 4.81986199885652 0.257613013660226 0.248726623660953 0.252213433785575 0.254645558743818 0.247679044707699 0.247154252864879 0.248203795752264 0.246201393947841 0.250019193514035 0.246920701578854 0.242911591534057 0.245628372441937 0.252627263064599 0.242911591534057 0.255882440953335 0.246916919010079 0.252871205094761 0.253576495598829 0.252133584283844 3 3 + 1320529 1321074 1320777.182 1317266 1321300 + gene protein_coding_gene FALSE TRUE AT3G04810.1|AT3G04810.2 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54510.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G28290.1); similar to putative LSTK-1-like kinase [Oryza sativa (japonica cultivar-group)] (GB:AAR01739.1); similar to LSTK-1-like kinase [Lycopersicon esculentum] (GB:AAL04423.1); similar to NIMA-related protein kinase [Populus tremula x Populus alba] (GB:AAL79042.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.968128613351693 -9.39235969679595 1.49692718496591e-06 0.0227488024299269 9.7685576647768 8.12202079077411 -0.968128613351693 0.105074018425033 AT4G14420_at 8.62403787300213 8.87406025328661 9.0194259894132 9.29125251141686 8.70277286518112 8.05348314707852 6.052714005666 6.72594586024841 5.46009091457359 4.7642857162389 6.18928971310815 7.58201966537025 6.32954020248915 6.57548790179496 6.79336627359958 5.56459543983105 4.83673531352275 5.87288833030804 4.5356070886205 0.262720626567332 0.260592721291036 0.262591126530283 0.260950969744859 0.266823700342298 0.265835219652824 0.264622462386104 0.257239962042355 0.266226918632085 0.265540400982534 0.258231609878266 0.257239962042355 0.257239962042355 0.257239962042355 0.264192270076588 0.259337522235440 0.271331424128516 0.257239962042355 0.262740422834622 4 4|0 -|/ 8302195 8303708 8302773.222 8301942 8303911 - gene protein_coding_gene FALSE TRUE AT4G14420.1 lesion inducing protein-related similar to lesion inducing protein-related [Arabidopsis thaliana] (TAIR:AT1G04340.1); similar to ORF; able to induce HR-like lesions [Nicotiana tabacum] (GB:AAC49975.1); contains InterPro domain Surfeit locus 4-related; (InterPro:IPR011592); contains InterPro domain HR-like lesion-inducer; (InterPro:IPR008637) 1.24776995604015 9.37914962961635 1.51766699357909e-06 0.0230624676344278 9.7598551205737 13.7369540272353 1.24776995604015 0.174022716450028 AT2G04780_at 3.63177050210283 3.89696648287046 1.4583226291764 1.51367136492455 2.11252835610263 1.84581137681877 4.38362179651444 4.84278411766989 5.34050736319256 5.34921499442237 6.66098556300079 7.57023189757325 4.90915727891982 6.26885500546671 7.47995636045774 5.18484484250567 4.18455427247447 5.99816590508585 5.79512136740147 0.269871435041867 0.262625576504547 0.284775130952914 0.288881794903019 0.292029818589013 0.301983984673748 0.265945324525972 0.271991617430188 0.28537597085104 0.262625576504547 0.267076101375024 0.267139156167908 0.268193396381656 0.28890738135221 0.267751525014544 0.263595013780224 0.269418794586396 0.277310751901640 0.267089128773878 2 2 + 1677728 1678188 1677970.182 1676739 1678452 + gene protein_coding_gene FALSE TRUE AT2G04780.1|AT2G04780.2 FLA7 (FLA7) fasciclin-like arabinogalactan-protein 7 (Fla7) Identical to Fasciclin-like arabinogalactan protein 7 precursor (FLA7) [Arabidopsis Thaliana] (GB:Q9SJ81;GB:Q8LG01); similar to FLA12 (fasciclin-like arabinogalactan-protein 12) [Arabidopsis thaliana] (TAIR:AT5G60490.1); similar to fasciclin-like AGP 12 [Populus alba x Populus tremula] (GB:AAT37955.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -0.959528155343538 -9.37372666500711 1.52627085536675e-06 0.0231916856472977 9.75627718142593 8.72420547778467 -0.959528155343538 0.103161537872789 AT4G20890_at 8.70489309415839 8.8068146127818 8.92008863576452 8.9572611337047 9.35091254830503 9.06027055988885 8.60285825194056 8.45036422424753 6.74570563231448 7.49307649127311 8.64963825541799 8.77830656973237 8.33238896124532 8.42403355214646 8.56485617248203 8.01970887601576 8.07797876187707 8.1250962067333 7.17706980658369 0.199032807545454 0.199766732258398 0.201639726210046 0.202448586987426 0.204269769563277 0.201576084494294 0.201348547333374 0.201579416060267 0.240755721602742 0.209438152717667 0.202431440298521 0.196709503404593 0.203214747459534 0.196709503404593 0.20388563915986 0.199182401140071 0.20440504013026 0.204617585138425 0.206748162617966 4 4 + 11183272 11183795 11183490.818 11182103 11184083 + gene protein_coding_gene FALSE TRUE AT4G20890.1 TUB9 (tubulin beta-9 chain); structural molecule tubulin 9 Identical to Tubulin beta-9 chain (Beta-9 tubulin) (TUBB9) [Arabidopsis Thaliana] (GB:P29517); similar to TUB3 (Tubulin beta-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to TUB6 (BETA-6 TUBULIN) [Arabidopsis thaliana] (TAIR:AT5G12250.1); similar to TUB4 (tubulin beta-4 chain) [Arabidopsis thaliana] (TAIR:AT5G44340.1); similar to beta-tubulin (GB:AAA32757.1); similar to Tubulin beta-7 chain (Beta-7 tubulin) (GB:Q41784); similar to Tubulin beta-3 chain (Beta-3 tubulin) (GB:Q40665); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) 0.83189214151645 9.37040566595785 1.53156585937876e-06 0.0232706116674008 9.75408451612597 16.6117419973556 0.83189214151645 0.059822117422827 AT1G11170_at 4.06073070727863 3.81861547508865 4.34903828761719 4.39895496237911 4.91524860846869 5.10952367193176 3.08683570985049 3.01171239600947 2.89712583697866 2.91947925614346 3.25809106332114 3.31443575773271 3.30105636918094 3.2729193777964 3.28227379928185 3.00567513640380 3.66741689632042 3.50167242662831 2.83285243547429 0.228433723024324 0.225327976886883 0.234009582939237 0.239253743188635 0.237964913031004 0.232865369140429 0.229325791196565 0.239034144635092 0.229756465441755 0.228527081141835 0.225374198549340 0.225136800885075 0.235653709934984 0.230550576227463 0.232182164985830 0.225136800885075 0.225136800885075 0.225136800885075 0.229247209980143 1 1|0 +|/ 3743154 3744314 3743702.667 3740818 3744675 + gene protein_coding_gene FALSE TRUE AT1G11170.1|AT1G11170.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61240.3); similar to putative lysine ketoglutarate reductase trans-splicing related 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD62500.1); similar to Os07g0564800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060006.1); similar to Os06g0731900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058667.1); contains InterPro domain Protein of unknown function DUF707; (InterPro:IPR007877) 0.820503952171718 9.34049355715693 1.58016316225908e-06 0.0240074189242021 9.73428203253594 7.19813003376067 0.820503952171718 0.0559418500497325 AT2G25590_at 7.42491119943405 7.19668354945462 8.01724787401653 7.63902837505401 8.9083673821369 8.18962942308022 5.17058027542676 5.31591436908789 6.73222207404681 6.80795209760505 7.10924642000924 7.12940600992366 7.70096081326352 7.64899288961705 6.64942561155623 8.33024736614952 7.92136763523459 7.39547516178971 7.87423133746094 0.189142426507129 0.18920403736797 0.203230508622597 0.188635811112307 0.195746669317201 0.194773152472428 0.205426885515263 0.209364575497089 0.198362555744132 0.190628580463542 0.192654376455005 0.190258933280966 0.185931424048058 0.196178859210844 0.192965548729009 0.189376254060895 0.186088946318090 0.193904375538598 0.184716518523132 2 2|0 +|/ 10899177 10900716 10900216.222 10898373 10900850 + gene protein_coding_gene FALSE TRUE AT2G25590.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G32440.2); similar to Agenet [Medicago truncatula] (GB:ABE92607.1); contains InterPro domain Agenet; (InterPro:IPR008395) 1.12952549197988 9.33713275990015 1.58572671599718e-06 0.0240903602694292 9.73205110874226 14.5446830100350 1.12952549197988 0.148145719147536 AT1G68130_at 4.62594238064376 4.98595455147079 4.5898578356231 5.17907924402537 6.07842005088264 6.43187286664212 3.61497649029983 3.68890346718505 2.43760073819960 3.24007971771356 4.10973677141032 4.44145608592919 3.27454222732634 4.0406850380683 3.17634836567771 3.9716971288085 3.97397814816771 3.86387705956654 3.46573057517863 0.235772245864153 0.231578156585973 0.227627585682141 0.228710269096857 0.227627585682141 0.238442296430711 0.227661993878901 0.230868967753447 0.232173526762815 0.233988255860139 0.228395196293541 0.228431005397455 0.227627585682141 0.227627585682141 0.242234636467956 0.227627585682141 0.240679973879962 0.243199524960688 0.227627585682141 1 1 + 25537401 25537912 25537644.818 25535907 25538249 + gene protein_coding_gene FALSE TRUE AT1G68130.1|AT1G68130.2 ATIDD14 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 14); nucleic acid binding / transcription factor/ zinc ion binding|ATIDD14 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 14) similar to ATIDD16 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 16), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G25250.1); similar to Os09g0449400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063321.1); similar to putative zinc finger protein ID1 [Oryza sativa (japonica cultivar-group)] (GB:BAD37964.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.07479985149109 9.33702967232046 1.58589770449109e-06 0.0240913720289241 9.73198265919143 8.35154775092154 1.07479985149109 0.134847756599830 AT1G15470_at 7.2696558149278 7.36390358856042 6.40599778429027 6.56726598003063 6.19686385404393 6.33395398150114 7.75250861755466 7.63786309219814 6.36254743826414 6.72421399172257 6.30160236185748 6.70708790442168 5.42389098917022 6.12006784361566 6.5592370374094 6.05643965722734 5.43248593483845 6.36487852791215 6.65620444708128 0.205220711495945 0.205508332116056 0.211313654491515 0.202314724292678 0.208769636662250 0.207149726818590 0.206000209392880 0.202314724292678 0.205446168587745 0.202314724292678 0.209970657905936 0.202314724292678 0.213930859817336 0.210446694893825 0.203677187850397 0.203606054585484 0.208597795618329 0.208310122082732 0.216035930351077 1 1 + 5316907 5317595 5317329.091 5315502 5317858 + gene protein_coding_gene FALSE TRUE AT1G15470.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G15610.1); similar to putative WD-40 repeat protein [Oryza sativa (japonica cultivar-group)] (GB:BAD32940.1); similar to Os02g0205400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046249.1); similar to Os06g0598900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057997.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.795119860988273 -9.30502323936067 1.63996273169759e-06 0.0249110338944863 9.71067520017319 13.2918515430113 -0.795119860988273 0.0447363454845875 AT1G77690_at 4.33297007335258 4.51291239829273 3.92575617142203 4.62045101462643 6.39257652761241 5.39355663067684 5.26533587564417 5.54242901148194 2.15017882359502 2.93111519686807 5.53340931402098 6.80905188013574 6.85432959846154 6.30902914405007 5.23299285420989 5.43251548972591 5.157918168499 5.49059593591876 4.33251689262832 0.261397403411314 0.250596657884886 0.254589451042210 0.248857804865818 0.255523124288037 0.261142195225769 0.257689484802738 0.252701940672548 0.272148555637183 0.256754407445511 0.251999179067337 0.248857804865818 0.253386031446511 0.250581509506001 0.254674787230191 0.250210912829732 0.255512342982819 0.256258840670009 0.256097625261433 1 1 - 29206167 29206853 29206603 29205835 29208234 - gene protein_coding_gene FALSE TRUE AT1G77690.1 amino acid permease, putative Identical to Auxin transporter-like protein 3 (AUX1-like protein 3) (LAX3) [Arabidopsis Thaliana] (GB:Q9CA25); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT2G21050.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT5G01240.1); similar to AUX1 (AUXIN RESISTANT 1), amino acid permease/ transporter [Arabidopsis thaliana] (TAIR:AT2G38120.1); similar to Auxin transporter-like protein 5 (AUX1-like protein 5) (MtLAX5) (GB:Q8L883); similar to Auxin transporter-like protein 3 (AUX1-like protein 3) (MtLAX3) (GB:Q9FEL6); similar to auxin influx carrier [Lupinus albus] (GB:CAJ84440.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 1.44210828674442 9.29552925223766 1.65638078599639e-06 0.0251587677584991 9.70433354143742 9.49345709746775 1.44210828674442 0.218200008280547 AT1G67660_at 7.98653778545202 8.24649373079883 8.2267103459233 8.08527270825625 8.59584535745775 8.15512124056793 7.5023880289776 7.1535490172303 5.60397639908173 6.2920212523603 7.37146803721781 7.49800994444043 7.46748027058725 7.59731171174709 7.57489809022905 7.15659096986293 7.55096095316556 7.11533723615254 6.13901193161064 0.189711354315210 0.190032799426673 0.196940799208647 0.203002628489442 0.200672997920416 0.195756952391488 0.192260731221040 0.19436016706166 0.220419230840250 0.197586909858191 0.196131646905882 0.189711354315210 0.197341402601873 0.189711354315210 0.198205935959789 0.189711354315210 0.193020277902034 0.202103476321216 0.202495972959853 1 1 + 25368150 25368706 25368396.636 25367198 25368892 + gene protein_coding_gene FALSE TRUE AT1G67660.1|AT1G67660.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13810.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05466.1); contains domain no description (G3D.3.90.320.10); contains domain ALPHA/BETA HYDROLASE RELATED (PTHR10992:SF3); contains domain ALPHA/BETA HYDROLASE RELATED (PTHR10992); contains domain Restriction endonuclease-like (SSF52980)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13810.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05466.1); similar to Os08g0236700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061316.1); contains domain no description (G3D.3.90.320.10); contains domain ALPHA/BETA HYDROLASE RELATED (PTHR10992:SF3); contains domain ALPHA/BETA HYDROLASE RELATED (PTHR10992); contains domain Restriction endonuclease-like (SSF52980) 0.974166281547198 9.28478124277133 1.67518224821958e-06 0.0254426679859589 9.69714245175958 14.7080782831794 0.974166281547198 0.109928281251299 AT2G21640_at 3.25587161995437 3.01705442881413 3.23124290301924 3.27774395913052 4.2453656728853 4.20095438929091 2.54867523936338 2.92375727469145 2.90085064070064 2.88435769417184 3.99637924323917 3.98262990999101 3.39285310527355 4.2755470490995 5.06416055878057 3.80285237116612 3.91411137433801 4.03715175324307 3.57802948800838 0.201065726519417 0.202284825483130 0.203375181068928 0.207964490773156 0.215414989728226 0.206689586076464 0.201339414734508 0.205685171086653 0.210562011647458 0.206183183357100 0.211506551995515 0.202104417313807 0.202782252834361 0.201734976450100 0.219942079300584 0.201065726519417 0.20899140628397 0.204008803500885 0.209044852955151 2 2|0 +|/ 9262065 9262501 9262269.4 9261539 9262705 + gene protein_coding_gene FALSE TRUE AT2G21640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05570.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39235.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05323.1); similar to Os03g0724500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051122.1) 0.869809243361707 9.27834642061257 1.68654902592932e-06 0.0256136200567885 9.692831154158 6.92722815836116 0.869809243361707 0.0777504569404638 AT1G68540_at 5.46768640908296 5.29643977599344 4.03164231344699 4.38605765990838 5.06280585347714 4.82230170885655 6.65936420007845 6.3760225656805 4.47329735243392 5.22924717729841 4.06398806268171 4.35684111227801 4.53252869897349 4.90744398447035 3.96737927253282 4.05895994000259 4.82703688023379 4.37216918376628 4.83822002563558 0.230062887419911 0.229203555890729 0.228004178588175 0.224805089492250 0.216362506559337 0.223393721207357 0.22141014704031 0.226350098570487 0.225944048440326 0.219854321281706 0.216362506559337 0.223982994103379 0.221198467792405 0.217258728046021 0.217460985979115 0.216362506559337 0.218591010979695 0.218947198531048 0.219424035752085 1 1 + 25724201 25724872 25724468.727 25723689 25725028 + gene protein_coding_gene FALSE TRUE AT1G68540.1 oxidoreductase family protein similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G25460.1); similar to dihydro-flavanoid reductase-like protein [Zea mays] (GB:AAK52955.1); similar to Os01g0127500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041904.