ID expr.6.4.exp_090507.CEL expr.6.4.exp_150607.CEL expr.6.5.exp_090507.CEL expr.6.5.exp_150607.CEL expr.6.7.exp_1_040507.CEL expr.6.7.exp_150607.CEL expr.7.2.exp_1_040507.CEL expr.7.2.exp_150607.CEL expr.6.4.3_exp160807.CEL expr.6.4.4_exp160807.CEL expr.6.5.11_exp160807.CEL expr.6.5.2_exp160807.CEL expr.6.5.6_exp160807.CEL expr.6.5.8_exp160807.CEL expr.6.7.19_exp160807.CEL expr.6.7.20_exp160807.CEL expr.6.7.21_exp160807.CEL expr.6.7.22_exp160807.CEL expr.7.2.1_exp160807.CEL se.expr.6.4.exp_090507.CEL se.expr.6.4.exp_150607.CEL se.expr.6.5.exp_090507.CEL se.expr.6.5.exp_150607.CEL se.expr.6.7.exp_1_040507.CEL se.expr.6.7.exp_150607.CEL se.expr.7.2.exp_1_040507.CEL se.expr.7.2.exp_150607.CEL se.expr.6.4.3_exp160807.CEL se.expr.6.4.4_exp160807.CEL se.expr.6.5.11_exp160807.CEL se.expr.6.5.2_exp160807.CEL se.expr.6.5.6_exp160807.CEL se.expr.6.5.8_exp160807.CEL se.expr.6.7.19_exp160807.CEL se.expr.6.7.20_exp160807.CEL se.expr.6.7.21_exp160807.CEL se.expr.6.7.22_exp160807.CEL se.expr.7.2.1_exp160807.CEL Chr ChrList StrandList From.Min From.Max From.Mean start end strand type Note isChr5 isClean IDlist Short.description Currator.summary Description logFC t P.Value adj.P.Val B A M M.se hlSymb hlCols AT5G13930_at 3.09944572301999 3.36867923834480 2.32383926550853 2.11702641830610 1.77483795882963 2.00861115423344 9.67082782074494 10.1024350844910 8.61208096353118 9.17755047959627 7.08351846326754 9.02512934207427 3.45007011868116 6.36008815822974 8.83192281455309 6.08976083354929 3.38718791330455 5.75980862736084 8.2329886885694 0.337477760358831 0.334558873016972 0.356201823792234 0.350888405825822 0.359924370125840 0.370107829620834 0.333847469740514 0.333243907388479 0.341969445220227 0.333007693121797 0.332349991621826 0.332286127846713 0.338596899238924 0.332035741417653 0.330930904040266 0.336925578931195 0.347302505176225 0.337704016188385 0.339864043333196 5 5 + 4489533 4490004 4489752.636 4488690 4490266 + gene protein_coding_gene TRUE TRUE AT5G13930.1 CHS (CHALCONE SYNTHASE); naringenin-chalcone synthase Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. Identical to Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) (TRANSPARENT TESTA 4 protein) (CHS) [Arabidopsis Thaliana] (GB:P13114;GB:Q43132;GB:Q940L6;GB:Q941R9); similar to chalcone and stilbene synthase family protein [Arabidopsis thaliana] (TAIR:AT4G34850.1); similar to chalcone synthase [Halimolobos perplexa var. perplexa] (GB:AAF23569.1); similar to chalcone synthase [Arabis fendleri] (GB:AAF23565.1); similar to chalcone synthase [Capsella rubella] (GB:AAF23581.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) -4.48507857319755 -44.1335806077677 2.42695476674044e-13 1.16251133326867e-09 15.0197507123133 11.7695340801564 -4.48507857319755 0.103282319779167 1 1 AT5G48900_at 7.44860946052577 7.76787855361145 3.13172336620234 3.33978611962973 3.53139212348504 3.55960979494557 9.10090574594247 9.0764909694055 8.68736278194393 8.774421035492 9.25417141373567 10.2158610555911 9.35589233070234 8.89008280245618 10.0219984348889 9.26028086425271 6.98517370699792 9.27584586077063 9.7813515285682 0.194242648955921 0.195667842116667 0.215600967169476 0.207135089606986 0.205956775281655 0.219566401616521 0.190008267526523 0.192879144219964 0.192266146682974 0.193762003827435 0.190008267526523 0.192540613107318 0.190008267526523 0.19041589104666 0.194990945251636 0.190305971062872 0.209000953099424 0.192421658697408 0.190008267526523 5 5 + 19845304 19846108 19845828.273 19842363 19846318 + gene protein_coding_gene TRUE TRUE AT5G48900.1 pectate lyase family protein Identical to Probable pectate lyase 20 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q93WF1;GB:Q8LDB4;GB:Q9FI81); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G24670.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G13210.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G07010.1); similar to pectate lyase [Fragaria x ananassa] (GB:AAK66161.1); similar to ripening-related pectate lyase [Man (GB:AAX88800.1); similar to pectate lyase B [Fragaria x ananassa] (GB:AAK66160.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -3.42350288385476 -38.3842460596628 1.05379443678598e-12 5.04662155776804e-09 14.8975751425065 14.9887787287230 -3.42350288385476 0.0662632570616535 2 2 AT5G60610_at 0.47193487041811 0.688018269584166 4.24062957569215 4.22536409461309 5.58717051661902 5.17055330005376 0.720959449774976 0.781845461405405 1.03699448949133 0.758594067593838 4.05851274524134 3.28383123783477 4.75574453292965 4.15852659599434 3.8829157044447 3.99697744133215 4.55421778302649 3.88404251769284 0.778331539177667 0.29954677370812 0.304003204741207 0.303697718850592 0.303856131894717 0.294141939412978 0.303733924239375 0.291778205703560 0.304299574874961 0.294854880549899 0.307284041725415 0.29790113383038 0.291938257436025 0.291906977013954 0.295246675186265 0.291778205703560 0.291778205703560 0.303849956619557 0.296482659744897 0.309604462758001 5 5 + 24381851 24382575 24382121 24380817 24382754 + gene protein_coding_gene TRUE TRUE AT5G60610.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G26860.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE78248.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 3.37189297866038 35.8766523239153 2.14303423209909e-12 1.02608479032904e-08 14.8264041824527 5.20071915988657 3.37189297866038 0.0819413525882631 3 3 AT5G24470_at 10.7571532265792 10.8836709072374 10.7497195710861 10.6958660080735 11.7220710777589 11.4320229187142 5.18287687902041 5.01199791446558 4.33535175693041 3.10749041503632 7.36364166390188 7.82243771702625 7.42433341542747 8.29731181890888 7.25517514963212 6.45867413434506 7.64667743477548 7.11556724275924 2.98810060819448 0.324507023440168 0.325627787489842 0.324790715410429 0.324366628240032 0.329027873993121 0.327694081493219 0.323258703320552 0.315115446670247 0.342864973621369 0.338106906385165 0.323222812378649 0.31872196745625 0.314068927010782 0.314936354452093 0.316513494786742 0.315583830701753 0.322985943081892 0.331813982193778 0.343187346813134 5 5 - 8356230 8356862 8356634.364 8355954 8358876 - gene protein_coding_gene TRUE TRUE AT5G24470.1 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Identical to Two-component response regulator-like APRR5 (Pseudo-response regulator 5) (APRR5) [Arabidopsis Thaliana] (GB:Q6LA42;GB:Q9FGE3); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to pseudo-response regulator 95 homologue [Lemna paucicostata] (GB:BAE72699.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 2.58672733035128 29.3037629071092 1.78804324897566e-11 8.55936303284649e-08 14.5550568914734 15.0044014372756 2.58672733035128 0.0629297015174308 4 4 AT5G62360_at 11.0292364077358 11.1407589789803 10.4285717300907 10.5164332416279 11.8739783777667 11.7544467663919 6.09366406826987 5.47718533359317 5.52507638270376 4.94070747842891 10.3030647577165 10.1976792221581 9.77980143801336 10.2836787202326 9.85148293171796 10.7925883926414 9.19747054670967 9.65482522359098 4.32977635292743 0.193576234331100 0.187991177744669 0.196415454662793 0.187991177744669 0.196485865983776 0.198642133879920 0.233688091768486 0.239347734071791 0.228871328709853 0.249217750914306 0.187991177744669 0.187991177744669 0.193804800401371 0.191440910368760 0.187991177744669 0.192885047498908 0.200204830832159 0.194854778952713 0.222719896290017 5 5 + 25058060 25058510 25058216.455 25057882 25058687 + gene protein_coding_gene TRUE TRUE AT5G62360.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 3.06741188691311 29.2630198683195 1.81426096289415e-11 8.68305296841141e-08 14.5528471288911 17.2589980174492 3.06741188691311 0.111414249112433 5 5 AT5G42180_at 1.21278612454865 0.840716251833278 6.1382949742135 6.42611058075773 4.73657499210234 4.46267417779029 1.05528790631285 1.1299005861138 1.20876613873187 1.56125379901612 1.73120194312101 1.21368949179264 4.29649081210713 3.73473342888427 1.00417437205799 3.26319340246071 8.59577672574673 2.45410933050201 1.37827225266306 0.347465884557932 0.351876647788996 0.364115444658019 0.354072985980592 0.35482859673894 0.352453370286268 0.345511992766652 0.345511992766652 0.351620101504008 0.355303688920618 0.345782171686668 0.348254079713129 0.352466042879166 0.352559732172413 0.345511992766652 0.345511992766652 0.372102134500147 0.345511992766652 0.346498266020685 5 5|0 +|/ 16870382 16871097 16870861.111 16869858 16871452 + gene protein_coding_gene TRUE TRUE AT5G42180.1 peroxidase 64 (PER64) (P64) (PRXR4) Identical to Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) (PER64) [Arabidopsis Thaliana] (GB:Q43872); similar to peroxidase [Arabidopsis thaliana] (TAIR:AT5G51890.1); similar to peroxidase [Striga asiatica] (GB:ABE66389.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 2.77823440265155 28.1904632465289 2.68094433608726e-11 1.28283186481775e-07 14.4915822144914 5.58501082511126 2.77823440265155 0.0950797225610572 6 6 AT5G18670_at 3.50391599405539 3.96067445112727 3.16662472133112 3.48966025838318 3.11978461979407 3.09652429721134 6.56467577901281 6.90197857498299 6.72903782161662 6.85955582403824 4.74512429024397 4.58911138859817 4.51777061893542 4.82204469125081 4.39626287682150 6.32429666529723 5.05527519145082 4.97430570589577 6.92006095604967 0.227959309368675 0.227932729885303 0.224393829013893 0.228750457381947 0.231869208946579 0.235600618944119 0.222814500551962 0.223394784325454 0.231383483186709 0.237437899191982 0.229372306210144 0.222814500551962 0.223790912842886 0.224252449575347 0.232226165775083 0.227231260528885 0.234354523555881 0.231021460348456 0.231745141463686 5 5 + 6227431 6227967 6227733.636 6225958 6228134 + gene protein_coding_gene TRUE TRUE AT5G18670.1 BMY3 (beta-amylase 3); beta-amylase putative beta-amylase BMY3 (BMY3) similar to CT-BMY (BETA-AMYLASE 8), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G17090.1); similar to beta-amylase [Glycine max] (GB:CAI39245.1); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) -2.89599971917764 -27.4472933973144 3.54429017237214e-11 1.69558841846283e-07 14.4453634452501 10.1076009015522 -2.89599971917764 0.113121965295774 7 7 AT5G05890_at 4.20213684927077 4.20288636947733 3.09051645454058 2.89977811486471 3.23682798325732 3.05249861735209 5.97686414203613 6.09564604272065 4.45123553439114 5.42818595737364 3.70426017162021 3.64570786027873 4.19174265915141 4.4751219476877 3.81757480486212 3.76821994302685 4.26129320261327 3.83605307565174 4.81393104669676 0.253638613274916 0.251113570795950 0.259967982316063 0.263124021086020 0.255253467172314 0.252821484321991 0.283840206998538 0.272988466489785 0.251113570795950 0.256859980513657 0.251260855109851 0.251113570795950 0.25157656767856 0.251113570795950 0.256657833203288 0.251333927170171 0.252797293131729 0.264613996288351 0.255887659310782 5 5 + 1773455 1773959 1773619.364 1772544 1774114 + gene protein_coding_gene TRUE TRUE AT5G05890.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05900.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -2.29250263934658 -26.9216439883324 4.33742331005197e-11 2.07458956919786e-07 14.4106239698024 8.52478476548929 -2.29250263934658 0.0502955718748335 8 8 AT5G67480_at 8.81876619350765 8.763141102903 9.6232824702716 9.64956235519845 9.8117187350077 9.576647497577 5.07732546687054 5.3147989974435 7.72730227572033 5.08159870824778 10.2928366098068 8.95248953916347 8.79831324781676 9.89700373493947 9.08335681177646 8.92818805961064 8.06960677645495 9.32164625948246 3.66957016752449 0.156252351953723 0.155554814704337 0.160960916969826 0.155554814704337 0.161013790899373 0.164031634606082 0.184804956628814 0.203279698262291 0.192990204020428 0.180602951725731 0.15995786919407 0.155554814704337 0.159647041962378 0.156370925846118 0.162345722728574 0.155554814704337 0.162138800947177 0.155554814704337 0.178749442370136 5 5 - 26948406 26948910 26948585.818 26948165 26950319 - gene protein_coding_gene TRUE TRUE AT5G67480.1|AT5G67480.2 BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator|BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding similar to BT5 (BTB and TAZ domain protein 5), protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT4G37610.1); similar to Zinc finger, TAZ-type; BTB/POZ [Medicago truncatula] (GB:ABE77424.1); contains InterPro domain Zinc finger, TAZ-type; (InterPro:IPR000197); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 2.23180667987141 25.5973352174667 7.3416954572471e-11 3.51079876765556e-07 14.3147087868369 15.6597822758702 2.23180667987141 0.058797075457741 9 9 AT5G63180_at 9.56642419005597 9.85791908060948 4.12932826198402 4.54225399908764 8.10032854185563 7.80268176060606 10.2159110552912 10.3823852820264 10.2711099158121 10.3756623777726 10.7172746819967 11.6576935036754 10.3633746141869 10.6185409208634 11.2756183848359 10.9567198475841 8.89672653367361 10.5638625144385 10.7243884954419 0.135317784981752 0.129882531475144 0.163552272178738 0.176451978883824 0.135060474445621 0.145512467700610 0.132564606325519 0.131884233861212 0.137919728553076 0.128838997995457 0.128838997995457 0.128838997995457 0.128838997995457 0.128838997995457 0.130896025361278 0.128838997995457 0.142099584598210 0.133794345331782 0.128838997995457 5 5 - 25358340 25359365 25358649.182 25358180 25360345 - gene protein_coding_gene TRUE TRUE AT5G63180.1 pectate lyase family protein Identical to Probable pectate lyase 22 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q93Z25;GB:Q9FMK5); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G24780.