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.917652240187579 -9.27326842051704 1.69557793135364e-06 0.0257490464655363 9.68942574394795 9.87914751597723 -0.917652240187579 0.0936832301662172 AT3G50340_at 5.51702990493523 5.65922087137708 4.93174544428395 5.21389490244853 6.00568774364619 6.21667886562397 4.90772989699473 4.99491033706965 5.84012883783688 4.81526979487818 6.7556047065474 7.6975158033001 6.9445667873535 6.73334143301326 8.24780955054426 7.33046642991615 6.71355400868447 6.40887990415182 6.5743780614432 0.184832552745396 0.181370478897504 0.195992303406508 0.182232945723066 0.189769869824997 0.193791320176465 0.188126564346659 0.200372874856031 0.199251406826726 0.189256929970963 0.181965772138565 0.187957663071757 0.186312850795550 0.183086720830505 0.206312409605279 0.183941584660017 0.200989209335798 0.185266403002050 0.187761066876035 3 3 - 18676315 18676887 18676605.091 18676076 18677654 - gene protein_coding_gene FALSE TRUE AT3G50340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67020.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09363.1) 0.841493708146303 9.27079750856871 1.69999021462813e-06 0.0258143514091281 9.68776768583744 11.8544753587932 0.841493708146303 0.0674567590896462 AT1G20696_at 10.4829621493926 10.3130869076562 10.7280397474032 10.4698673058281 10.8214411416888 10.6696739760517 9.82574431799665 9.72606879959484 8.99721881070975 9.13586510662484 10.0099711950330 10.0296559834336 10.2884835140198 10.3095468397229 9.97640383766016 10.1018141007347 10.224361281546 9.50745557463527 8.82578141438635 0.080517448099378 0.0788365051405275 0.0843891218554676 0.0837947467778724 0.0799374098218568 0.0848862200003174 0.0822160129161792 0.0805838748513714 0.0901754581886177 0.0824912155921169 0.0788365051405275 0.0801193561211668 0.0788365051405275 0.0826987184636992 0.0788365051405275 0.0789193517074977 0.0837661085253401 0.0788365051405275 0.0788365051405275 1 0|1 /|+ 7179990 7180681 7180304.286 7179442 7181489 + gene protein_coding_gene FALSE TRUE AT1G20696.1|AT1G20696.2|AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor|HMGB3 (HIGH MOBILITY GROUP B 3) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. similar to HMGB2 (HIGH MOBILITY GROUP B 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G20693.1); similar to high mobility group protein [Solanum tuberosum] (GB:CAA05365.1); contains InterPro domain High mobility group box HMG1 and HMG2; (InterPro:IPR000135); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071)|similar to HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis thaliana] (TAIR:AT1G20693.3); similar to high mobility group protein [Solanum tuberosum] (GB:CAA05365.1); contains InterPro domain High mobility group box HMG1 and HMG2; (InterPro:IPR000135); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.827481548012054 9.2627993583466 1.71435778890179e-06 0.0260308086666847 9.68239612315257 19.9007355355791 0.827481548012054 0.0620296787604854 AT3G17640_at 3.88654973702168 4.85369255245686 2.59474892736614 3.34448096728774 3.60984129052447 3.99959313849631 6.8584057408248 7.17080066637038 6.06413076452796 6.68453933951164 6.24519678204465 6.17068848533112 5.49576167310577 5.97344379713431 5.79923114452109 6.03103138180748 5.08384552322577 5.73192241747129 6.70169637433608 0.220818358471575 0.215967006281665 0.21751877832902 0.225388167417939 0.213392408563389 0.219792442411757 0.220682929076658 0.223374905567701 0.220813539893099 0.226591626081108 0.210646298485332 0.212526627546949 0.225129200859883 0.218256615061902 0.213283979936138 0.210646298485332 0.231358954138755 0.216439963079472 0.212445705760781 3 3 + 6033021 6033502 6033288 6032399 6033589 + gene protein_coding_gene FALSE TRUE AT3G17640.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G03440.1); similar to putative leucine-rich repeat family protein [Oryza sativa (japonica cultivar-group)] (GB:AAV59431.1); similar to Os05g0406800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055516.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.48613071773074 -9.2524972104919 1.73305799703147e-06 0.0263130195689289 9.67546692073357 10.6896869492296 -1.48613071773074 0.228730902952990 AT2G39190_at 6.70935738865665 6.6143237212965 6.51082575582255 6.63046034501153 7.53080842237391 7.45369229385683 7.73204774465398 7.12761027990335 4.4163462276974 4.08452243423918 5.33467434176803 5.5358216967038 6.44557973346972 6.27917877872588 6.81710235120534 5.94369653372934 6.0511370354076 5.84063133012119 3.75320659137336 0.219031817800805 0.216688546290523 0.21906723064243 0.210670447648011 0.207875528921661 0.210095373523860 0.212250983364613 0.209551780332411 0.227078012411835 0.213945144374918 0.214968400206835 0.209898323343077 0.218592951389808 0.212774801058208 0.215204153517360 0.210069822342306 0.217999417851296 0.221113671513828 0.212487942396975 2 2|0 +|/ 16358424 16359709 16359041.5 16357046 16363041 + gene protein_coding_gene FALSE TRUE AT2G39190.1|AT2G39190.2 ATATH8 (ABC2 homolog 8) member of ATH subfamily similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT1G71810.1); similar to Os02g0805800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048444.1); similar to putative ubiquinone biosynthesis protein ubiB [Oryza sativa (japonica cultivar-group)] (GB:BAD19381.1); similar to Putative ABC transporter [Oryza sativa] (GB:AAK98701.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147)|similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT3G24190.1); similar to Os02g0805800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048444.1); similar to putative ubiquinone biosynthesis protein ubiB [Oryza sativa (japonica cultivar-group)] (GB:BAD19381.1); similar to Putative ABC transporter [Oryza sativa] (GB:AAK98701.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.965948947338315 9.24758167082955 1.7420581966986e-06 0.0264479275422782 9.6721566576794 12.0964754820693 0.965948947338315 0.108712958942495 AT1G74590_at 6.8616857943272 7.57143623759508 8.27898204679975 7.68564169251376 5.57462977087684 5.2296961601018 1.27319298777928 1.61035595723249 1.31988832333442 1.31391982000303 1.4620641843784 1.39562551988640 1.82972177268743 1.81962639083779 1.71251550284384 1.74186610713113 1.91812805952784 1.33826200060599 1.85665806398193 0.339108107771681 0.312771807266976 0.312060799033223 0.316853328271539 0.321640248165354 0.320778246035665 0.288712458978132 0.295079452383064 0.290077041336482 0.293351980767386 0.292273562387313 0.29742047870514 0.292284068175467 0.292485211512817 0.302323260617653 0.291490373158342 0.314396565066367 0.298153059509555 0.288712458978132 1 1 - 28027551 28028172 28027837.727 28027288 28028387 - gene protein_coding_gene FALSE TRUE AT1G74590.1 ATGSTU10 (Arabidopsis thaliana Glutathione S-transferase (class tau) 10); glutathione transferase Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTU9 (GLUTATHIONE S-TRANSFERASE TAU 9), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G62480.1); similar to glutathione S-transferase 12 [Capsicum chinense] (GB:CAJ13709.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 1.25923689823521 9.2458457092756 1.74524875451477e-06 0.0264946213422888 9.67098698152653 7.08522671157518 1.25923689823521 0.180546408167895 AT1G71840_at 8.27681516438606 8.03832473627548 8.26384201459835 8.10344296236266 7.54462010623231 7.27351493281454 8.60042642098611 8.64210623265344 7.12119350687444 7.1783980587478 5.61576647233523 5.84976230917381 6.25995593730105 5.53396687531951 6.21761050438745 6.07504270491677 6.41632194359834 6.13185161855926 7.0130817145891 0.236448012084101 0.232619129538459 0.237799893212615 0.23373196551787 0.231853608882151 0.233321287285132 0.241298172084672 0.233577838854592 0.23498130041559 0.229668069317916 0.233199966053546 0.233114988976667 0.232849843406495 0.234787790473687 0.231918277165782 0.229420703081721 0.23256968790402 0.235825593045029 0.229274302461509 1 0|1 /|+ 27027354 27027961 27027801.556 27025880 27028213 + gene protein_coding_gene FALSE TRUE AT1G71840.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to putative an (GB:AAK14409.1); similar to Os03g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050927.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.842376382805748 -9.24417537502937 1.74832466053229e-06 0.0265395683468801 9.66986121357917 14.6512661825066 -0.842376382805748 0.0687531961974697 AT1G79260_at 3.83370773980919 3.80928165607269 2.94754995616613 3.41559758891963 3.18381581607784 2.76878638997716 5.09211633271825 5.44761958886929 3.52754076727977 4.01393988101859 3.18639239287352 3.30421852244458 2.97958040566537 3.16680599793196 3.20761773682392 3.27220453626166 3.43613422445948 3.00460300939566 3.78651225001586 0.214890370326713 0.206201564428053 0.211649199356122 0.200893267658614 0.206352055438167 0.204123923836645 0.227419543089380 0.212341048127220 0.203484219141656 0.210419635482906 0.202369039249408 0.19966903705459 0.199674578443946 0.204401432348113 0.19966903705459 0.199903765700895 0.207201135574677 0.200389062001982 0.202888304845334 1 1|0 +|/ 29818234 29818898 29818455.7 29818137 29819202 + gene protein_coding_gene FALSE TRUE AT1G79260.1 Identical to Uncharacterized protein At1g79260 [Arabidopsis Thaliana] (GB:O64527); similar to hypothetical protein MBP_91N22.4 [Musa balbisiana] (GB:ABF70108.1); contains domain FAMILY NOT NAMED (PTHR15854); contains domain gb def: YUP8H12R.14 protein (At1g79260/YUP8H12R_40) (PTHR15854:SF5) -1.02402346056077 -9.24380109324438 1.74901470084966e-06 0.0265482941441971 9.66960891419407 7.29765550157799 -1.02402346056077 0.124587004323677 AT4G22530_at 4.34772786183907 4.73430030722949 6.52206306991654 6.9057713195265 4.06142358505548 3.94310339899551 3.08083109643666 3.26120199581544 4.34697903338359 3.36312514592415 4.48421415278052 4.17622345592952 3.40931712886045 4.16063377821624 4.09060899267955 4.31264984170376 3.71608398731114 4.23071883954635 3.37455283826878 0.27448966819366 0.269866258836303 0.288507328074103 0.290887222953748 0.273476675456662 0.280509972889705 0.276668667240289 0.269866258836303 0.281324700535888 0.284237582386132 0.277312322724126 0.271431862328705 0.27305865411809 0.273716372949350 0.275845205578534 0.269866258836303 0.274840632567477 0.270221379799301 0.275950298206633 4 4 - 11859264 11859712 11859535.909 11859015 11860219 - gene protein_coding_gene FALSE TRUE AT4G22530.1 embryo-abundant protein-related similar to embryo-abundant protein-related [Arabidopsis thaliana] (TAIR:AT5G10830.1); similar to embryo-abundant protein EMB-like [Oryza sativa (japonica cultivar-group)] (GB:BAB89030.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) 0.939872813823138 9.24091669378721 1.75434238161615e-06 0.02662740866817 9.66766405718772 8.49077380167881 0.939872813823138 0.101381620306939 AT4G01870_at 5.06628851393414 5.41822011154592 7.66534659062716 7.75706626988611 4.27403975843169 4.91109978917915 4.70829780050433 4.38007988855705 3.63809040961598 3.84254080527303 4.35895763283632 4.74932548796378 4.03259697778191 4.60180401184355 4.40103080947873 4.95243600639637 4.68328340772623 4.75636775026436 3.51496719007576 0.259710297513226 0.249883071557117 0.265103627200171 0.277288469295449 0.242230085230278 0.246250731330961 0.249719181318663 0.25188431824541 0.256967497824805 0.248777434590628 0.25649242723581 0.242230085230278 0.242230085230278 0.254323698895377 0.257286599998613 0.242419069323124 0.24715161828828 0.253353980808885 0.251948986456169 4 4 - 808481 808934 808754.273 808376 810446 - gene protein_coding_gene FALSE TRUE AT4G01870.1 tolB protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21680.1); similar to putative protein [Gossypium hirsutum] (GB:AAT57937.1); similar to Os03g0840200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051846.1); similar to Os07g0638100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060406.1); contains InterPro domain TolB, C-terminal; (InterPro:IPR011042); contains InterPro domain WD40-like Beta Propeller; (InterPro:IPR011659) 1.08022115780524 9.23696682069674 1.76166655390542e-06 0.0267368132886226 9.66499930935409 9.63864220476219 1.08022115780524 0.139074035465276 AT4G34650_at 2.66951932057384 2.47556467784284 2.28759079858052 2.22849082093479 2.13578796147788 2.10091933811294 5.02256939226251 4.96160800011244 3.05211128064804 3.52410710003467 3.71626754351572 3.93153310255427 3.17496904957716 3.64419525282321 3.91591230410112 3.04922181021679 3.2845180554335 3.50757969839879 3.87975941002899 0.227799234764482 0.228724246085412 0.227438104384742 0.231313542176537 0.232562967603812 0.237616653105663 0.269040780729089 0.251523324344902 0.233411538000103 0.235399906135927 0.230219693953720 0.231019265420834 0.230957669889371 0.236867544016330 0.232764108621725 0.227438104384742 0.241108441165219 0.232631470139885 0.239149088719711 4 4 + 16543456 16544488 16543967.818 16542382 16545126 + gene protein_coding_gene FALSE TRUE AT4G34650.1 SQS2 (SQUALENE SYNTHASE 2); farnesyl-diphosphate farnesyltransferase squalene synthase, catalyzes the first committed step in sterol biosynthesis similar to SQS1 (SQUALENE SYNTHASE 1), farnesyl-diphosphate farnesyltransferase [Arabidopsis thaliana] (TAIR:AT4G34640.1); similar to squalene synthase [Glycine max] (GB:BAA22559.1); contains InterPro domain Squalene/phytoene synthase; (InterPro:IPR002060); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949); contains InterPro domain Farnesyl-diphosphate farnesyltransferase; (InterPro:IPR006449) -0.775709723040517 -9.22354057134998 1.78681085015932e-06 0.0271166414620178 9.65592863035464 6.49193155489462 -0.775709723040517 0.0371335643447479 AT3G21110_at 4.70094316160233 5.18618804071217 4.31036314784268 4.35010542047876 4.43323269395754 4.44966850778064 6.22632555356076 6.30830407046697 5.03836731364623 5.08637665728968 4.05129094542947 4.51737468499029 4.24345254683428 4.29858730184264 4.72037631071061 4.9067462426207 4.67874397484418 4.11638697343699 4.85731572182682 0.219502971633968 0.212164837882141 0.210057601015279 0.214970787659613 0.210057601015279 0.217148668749795 0.217807407737587 0.214261388694061 0.217161129771017 0.212781781276793 0.211938517431903 0.211673389975919 0.218286439863514 0.214602675503498 0.212130312440592 0.215241933697803 0.215210224199905 0.214728232736667 0.211522504081352 3 3|0 -|/ 7402715 7404141 7403575 7402487 7405647 - gene protein_coding_gene FALSE TRUE AT3G21110.1|AT3G21110.2 PUR7 (purin 7); phosphoribosylaminoimidazolesuccinocarboxamide synthase 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.