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT1G67750.1); similar to pectate lyase [Gossypium hirsutum] (GB:AAY85180.1); similar to pectate lyase [Malus x domestica] (GB:AAQ84042.1); similar to Pectate lyase [Prunus mume] (GB:BAE48664.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -2.5807463790367 -25.1805021365126 8.71204079368356e-11 4.16522670346011e-07 14.2817802793226 18.6187940071891 -2.5807463790367 0.105518541229286 10 10 AT5G62165_at 2.65050489089711 2.51935642883721 2.40089644801384 2.15043011724454 1.33535252532466 0.905684962478042 6.91846145261234 6.86279021364634 3.5490267815647 0.995274120693872 0.815448818931753 0.624181224657431 0.653105656080934 0.864339511877429 0.427377121000591 1.43857679602699 0.949593106641117 0.857205757804708 1.30932557911332 0.293403784374536 0.305413878844172 0.289551528624131 0.289306859082236 0.289306859082236 0.289306859082236 0.321561098492798 0.325203865296037 0.304894150850603 0.292765811356650 0.289306859082236 0.289306859082236 0.302808902843057 0.291739019150867 0.292064817694492 0.289306859082236 0.289322267534589 0.296748219872807 0.290183521354473 5 5|0 +|/ 24982400 24985624 24983762.778 24981926 24985746 + gene protein_coding_gene TRUE TRUE AT5G62165.1|AT5G62165.2|AT5G62165.3 AGL42 (AGAMOUS LIKE 42); transcription factor Encodes a MADS box transcription factor. Expressed in quiescent center. similar to AGL20 (AGAMOUS-LIKE 20), transcription factor [Arabidopsis thaliana] (TAIR:AT2G45660.1); similar to MADS-box protein [Vitis vinifera] (GB:ABF56527.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -2.31162189447598 -23.9380219057174 1.47554180347376e-10 7.05308982060459e-07 14.1747661773171 4.60790329300755 -2.31162189447598 0.0895291246641745 11 11 AT5G59320_at 9.912217136731 9.94743397927033 13.1110722407403 13.1983238306972 13.6779537409228 13.7557170661492 13.0316864217597 12.9102712849222 9.19573411246882 11.2413216582939 11.6748265577845 8.38382407317743 11.5649607886042 11.8202393732929 13.1234011019407 12.6361819266668 13.8807231143630 14.1829030812639 7.65787804854878 0.117841895520754 0.115313163354335 0.113731383330438 0.111949228185197 0.117354533389022 0.119008252766400 0.112811485936201 0.111287923181893 0.127574651589184 0.110291390230067 0.109223875736701 0.114527848118226 0.110904739290113 0.110642069055974 0.109223875736701 0.109223875736701 0.116530846604648 0.110807320310462 0.131855952422072 5 5 + 23946293 23946588 23946432.727 23946197 23946970 + gene protein_coding_gene TRUE TRUE AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding lipid transfer protein 3 Identical to Nonspecific lipid-transfer protein 3 precursor (LTP 3) (LTP3) [Arabidopsis Thaliana] (GB:Q9LLR7;GB:Q9FIE6); similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.85762599102029 22.8129845402693 2.43379530792101e-10 1.16311077765545e-06 14.0648805634949 23.2047646836027 1.85762599102029 0.0297944833639835 12 12 AT5G57785_at 5.78309183901304 5.98587828104411 8.21100420101432 8.63304994696253 9.08817959925966 8.8033820017665 4.8938388130743 5.23324595478579 3.71653649238008 5.23199772912976 7.6900274253351 7.76278833701045 8.48846890492238 8.2853281719007 7.43205799952313 7.92700359312568 9.02077060054065 8.16408407813675 4.84203064753006 0.312625949277707 0.30658249858449 0.305667999129311 0.306955462958348 0.311048334229248 0.309891758555229 0.321868901676277 0.317933283363671 0.361000489817476 0.309638510479166 0.305836693778489 0.301805336187630 0.303182605192305 0.302784864244465 0.301805336187630 0.304206431822645 0.308470791682448 0.304581728849336 0.316217845452296 5 5 - 23426354 23426526 23426435.818 23426122 23426648 - gene protein_coding_gene TRUE TRUE AT5G57785.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 2.31118851996919 22.0366279018423 3.48632467267707e-10 1.66576592860510e-06 13.9807409297573 13.4255443771943 2.31118851996919 0.111556764202032 13 13 AT5G17300_at 6.48024879295034 6.65838999914178 7.18141528139174 7.49329373043185 7.31781041159439 7.66000262537167 9.25010248234447 9.27432818110532 7.60659445767084 7.97458976507949 4.38179330020048 5.57347916841819 7.54050614360823 6.39369559449431 3.73930943300037 8.63387436547872 8.63369465656072 5.13266420629994 8.22155371698386 0.187417217565256 0.180765812205752 0.178212707582523 0.174005862491960 0.174966035925148 0.174855544885429 0.178251481389208 0.174107358080112 0.181178316789113 0.177820800014509 0.18092338054579 0.173955469668217 0.173042170234764 0.179817195143029 0.186341177166773 0.169418433308285 0.175986652289019 0.180449777406912 0.169418433308285 5 5 - 5690439 5690837 5690682.182 5690229 5692904 - gene protein_coding_gene TRUE TRUE AT5G17300.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G37260.1); similar to putative At5g37260 [Lycopersicon peruvianum] (GB:AAX44338.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -2.08887302098912 -21.9119658296294 3.69761953679855e-10 1.76635285272867e-06 13.9665355949454 14.7583854822510 -2.08887302098912 0.0859517154552735 14 14 AT5G39660_at 5.2887696169259 5.64279984270544 5.04116610507743 5.01710260103566 4.97940777367126 5.16316579514959 6.49752040478903 6.38071614453835 5.67277835059371 5.83226882245388 4.58923589349658 4.81830360404301 4.88862656854353 4.6931971307449 4.3269530071534 5.97372898216654 6.09097367843038 4.66299495189965 6.65506301289503 0.224317494886122 0.218624690321897 0.230652293286985 0.221444581118399 0.218624690321897 0.222649717464235 0.221941751246235 0.224872211446487 0.226013802794359 0.226235598645635 0.222382930591335 0.220095690982160 0.218624690321897 0.231633082219583 0.252490530544579 0.224796912061707 0.226775936592974 0.232479009652009 0.230855190718069 5 5 + 15897402 15897902 15897635.818 15895927 15898272 + gene protein_coding_gene TRUE TRUE AT5G39660.1|AT5G39660.2 CDF2 (CYCLING DOF FACTOR 2); DNA binding / protein binding / transcription factor|CDF2 (CYCLING DOF FACTOR 2); DNA binding / transcription factor Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. Identical to Dof zinc finger protein DOF5.2 (AtDOF5.2) (DOF5.2) [Arabidopsis Thaliana] (GB:Q93ZL5;GB:Q9FK95); similar to CDF3 (CYCLING DOF FACTOR 3), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47500.1); similar to Zinc finger, Dof-type [Medicago truncatula] (GB:ABE80370.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -1.96020508041890 -21.5715701191116 4.34927855922467e-10 2.07721543988570e-06 13.9267086126461 11.0307669300069 -1.96020508041890 0.0720470230311884 15 15 AT5G35735_at 9.96987327525456 10.0459283197204 11.1282192488574 10.9630265379673 10.9279306336640 10.5958401783033 5.68485797023033 6.13535574026724 6.4119972795028 6.03437580836003 9.35959726224227 8.84712810207425 8.70689121391081 9.17294189091477 8.60509513411762 8.05788407291506 7.70796928559468 8.82625864711133 4.23174438010977 0.257228563411439 0.25258540357583 0.255284768297912 0.256184993250206 0.255494175896406 0.261473350198823 0.259279596422597 0.270467684529363 0.289831100618216 0.271909328156344 0.252202505472181 0.252202505472181 0.256272907627474 0.25876124217784 0.261422123555308 0.252202505472181 0.261569941721001 0.268080081648086 0.268801521884524 5 5 - 13918182 13918637 13918428.545 13917982 13920227 - gene protein_coding_gene TRUE TRUE AT5G35735.1 auxin-responsive family protein similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G47530.1); similar to putative membrane protein [Solanum tuberosum] (GB:CAC37356.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 2.14910620008328 21.2629510185890 5.04963225540775e-10 2.4111994019572e-06 13.8892353028863 16.5413005832502 2.14910620008328 0.101838709001291 16 16 AT5G35480_at 5.85327884083931 6.44711261453883 5.64279153224221 5.95574256799317 5.77570082581518 5.50130292165897 7.30948285282196 7.51839374546727 7.55926523016466 7.66084500747753 6.07524221775498 5.365152798699 6.15403849846949 6.38118825131148 5.32904294515821 6.96377595149048 6.95034761559789 5.51682036843883 7.76179222675916 0.218856414748341 0.220239503289623 0.221828908480527 0.219500299884553 0.216796718793012 0.230346129797386 0.223526427501921 0.225880713074979 0.230676741602957 0.21993181161254 0.222194908775342 0.218368523845286 0.223452390242784 0.223519639371952 0.253586724280581 0.224635290790211 0.226788619443430 0.221252199812188 0.228675667952374 5 5 - 13706674 13706759 13706709.455 13706434 13706788 - gene protein_coding_gene TRUE TRUE AT5G35480.1 unknown protein -2.36191265260100 -20.9233666718096 5.9656578030148e-10 2.84800503515927e-06 13.8464290609269 13.1267683555049 -2.36191265260100 0.130597794545355 17 17 AT5G54960_at 9.89666256380962 10.033007818192 11.1758310480982 11.2164376518302 11.486638778104 11.2958953590993 8.16063314567683 8.08121456340308 7.3066789145754 7.64019939068447 9.93099867150212 9.39482090273112 9.5753693763478 9.85658717339092 9.31056239958707 9.97351358551429 10.1917483134485 9.8099587792837 6.17338420041754 0.149552422941730 0.149642069475308 0.158878893558211 0.154505710550093 0.155340684506766 0.156327948946348 0.155446066463334 0.159394703231749 0.175615850263210 0.169094380672421 0.149552422941730 0.149552422941730 0.152267433403102 0.149552422941730 0.152466260820842 0.150483116698333 0.153658652469283 0.158962989288171 0.184339771513676 5 5 - 22328115 22328628 22328427.636 22327913 22329987 - gene protein_coding_gene TRUE TRUE AT5G54960.1 PDC2 (PYRUVATE DECARBOXYLASE-2); pyruvate decarboxylase pyruvate decarboxylase-2 similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G33070.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAG13131.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain Pyruvate decarboxylase/indolepyruvate decarboxylase; (InterPro:IPR012110); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766) 1.74335059582733 20.8259337056485 6.26092437064982e-10 2.98833920211116e-06 13.8338315921975 18.5660563170857 1.74335059582733 0.0434119921890824 18 18 AT5G22460_at 3.16297881075178 3.10412583016740 4.42732329350259 4.67910019313942 4.09502715469487 4.33184404633853 3.461932789952 3.59007012838623 3.25013583537813 3.07589102771596 8.39590954360742 8.36998269402253 6.23890119724129 7.45288225277613 9.06709181568305 7.77444965086288 6.01722109718409 8.31884795028983 3.93541971911254 0.260078856732366 0.254230121934947 0.259793991668059 0.253880941651677 0.256753103359555 0.262079801478584 0.256556118107785 0.257240961366084 0.274636931281839 0.257301899834649 0.257734608490454 0.259239363616250 0.262587465244379 0.263696801243613 0.254581029793563 0.256857845691893 0.260888279491860 0.255687336388209 0.258868462706733 5 5|0 -|/ 7443705 7444414 7444020 7443511 7445549 - gene protein_coding_gene TRUE TRUE AT5G22460.1|AT5G22460.2 esterase/lipase/thioesterase family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G74280.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G36290.1); similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74300.1); similar to Os12g0152100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066173.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95828.