|5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone. Identical to Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor (EC 6.3.2.6) (SAICAR synthetase) (PUR7) [Arabidopsis Thaliana] (GB:P38025;GB:Q8RXX4;GB:Q9LJC1); similar to SAICAR synthetase (GB:AAA16231.1); contains InterPro domain SAICAR synthetase; (InterPro:IPR001636) -0.885998894534793 -9.21084334443628 1.81094719907626e-06 0.0274811237459822 9.64733227781995 9.71346120963834 -0.885998894534793 0.0854884178724412 AT1G48210_at 7.5317465679031 7.40191643184127 7.02501171854845 7.67649106954034 6.06390354550255 5.87627722620718 2.66401637094418 2.54611313525174 3.27523387166526 2.48379679889424 2.79691933646816 3.13017551893439 2.84793574429052 2.84235680216458 3.32451216766094 3.0462432730266 3.86226255128168 3.56610833796709 2.61116896433365 0.218468820328332 0.222377431485305 0.231380514061961 0.232074525913344 0.216700582211268 0.217613006580285 0.222353424069428 0.216179217069628 0.214594617446274 0.220762325525765 0.213925688905455 0.209039902843959 0.209039902843959 0.222239539686612 0.212692655681103 0.209039902843959 0.220778554525543 0.216455521722146 0.211390247623301 1 1|0 +|/ 17804113 17805336 17804400.8 17802132 17805656 + gene protein_coding_gene FALSE TRUE AT1G48210.1|AT1G48210.2 serine/threonine protein kinase, putative similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17410.1); similar to Pto kinase interactor 1 [Lycopersicon esculentum] (GB:AAC61805.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.00573521748721 9.19455391281553 1.84242961320045e-06 0.0279570269507037 9.63627794304874 8.83174988893667 1.00573521748721 0.121185971101902 AT3G57770_at 4.57699223711276 4.37161894379528 4.94813358807974 5.15597454061498 6.39209401999914 6.05713957256469 4.7237580153421 4.48053843885637 3.03123133871987 3.24937394047662 3.66431243239056 3.04675529173834 4.02730820606879 3.9179207878957 3.23122808410170 3.36884592321803 5.22515271969742 3.55736941162251 2.94025862234012 0.298160699310889 0.299900752577176 0.298557489373859 0.295174259448718 0.314797743572365 0.301467276345752 0.302302261956530 0.302194538753885 0.304754691973357 0.295174259448718 0.295174259448718 0.29561496603096 0.295174259448718 0.295796635247857 0.298374603833008 0.295174259448718 0.299625996508727 0.295174259448718 0.295174259448718 3 3 + 21409091 21409488 21409333.222 21408519 21409830 + gene protein_coding_gene FALSE TRUE AT3G57770.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G57700.1); similar to OSJNba0093F12.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE03948.3); similar to Protein kinase; Type I EGF [Medicago truncatula] (GB:ABD28548.1); similar to Os04g0599000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053747.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.89067441405872 9.19030821277203 1.85073211227065e-06 0.0280811583394826 9.6333919220252 8.50252262334755 0.89067441405872 0.0876836227627854 AT3G43160_at 3.87802748366290 4.29432028638791 3.91990902974682 3.94165389404602 2.68939818247228 2.87063086052014 3.69454114590716 3.95258015554095 4.49558908294985 4.07649496203376 2.97130714211249 3.18841862468794 3.00198964133718 3.60689716631668 2.91267906710441 3.39480298507069 2.57365820471843 2.68901495479260 4.15116969660065 0.279417777378576 0.292964213313833 0.27573549161346 0.281024184773309 0.278015898505445 0.282104403159384 0.2845738265837 0.283572467205137 0.281916400747518 0.283110175179805 0.292635116582497 0.284386015521569 0.284329877168847 0.27573549161346 0.278727004500315 0.282079044701807 0.286375558811327 0.281433416113311 0.279528031878128 3 3|0 +|/ 15178006 15179189 15178675.778 15177549 15179213 + gene protein_coding_gene FALSE TRUE AT3G43160.1 MEE38 (maternal effect embryo arrest 38) -0.899103941719473 -9.18898460770653 1.85332869679509e-06 0.0281187029877751 9.63249179279715 7.29684790668334 -0.899103941719473 0.0904534645881815 AT4G18270_at 5.75180046258176 5.71149987658422 6.54954995900146 6.24718548319128 7.06184522825933 6.47442902227343 7.00911353235102 6.74626110895742 4.69429215035336 5.56727921789468 7.23631807944696 7.58678837357226 7.57812617263198 7.76681978226264 6.75538699825971 6.41488310930798 6.52167996679582 6.55951404883551 5.65546851187948 0.22765121722824 0.227294651925462 0.227809866709797 0.225283410322836 0.224006803192701 0.234108385332239 0.227852576495425 0.226431495778303 0.253998914094496 0.226154262269994 0.227920059073753 0.225936331506823 0.224006803192701 0.242619067689524 0.226925273542853 0.230044392769064 0.239622664735893 0.226773116229435 0.231117013744046 4 4 - 10099412 10100755 10099924.727 10099375 10101908 - gene protein_coding_gene FALSE TRUE AT4G18270.1 ATTRANS11 (Arabidopsis thaliana translocase 11); catalytic Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development. similar to Phospho-N-acetylmuramoyl-pentapeptide-transferase homolog (Translocase I) (GB:O49730); contains InterPro domain Glycosyl transferase, family 4; (InterPro:IPR000715) 1.01267164220469 9.1871830651429 1.85686920730671e-06 0.0281705627440500 9.6312663272428 12.6230203473658 1.01267164220469 0.123245737159297 AT3G10080_at 5.63744434681451 6.43241974019969 3.19740437706481 3.15114593665641 3.59652201820318 3.78556737030344 6.99230614429682 7.71508916179268 6.28844049561448 6.123052193817 6.71148326128092 7.908509373783 5.97365006380072 7.0352280559644 8.04305775879395 6.70115205909413 6.17008654635533 6.9463924437982 6.34302773246579 0.219985696691259 0.215815863402258 0.244579715942737 0.230524563431995 0.214460278073973 0.235099056579338 0.212709867324415 0.216534978142564 0.216856755591334 0.216398218268968 0.216134852186987 0.211430882047769 0.211430882047769 0.218895969019405 0.219807128989095 0.216640028320866 0.213945926916596 0.216008089320109 0.215555486824552 3 3 - 3107488 3108049 3107787.182 3107280 3108182 - gene protein_coding_gene FALSE TRUE AT3G10080.1 germin-like protein, putative Identical to Germin-like protein subfamily 3 member 2 precursor [Arabidopsis Thaliana] (GB:Q9SR72); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT1G18980.1); similar to Os03g0804700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051622.1); similar to germin-like protein [Physcomitrella patens subsp. patens] (GB:BAD86499.1); similar to Os02g0532500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047025.1); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) -1.28848339232961 -9.18191860963396 1.86725723880905e-06 0.0283262923127333 9.62768322597615 11.6573382632454 -1.28848339232961 0.18896104565542 AT2G12400_at 7.01656303392437 7.00817774979827 8.02621378312212 7.73801531499972 8.40569325483863 8.20995063961512 7.88603581624606 7.62541482917409 7.19158485377635 7.10043662995337 8.47713425640446 7.83782493919585 8.54550946560735 8.20465237205922 8.21673954572684 7.71229169031733 8.31694071091612 8.47066404984542 7.39081570731899 0.157513534506739 0.160444956399483 0.160130167192947 0.158611785132657 0.166115649795284 0.165110174455959 0.159404912001657 0.161873360358777 0.186647382089480 0.170557198267564 0.153306177769626 0.156578638895989 0.154985187150198 0.155250027101343 0.165708129945168 0.157193091316757 0.163489593238459 0.163558785908341 0.168375144658398 2 2 - 5012226 5012805 5012503.727 5012025 5015404 - gene protein_coding_gene FALSE TRUE AT2G12400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25270.1); similar to H0306F03.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68245.1); similar to Os04g0644000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054054.1); similar to Os02g0799300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048408.1) 0.853013811300517 9.17120479624251 1.88859274494236e-06 0.0286480633480307 9.62038171216721 15.4646740656024 0.853013811300517 0.0753070470683448 AT1G63830_at 8.75864601337534 8.54366518241762 9.20143249423634 9.05579765576838 9.34547075132274 8.71831885401049 7.83979598461461 7.58671274341159 7.46641859315049 7.15015966401116 8.52245264099433 8.61759902821329 8.12524938579556 8.51411261177533 8.21507357925747 7.99698389313584 8.38041199728976 8.11303298831114 6.90178192135839 0.167582121218761 0.167305187976987 0.165039034416069 0.163045781735454 0.163045781735454 0.164930584552851 0.164524097484346 0.1703327142237 0.177397209775654 0.172528830937191 0.167146117499412 0.165980156898749 0.169242711734933 0.169291261996939 0.173577912904963 0.163045781735454 0.172368088516649 0.167957813108827 0.187432454152489 1 1|0 +|/ 23689449 23690644 23690172.778 23688862 23690985 + gene protein_coding_gene FALSE TRUE AT1G63830.1|AT1G63830.2 proline-rich family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41390.1); similar to Os10g0535800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065166.1); similar to Os03g0123600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048806.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN74842.1); contains InterPro domain Protein of unknown function Cys-rich; (InterPro:IPR006461) 1.01793887365147 9.16220332604377 1.90672208947379e-06 0.0289211606531385 9.614237344182 16.3729305807796 1.01793887365147 0.125365759370467 AT3G62390_at 3.75268422944302 3.88316058754122 2.79472204102256 2.32943039737186 3.08048615028468 3.09455103671174 5.22949139853589 4.70012180824143 4.79265419983989 5.70565111554346 5.41278398467247 5.95923018430386 4.71253351279296 4.42040721868672 5.77586814126677 4.93776873141054 4.57254912910297 4.40931104157825 5.95354388150956 0.239156341856074 0.231190207385492 0.242347805368490 0.237657603558663 0.227530054571435 0.226985095018742 0.235244437327845 0.239566608333116 0.235095800176321 0.235839762056681 0.226053180817642 0.231764230553855 0.230986787050418 0.228705138707877 0.226053180817642 0.227553591780946 0.230529787742241 0.226053180817642 0.226550835685907 3 3|0 -|/ 23098252 23098942 23098498.4 23097992 23100182 - gene protein_coding_gene FALSE TRUE AT3G62390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12060.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95542.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -1.01273016945675 -9.15973375533194 1.91172873979450e-06 0.0289951897964632 9.61255005476294 8.86258406878128 -1.01273016945675 0.124063463945388 AT1G13650_at 8.6922035763903 8.96319266739046 8.9997004807023 8.83025427043252 8.73195278682283 8.65705649960246 11.6294066034008 11.4535730345858 10.9081831511943 11.3223104147552 10.6464545148318 10.9624262554885 10.1814877206514 10.8822576729093 10.6949910329049 11.5277373481698 10.9335634460641 10.4497982115085 10.9284113442434 0.0975231645496855 0.0929104806826267 0.105294562871118 0.104932026113064 0.096563827166267 0.0984518358644812 0.0933289520469836 0.0960024975694612 0.106626975831359 0.0938980356959104 0.0933462360746438 0.0938027451959223 0.0947700975523908 0.095591219767565 0.0968633859398527 0.0925121417853764 0.101086481905877 0.101606063090258 0.0943008233835784 1 1|0 -|/ 4680569 4681215 4680917.8 4680429 4682193 - gene protein_coding_gene FALSE TRUE AT1G13650.1|AT1G13650.2 similar to 18S pre-ribosomal assembly protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G03810.3); similar to hypothetical protein [Trypanosoma cruzi strain CL Brener] (GB:XP_813437.1) -0.823990869566685 -9.15954051192051 1.91212110836734e-06 0.028999228729499 9.61241799616403 20.4135714042728 -0.823990869566685 0.0644437545227012 AT1G12330_at 5.26892814786064 5.29946791474848 4.53663151693511 4.44712543728505 5.86603771059787 5.60833442003778 6.02373540197935 6.13821658665259 6.93584512066525 6.69466238236882 6.38484273464886 6.48148850520437 5.7496629643331 5.95132516728667 5.22425367662663 6.09882606022674 4.47170852793503 6.35589428640469 6.95272110984436 0.224564469735206 0.212281529924595 0.219781869946945 0.223138136509378 0.209467443919843 0.228614736697936 0.211969139892835 0.213480588405046 0.215324740783403 0.209467443919843 0.213519635982514 0.213384927929529 0.212210626621457 0.213732457842561 0.211305238653053 0.210391125195596 0.24169690998913 0.213174956720592 0.214741425427454 1 1 + 4196333 4196597 4196449.5 4194656 4196747 + gene protein_coding_gene FALSE TRUE AT1G12330.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12900.1); similar to Peptidase M14, carboxypeptidase A [Medicago truncatula] (GB:ABE94280.1); contains domain TNF receptor-like (SSF57586) -0.79469035277793 -9.15193783455559 1.92762717440441e-06 0.0292324660998428 9.60721919236683 11.7489728643251 -0.79469035277793 0.0514705834158911 AT4G10030_at 5.24967675300282 5.31459109299279 3.80496237250008 4.08056811603407 5.03600161779044 4.83251182297613 6.7954839894419 6.26829959489325 6.58349377167891 6.66892493127476 6.65348090754699 6.84977847390229 5.4978917335481 6.75876087301429 6.00124562677464 6.00623752747972 5.1549689386805 6.46319682400688 6.59285558583743 0.221129575625728 0.221005486552683 0.240695578447793 0.224189996005398 0.223444376791569 0.235963831046113 0.228903218279593 0.219563222303204 0.238724962425980 0.223552503221891 0.233466182648697 0.232352068950532 0.219219259614216 0.226988461947350 0.219450577868032 0.222367963627196 0.244681751263650 0.223503820823799 0.224492940681637 4 4|0 -|/ 6270487 6271594 6270828.222 6270238 6273241 - gene protein_coding_gene FALSE TRUE AT4G10030.1 hydrolase, alpha/beta fold family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52570.1); similar to Os01g0885600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045025.1); similar to Predicted alpha/beta hydrolase (ISS) [Ostreococcus tauri] (GB:CAL55286.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) -0.955199095867682 -9.122288363783 1.98941053195512e-06 0.0301674213065674 9.58688308891402 11.5669051913120 -0.955199095867682 0.109381483359346 AT1G13250_at 4.73637618630224 4.87107521049711 2.45963093924249 2.66682966711648 3.38731675384411 3.64433269287982 5.40707811320244 5.88282122983245 5.72127965583009 5.16651255041887 6.06942508020562 7.31101715231437 5.46001992805654 5.71885996597808 6.57206302032588 5.2960269802717 4.42313122608472 6.01833779326347 5.72145476178334 0.233122166319358 0.230199399466067 0.239292617483241 0.236116360363277 0.229387408066524 0.226918101998135 0.227272084944935 0.233552448433683 0.224793286338437 0.239070094276434 0.228509662538832 0.235327507707852 0.226802855563257 0.234224715509212 0.230050299323344 0.226588652790747 0.226805803888362 0.228297450229043 0.230621184575459 1 1 - 4528963 4529478 4529203.091 4528620 4530060 - gene protein_coding_gene FALSE TRUE AT1G13250.1 GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. similar to GATL4 (Galacturonosyltransferase-like 4), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G06260.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96888.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) -0.93130784219303 -9.10711757039183 2.0218484503154e-06 0.0306572880521324 9.57643974701989 9.8294454987763 -0.93130784219303 0.102885887280131 AT1G06460_at 11.8433592742686 11.8873809880117 12.2109013512501 12.1721396405574 12.4109275511433 12.3335413572083 11.5229388082939 11.3797321721721 10.8764150242497 11.2017168505087 11.8998851021072 11.6154205843474 11.9154972798795 12.0199521455383 11.6842761891884 11.7891886841375 11.9424334900489 11.8200484032204 10.7654853096908 0.0672530142470877 0.063841946640619 0.0680577607378923 0.065696893317583 0.0677613483645031 0.0656350777513637 0.0689483146649301 0.0682352343871625 0.0754904718617208 0.0642434187887964 0.0655031736006628 0.065582177142666 0.0640702963420575 0.0671811575043098 0.0658794775467558 0.0654045101814198 0.0784871793013277 0.0675245033797463 0.067800563220915 1 1 - 1967645 1968561 1968212 1967086 1969560 - gene protein_coding_gene FALSE TRUE AT1G06460.1 ACD32.1 (ALPHA-CRYSTALLIN DOMAIN 31.2) ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins. similar to AT-HSP17.6A (Arabidopsis thaliana heat shock protein 17.6A) [Arabidopsis thaliana] (TAIR:AT5G12030.1); similar to low molecular weight heat shock protein (Hsp17)-like [Blastopirellula marina DSM 3645] (GB:ZP_01091157.1); similar to Small heat shock protein [Rickettsia felis URRWXCal2] (GB:YP_247467.