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 1.78533844020699 20.1213795335346 8.9371843628467e-10 4.26482437795045e-06 13.738305166131 9.41899676550524 1.78533844020699 0.06460218869459 19 19 AT5G20630_at 9.9036879242457 10.3426610195688 0.407355801422373 0.723917738182595 5.94654693703036 6.0475477194696 4.81307502322885 5.17517827208363 2.84303748893312 3.36779993732706 6.78257791311751 9.33452829981518 4.61892161521082 5.19817220858041 8.63953209617795 5.93248413735878 1.06434597893714 3.82672787652604 4.97471013561626 0.333479639808602 0.334608645616651 0.362339586591491 0.353927233213402 0.324874285250903 0.330723707774979 0.32511249357824 0.324913016925434 0.329576858898155 0.329251225668622 0.331264208720494 0.326791011446421 0.328499396817854 0.326852318704930 0.328313212515424 0.329631242715099 0.343273977586879 0.330431512551259 0.330316598602932 5 5 - 6975357 6975829 6975601.545 6975106 6975995 - gene protein_coding_gene TRUE TRUE AT5G20630.1 GLP3 (GERMIN-LIKE PROTEIN 3); manganese ion binding / metal ion binding / nutrient reservoir Encodes a germin-like protein. Identical to Germin-like protein subfamily 3 member 3 precursor (AtGER3) (AtGLP2) (GER3) [Arabidopsis Thaliana] (GB:P94072;GB:P94028); similar to GLP1 (GERMIN-LIKE PROTEIN 1), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G72610.1); similar to Germin-like protein 1 precursor (GB:P45854); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) -2.10104707784065 -19.8431608509652 1.03195593774108e-09 4.92346177896268e-06 13.6983193714997 10.1215848642411 -2.10104707784065 0.114036163965737 20 20 AT5G63760_at 5.16270796851606 5.14347931339513 7.08073397718436 6.9877392079117 7.10116636058184 7.25140776388167 3.74488103323653 3.35094405539019 2.37137607309513 2.54779864118751 5.6136999720668 4.76015411089605 6.10647181691627 6.06571505522441 4.85048064219337 5.63176529189358 6.34640966411189 4.8676222234398 3.55177263136551 0.238729561471704 0.233282513203926 0.245571726904478 0.239978518528211 0.234884581885 0.236715113633757 0.239505277856214 0.234031175133135 0.250937740975128 0.246788092635929 0.233282513203926 0.235151983129206 0.239792292441577 0.241687313497024 0.242146955622191 0.233282513203926 0.241447199544064 0.238880301434758 0.239057411623604 5 5 - 25533118 25533869 25533558.2 25533104 25535059 - gene protein_coding_gene TRUE TRUE AT5G63760.1|AT5G63760.2 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to Zinc finger, RING-type; Zinc finger, RanBP2-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85988.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.80969085709881 19.7340714595970 1.09239497491963e-09 5.21072403036661e-06 13.6822715579771 9.9048519411666 1.80969085709881 0.0747901715113814 21 21 AT5G09440_at 7.64326034916878 8.36068901016098 10.7611568770137 10.9824141882550 11.0678153619523 11.1717051403661 6.29263555308362 6.69585530231149 3.86742032095519 5.28927441264743 8.04049624971101 6.06409902228196 8.54867411478178 8.24038427860308 5.27223283558273 7.66502498670789 7.99009235131094 7.8993571615968 4.89892348167961 0.283001028646020 0.281816697852954 0.302976717026858 0.304783847226832 0.304252726057668 0.301359536375567 0.281629627216584 0.278558018405031 0.323811064634257 0.294793697684265 0.278558018405031 0.286549550984244 0.287825321667669 0.282510455551085 0.299366503544367 0.278558018405031 0.293921766260824 0.282165231305650 0.314613563412934 5 5 + 2938649 2939154 2938844 2938348 2939462 + gene protein_coding_gene TRUE TRUE AT5G09440.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G64260.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 2.2942115099993 18.9614551215881 1.64913720950021e-09 7.8647353521065e-06 13.5622934397439 15.1970670712054 2.2942115099993 0.148569009608784 22 22 AT5G42760_at 3.14727261031277 3.05915849617458 4.90990120790223 4.86372411595948 3.53198483269868 3.43463593493102 7.13035262447341 6.92251591227432 4.2921803902538 4.98971993036163 3.46386676159863 3.30586312591686 4.39635727897801 3.94710442030106 3.56784409260733 5.6649717562486 4.90141129541446 3.57602799244941 4.64520720931296 0.251593039001078 0.237979983948128 0.231176213626646 0.235826870055218 0.231844564550013 0.234608973512068 0.248549614052462 0.24512847049448 0.237924123246524 0.239211855551362 0.234270321023094 0.231583794832938 0.232448764006192 0.239475740455321 0.236940315355063 0.234127528928349 0.241171344037346 0.233106300196287 0.239062102424960 5 5 + 17166789 17167297 17167088.636 17166151 17167514 + gene protein_coding_gene TRUE TRUE AT5G42760.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65019.1); contains InterPro domain O-methyltransferase, N-terminal; (InterPro:IPR003455); contains InterPro domain Protein of unknown function Mtu_121; (InterPro:IPR011610) -1.55592051032798 -18.5923152722354 2.01917518496160e-09 9.6274272818969e-06 13.5007988621274 8.99759322538185 -1.55592051032798 0.043287654288424 23 23 AT5G24160_at 7.70755603535134 8.14205120434125 9.568911585694 9.5798097715129 10.4036334102802 10.2460109177864 7.60742237690595 7.726283255709 4.63569175184284 5.62715513029529 8.26200352236031 7.54676442194498 8.76468337220823 8.72542902699662 7.70053824927642 7.63010958957712 8.77444713538535 8.71303010732791 4.86298099735749 0.213438456463959 0.210439393778670 0.207429889045735 0.206897727247149 0.208776173173958 0.207889229966524 0.208555954200896 0.213620834582521 0.232061725541192 0.233135736077156 0.207341484690576 0.209643043079766 0.208467151929125 0.206746611678731 0.211229084762551 0.207182630593928 0.208119918854239 0.204488258848249 0.225500628719421 5 5|0 -|/ 8183315 8184020 8183683.556 8183078 8186643 - gene protein_coding_gene TRUE TRUE AT5G24160.1 squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) Identical to Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene epoxidase 1,2) (SE 1,2) (SQP1,2) [Arabidopsis Thaliana] (GB:O65402); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 1.73822912791325 18.4511996967407 2.18383606698941e-09 1.04103465313385e-05 13.4765292161188 15.5259939720142 1.73822912791325 0.082610282685485 24 24 AT5G17760_at 5.60530953634399 5.55062857958923 7.99574204941981 8.29173413268386 5.70595868371024 6.06582543515686 2.19466249748676 2.20054494186330 1.70603041569879 1.67569052113703 3.24444044949381 3.39118290208577 3.45584702644867 3.06523572275323 2.57869344738071 3.04979732908188 3.47369105545384 4.03270798281149 1.36525493833867 0.288756702271889 0.291849604723919 0.284969814816765 0.283774698215710 0.288092721098906 0.294400128355713 0.283774698215710 0.283774698215710 0.284672044775354 0.302880591518676 0.283774698215710 0.283774698215710 0.288229310819128 0.286927058433775 0.283774698215710 0.283774698215710 0.283774698215710 0.288513577653701 0.295312839215215 5 5 - 5861298 5861752 5861510.182 5860423 5862424 - gene protein_coding_gene TRUE TRUE AT5G17760.1|AT5G17760.2 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959)|similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.68708043330096 17.9973021776002 2.82111310402687e-09 1.34454250537921e-05 13.3954618019940 7.8856881226135 1.68708043330096 0.0811956553328696 25 25 AT5G59680_at 6.67667358801139 7.00594581253468 7.0889191994146 7.0126565880357 6.37021312287382 6.33255946942066 3.74137630467607 3.587811514251 7.26217795004544 5.47595267247385 3.13459190163108 3.2731013136045 3.86636703653991 4.85306622189624 2.52622024395079 4.65085398322015 4.30457749355056 4.30197887724331 6.66896318819239 0.265825376238627 0.261911304251387 0.261598534336150 0.265731596549564 0.262542758298370 0.262448143510703 0.26745926427457 0.270314645715599 0.270343690345597 0.261598534336150 0.269546561980679 0.261598534336150 0.274898973775040 0.265251372125593 0.273369305392957 0.261598534336150 0.269554206617618 0.267367971314486 0.268154284204588 5 5 + 24067464 24067971 24067779.455 24064018 24068027 + gene protein_coding_gene TRUE TRUE AT5G59680.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59670.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90328.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.56905678690055 -17.685344065872 3.37590179021038e-09 1.60861720303524e-05 13.3369565102512 11.1434574019981 -1.56905678690055 0.0645742356116711 48 26 AT5G51570_at 8.31972082165833 8.33126605139633 8.87043894217112 8.88163656722587 9.13464218537122 8.87089877984937 4.39739258762318 4.47481837414308 3.74535951423889 3.92720875655377 6.60632219216201 6.34710136147425 6.02141758092585 6.83365889798142 6.08774029185188 5.49078868050739 6.91796096867216 5.72990198672026 3.52605087480862 0.279352538859832 0.282718234906771 0.276673493668713 0.284721707357399 0.277725518843523 0.285985933125959 0.277236873143798 0.276638674067916 0.285413030669408 0.289197663591571 0.276443863003735 0.285079195075012 0.280332481311839 0.280065542864199 0.276443863003735 0.277210314558082 0.285643048399074 0.276443863003735 0.290533641611411 5 5|0 +|/ 20967279 20968433 20968007.3 20966630 20968723 + gene protein_coding_gene TRUE TRUE AT5G51570.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to Os06g0136000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056723.1); similar to hypersensitive-induced reaction protein 4 [Hordeum vulgare subsp. vulgare] (GB:AAN17454.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 1.49509446092357 17.6772379817027 3.39182154061202e-09 1.61586378194757e-05 13.3354047278275 12.6537190604651 1.49509446092357 0.0476494681889597 49 27 AT5G57220_at 4.38005740370082 5.16984743993366 8.5043623921378 8.61057275536894 9.05939123202631 8.54797272979125 1.99891150972582 1.65529561979154 3.78271914437781 2.69631792557470 3.59057115555419 7.72698061372539 2.50138110418810 4.77316137581336 4.73985817259147 2.50584527427419 3.61020980177412 3.39707593859581 2.52192771198513 0.275243831072700 0.273189748277187 0.285506980375604 0.281677245401644 0.279787249881148 0.278314478394705 0.280847297292816 0.276236468793538 0.269514023679598 0.28187552966426 0.269514023679598 0.280256299319303 0.280135275170299 0.271513902198221 0.283834165182410 0.274245288547784 0.286849656566895 0.277867251124897 0.275572342681567 5 5 + 23206310 23206876 23206609 23205066 23207083 + gene protein_coding_gene TRUE TRUE AT5G57220.1 CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2); oxygen binding member of CYP81F similar to CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37430.1); similar to CYP81F3 (cytochrome P450, family 81, subfamily F, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37400.1); similar to CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37410.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 2.34870001006223 17.6128459872293 3.52123290875092e-09 1.67716323443807e-05 13.3230199466489 9.54377989708141 2.34870001006223 0.174319373061222 50 28 AT5G45840_at 2.80930127196256 3.22426051844515 3.01400654087623 3.04371144030176 2.49223787477022 2.38275551184782 6.07231945141543 5.65153286749472 4.29499632173119 4.32009376133848 3.42182281375553 2.84194316421689 3.41326516056436 4.16319012319441 2.76808508549804 3.53163752917846 4.55171853622893 2.79474081130149 3.40183735668447 0.249041207366307 0.246260925597074 0.248274484043362 0.240982437726668 0.240982437726668 0.246805791759714 0.246173593997731 0.25625907062263 0.260717937540711 0.246296674643188 0.245633758368186 0.246229707478889 0.244350940915908 0.241133768952950 0.247662399096514 0.243103839305344 0.257120390879057 0.247141235478082 0.240982437726668 5 5 - 18611309 18612086 18611757.091 18611307 18614448 - gene protein_coding_gene TRUE TRUE AT5G45840.1 leucine-rich repeat transmembrane protein kinase, putative similar to MRH1 (morphogenesis of root hair 1), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G18640.1); similar to transmembrane kinase [Oryza sativa (japonica cultivar-group)] (GB:AAQ01158.1); similar to Os01g0206800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042346.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.78531896154095 -17.5108927244730 3.73729099850557e-09 1.77969797348835e-05 13.3031983543786 7.30698712609439 -1.78531896154095 0.104138265515721 51 29 AT5G02540_at 3.99054990541454 4.10529789218698 2.16540819686940 2.06757015715114 2.97283122797674 2.60832233290088 1.80729288552186 2.17725541626586 9.77706586470333 5.51663995872347 8.95434301597845 8.89190927141359 5.13886927878576 4.63734191131853 10.3345384199724 5.57207445785845 2.64810509023586 5.99604965823432 7.39391135275471 0.275613394819399 0.268633899156296 0.272043914907454 0.272517642244762 0.265266923522676 0.282635748829346 0.277762696222271 0.279281196756958 0.277644426284098 0.280571587274704 0.270809633479375 0.266124327562356 0.26476117355054 0.268414472684544 0.268230007834855 0.266404860546767 0.281846041212879 0.276394439166019 0.270740552904214 5 0|5 /|+ 569764 570688 570231 568522 570918 + gene protein_coding_gene TRUE TRUE AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT2G37540.1); similar to putative pod-specific dehydrogenase SAC25 [Brassica napus] (GB:CAB58175.