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.755745002172622 9.10095225987345 2.0351940153234e-06 0.0308576116603334 9.57218828120876 23.3619702076756 0.755745002172622 0.0299425304178407 AT1G05300_at 6.47525984628433 7.0466828101173 6.3904670692708 6.98953023876729 8.47572511283296 8.28498112291182 4.08394200178276 3.93511892803746 3.45031699761005 2.67090805440768 2.58441798072249 2.33424025230175 2.89887247844153 3.01170003473341 1.91447979243386 3.70390338019797 4.81220277173211 2.32327643441133 2.56021440593775 0.338950301708379 0.345241144380186 0.332730293635968 0.333693934661539 0.336970977749786 0.328125879523993 0.328934611061975 0.328125879523993 0.333149062467797 0.328125879523993 0.328125879523993 0.328125879523993 0.330074989012487 0.328125879523993 0.338020717401253 0.333269467400973 0.330432031634947 0.344118498300355 0.332151821743883 1 1 - 1545300 1547199 1546085.4 1545105 1547848 - gene protein_coding_gene FALSE TRUE AT1G05300.1|AT1G05300.2 ZIP5 (ZINC TRANSPORTER 5 PRECURSOR); cation transporter member of Fe(II) transporter isolog family Identical to Zinc transporter 5 precursor (ZRT/IRT-like protein 5) (ZIP5) [Arabidopsis Thaliana] (GB:O23039;GB:Q6ICX1); similar to ZIP3 (ZINC TRANSPORTER 3 PRECURSOR), zinc ion transporter [Arabidopsis thaliana] (TAIR:AT2G32270.1); similar to hypothetical protein [Thlaspi caerulescens] (GB:CAI77926.2); contains InterPro domain Zinc/iron permease, fungi and plants; (InterPro:IPR004698); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689)|Identical to Zinc transporter 5 precursor (ZRT/IRT-like protein 5) (ZIP5) [Arabidopsis Thaliana] (GB:O23039;GB:Q6ICX1); similar to ZIP3 (ZINC TRANSPORTER 3 PRECURSOR), zinc ion transporter [Arabidopsis thaliana] (TAIR:AT2G32270.1); similar to putative Zn transporter [Thlaspi caerulescens] (GB:CAI77925.2); contains InterPro domain Zinc/iron permease, fungi and plants; (InterPro:IPR004698); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) 1.10199923868012 9.07183047001842 2.09953194174857e-06 0.03183100376885 9.5520488516196 9.3810632878874 1.10199923868012 0.149262277103128 AT4G08390_at 8.03894978086872 8.26969752196283 8.2925575573019 8.47193473835557 5.68387213957821 5.52793492172734 9.07534006465276 9.2087843644114 5.84246687115263 7.5265803464949 6.69939073125807 6.77784034182206 6.52167749415238 6.62876759019504 7.09692896481784 6.12245728588262 6.57844905487101 7.19709878937454 6.63618132718577 0.234569775049735 0.236326117875515 0.233990333029315 0.247667905818546 0.229913755554365 0.238023193172665 0.244891620828741 0.245678941293923 0.243656084776777 0.228551434328838 0.243109247612288 0.228551434328838 0.231496988592434 0.228551434328838 0.231242060234578 0.231672114602432 0.230146555962497 0.228551434328838 0.228551434328838 4 4|0 +|/ 5315886 5316805 5316421.222 5314902 5317453 + gene protein_coding_gene FALSE TRUE AT4G08390.1|AT4G08390.2|AT4G08390.3 SAPX; L-ascorbate peroxidase|SAPX Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. Identical to L-ascorbate peroxidase S, chloroplast/mitochondrial precursor (EC 1.11.1.11) (Stromal ascorbate peroxidase) (sAPX) (AtAPx05) (APXS) [Arabidopsis Thaliana] (GB:Q42592;GB:Q9STM9); similar to TAPX, L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT1G77490.1); similar to stromal ascorbate peroxidase [Brassica oleracea] (GB:BAD14932.1); contains InterPro domain Plant ascorbate peroxidase; (InterPro:IPR002207); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) -0.809850663565458 -9.07128944005955 2.10074783261438e-06 0.0318473371424341 9.55167379511898 14.5067517843529 -0.809850663565458 0.0618036549272198 AT2G30500_at 6.70113829898135 6.62478573748878 4.81974116822499 5.02750260329039 6.00413631753876 6.08293200529737 5.85424489067023 5.80975530126828 5.65410480504511 6.67751078495583 5.88140590853545 6.73033084834553 6.00793699015508 5.33146751038372 6.05372205351174 5.85046230807568 4.76919643861875 5.43411072745931 7.26027748551205 0.200244199245711 0.198451739828922 0.194384430596392 0.193019081848099 0.197599625926210 0.205636210520906 0.192309000112649 0.191899111938918 0.206455189745557 0.193807974796384 0.195898512892753 0.195735922300882 0.19628937319414 0.195492711565521 0.195710324248929 0.190300870752595 0.196424386110454 0.190540549233492 0.196691164837319 2 2 - 13005406 13005879 13005634.091 13005236 13007179 - gene protein_coding_gene FALSE TRUE AT2G30500.1 kinase interacting family protein similar to kinase interacting protein-related [Arabidopsis thaliana] (TAIR:AT5G58320.2); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE94140.1); contains InterPro domain KIP1-like; (InterPro:IPR011684) -0.768602480274813 -9.06082008812742 2.12442677140588e-06 0.0322041854277417 9.54440966181556 12.0095096019983 -0.768602480274813 0.0413823644156035 AT4G16563_at 1.65939945174861 1.64539731202045 1.98968400615889 2.04013524170643 1.96344886146851 2.1859773924461 1.95079128923777 1.48611464349298 1.83741718094388 1.50758188304979 4.93605736842169 2.2937294646879 2.79788640634778 4.05450931260393 1.7952252155188 2.28505006039875 2.47954808522648 2.55652209331453 1.13053874922362 0.216909097003987 0.219696338780825 0.215709150641053 0.217048468373459 0.223030870861128 0.219379548245528 0.219734024024441 0.225030708835912 0.229689303859417 0.215277292479362 0.225386667886867 0.216417522470463 0.222515805999337 0.224491293974104 0.222083655009505 0.218731423188554 0.224175327495480 0.218445790968057 0.215277292479362 4 4 - 9329962 9330524 9330282.364 9329679 9331545 - gene protein_coding_gene FALSE TRUE AT4G16563.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G45120.1); similar to Peptidase aspartic, active site [Medicago truncatula] (GB:ABE80893.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.88367788219796 9.05749387324136 2.13201006849528e-06 0.0323170086182515 9.54209918746649 4.06094949406201 0.88367788219796 0.0896190472188691 AT1G69840_at 9.64534131202664 9.84154415211327 11.0324796867578 11.0763971428648 10.2121935866888 10.2595947630181 9.20127931232885 9.50842157995854 9.21988716557273 8.5690318021168 9.40691311600255 8.74022223843591 9.4469234423563 9.31974568980605 9.11161126047563 9.52274925917385 9.48855590902168 9.20142357884852 8.45606267577639 0.0974689749417604 0.0998192322699368 0.103107355217372 0.102537356688878 0.100724799413399 0.0976678656708732 0.0977300301185857 0.102869359561214 0.109532913140212 0.107931300611068 0.0993430292173169 0.0976305333009154 0.0952259381717748 0.101318569867296 0.100761582602159 0.0980728241656091 0.103075345028119 0.103567442458772 0.0997741563279887 1 0|1 /|- 26297609 26298289 26297820.889 26297327 26299497 - gene protein_coding_gene FALSE TRUE AT1G69840.1|AT1G69840.2|AT1G69840.3|AT1G69840.4|AT1G69840.5|AT1G69840.6 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to hypersensitive-induced response protein [Cucumis sativus] (GB:AAQ72788.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 0.813730276500992 9.05575353809341 2.13598944080923e-06 0.0323751919543454 9.5408898080834 19.1112040800965 0.813730276500992 0.0640553700737064 AT1G13880_at 6.47857805653863 6.65196122121737 7.27855164500519 7.48707719832712 8.14044457436427 7.58949681657407 6.6328604488109 6.55388102893089 5.96640886026555 6.16783657330863 7.64284266293362 7.05593527216499 7.23874000880313 7.2856304105651 6.68086265861176 7.02691952407601 7.07648281741126 6.40946333189157 6.51447591913481 0.187173634067960 0.187179451539237 0.196556749347091 0.193151918580832 0.190202818993326 0.214266551718622 0.189989787690905 0.191335876868157 0.206094815871742 0.193266027894631 0.191063820002025 0.188736360726268 0.195472252717149 0.197571454465131 0.190349036587542 0.190750315335777 0.196675969978585 0.192204377245775 0.189039938495783 1 1 + 4750436 4750930 4750721.636 4748870 4751209 + gene protein_coding_gene FALSE TRUE AT1G13880.1 ELM2 domain-containing protein similar to myb family transcription factor / ELM2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G03470.2); similar to Os03g0425800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050406.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAS07212.1); contains InterPro domain ELM2; (InterPro:IPR000949) 0.94022075229870 9.05307422518084 2.14213154096087e-06 0.032466145634803 9.53902725308758 13.7357813920761 0.94022075229870 0.107143872325733 AT1G27630_at 8.96964794613689 8.76148819829834 8.58901610053274 8.39740915304335 9.68398655786322 8.52213410721582 7.34521066286678 7.05361691449963 5.86005180394345 5.5893790496981 7.45552647871592 7.61454098115707 8.04444332480943 7.85026144362065 7.49518336168061 7.2709117479783 7.58139893556587 7.72050570481333 5.46431827987666 0.221597055283875 0.226685298619952 0.220875083917754 0.219159030585208 0.219103969114518 0.230136182028005 0.224211914169312 0.214385095082925 0.227530816178728 0.227221089902279 0.213388030731732 0.213388030731732 0.214140243191602 0.218729635353803 0.213388030731732 0.213388030731732 0.241579620153434 0.224045116459053 0.240101450431953 1 1 + 9612956 9613863 9613313.091 9611090 9614321 + gene protein_coding_gene FALSE TRUE AT1G27630.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G45190.1); similar to Os12g0485400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066781.1); similar to Cyclin, N-terminal domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92940.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 1.37841283433331 9.04103647447885 2.16996361992650e-06 0.0328857986599862 9.53064905613612 15.0488201426231 1.37841283433331 0.213002927786073 AT1G20160_at 6.77702137613331 6.90415653457411 8.49685769792566 8.66795393332016 9.08936137522875 9.01311742522886 8.59347954661028 8.62489439444738 7.22856790493473 7.52174648190305 8.01095245360699 8.72183871976384 7.96259736145044 8.61487818511991 8.73018276590027 8.29697562148138 8.5402925686193 6.6900282460367 8.53562740391838 0.213009312424311 0.220124330350507 0.205849755364324 0.202602010435079 0.208093170333326 0.205834598432747 0.209051915342229 0.201296256444539 0.232694505374400 0.210299366962467 0.207317141656800 0.208057387410490 0.201540219612805 0.208783296601677 0.208985317385492 0.209124808557533 0.206340817554588 0.222063611790908 0.207916699444608 1 1 - 6990905 6991355 6991159.909 6990775 6993963 - gene protein_coding_gene FALSE TRUE AT1G20160.1|AT1G20160.2 subtilase family protein|subtilase similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G20150.1); similar to subtilisin-like protein [Glycine max] (GB:AAK53589.1); similar to subtilisin-type protease precursor [Glycine max] (GB:AAK53065.1); similar to subtilisin-type protease precursor [Glycine max] (GB:AAG38994.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020)|similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G20150.1); similar to subtilisin-like protein [Glycine max] (GB:AAK53589.1); similar to subtilisin-type protease precursor [Glycine max] (GB:AAK53065.1); similar to subtilisin-type protease precursor [Glycine max] (GB:AAG38994.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259) 0.762961144156612 9.02853678991208 2.19927789380449e-06 0.0333278572027132 9.52193198696192 16.2498297040166 0.762961144156612 0.0395524764429188 AT3G44735_at 5.16917519559799 5.7258331730812 6.30109845675586 6.62038005517944 7.36919924166154 6.99126843391972 7.8190982445742 7.44703739503393 6.38116416127514 6.69723090760419 9.87389882740986 8.9426298904225 9.06404442708006 9.32526457142715 8.07577946401806 8.34020100655924 7.82569259764718 7.97800332888844 7.34485080442599 0.238862761915448 0.227392299227889 0.239250169428406 0.236903126573761 0.226961595737208 0.232447045024645 0.224183487829278 0.228231444486578 0.241881505268773 0.246421738092335 0.233000856296771 0.228662610458333 0.237772627730434 0.232303267180354 0.238034112079231 0.225622006479925 0.227300265563093 0.244718756446571 0.241654383661099 3 3|0 -|/ 16302379 16303079 16302760.5 16302181 16303139 - gene protein_coding_gene FALSE TRUE AT3G44735.1 PSK1 (PHYTOSULFOKINE 3 PRECURSOR); growth factor Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Identical to Putative phytosulfokines 6 precursor (AtPSK6) (AtPSK3_2) [Contains: Phytosulfokine-alpha-like (PSK-alpha-like) (Phytosulfokine-a-like); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] (PSK6) [Arabidopsis Thaliana] (GB:Q8LA14;GB:Q7PCC2;GB:Q8W5Q9); similar to TPA: TPA_exp: putative phytosulfokine peptide precursor [Glycine max] (GB:DAA00281.1); contains InterPro domain Phytosulfokine; (InterPro:IPR009438) 1.07532059227688 9.0251021120088 2.20740767127105e-06 0.0334488484427703 9.51953359615082 14.4233552187838 1.07532059227688 0.144069417433068 AT1G48480_at 2.73093899257745 2.72715504014854 1.58554703186921 1.85051683762196 1.32572516260278 1.71252389201403 2.72225751786952 2.99395680436775 5.36203325325834 4.29535550426023 5.81861827582107 5.93145437289638 4.22101059205982 4.77380285812149 5.68205431940197 3.74688957411909 1.89362484206558 4.38953344604935 5.84723318066556 0.266624650859132 0.268166906803980 0.294313770095736 0.294313099784355 0.286267172477618 0.293865397097282 0.268669809022754 0.267623705584024 0.28056156726375 0.273726223773644 0.276605900197649 0.272107348847522 0.268258423402349 0.27799139691825 0.279384401453784 0.265732001760842 0.276340743724982 0.265732001760842 0.271946257704279 1 1 + 17923889 17924367 17924052.455 17922059 17924653 + gene protein_coding_gene FALSE TRUE AT1G48480.1 RKL1 (Receptor-like kinase 1); ATP binding / kinase/ protein serine/threonine kinase Arabidopsis thaliana receptor-like protein kinase (RKL1) gene similar to RLK902 (receptor-like kinase 902), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT3G17840.1); similar to putative receptor kinase [Oryza sativa] (GB:AAK18840.1); similar to Os03g0223000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049422.1); similar to Putative leucine-rich repeat transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAN05336.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.89304131768751 -9.02153901359266 2.21587575536384e-06 0.0335749494452729 9.51704411507672 7.06874308378135 -0.89304131768751 0.0937785563392721 AT3G08690_at 8.67391171975265 8.8584409551476 9.53061192085002 9.47670731648869 9.4346890031955 9.49091572659233 8.19925867266439 8.60869013935786 7.53220382992133 7.91264590608736 8.6059101543012 8.21235418315066 8.78240999070527 8.35372338175608 8.1265321895186 8.77739418334924 8.87784354857406 8.3137874622026 7.68175041526518 0.146655717604453 0.146671105561619 0.148834187157679 0.154852823667723 0.149674135574277 0.154744536936201 0.155452519778008 0.145969265487419 0.15954308354884 0.154173088861162 0.150744655497004 0.154062445197127 0.150570043828325 0.162602810785056 0.150342848551024 0.146314372672168 0.163569970026486 0.147416690791591 0.159110018422972 3 3|0 +|/ 2641513 2642440 2641972.333 2641062 2642694 + gene protein_coding_gene FALSE TRUE AT3G08690.1 UBC11 (ubiquitin-conjugating enzyme 11); ubiquitin-protein ligase Identical to Ubiquitin-conjugating enzyme E2-17 kDa 11 (EC 6.3.2.19) (Ubiquitin- protein ligase 11) (Ubiquitin carrier protein 11) (UBC11) [Arabidopsis Thaliana] (GB:P35134;GB:Q9M9J1); similar to UBC10 (ubiquitin-conjugating enzyme 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to ubiquitin conjugating enzyme [Zea mays] (GB:AAB88617.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.847766644827217 9.00999547727806 2.24355222614469e-06 0.0339920597783182 9.5089689137979 17.1417087336491 0.847766644827217 0.0788780643131526 AT1G30900_at 9.55177017785212 9.68265702071352 10.5088495605120 10.4616242828667 8.71746852412297 8.62181361000264 4.50970302146632 4.83510212543378 7.28450183659672 4.23925045193057 4.07699624089458 4.85065732396828 4.08580966791718 4.89092949461375 4.07039137815656 4.5205482810144 4.48492210788453 5.37511877404481 4.56411753245481 0.23771669521231 0.232160657468237 0.234937360776239 0.236434750526387 0.229081220930261 0.234929162599663 0.231796509612358 0.232320283373751 0.233940201675333 0.228844581505337 0.231887336817912 0.236682325117080 0.235051665278060 0.246327589337595 0.229475679144787 0.231585507575247 0.245344060901448 0.234038063191023 0.232817818685845 1 1|0 +|/ 10999503 11000460 11000033.556 10997256 11000524 + gene protein_coding_gene FALSE TRUE AT1G30900.1 vacuolar sorting receptor, putative Identical to Vacuolar sorting receptor 6 precursor (AtVSR6) (Epidermal growth factor receptor-like protein 6) (AtELP6) (BP80-like protein d) (AtBP80d) (VSR6) [Arabidopsis Thaliana] (GB:Q9FYH7); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT4G20110.1); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G34940.1); similar to Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) (GB:P93484); similar to Putative vacuolar sorting receptor protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05373.1); similar to Vacuolar sorting receptor 6 precursor (AtVSR6) (Epidermal growth factor receptor-like protein 6) (AtELP6) (BP80-like protein d) (AtBP80d) (GB:Q9FYH7); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain EGF-like calcium-binding; (InterPro:IPR001881); contains InterPro domain Aspartic acid and asparagine hydroxylation site; (InterPro:IPR000152) 0.807214646455341 8.9992791494488 2.26958004953114e-06 0.0343841377503968 9.50145879979661 13.3146460064825 0.807214646455341 0.0634419511435655 AT1G60230_at 3.85267808053238 4.12668350382167 2.72842012274867 2.94937689899423 3.50257516501607 3.49727526420748 4.25165793620161 4.42343162274783 4.54125411459484 4.66669664313924 4.06294849293959 3.99116945691771 3.53380182488988 4.15640549409726 4.14552327027163 4.05320123501993 3.95249899001572 3.7578443289079 4.58530588669258 0.266359624601366 0.270073524832689 0.285010074945523 0.269969042111625 0.267268337924117 0.274050905498657 0.268311446839586 0.277274233595958 0.277554518563974 0.263949052280694 0.264998825134973 0.260264536681233 0.266674109002616 0.260240730767886 0.26663467540217 0.268284348344450 0.265838152484602 0.263934304558516 0.266150543623660 1 1 - 22215896 22216605 22216286.727 22215749 22218089 - gene protein_coding_gene FALSE TRUE AT1G60230.1 radical SAM domain-containing protein similar to radical SAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19630.1); similar to Os01g0640800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043681.1); similar to florfenicol resistance protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD68852.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Conserved hypothetical protein 48; (InterPro:IPR004383) -0.817639500630349 -8.99903455075446 2.27017792743849e-06 0.0343909254227656 9.50128722965388 7.94372550000441 -0.817639500630349 0.0677868962597373 AT4G25710_at 3.46451941491716 3.74205422476727 4.21372929550682 4.37780135470404 4.35353327498998 4.70713525917155 3.29786406864299 2.90266129324874 3.41081494807571 4.08357344995692 4.5967750532554 4.66630774584279 4.40874956894227 4.72271681249255 4.22855669354109 4.80187103334073 4.74180223207854 4.41321310634573 3.80339624849125 0.245482580429031 0.246532854490388 0.253350349394745 0.245958257043491 0.243632108276789 0.263213129924651 0.251280538339314 0.245619096747400 0.24238935660311 0.244670105614777 0.241868533279681 0.241568145139976 0.241989404883391 0.241568145139976 0.247006798595459 0.247754866131497 0.248210502098459 0.251867551875422 0.253453685006104 4 4 - 13098374 13098913 13098623.636 13098150 13099540 - gene protein_coding_gene FALSE TRUE AT4G25710.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G51250.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.933922930460492 8.98400699745068 2.30723862553647e-06 0.0349500506996265 9.49073327168194 8.05162589636249 0.933922930460492 0.107400575317051 AT3G02250_at 5.75160458994273 5.85150889194903 4.5218188920004 4.0303909962464 5.02422565360138 5.22061776905955 7.6431589523339 7.34387236242079 6.44793138972741 6.59226800448167 7.36511045678493 7.6303263782973 6.18946286228425 7.03022430441542 6.67884439315576 6.12942068739546 4.81422889227126 6.50398567769463 6.3289694041259 0.225094449257375 0.225940825963174 0.233405994695124 0.232516706457454 0.234541743490153 0.232831385954112 0.228506957417228 0.235145454155684 0.240229549330878 0.223628775773242 0.221456061793254 0.221456061793254 0.236428502627557 0.221456061793254 0.233950224163679 0.222918424641210 0.236568799081542 0.223625011345797 0.227061487439287 3 3|0 -|/ 424248 424894 424618.4 423808 427068 - gene protein_coding_gene FALSE TRUE AT3G02250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15740.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96934.1); similar to Os06g0284200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057398.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96844.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) -0.93098100717115 -8.9810879388843 2.31451311877109e-06 0.0350579302100256 9.48868020203017 12.1729447914355 -0.93098100717115 0.106625349016452 AT1G78210_at 8.6505259907793 8.82862532222397 9.10407083881204 9.06418764659953 9.1540326777517 8.9581457120395 8.0321588232638 7.87550546707701 8.8183786161285 7.67865334868528 9.56605610754924 9.49072891168682 8.55330249595146 9.16585319182145 9.3398021447109 8.6329106545785 8.06592502183987 8.83831369441885 7.84189607762746 0.144777592040633 0.141334734117841 0.143139823962000 0.141467102120422 0.148667036189797 0.151525148486330 0.142923815063165 0.148115316905836 0.155262233249862 0.162682585828139 0.145118038625120 0.148352454295650 0.150926180442422 0.151792447952482 0.141902315530175 0.144619174321740 0.172021484752758 0.146282038739421 0.15441187141282 1 1 - 29427714 29428814 29428364.091 29427609 29429268 - gene protein_coding_gene FALSE TRUE AT1G78210.1 hydrolase, alpha/beta fold family protein similar to hydrolase [Arabidopsis thaliana] (TAIR:AT5G09430.1); similar to Putative hydrolase [Oryza sativa] (GB:AAM08532.1); similar to Os07g0622700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060317.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.783520415818615 8.97260548641 2.33579300621424e-06 0.0353779208721209 9.48270867928075 17.2432003308017 0.783520415818615 0.0536809927556253 AT2G26580_at 6.39137020265265 6.50951277494436 6.30530475174941 6.64012225028863 8.10500888901056 7.69345199013419 6.35193860417078 6.48653926232381 5.92297648985688 5.63391452985194 6.86835779416223 7.47046277199331 6.87431005274262 6.64887074481093 6.87683114887631 6.42241414355096 6.56463406765863 6.30918404375767 5.57512222013558 0.203308839237783 0.205271767766012 0.206378808039906 0.201475076167905 0.220987184572707 0.208459499196841 0.209353976764188 0.207049261682038 0.223234088668322 0.204664073498773 0.205095329241779 0.207070109446375 0.201475076167905 0.210008501664789 0.205596386614179 0.203537009139087 0.211859227364543 0.205898788891371 0.211645096144181 2 0|2 /|- 11311813 11312038 11311932.25 11310668 11314031 - gene protein_coding_gene FALSE TRUE AT2G26580.1|AT2G26580.2 plant-specific transcription factor YABBY family protein Identical to Axial regulator YABBY5 (YAB5) [Arabidopsis Thaliana] (GB:Q8GW46;GB:O48725); similar to YAB2 (YABBY 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G08465.1); similar to YABBY-like transcription factor PROLONGATA [Antirrhinum majus] (GB:AAS10178.1); contains InterPro domain YABBY protein; (InterPro:IPR006780); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.897421887634372 8.96611676992937 2.35221394422818e-06 0.0356242801853358 9.4781351515288 13.0429331786054 0.897421887634372 0.0969039431681906 AT2G31840_at 7.64446650648231 7.66017063234704 6.42206149277039 6.74811726475503 7.55129611282088 6.77852204776516 8.42899980216849 7.9965364066287 8.06349007251882 8.36730682958954 6.42415774425512 7.14120522209921 6.75562973703813 7.18860515495636 7.58574352345223 7.53717886321402 7.53685638993475 6.80673679119885 8.64108036859836 0.191994714427038 0.191414886180206 0.207449957621174 0.202099555646982 0.194263895254725 0.206010664585894 0.194501064376335 0.191414886180206 0.201771167414900 0.193588297571308 0.199352629391980 0.196713631036912 0.196025194574241 0.195105283460934 0.197417731777200 0.193784501852697 0.195260963508619 0.204728845773661 0.199198542717360 2 2|0 -|/ 13545112 13546097 13545567.1 13544989 13546835 - gene protein_coding_gene FALSE TRUE AT2G31840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28590.1); similar to Os05g0417200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055561.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77387.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -1.14641117633955 -8.95944990694419 2.36921574540283e-06 0.0358794032483805 9.47343102683886 15.143424584136 -1.14641117633955 0.163329440028743 AT4G17230_at 8.57635456773428 8.71971456358328 9.1303343479733 9.39968374165063 9.07544769190298 9.16090677155088 7.71461387191864 7.56370958066553 6.50592850279215 6.59960663068338 6.7893747102222 6.08756515560024 6.67955258357822 7.03336158102243 6.48262547815293 6.74115834528022 7.8274599284349 7.45445572928682 5.91800591726984 0.220664496528327 0.224648419877120 0.227576062080417 0.222415155780042 0.223847072531122 0.224647307253698 0.223734002597218 0.226270605176622 0.231896423996181 0.228767189933049 0.221740624182798 0.226784356381400 0.226482860309130 0.224541517372826 0.240220998390739 0.223136121292124 0.224812161186658 0.224008319342811 0.228374461615251 4 4 - 9661523 9661889 9661738.636 9660996 9663783 - gene protein_coding_gene FALSE TRUE AT4G17230.1 SCL13 (SCARECROW-LIKE 13); transcription factor Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family. similar to PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G48150.2); similar to GRAS family transcription factor [Brassica oleracea] (GB:ABD65110.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.796879415496401 8.95304532212539 2.38567381882544e-06 0.0361262586384736 9.46890715694307 15.2816579117203 0.796879415496401 0.0607361578133412 AT3G28040_at 7.71542265050257 8.29065949072345 6.622452591974 6.41140774167654 7.74500338362192 7.91591861989433 8.80859345323142 9.02243981846649 9.27322864101864 8.77788592045932 8.82776449757573 9.09536728588667 8.32191618990662 8.46759015340765 8.79342278181968 8.43316015456978 6.79255584620872 8.39861376159483 9.02593243369952 0.149681756659641 0.147192750120119 0.163546506523425 0.174666786516391 0.150840041218138 0.148220446783242 0.143450909648768 0.149162639917227 0.148094806763135 0.149289292499591 0.143794082450965 0.143450909648768 0.149692570096883 0.145653869605846 0.146550086678632 0.143450909648768 0.171995144574022 0.149017293289534 0.147781829949398 3 3 + 10438962 10439475 10439232.909 10436294 10439628 + gene protein_coding_gene FALSE TRUE AT3G28040.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01890.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G56370.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB92869.1); similar to Protein kinase [Medicago truncatula] (GB:ABE85779.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26311.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.95998338339695 -8.94241732150154 2.41325821212682e-06 0.0365415558480244 9.46138967210528 16.5249778015599 -0.95998338339695 0.116137555683746 AT2G04530_at 5.69725564550659 5.56828398228558 4.61160249334743 4.42180139452345 3.89293483166441 4.28794124247707 4.44971466794929 4.88900517395871 5.04106025036135 3.92119113654999 2.61755883455858 3.14560232553208 3.17539913620338 3.36602963527603 3.88228203473585 3.81693324867370 4.07175009141633 3.22729008330318 4.35227145599006 0.269901259056181 0.268668944002526 0.277299980791962 0.267966128877001 0.27221023316854 0.274953139593002 0.268051640689148 0.26919601554689 0.276210702560989 0.266366885983097 0.269522159119842 0.265326582460770 0.272707675254591 0.272714381958262 0.270355657470868 0.265367462009147 0.273200997994407 0.26691198047086 0.264034954076661 2 2|0 +|/ 1577731 1578251 1578000.125 1576706 1578738 + gene protein_coding_gene FALSE TRUE AT2G04530.1 CPZ Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast. Identical to Ribonuclease Z, chloroplast precursor (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase CPZ) (CPZ) [Arabidopsis Thaliana] (GB:Q8L633;GB:Q8LGU8;GB:Q9SJB8); similar to NUZ [Arabidopsis thaliana] (TAIR:AT1G74700.1); similar to Os02g0214300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046280.1); similar to RNase Z (ISS) [Ostreococcus tauri] (GB:CAL55620.1); contains domain RIBONUCLEASE Z, CHLOROPLAST (PTHR12553:SF4); contains domain no description (G3D.3.60.15.10); contains domain Metallo-hydrolase/oxidoreductase (SSF56281); contains domain ELAC RELATED (PTHR12553) -0.936406742088347 -8.93313454261152 2.43763325585936e-06 0.0369082051269666 9.45481305478738 8.65283240630383 -0.936406742088347 0.109676847099523 AT4G01660_at 5.61635616957098 5.28051553318862 5.30593361137272 5.14869541483855 4.71965797742674 4.61108575637332 6.1053414461857 5.92787228667101 4.08600892779114 4.61209107874734 3.58390792139951 3.35864547063170 3.51962302960424 3.65606037874225 3.69151250092714 4.02065382869714 4.10837371883005 3.50776742705782 4.94217855126922 0.253930083568545 0.258725243948045 0.257082855244623 0.255484739897735 0.252240584432793 0.256185679705809 0.253381324217763 0.25398681392765 0.251735780005928 0.250536133460710 0.257210621088780 0.250564686211784 0.257996730135907 0.255901816471308 0.252539860666421 0.255376009570875 0.263001890031285 0.250636052783164 0.253375175444796 4 4 + 710469 711051 710848.727 708544 711256 + gene protein_coding_gene FALSE TRUE AT4G01660.1 ABC1At (ARABIDOPSIS THALIANA ABC TRANSPORTER 1) Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant similar to ATATH13 (ABC2 homolog 13) [Arabidopsis thaliana] (TAIR:AT5G64940.2); similar to ABC1 protein [Capsella rubella] (GB:AAM18498.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) -0.826059826842123 -8.93024573720275 2.44527296172865e-06 0.0370214326405717 9.45276438030919 9.45322105133118 -0.826059826842123 0.0735830411081689 AT1G77000_at 7.89358795688064 7.66220420437228 8.09759968705977 7.77689191913746 9.14420368168232 8.73746800573938 7.1881774496311 6.73122744171052 4.96223220504183 6.00645767270042 6.60180665394855 5.86881217258145 7.01072630366304 6.86935611189196 5.29721849853875 6.4193085728518 7.30476717719861 6.20663434661497 5.61575749122078 0.170659490888856 0.169789235257373 0.171571838062271 0.170524255670307 0.181409024954573 0.172594584542595 0.169821312043124 0.178364964244341 0.187280182481098 0.174641636784458 0.174735330095893 0.17738301928223 0.169506421271975 0.175921357035063 0.172248902997403 0.170800222283348 0.187616772822794 0.181544228628618 0.170466019883228 1 1 + 28946793 28947239 28947038.545 28945644 28947490 + gene protein_coding_gene FALSE TRUE AT1G77000.1 ATSKP2;2 (ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2); ubiquitin-protein ligase AtSKP2;2 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G21410.1); similar to Os05g0425700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055598.1); similar to Os01g0881900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045004.1); similar to GA21468-PA [Drosophila pseudoobscura] (GB:EAL25131.