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -1.71570468360702 -17.5050866160484 3.75002345075755e-09 1.78538616490567e-05 13.3020616277785 9.77891247513684 -1.71570468360702 0.0935901623425344 52 30 AT5G22630_at 5.41451950115192 5.4845045456432 8.93264710957 8.8736907367921 7.4617602271647 7.72908656290659 5.40212771268017 5.64571901790254 5.5139705154249 4.74183839233915 7.55281815096734 7.51383430980604 7.59128515734147 8.0773447940588 7.11520378417963 7.60698109374116 8.5407386849831 7.4915940247024 5.52709910357862 0.204260364266095 0.198647095689231 0.204974543358744 0.207749725002614 0.197725317435069 0.196825615232292 0.205888491746653 0.199724095962751 0.205905521479405 0.208421100343045 0.193365481588467 0.201404150239344 0.194728186384785 0.197646658136128 0.201362799987649 0.199837689782527 0.199044925341510 0.202867626836073 0.200793662635989 5 5 + 7525350 7525884 7525596.091 7524345 7526163 + gene protein_coding_gene TRUE TRUE AT5G22630.1 prephenate dehydratase family protein similar to prephenate dehydratase family protein [Arabidopsis thaliana] (TAIR:AT3G44720.1); similar to prephenate dehydratase [Ipomoea trifida] (GB:AAS79603.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) 1.54949600854112 17.4656504293672 3.83776784289881e-09 1.82677749321983e-05 13.2943180233835 13.3416040952698 1.54949600854112 0.0645597938728607 53 31 AT5G10140_at 1.25889339915248 1.52413862995114 2.74741229869700 2.57722232049192 1.80627304132546 2.33853261052234 1.09751737036176 1.47309165361851 1.77603183816598 2.37777772449337 8.82265220079692 9.1184442023034 5.34732672134083 3.72407764089235 6.32619978950423 1.95117534155053 2.48640032476687 5.95836504752246 1.80416966749449 0.269112941948264 0.2665492953505 0.265969952991051 0.272135964624169 0.274121631782743 0.276410157662309 0.268254160682998 0.274125821673558 0.279580917056504 0.263804000386682 0.287573469674167 0.283365333494732 0.283251729951855 0.267516132916076 0.281792895339736 0.275992043035238 0.28134883099562 0.279546252226997 0.263804000386682 5 5|0 -|/ 3173757 3179276 3176250 3173498 3179449 - gene protein_coding_gene TRUE TRUE AT5G10140.1|AT5G10140.2 FLC (FLOWERING LOCUS C); transcription factor|FLC (FLOWERING LOCUS C) MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex. Identical to FLOWERING LOCUS C protein (MADS-box protein FLOWERING LOCUS F) (FLC) [Arabidopsis Thaliana] (GB:Q9S7Q7); similar to MAF1 (MADS AFFECTING FLOWERING 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77080.4); similar to flowering locus C [Thellun (GB:AAY34137.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 1.89149426274347 17.1080892107215 4.74390096912741e-09 2.25762247120774e-05 13.2222586871249 5.5792967831664 1.89149426274347 0.125231800204515 54 32 AT5G13320_at 6.62071009585105 7.1747137218336 10.338313859626 10.4747974598435 7.80290591520339 7.28942175916854 2.83104345330801 3.0486337340592 3.38870005764116 3.67800632480888 5.24718891161337 5.14048890789158 5.90689869534318 5.25353499518171 4.38843188848383 7.0045579382528 5.34507440862733 5.31954096147769 3.51351648590193 0.239067303797603 0.241367932633696 0.237963633482136 0.237963633482136 0.237963633482136 0.252685273806902 0.237963633482136 0.248881142957817 0.243790842506091 0.242316988609531 0.237963633482136 0.237963633482136 0.237963633482136 0.245287621510521 0.238464688253064 0.239081550998482 0.241720982682438 0.237963633482136 0.239029439334757 5 5|0 +|/ 4270208 4270799 4270536.8 4267513 4271054 + gene protein_coding_gene TRUE TRUE AT5G13320.1 PBS3 (AVRPPHB SUSCEPTIBLE 3) signaling gene in disease-resistance involved in restricting the spread of both virulent and avirulent pathogens similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48660.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G51470.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 1.98611114612494 17.0925603293543 4.7882228479523e-09 2.27823643105570e-05 13.2190519636613 11.4362952720998 1.98611114612494 0.138071086238244 55 33 AT5G17650_at 7.68442240836174 7.85036969955783 10.4989207929463 10.4233563874110 9.95981380066942 9.76815220373574 9.09777835474515 8.91829018008503 5.79591356531642 7.32909037067482 8.62266501130531 8.01556466050265 9.5505761978719 9.3082379537367 8.69466910076253 9.68011501076937 10.3175086447784 9.22955312381846 5.87156248143254 0.174543747727051 0.175731412332562 0.176400302958457 0.175230779828688 0.176568918071835 0.180450125348983 0.176546184351903 0.176176581027500 0.241690069034687 0.190135092480175 0.177699240731549 0.182361096883543 0.172373355086099 0.172373355086099 0.172373355086099 0.174897304839482 0.178560281973317 0.177578109466880 0.215494669944684 5 5|0 -|/ 5817104 5817710 5817447.6 5816700 5818349 - gene protein_coding_gene TRUE TRUE AT5G17650.1 glycine/proline-rich protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G45350.2); similar to Unknown (protein for MGC:12025) [Mus musculus] (GB:AAH05782.1) 1.47033951813064 17.0325553105789 4.96378256441479e-09 2.36127136589211e-05 13.2065990754714 17.0299129878146 1.47033951813064 0.0553230224770817 56 34 AT5G17420_at 1.52967563370167 1.32109608553996 4.36636422039562 4.32731224022755 3.40721599445723 3.60749134768492 1.98518868713862 2.00479281465802 2.16060809200871 2.13183396466769 2.74590338454096 3.72932442769665 3.29737950954346 3.50973293705678 4.19099967559652 2.96396677982249 6.64506846489117 4.19983416961625 2.86988872749002 0.226349304332624 0.227282800114772 0.23009094834128 0.228894361525118 0.226504506218835 0.21976391026063 0.225033472042336 0.218009655866459 0.220108145330246 0.223242574228306 0.222696555635247 0.226322646033822 0.218477897932835 0.22334417682936 0.221292683985663 0.22587772254538 0.232960922749971 0.225387311561108 0.218843040414641 5 0|5 /|- 5736879 5737416 5737158.9 5736632 5741467 - gene protein_coding_gene TRUE TRUE AT5G17420.1 IRX3 (IRREGULAR XYLEM 3, MURUS 10); cellulose synthase encodes a xylem-specific cellulose synthase Identical to Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) (CESA7) [Arabidopsis Thaliana] (GB:Q9SWW6;GB:Q9XHP6); similar to CESA2 (CELLULASE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to cellulose synthase 3 [Eucalyptus grandis] (GB:AAY60845.1); similar to Zinc finger, RING-type; Cellulose synthase; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE78816.1); similar to cellulose synthase [Populus tremuloides] (GB:AAM26299.