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.994710583464781 8.929936260436 2.44609293404199e-06 0.0370314009284617 9.4525448493644 13.8916589696011 0.994710583464781 0.126060450025374 AT2G31360_at 10.9796847340874 11.3010653323705 10.6422884014812 10.7421690931070 11.3707220573602 10.9562118500961 10.0695523671682 10.1338052302481 9.9481914023025 9.52206752258146 11.2646730569763 11.3155918667878 11.1687624719413 11.4002278345858 11.0009470752994 10.3308780912864 10.3150730084955 10.9801027003507 9.07614625920432 0.099644197941108 0.0934108637578452 0.0969132143469712 0.0972995396951305 0.099859869687933 0.0996583893883922 0.103555176313071 0.0959210209553026 0.095414119748411 0.097649412086128 0.0945313760947197 0.0934108637578452 0.0934108637578452 0.094832734706078 0.0979462462437364 0.0934108637578452 0.103035434930658 0.0934108637578452 0.106169054132338 2 2 - 13379215 13380115 13379733.636 13378735 13380683 - gene protein_coding_gene FALSE TRUE AT2G31360.1 ADS2 (16:0DELTA9 ARABIDOPSIS DESATURASE 2); oxidoreductase homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression up-regulated by cold temperature. Identical to Delta-9 acyl-lipid desaturase 2 (EC 1.14.19.-) (ADS2) [Arabidopsis Thaliana] (GB:Q9SID2;GB:O65798;GB:Q8LD80); similar to ADS1 (DELTA 9 DESATURASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G06080.1); similar to Delta-9 desaturase [Rosa hybrid cultivar] (GB:BAA23134.1); similar to desaturase delta 9 [Picea glauca] (GB:AAM12238.1); similar to delta 9 acyl-lipid desaturase/delta 9 acyl-CoA desaturase homolog [Rosa hybrid cultivar] (GB:AAB50679.1); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR001522); contains InterPro domain Fatty acid desaturase; (InterPro:IPR005804); contains InterPro domain Acyl-CoA desaturase; (InterPro:IPR012196) 0.881692276530969 8.9292309931085 2.44796268121625e-06 0.0370572590682516 9.45204451846673 21.0181875871956 0.881692276530969 0.0930655712822077 AT1G52880_at 8.61341256409345 8.79628828924266 9.54385261655425 9.63401883186829 9.75923152755503 9.7767638420275 9.12906927353036 9.15158508078416 7.9464459964473 8.47726869355816 8.85878557469463 8.1399030398277 9.47517877226128 9.08411638131303 8.29972036351975 9.36626073648046 9.79205545783756 8.76362735199197 8.27257462744802 0.146552679866978 0.140232141530776 0.148328141652423 0.150702140479791 0.146371932065860 0.142066233476322 0.143010107677180 0.146406900827089 0.162236658413304 0.159012036489008 0.143225240445371 0.151338491333088 0.149814511713517 0.143560636739584 0.151826401302904 0.144608258296789 0.149422019293536 0.153012949444532 0.153075032933152 1 1|0 -|/ 19692994 19693528 19693181.1 19692625 19694210 - gene protein_coding_gene FALSE TRUE AT1G52880.1 NAM (Arabidopsis NAC domain containing protein 18); transcription factor Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo. Identical to NAC domain-containing protein 18 (ANAC018) (Protein NO APICAL MERISTEM) (AtNAM) (NAM) [Arabidopsis Thaliana] (GB:Q9ZNU2;GB:Q8LDB9;GB:Q8LPH5); similar to ATNAC2 (Arabidopsis thaliana NAC domain containing protein 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G15510.1); similar to NAM-like protein [Prunus persica] (GB:CAG28971.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.748118711589127 8.92088613654095 2.47020351625693e-06 0.0373914706255811 9.44612014643672 17.9028039526529 0.748118711589127 0.0356290180442247 AT4G05590_at 8.78244212165935 8.8196315917198 10.0156627444833 9.76923564354088 10.0086151182011 9.76366743297063 8.234066947909 8.5463298753072 6.84917004237757 6.96693498674997 7.23502283915114 7.10954740423318 7.4415093581637 8.04090508616398 5.99630890072783 7.5878837438778 8.04265363702853 7.12646990042457 6.96528268891267 0.254769919955715 0.254080169814303 0.2600392547574 0.262506021912948 0.255964695742302 0.255146505116342 0.250729904311611 0.25131472389934 0.265470612191529 0.254548048098478 0.252077285720946 0.250729904311611 0.252502026496515 0.250729904311611 0.254796734024032 0.25706005995649 0.265440155992344 0.263803021375746 0.250729904311611 4 4|0 +|/ 2907191 2908033 2907758.714 2907062 2908553 + gene protein_coding_gene FALSE TRUE AT4G05590.1|AT4G05590.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22310.1); similar to Protein of unknown function UPF0041 [Medicago truncatula] (GB:ABD28486.1); contains InterPro domain Protein of unknown function UPF0041; (InterPro:IPR005336) 0.844542985012374 8.91024580545595 2.49887953950445e-06 0.0378230407099394 9.4385544373621 16.3672898585080 0.844542985012374 0.0810991241239087 AT1G25560_at 8.40594267465714 8.63760686273441 7.91744806006432 8.07149029303365 7.87755027014609 8.0145834003024 4.48214627016749 5.30670103655405 6.08113313882973 5.66328486455978 6.58540947224088 6.94059922970165 6.56925167787006 7.05975184199531 6.36835397455937 7.10945768316789 6.63682165576925 5.87257800430957 5.40781696255329 0.204465834292543 0.208502053946632 0.201618532323938 0.201800255015540 0.201183988051822 0.208143560643663 0.225760971163617 0.209727647457849 0.211193321680577 0.211376560847734 0.198501362319038 0.198000746820538 0.204806231230413 0.206997854744419 0.202326426399056 0.198000746820538 0.216100169876085 0.204085552509777 0.205368206681113 1 1 - 8982031 8982423 8982235.091 8981664 8983028 - gene protein_coding_gene FALSE TRUE AT1G25560.1 AP2 domain-containing transcription factor, putative similar to RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G68840.1); similar to DNA binding protein Rav [Capsicum annuum] (GB:AAQ05799.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 1.09376754099791 8.89803744133309 2.53222531301503e-06 0.0383252301124824 9.42985763402725 13.5192784073405 1.09376754099791 0.152451822920539 AT2G39480_at 7.23999759564145 7.15196637548152 7.45672816708135 7.52615439639231 7.75500818738167 8.03365890703543 6.10346660054668 5.87344440011106 6.32384706260879 5.81808229111024 7.32486725836431 6.26057358315977 6.53407257791877 6.70130127208375 6.2801649989337 6.4886604612102 6.50505990773922 6.65927610465985 6.12955302099218 0.225702341962637 0.226913108714950 0.23287477089497 0.235416478490193 0.230381146024815 0.241048870080985 0.225686223710507 0.22451250946045 0.233309640125625 0.226515851807416 0.224271761322287 0.224271761322287 0.227831936539184 0.228028816620535 0.226502491466543 0.224271761322287 0.227404843074997 0.224271761322287 0.240711313625192 2 2 - 16485335 16485897 16485601.182 16484870 16492117 - gene protein_coding_gene FALSE TRUE AT2G39480.1 PGP6; ATPase, coupled to transmembrane movement of substances Identical to Multidrug resistance protein 6 (P-glycoprotein 6) (MDR6) [Arabidopsis Thaliana] (GB:Q8LPT1;GB:O80635); similar to PGP4 (P-GLYCOPROTEIN 4, P-GLYCOPROTEIN4), ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase [Arabidopsis thaliana] (TAIR:AT2G47000.1); similar to PGP20 (P-GLYCOPROTEIN 20), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G55320.1); similar to Os01g0976100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045564.1); similar to Os03g0280000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049736.1); similar to MDR-like ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:CAD59584.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.80221078356624 8.89055049350821 2.55291270481625e-06 0.0386357808746892 9.4245156424489 13.4849236514151 0.80221078356624 0.0654700200335014 AT4G00490_at 7.86341372244175 8.19368200025321 7.3086827535885 7.1727283100361 6.82509312293458 6.8133923190729 8.0993913301776 8.22932843790613 7.80396565003205 7.799275089358 7.08470676552149 7.52374989676291 6.4140389018749 7.07435081538279 7.3804372206286 7.30952896144581 6.38325136743671 6.82494940346311 7.00767896524975 0.202883459305397 0.197087318465289 0.205014064773896 0.198118989672162 0.193532044888524 0.20611852555041 0.203265286624642 0.205779558565390 0.203684332455229 0.211105640100359 0.197875925022451 0.203008280130282 0.204596739216372 0.20137074765015 0.202892468533998 0.200342087346357 0.217931656653761 0.214017199069802 0.209153740121358 4 0|4 /|+ 224249 224819 224520.889 222320 225131 + gene protein_coding_gene FALSE TRUE AT4G00490.1 BMY9 (beta-amylase 9); beta-amylase similar to BMY4 (beta-amylase 4), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G45880.1); similar to Os09g0569200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063976.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O64407); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) -0.802038157301024 -8.87990417479826 2.58264494336295e-06 0.0390831659279115 9.41690819460119 14.8313889502736 -0.802038157301024 0.0658020434970249 AT1G74070_at 5.96453566192687 5.96043196653591 4.88980238440887 4.45081198215172 5.55196624485951 5.64337177546494 7.42384690631592 7.18559577219477 7.47111593631849 7.50102677508658 7.0220744760897 7.77755672043557 6.70382010321122 7.42100609635824 8.0713331701586 7.34334962139572 6.44561794398614 6.899125163522 7.31055429153014 0.211282395202732 0.199841418312324 0.211177951106019 0.209982942487803 0.200212204156860 0.201214970569435 0.202218903056133 0.196079504396267 0.207514742782159 0.197075847093473 0.197980872900592 0.199401611963501 0.199903758201880 0.198721809014553 0.194703467460988 0.194716883429333 0.198216231633496 0.195770305480067 0.200882371491517 1 1|0 -|/ 27855612 27855985 27855833.2 27855149 27856637 - gene protein_coding_gene FALSE TRUE AT1G74070.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT5G35100.1); similar to Os01g0111100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041801.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD44942.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) -0.858347367886266 -8.85092924629896 2.66547531870035e-06 0.0403339725225737 9.39613691511618 13.2028208765022 -0.858347367886266 0.0878749682393524 AT3G50770_at 5.97394295302198 5.78424559831031 10.2735346265395 10.3991139013416 9.72570383715477 9.55196416721253 10.0343778715789 9.87488499996599 2.07662795902306 3.53277468757833 1.75984117252731 1.94148945564267 2.11470793203133 2.08348696831135 1.85104060909148 2.11916212948913 2.22267425265323 2.41258444182149 2.12010948960767 0.380285057339538 0.380266261554814 0.383325510521463 0.383228080789894 0.380651102648029 0.383556486701909 0.373792970079041 0.389630349079244 0.368105247636547 0.375160665500144 0.368513344525129 0.365150555663446 0.362667582003703 0.366649726021908 0.374984979808092 0.361780791103124 0.364154388904609 0.365935317614942 0.362630357161294 3 3 + 18884988 18885428 18885173.909 18884939 18885761 + gene protein_coding_gene FALSE TRUE AT3G50770.1 calmodulin-related protein, putative Identical to Calmodulin-like protein 41 (CML41) [Arabidopsis Thaliana] (GB:Q8L3R2;GB:Q9SVM1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G76650.1); similar to calmodulin-like protein [Musa acuminata] (GB:AAL06347.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.778667801067896 8.84607622723616 2.67962708925796e-06 0.0405454374875621 9.3926483342289 11.2720347021902 0.778667801067896 0.0567077424119063 AT1G53100_at 4.38498851902133 4.4171539165769 7.13908539335766 6.77535704667145 7.11927267472018 5.63693308093946 2.92059958161427 2.74870174368967 1.80685344817361 2.20815897367509 1.92346007877593 1.94355552278718 2.24677912503363 2.50909217216794 1.88374426077319 2.05273133753115 2.54747242134857 2.02617984781942 1.98693683900946 0.357417294537147 0.360913250438517 0.388845999179511 0.38656671813099 0.391497631278573 0.384935569187110 0.357417294537147 0.357417294537147 0.361122428500061 0.357417294537147 0.357417294537147 0.371939236871085 0.359487257669450 0.357417294537147 0.361852314357754 0.36058613129415 0.363545238254152 0.358164553187969 0.357417294537147 1 1 - 19790719 19791251 19790948.182 19790624 19792637 - gene protein_coding_gene FALSE TRUE AT1G53100.1 acetylglucosaminyltransferase similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT3G15350.2); similar to glycosyl transferase family 14 protein [Musa balbisiana] (GB:ABF70128.1); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) 1.59538910042844 8.84283176358102 2.68913345682016e-06 0.0406865892016890 9.39031452096704 7.21389979427337 1.59538910042844 0.265863585502684 AT3G18560_at 4.4190790885333 4.71839377178207 2.79111492381168 2.83683827712563 3.3269878176095 3.76852643004005 4.36580083513618 4.41590918345882 4.34868125259678 3.16189484646638 2.73266040339291 3.48502865288297 3.19858529780025 3.33658645519215 3.09327027742263 3.42542434262976 3.66343622242320 2.74285494643320 3.45876022036161 0.228285013498502 0.213214758585022 0.220847069561659 0.209474402003692 0.21075285924709 0.212756033086478 0.211268076788307 0.214481018893510 0.208679152453021 0.209638891656122 0.209627855272587 0.210962813597025 0.213643133128375 0.214149308826262 0.224294789011153 0.212448573471476 0.20802514624345 0.213802803723635 0.211430532394997 3 3 + 6393995 6394526 6394201.818 6393916 6394791 + gene protein_coding_gene FALSE TRUE AT3G18560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49000.1); similar to Os02g0711400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047903.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45365.1) -0.872821736308503 -8.83970353747563 2.69833375612505e-06 0.0408230913964158 9.3880631517398 7.26341942322735 -0.872821736308503 0.0930556456100234 AT2G02950_at 7.72571559358293 8.24363465183198 5.7923878644855 6.26087124641871 7.36546229816826 7.62596404477507 8.21605795437793 8.11345787782308 7.5972520523461 8.03384723487311 7.15847096877778 7.54482120276251 7.24759709853371 7.07435677992867 6.89743366065148 7.59791659062291 6.76926011478796 6.21981394238571 7.61396199475672 0.218090277517144 0.216929898826598 0.220532095202187 0.218100714153703 0.220544174789440 0.222683048742949 0.22233362736618 0.215980250738158 0.226673279112714 0.215980250738158 0.218596794085372 0.225750194800227 0.217227843275042 0.225958113721697 0.220622318362776 0.215980250738158 0.235664639286801 0.236460120782878 0.218833366266773 2 2 - 855155 855678 855405.909 854946 856537 - gene protein_coding_gene FALSE TRUE AT2G02950.1 PKS1 (PHYTOCHROME KINASE SUBSTRATE 1) Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. Identical to Phytochrome kinase substrate 1 (PKS1) [Arabidopsis Thaliana] (GB:Q9SWI1;GB:O80610); similar to PKS2 (PHYTOCHROME KINASE SUBSTRATE 2) [Arabidopsis thaliana] (TAIR:AT1G14280.1); similar to putative phytochrome kinase substrate 1, putative [Medicago truncatula] (GB:ABE90777.1) -0.999095060897196 -8.83138398744465 2.72296794949063e-06 0.0411930591398942 9.3820700261632 14.8239752191654 -0.999095060897196 0.130206214709465 AT1G11260_at 11.1642915289600 11.3659693405995 11.3346375040346 11.4653846343069 12.0143159520868 12.0542107682615 9.38633561600392 9.54032450999829 10.9250641220056 10.2824608892838 11.4552293032836 10.7482515533412 11.1363287704844 11.1468135843968 10.6933219133736 10.8317289508290 10.7785202885365 10.5270664355938 11.0314243475849 0.121817261845006 0.119202428142899 0.119993230125574 0.121351079388640 0.120915264710416 0.124200448082050 0.129054535740103 0.125477096658389 0.129676113846440 0.121925600006119 0.123345550757266 0.11873138298276 0.11873138298276 0.128037650753070 0.119700091015407 0.120738198303856 0.11873138298276 0.122088327687468 0.122739118726758 1 1|0 +|/ 3779449 3779968 3779738.333 3777329 3780337 + gene protein_coding_gene FALSE TRUE AT1G11260.1 STP1 (SUGAR TRANSPORTER 1); carbohydrate transporter/ sugar porter Encodes a H+/hexose cotransporter. Identical to Sugar transport protein 1 (Hexose transporter 1) (Glucose transporter) (STP1) [Arabidopsis Thaliana] (GB:P23586;GB:Q56Z12;GB:Q8H775;GB:Q8LBC8;GB:Q9SXB1); similar to STP4 (SUGAR TRANSPORTER 4), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G19930.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G19940.1); similar to glucose transporter, putative [Arabidopsis thaliana] (TAIR:AT4G21480.1); similar to monosaccharide-H+ symporter [Datisca glomerata] (GB:CAD30830.1); similar to monosaccharide transporter [Populus tremula x Populus tremuloides] (GB:CAG27609.1); similar to hexose transporter 1 [Juglans re (GB:AAY89231.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.760624056401892 8.79427901540235 2.83583278850293e-06 0.0428976425916838 9.35524172214426 21.8711707582504 0.760624056401892 0.04987846342282 AT1G13260_at 9.24183163887757 9.21895468541513 9.21779661854019 9.1954420529883 9.8628098788341 9.67335561872538 8.04484430793672 8.29094175155923 8.58135236860615 8.22481625017326 9.32558304550344 9.01126544182504 9.223165162887 9.52946693799231 8.67673791813117 9.10384867573595 9.093195932093 8.71936234968057 8.20496642495417 0.115383407489441 0.115961214995720 0.116252427846945 0.112922258509933 0.117258299060774 0.124047799255472 0.121703104835664 0.115817998717002 0.116460719461389 0.118684721292646 0.114786286870780 0.118127715010026 0.115406914242413 0.115365452852882 0.113151305352587 0.114083333281538 0.117418783506549 0.119160957143615 0.120912153756364 1 1 + 4542898 4543387 4543143.636 4542165 4543739 + gene protein_coding_gene FALSE TRUE AT1G13260.1 RAV1 (Related to ABI3/VP1 1); DNA binding / transcription factor Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator. Identical to DNA-binding protein RAV1 (RAV1) [Arabidopsis Thaliana] (GB:Q9ZWM9); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G25730.1); similar to DNA binding protein Rav [Capsicum annuum] (GB:AAQ05799.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 0.768245557364017 8.78970508531479 2.85009185026352e-06 0.043110489327086 9.35192335354975 17.8044336678890 0.768245557364017 0.0540307451384626 AT3G23940_at 6.14319191233414 6.59115229907994 5.55173122842738 5.33139178233009 4.84404728017395 4.80608122945174 6.47807471873659 6.83383126349153 5.75572889254923 6.4251890980967 5.50091121494589 6.50940340405132 5.08890035080801 5.09322175586721 6.6766891370198 5.33929325834468 4.93992441787262 5.85408062612182 6.0113610322222 0.189833568709017 0.194045937844527 0.186985017543719 0.186297371118969 0.191060397136879 0.189017627765971 0.189293732120566 0.192089766880751 0.192286827347206 0.186297371118969 0.189522160506960 0.186297371118969 0.186297371118969 0.195084359758199 0.192340598286719 0.190181614699592 0.209800164456940 0.188693420091312 0.188112940587637 3 3|0 +|/ 8650929 8652288 8651651.6 8648712 8652612 + gene protein_coding_gene FALSE TRUE AT3G23940.1 dehydratase family similar to dihydroxy-acid dehydratase [Rhodopirellula baltica SH 1] (GB:NP_870314.1); similar to dihydroxy-acid dehydratase [Blastopirellula marina DSM 3645] (GB:ZP_01094431.1); similar to Dihydroxy-acid dehydratase (DAD) (GB:Q7UJ69); contains InterPro domain Dihydroxy-acid and 6-phosphogluconate dehydratase; (InterPro:IPR000581); contains InterPro domain Dihydroxy-acid dehydratase; (InterPro:IPR004404) -0.908519827654275 -8.7752133593091 2.89578309964347e-06 0.0437987193821075 9.34139331468323 11.6671357283790 -0.908519827654275 0.106287424500250 AT4G39770_at 4.49280237105709 4.61370149220321 5.36723128809921 5.46686855858368 6.79285935147054 6.12462328034942 6.99567335254202 7.05718490674664 4.32549787950146 5.15017512728342 7.10320255101938 7.36422117169078 6.57317459252022 6.6952129484499 6.71105871730707 6.66371905531222 5.946835344265 6.8116345340818 5.45185106812918 0.251463573005988 0.241904988532674 0.245663248263652 0.260414765596259 0.244357678687823 0.248804403107810 0.250062686620336 0.26638392361373 0.269906491438498 0.250848331824281 0.255622021296372 0.24692826072505 0.251079768090864 0.254703846362100 0.245542871327175 0.252128175338437 0.26120011010244 0.253814317139211 0.242856148629569 4 4|0 -|/ 18449500 18450228 18449870.4 18448974 18451287 - gene protein_coding_gene FALSE TRUE AT4G39770.1 trehalose-6-phosphate phosphatase, putative similar to trehalose-phosphatase [Arabidopsis thaliana] (TAIR:AT2G22190.1); similar to 117M18_9 [Brassica rapa] (GB:AAZ66928.1); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337); contains InterPro domain HAD-superfamily hydrolase subfamily IIB; (InterPro:IPR006379) 0.952923047507288 8.7746108851316 2.89769970548077e-06 0.0438248103456912 9.3409550036977 11.7186049364492 0.952923047507288 0.119253035032274 AT1G08800_at 4.87630289206 5.02888470440431 5.7548083665403 5.98452516108903 6.96255896756244 6.5413109566417 6.03056110584154 5.75688079047754 4.28767427639551 5.06791989882645 5.88218141597805 4.87444562651856 5.7459275723626 5.89862412399984 4.03900265642643 5.99105765901536 6.43322850534008 5.36821456175204 4.58874331195755 0.209249378904951 0.207240774492919 0.200973859463809 0.201914109353517 0.203447692725469 0.210270367028164 0.202249898511271 0.201901667576826 0.208327376305499 0.215132428584484 0.200973859463809 0.203987546089986 0.204375981517827 0.216755004599949 0.204218037028035 0.204424424396249 0.206995704747152 0.205333849374132 0.203990599199005 1 1 - 2813605 2814156 2813851.545 2813064 2817642 - gene protein_coding_gene FALSE TRUE AT1G08800.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30690.1); similar to Os10g0414800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064597.1); similar to Os01g0775200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044407.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM15784.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.884308129605068 8.76390173744842 2.93199757166672e-06 0.0443405992763158 9.3331567168124 10.9555779985274 0.884308129605068 0.099171317653126 AT1G53645_at 6.6683527760379 6.6607651070186 5.56596842782329 5.61741448789677 4.60537613679154 4.45335820161730 5.58699178938368 6.02451392998854 4.08585649594349 4.05992600691522 3.45027318869275 3.89553807482924 3.71689534929491 3.33603121405097 3.74456344072310 3.58862944667994 3.72386122734432 3.70027247508793 4.23618047701686 0.221187738918472 0.214345009095615 0.214194624939307 0.215078439603558 0.210045867973546 0.220005858614841 0.216257597357627 0.213532822969247 0.219872435381742 0.216467262307346 0.211828390191408 0.214483912191220 0.212913684476546 0.216006245932576 0.221482699727397 0.210302453190167 0.225570553281013 0.217452193031074 0.214889251058858 1 1 - 20030127 20031247 20030619.818 20029815 20032303 - gene protein_coding_gene FALSE TRUE AT1G53645.1 hydroxyproline-rich glycoprotein family protein similar to actin binding [Arabidopsis thaliana] (TAIR:AT1G31810.1); similar to hydroxyproline-rich glycoprotein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45380.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) -0.82871976413946 -8.7560695818676 2.95735894092342e-06 0.0447211819046439 9.32744480090456 9.53375712975958 -0.82871976413946 0.0806589476084426 AT4G17110_at 7.35258165148018 6.63475426394613 6.85391713457956 6.44302198197863 7.23579809805458 7.14582083078268 4.27515518289126 4.02705400858466 5.20524485664453 5.58987627233132 5.90937245424422 5.4323337705992 5.80464967968866 5.94231661678906 6.52206161254995 5.86227766186457 6.59598290191081 5.94576343302059 4.84914649858232 0.234327498918469 0.220841054157144 0.228955598965975 0.223623413508682 0.220841054157144 0.234347145452407 0.226598025143441 0.235545698623532 0.225596938725406 0.226773745501271 0.222538464740640 0.220841054157144 0.229207846567356 0.22784422793317 0.220841054157144 0.220841054157144 0.225519862734716 0.220841054157144 0.221298185118424 4 4|0 -|/ 9613730 9614430 9613966.5 9613629 9615510 - gene protein_coding_gene FALSE TRUE AT4G17110.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17120.1); similar to unknown protein [Oryza sativa] (GB:AAG60185.1); similar to Os10g0565300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065419.1) 1.06717106255198 8.75308555641728 2.9670837942149e-06 0.0448652740523235 9.32526666070311 11.8543132151303 1.06717106255198 0.150245047144289 AT3G02910_at 6.78040096133859 7.26255842249038 7.9559059584286 8.07177673288082 7.62726549309964 7.789970668346 7.1671724349707 7.33518999863892 7.23592113740153 7.69894853630938 8.5899265680489 8.19960374070303 8.59537440695355 8.12472134522175 8.24609333803034 8.91782005284375 8.8497046738088 8.18722580992703 7.41495339337329 0.175794203909338 0.154052627526084 0.161943745696726 0.152959735452697 0.157554687787648 0.158470913627100 0.157861927284866 0.166747555577886 0.169877517463048 0.164046886695419 0.155725208421232 0.159866876721015 0.153916556980474 0.166638899907170 0.162795239806885 0.153727085592264 0.155973225924994 0.159786267428752 0.162439557617212 3 3 + 649995 650522 650234.455 649821 650928 + gene protein_coding_gene FALSE TRUE AT3G02910.1 Identical to UPF0131 protein At3g02910 [Arabidopsis Thaliana] (GB:Q9M8T3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46720.1); similar to Os03g0854000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051934.1); similar to Uncharacterised protein family containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22357.1); similar to Os11g0139900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065707.1); contains InterPro domain Protein of unknown function UPF0131; (InterPro:IPR005347) 0.86938348920493 8.74846931315259 2.98219611662425e-06 0.0450908052833587 9.32189502208298 15.4556549659260 0.86938348920493 0.0948814280444647 AT1G28520_at 5.47489092830359 5.7276074233517 6.41778445393088 6.30274711539354 5.98575161218445 6.17040093953063 4.97560319378092 5.19485586102006 4.88876005100218 4.83426465881265 5.56730634913714 5.03891494482917 5.45730375754036 5.27666827600121 5.09594555830016 5.71838643933813 6.22625542222427 5.46531608359677 4.56104948126954 0.214170452262198 0.222428835155810 0.222920925024382 0.226861750968275 0.222258290361131 0.229706838535122 0.220081997431243 0.221758008931721 0.216076131390192 0.212988301962654 0.213544000535656 0.218082928516635 0.216901581081339 0.221530663236985 0.217783554471347 0.213991676501755 0.217771713465885 0.218218552569517 0.218624641945735 1 1|0 +|/ 10030780 10031441 10031137 10029136 10031969 + gene protein_coding_gene FALSE TRUE AT1G28520.1|AT1G28520.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42400.1); similar to putative vascular plant one zinc finger protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87186.1); contains InterPro domain Colicin E3, catalytic; (InterPro:IPR009105) 0.797667859410957 8.74528698116941 2.9926626098505e-06 0.0452460659983297 9.31956921410031 10.9022652747198 0.797667859410957 0.0690629752348325 AT1G18560_at 2.98061406482894 2.97577973017743 3.97406373516911 3.5860526949707 3.89313031929454 3.73573427034307 2.626546629064 2.73297228300893 2.90269145814478 2.78886408433221 3.20063935589312 3.67925384452055 2.88509440829427 3.52173449823844 3.37255878308858 3.22906255438770 3.39846184360867 3.66887620508021 2.44966894787260 0.221066105902629 0.210916793898710 0.218678805227064 0.22406021030063 0.212806819650783 0.220666181844716 0.213095837795930 0.213427106375494 0.216710369676397 0.216287807021833 0.210916793898710 0.212960438964343 0.221142965619049 0.214976401311132 0.212579455180434 0.210916793898710 0.222550241351414 0.210916793898710 0.217528660632247 1 1 + 6387402 6387943 6387645.727 6385798 6388073 + gene protein_coding_gene FALSE TRUE AT1G18560.1 hAT dimerisation domain-containing protein / BED zinc finger domain-containing protein / transposase-related similar to Os05g0219300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054942.1); similar to Os01g0111400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041804.1); similar to hAT family dimerisation domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94985.1); contains InterPro domain HAT dimerisation; (InterPro:IPR008906); contains InterPro domain Zinc finger, BED-type predicted; (InterPro:IPR003656) 0.811992884015137 8.74515556760374 2.99309567317688e-06 0.0452496203870881 9.31947314452597 6.35471255756816 0.811992884015137 0.0747700041643499 AT2G41100_at 11.4411850895726 11.4811801127972 12.1800604277638 12.2060239893304 11.3775461056209 11.1636548870172 8.92070889897624 8.81405132834503 11.6354042182869 10.1364966725317 10.9260124060668 11.2592637200741 9.69069473100642 10.8968665879666 10.6240899966946 10.4861514007973 9.7229914730541 10.7017454175426 10.0922168269428 0.108429486195018 0.105788961430192 0.111748845965236 0.108881087503516 0.107355433959099 0.110281032596309 0.121635054153334 0.117415000939903 0.1106933176705 0.113269662173570 0.106591354757221 0.107037514587535 0.11674392992472 0.105788961430192 0.112576567678951 0.106550926062200 0.116875375891311 0.113377993493583 0.107695235755672 2 2 + 17145942 17146458 17146248 17145157 17146690 + gene protein_coding_gene FALSE TRUE AT2G41100.1|AT2G41100.2|AT2G41100.3 TCH3 (TOUCH 3) encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers. Identical to Calmodulin-related protein 3, touch-induced (TCH3) [Arabidopsis Thaliana] (GB:P25071;GB:Q38972;GB:Q39064;GB:Q8H1A0); similar to CAM2 (CALMODULIN-2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to calmodulin-related protein (GB:AAC37419.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299)|similar to CAM2 (CALMODULIN-2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to calmodulin-related protein (GB:AAC37419.1); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299)|Identical to Calmodulin-related protein 3, touch-induced (TCH3) [Arabidopsis Thaliana] (GB:P25071;GB:Q38972;GB:Q39064;GB:Q8H1A0); similar to CAM7 (CALMODULIN 7), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G43810.1); similar to CAM2 (CALMODULIN-2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to CAM3 (CALMODULIN 3), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G56800.1); similar to calmodulin-related protein (GB:AAC37419.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299) 0.742322194536742 8.73621003938113 3.02273471320267e-06 0.0456946806594848 9.31292869671913 21.5279761245466 0.742322194536742 0.0421767267286801 AT1G80450_at 1.30218733235413 1.43407035304657 2.47910803445756 2.79655170239541 2.17145806849553 2.53806699035978 0.760577064543876 1.15285713716186 0.909134228966964 1.11861614074608 1.51580311100675 1.27635831380922 1.3178491766853 1.54336274489535 1.69780406752870 1.01084858466304 1.80855595761718 1.25736213797090 0.753819342412002 0.233434061835341 0.233629770680805 0.235940577557175 0.237278064511752 0.235414401268653 0.241841386553943 0.234338931020507 0.248745534356485 0.239618301365905 0.239059271369748 0.233434061835341 0.236019361361899 0.240976965158368 0.23490084935705 0.238416301303175 0.237102367040426 0.235938801509678 0.233434061835341 0.243455503155465 1 1 - 30249070 30249525 30249324.545 30248822 30249675 - gene protein_coding_gene FALSE TRUE AT1G80450.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G08480.2); similar to VQ [Medicago truncatula] (GB:ABE77905.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.91758816744042 8.73270103597606 3.03444746095971e-06 0.045868707819867 9.31035894204612 3.00720104325871 0.91758816744042 0.110328200722618 AT1G11820_at 5.99741077413882 5.50580468172924 4.66745439700667 4.4568623413229 5.06237346241293 4.59140054999444 7.61418155994878 6.98183535161853 5.40638937473194 6.20898881838508 5.48358482334466 5.69430374949955 5.82641927345273 4.9562521607829 5.72047593956515 5.21795778672746 5.67315553532958 5.30927446485437 6.08632092486431 0.302791364040651 0.316695253467732 0.310427661579488 0.314082035718475 0.308845180547710 0.301890887503505 0.316110668037281 0.321600087417792 0.301890887503505 0.319658001768722 0.304897877968766 0.302923773691312 0.304351282656937 0.304354700763065 0.305483812390194 0.301890887503505 0.319951593791155 0.317123928641687 0.303836592609935 1 1|0 -|/ 3992005 3992228 3992117.833 3991039 3993524 - gene protein_coding_gene FALSE TRUE AT1G11820.1 hydrolase, hydrolyzing O-glycosyl compounds similar to glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] (TAIR:AT2G01630.2); similar to Glycoside hydrolase, family 17 [Medicago truncatula] (GB:ABE89104.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.12283690507025 -8.7256588355381 3.05810189616028e-06 0.0462232101604626 9.30519727716743 11.3025375594490 -1.12283690507025 0.164875125706602 AT2G20060_at 7.47088439348398 7.67317561937593 7.02708342427168 7.28940073467205 6.55935789895547 6.72137388331229 7.7303523879629 7.88633947728447 6.4238746252181 6.57443080354765 5.20456718724538 5.65534678455247 5.76037154460326 5.5807318832573 6.28757871084699 5.6146662660279 6.39232392516397 5.54539068651882 6.6727472314998 0.215604046668422 0.215937395881697 0.219690545375805 0.219478984056836 0.219161854436418 0.217929186520991 0.215604046668422 0.215604046668422 0.229885572642872 0.218612757100789 0.221557224267042 0.223411231425113 0.216290366160992 0.220592674749409 0.215604046668422 0.215951098452893 0.225706858981744 0.223797949390985 0.215604046668422 2 2|0 +|/ 8667375 8668284 8667928.6 8666124 8668570 + gene protein_coding_gene FALSE TRUE AT2G20060.1 ribosomal protein L4 family protein similar to RPL4 (ribosomal protein L4), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G07320.4); similar to Os12g0488600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066789.1); similar to 50S ribosomal protein L4 [Rickettsia bellii RML369-C] (GB:YP_538231.1); similar to Os11g0585700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068165.1); contains InterPro domain Ribosomal protein L4/L1e, bacterial like; (InterPro:IPR013005); contains InterPro domain Ribosomal protein L4/L1e; (InterPro:IPR002136) -0.79638970705939 -8.72523194535608 3.05954218966464e-06 0.0462419206545914 9.30488419236227 13.4508158158893 -0.79638970705939 0.0692895968369348 AT1G28395_at 4.54374878083784 5.16245775189675 3.47856738563287 3.69943995213971 3.38291483784443 3.82770732966559 5.64697966255004 6.37917317829127 4.21599999738214 4.60354965664087 3.84764612843004 4.24563967902784 3.82523261941388 3.54712614278562 4.69836786409018 4.14571623038191 3.5383449186548 3.79085991248157 4.82771735187567 0.235746553177782 0.231848632562737 0.233946328041169 0.238704580813767 0.229319802153126 0.235519382161966 0.235452574665452 0.247806375574934 0.248766448710880 0.231101989867599 0.240391824519834 0.230531699974816 0.229972679244758 0.230762572308215 0.230039343427967 0.228256109761729 0.236572816672669 0.234151985806709 0.234698673722144 1 1|0 -|/ 9971060 9971293 9971158.444 9969428 9971504 - gene protein_coding_gene FALSE TRUE AT1G28395.1|AT1G28395.2|AT1G28395.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G33847.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89009.1) -1.21507739106566 -8.7242884490712 3.06272807094452e-06 0.0462870093361845 9.30419214704394 8.76710145429454 -1.21507739106566 0.186829576753427 AT3G05130_at 3.89971075104451 4.17733055770236 4.54727343683387 4.23339230296697 5.31419975129012 4.81240450572493 3.35226558407164 3.08261291573991 4.06983909543549 2.820155858224 4.11020042565475 4.66897670573435 3.99262759444676 3.68202677085133 4.35116294130182 3.2397537558667 4.24816322079074 3.84687862341468 2.70869722024229 0.235086153592073 0.244988602062171 0.235086153592073 0.242545544165791 0.245641926890128 0.266633514754269 0.24714138179419 0.240204297420512 0.239578900737208 0.243046599941414 0.236555407240092 0.235086153592073 0.242064492928126 0.235086153592073 0.240569201358988 0.239178648261884 0.249587965713692 0.242080185872988 0.243737371711554 3 3 - 1433527 1433998 1433711.6 1433481 1435385 - gene protein_coding_gene FALSE TRUE AT3G05130.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27330.1); similar to Viral A-type inclusion protein repeat [Entamoeba histolytica HM-1:IMSS] (GB:XP_653447.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 0.958373621927374 8.72265269915043 3.06825996297981e-06 0.0463675445605509 9.3029920881389 7.78591763203424 0.958373621927374 0.122380993027097 AT2G47130_at 6.74864644012291 6.97172082063813 6.84545871908082 7.30523660394473 4.66801815559776 5.02809025824536 2.03492226082759 2.22074028924513 3.3754770533653 1.72830132901988 2.21141489129571 3.14608255535319 2.18484203310612 3.21720098348099 2.51116390184347 3.08862644565691 2.84952648872802 3.22488107418434 2.16880532869788 0.369279112092789 0.369834826531375 0.389269843601406 0.383967796636213 0.34256162627168 0.347013071185477 0.339500213276727 0.346028127603001 0.339500213276727 0.345415393758404 0.344572402849711 0.339500213276727 0.339573073141694 0.339500213276727 0.346786509371302 0.339500213276727 0.339500213276727 0.342583051690324 0.344906409583583 2 2 - 19356718 19357166 19356954.364 19356606 19357609 - gene protein_coding_gene FALSE TRUE AT2G47130.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G29260.1); similar to 3-beta hydroxysteroid dehydrogenase [Di (GB:AAV68714.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.9238581039269 8.71072299173238 3.10893252464841e-06 0.0469790793799622 9.29423023844387 7.84206012699636 0.9238581039269 0.112862709585879 AT1G75390_at 2.93840437253555 2.93910163749812 3.99081298096513 4.25663013133291 3.97718213009558 4.22745124017618 2.84760220736136 2.97799069230982 2.39168554020683 2.42556055024764 2.58391390570795 2.39504391399229 2.02886958027298 2.95047513836761 3.127238201172 3.40619706771181 3.85649796375354 2.67657210767229 2.64422180213526 0.193928938074155 0.194544038135736 0.191696774066562 0.190321240595645 0.212912962057002 0.200659911525962 0.199443304536474 0.192885153302076 0.193746081553640 0.186216981521598 0.198647555359169 0.189385745474644 0.197644447016345 0.189822301073109 0.203633487791841 0.196228939153013 0.206561810916461 0.198730992346535 0.200623629558782 1 1 + 28295921 28296372 28296143.182 28295426 28296669 + gene protein_coding_gene FALSE TRUE AT1G75390.1|AT1G75390.2 bZIP transcription factor family protein similar to GBF6 (G-box binding factor 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to bZIP transcription factor bZIP124 [Glycine max] (GB:ABI34666.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)|similar to GBF6 (G-box binding factor 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to bZIP transcription factor BZI-2 [Nicotiana tabacum] (GB:AAK92213.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.789094706925484 8.70310908238098 3.13519520892186e-06 0.0473727996068093 9.28862923754579 6.20202539854827 0.789094706925484 0.0670896637063234 AT4G39090_at 12.8911588672841 13.0737093874914 13.3464348548221 13.3697613593665 13.5374544761891 13.4257617460898 12.4977685978409 12.3217315950832 11.7140877841509 12.0877750360855 12.4822773498584 12.4488889980392 12.9346363157010 12.5558414770619 12.0349037914288 12.6486948699558 12.8282130261649 12.7165817742553 11.6197104335261 0.0836675559147262 0.0811007627990366 0.084045512793314 0.085645117181612 0.0848121068840321 0.0837166582017741 0.0811007627990366 0.0812900672303213 0.0997873376242165 0.0824509332363452 0.0811519156222229 0.083175764610734 0.0811007627990366 0.0868145718681807 0.0848397893805437 0.0815269621448769 0.0908043268271303 0.0842210118858083 0.0826063255910136 4 4 - 18215975 18216645 18216182.909 18215550 18217476 - gene protein_coding_gene FALSE TRUE AT4G39090.1 RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Identical to Cysteine proteinase RD19a precursor (EC 3.4.22.-) (RD19) (RD19A) [Arabidopsis Thaliana] (GB:P43296); similar to cysteine proteinase A494, putative / thiol protease, putative [Arabidopsis thaliana] (TAIR:AT2G21430.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60581.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) 0.748912306456336 8.69567342671452 3.16107444805197e-06 0.0477606738356172 9.28315264918729 25.2521955029687 0.748912306456336 0.0481244797374464 AT2G16990_at 7.6477294854904 7.4063211936791 7.91860756330568 7.76736739173391 8.26116959789695 7.86771113980604 8.07306631803711 7.65933897466043 5.16195925357624 6.0244462918105 7.21640143843324 6.90476046876015 7.78012864707138 6.98041305849743 6.72585754447522 7.14480419682314 8.02964180961025 6.96593424482573 5.75703708400172 0.195442511271553 0.193917385251948 0.195353534635896 0.196123074192936 0.194992469426731 0.19425646670446 0.193453915033025 0.192102139398881 0.227335464811114 0.207773380383034 0.192102139398881 0.192102139398881 0.192102139398881 0.198111205937758 0.193777418781014 0.192102139398881 0.192557268212592 0.208135004161818 0.203614243568670 2 0|2 /|+ 7393668 7394798 7394233.75 7390117 7394936 + gene protein_coding_gene FALSE TRUE AT2G16990.1|AT2G16990.2 tetracycline transporter| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16980.2); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE80432.1); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.913889198242399 8.69454180377422 3.16503316341754e-06 0.0478173210329122 9.2823185918331 14.2583174010053 0.913889198242399 0.110420731798132 AT1G04310_at 1.86926034404359 1.70645425476162 1.79089980944258 1.78994584974006 1.76484934206382 2.08512053647677 1.84903016654355 1.70497425726972 2.99147694432845 2.47829211724942 4.11215035826545 4.55739001513625 3.45664642199433 3.73831593400691 4.46202858711028 4.16662220268291 4.65307406380597 4.11586458114788 2.50542862422643 0.234194551208136 0.232785231940352 0.238626769823183 0.235145848263985 0.237459413092399 0.229981102327782 0.229981102327782 0.241869171129558 0.229981102327782 0.229981102327782 0.232234271282195 0.239846008495716 0.233343709463573 0.236148859777796 0.246830172872510 0.245784762263320 0.232328956848184 0.242900542851413 0.229981102327782 1 1 - 1155186 1155762 1155480.182 1154763 1157710 - gene protein_coding_gene FALSE TRUE AT1G04310.1 ERS2 (ETHYLENE RESPONSE SENSOR 2); receptor encodes an ethylene receptor related to bacterial two-component histidine kinases. similar to ETR2 (ETHYLENE RESPONSE 2), receptor [Arabidopsis thaliana] (TAIR:AT3G23150.1); similar to ethylene receptor [Pyrus pyrifolia] (GB:BAD61003.1); contains InterPro domain Histidine kinase A, N-terminal; (InterPro:IPR003661); contains InterPro domain GAF; (InterPro:IPR003018); contains InterPro domain Plant inhibitor of proteinase and amylase; (InterPro:IPR011052) 0.787318210346752 8.68620642778184 3.1943580062971e-06 0.0482571664011303 9.2761702975881 5.2281471946028 0.787318210346752 0.0669863455984682 AT2G40110_at 6.2588976966706 6.32514584632976 6.17341726429688 6.04798479998117 6.92451958481818 6.58313554364495 3.70894039032765 3.57173765756805 4.49813311763354 4.64161633070449 4.19950216041488 5.09804359060469 4.88968340999537 5.0002222112151 4.13319216553803 5.24191403969961 5.03199826563302 4.49639873259158 4.80758102022386 0.201702267385538 0.197931876343958 0.197357817273507 0.202649179979121 0.205692277811628 0.200896806485253 0.199797701348675 0.203524122784608 0.198610990690606 0.194413091035338 0.197885067364230 0.192992376045281 0.192159669689467 0.199512707574135 0.200621823624031 0.190607070617283 0.221379218830674 0.190607070617283 0.194356545813531 2 2|0 +|/ 16755242 16756370 16755829.375 16755018 16756623 + gene protein_coding_gene FALSE TRUE AT2G40110.1|AT2G40110.2 yippee family protein similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT3G11230.2); similar to Protein yippee-like (GB:P59234); contains InterPro domain Yippee-like protein; (InterPro:IPR004910)|similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT3G08990.1); similar to Protein yippee-like (GB:P59234); contains InterPro domain Yippee-like protein; (InterPro:IPR004910) 0.789171533117758 8.67383776244785 3.23841455901933e-06 0.048919490328546 9.26703157421248 10.4044620870291 0.789171533117758 0.0682392467040646 AT4G21980_at 9.0194770891357 9.02802845606658 9.55524133994697 9.43273598618847 9.5282087005421 9.12674831110543 7.91202155008914 7.5486814542241 7.30446103238293 7.0831374942108 8.03782670763762 7.73295373443366 8.13237349637407 8.23168534178829 7.64901659187979 8.18726248920095 7.82802981850208 7.79206579228399 7.37103726675845 0.220803245495960 0.220134894024354 0.226918251805968 0.223036673621655 0.228266821032949 0.238170415898917 0.212385296516061 0.217630840924111 0.245229345104079 0.218217947614954 0.214598585642474 0.209539893556411 0.218444315023841 0.218218334870697 0.217708126042046 0.209557995346214 0.22418920037706 0.224277435446438 0.21243703057719 4 4|0 +|/ 11655932 11656725 11656425 11655601 11657046 + gene protein_coding_gene FALSE TRUE AT4G21980.1|AT4G21980.2 APG8A (autophagy 8A) Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation. similar to ATG8B (AUTOPHAGY 8B), microtubule binding [Arabidopsis thaliana] (TAIR:AT4G04620.2); similar to microtubule-associated protein 1 light chain 3 [Gossypium hirsutum] (GB:AAQ76706.1); contains InterPro domain Light chain 3 (LC3); (InterPro:IPR004241) 0.864852297897682 8.66593904841802 3.26689244133442e-06 0.0493464103263564 9.26118587012806 16.4947830330606 0.864852297897682 0.0960830845293389 AT1G14380_at 7.68503318293773 7.5754293203959 7.6510508283431 8.07686707526688 9.45134058015347 9.05876003208282 7.50693407538518 7.18248946723885 8.7614515900661 7.9611319493913 9.5937718805033 8.86990895775422 8.80735151104938 9.27874871332765 9.1401167492769 9.05944022208074 8.4489475898934 8.97529725928915 7.97061912649517 0.153548884073367 0.152295151131015 0.160665991976334 0.154920158548999 0.153184314053906 0.150792599707252 0.151041404805682 0.159869728413123 0.14947509610001 0.153411746587194 0.147143430674651 0.147143430674651 0.148328760666842 0.148957409369864 0.147143430674651 0.147143430674651 0.151143888887191 0.156235483860120 0.147143430674651 1 1 - 4918418 4918874 4918603.091 4918005 4921591 - gene protein_coding_gene FALSE TRUE AT1G14380.1|AT1G14380.2|AT1G14380.3 IQD28; calmodulin binding similar to IQD29 (IQ-domain 29), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G02790.1); similar to IQ calmodulin-binding re (GB:ABE84487.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.931331711275738 8.6658554414368 3.26719531913534e-06 0.0493477181002202 9.2611239537329 16.6498707780827 0.931331711275738 0.116438435349512