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.44160556853626 16.9153175881350 5.32741180348576e-09 2.53371705373783e-05 13.1819822407783 5.96750200963429 1.44160556853626 0.050609251046097 57 35 AT5G35490_at 8.98816722096307 9.26501648423753 8.14980911892333 8.34447194685779 8.63737502328115 7.64432186800096 10.9244771286917 10.7741917143845 9.7523982697928 10.8413058140904 8.84416968175436 8.80812561382695 8.54321364498947 9.74255999344598 8.60170719419791 10.2718293653327 9.74322763387978 8.32687730653887 10.7814800622600 0.217899176984520 0.217142729508093 0.231576738252176 0.226521576985248 0.215292660425633 0.235643909566319 0.22321682106154 0.219911397346615 0.218929404403662 0.221155638593771 0.217228278292611 0.215292660425633 0.219637562199341 0.215292660425633 0.225709852791177 0.229474420555654 0.22636148104646 0.232547156908313 0.220912171493480 5 5 + 13707468 13707637 13707563.333 13707047 13707778 + gene protein_coding_gene TRUE TRUE AT5G35490.1 unknown protein -2.29391057741562 -16.6364094104410 6.31489851295856e-09 3.00273424291179e-05 13.1218574684419 18.8752830729809 -2.29391057741562 0.183411771835614 60 36 AT5G26570_at 9.95845837380043 10.0323581298725 10.3115654017271 10.3452410931300 11.0035239588910 10.6189236050087 8.52750103972108 8.55978129577128 5.34902521703883 7.40445014538367 9.65086120051 9.58183001752777 9.64914340987083 9.654707341547 10.0170831996566 9.34307391758564 9.75181142758938 9.87102074312328 6.65301531053544 0.113592254337421 0.116043309436999 0.124109617137058 0.119075723483597 0.117054894806481 0.125077699453892 0.122601826013268 0.120399919463501 0.172137934996789 0.138260366381718 0.117975100555407 0.113592254337421 0.11801087993289 0.117021700911096 0.117500057733993 0.113592254337421 0.124548671684754 0.116921546954993 0.133782916859209 5 5 + 9266983 9267504 9267175.909 9261583 9267732 + gene protein_coding_gene TRUE TRUE AT5G26570.1 PWD (PHOSPHOGLUCAN WATER DIKINASE); catalytic chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position. Identical to Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) (GWD3) [Arabidopsis Thaliana] (GB:Q6ZY51;GB:O81504;GB:O81505;GB:Q5XMK9;GB:Q84TI8); similar to SEX1 (STARCH EXCESS 1) [Arabidopsis thaliana] (TAIR:AT1G10760.1); similar to Os12g0297500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066613.1); similar to chloroplast alpha-glucan water dikinase isoform 3, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21981.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) 1.48624804253761 16.5587792022185 6.62410196492412e-09 3.14909807412492e-05 13.1047211423138 17.9990549279881 1.48624804253761 0.0682534863020187 61 37 AT5G53710_at 2.43929511253510 2.79659903003748 5.8156780386138 6.00752522599812 8.10604656910958 7.91586616787573 4.62797617922568 4.93316237214644 3.8165917508116 3.61248642223553 5.67159059464662 3.65453648499011 4.47918300119968 6.17439045975652 4.5866831164117 3.66111977696766 5.52940038535202 5.92405305816299 2.32099081558154 0.251797658070169 0.251965784543517 0.255154085728676 0.252160433504404 0.249378271751852 0.248252088453178 0.249287831792591 0.253114388430654 0.246805184948295 0.246805184948295 0.248658997527701 0.254712597872648 0.246805184948295 0.24840817338539 0.246805184948295 0.247130946636746 0.264603622901055 0.25681845308508 0.255228168146838 5 5 - 21822640 21822935 21822782.455 21822485 21823020 - gene protein_coding_gene TRUE TRUE AT5G53710.1 unknown protein 1.60129056050894 16.3252322634610 7.65835577142014e-09 3.64001649815599e-05 13.0520784462896 9.43533988989047 1.60129056050894 0.0937979633769476 62 38 AT5G25570_at 1.64371210778434 1.62926433120808 2.82154774143932 2.90991669612663 3.24627094322631 3.46085472084098 1.59562632956873 1.42794701871314 1.12439678344887 1.19444589386679 3.11366826788287 2.91111252408595 3.04302420241082 3.03323670450764 2.73227788516955 2.79000013683961 2.63062830456227 2.65997463246287 1.36754093675382 0.215608152366038 0.215443960629013 0.217150898873726 0.217482918601318 0.216520495351969 0.224172910742458 0.218208228164549 0.221901205044079 0.217246928261353 0.222978128565549 0.221185840691864 0.220648278780037 0.215455997853740 0.215443960629013 0.225800959468866 0.22539634336444 0.229761477611597 0.220484749645951 0.218432571949224 5 5|0 +|/ 8901835 8902868 8902266.111 8901744 8903219 + gene protein_coding_gene TRUE TRUE AT5G25570.1|AT5G25570.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83630.1) 1.37963077710786 16.2304898763659 8.12709629121121e-09 3.86199615758357e-05 13.0302464389013 4.38840992124512 1.37963077710786 0.0496097828265787 63 39 AT5G59310_at 3.27246855739377 3.28281730896273 7.27435657177273 7.832951643397 11.1071467952284 11.1500115522863 7.2390106194164 7.15448767030933 1.91276308237684 8.08430296932905 4.00995697560340 2.30668680106403 3.65972460433983 3.93867640657133 6.02884583489397 6.19688066641352 7.91532831422464 8.30620876722767 2.44768260485377 0.396754674969860 0.392887778964479 0.39589049567445 0.392887778964479 0.407352073709049 0.40882975130281 0.392887778964479 0.395234645730447 0.41415881331818 0.396695353482993 0.40001674535796 0.402568931660751 0.395273753755638 0.405638781226554 0.392887778964479 0.392887778964479 0.402569627076321 0.392887778964479 0.412563555564644 5 5 - 23942735 23942958 23942846.182 23942311 23943078 - gene protein_coding_gene TRUE TRUE AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Identical to Nonspecific lipid-transfer protein 4 precursor (LTP 4) (LTP4) [Arabidopsis Thaliana] (GB:Q9LLR6;GB:Q9FIE7); similar to LTP3 (LIPID TRANSFER PROTEIN 3), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59320.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.5956554164681 16.0122592758004 9.33037942938155e-09 4.43286326689917e-05 12.9788795914785 12.0109253890853 1.5956554164681 0.0980652189286256 64 40 AT5G58310_at 2.30192181313488 2.33946915658076 1.65673836324798 1.60248230309682 2.02991735335272 1.29251528217888 6.51209474119594 7.08747567702903 4.24197566283451 5.23992910041819 3.47656674993294 4.36797471601546 2.98568352991092 4.73084751313722 5.91307243935019 6.8086106884241 4.08820157784773 4.00555802256795 3.3489455412121 0.248973614100503 0.242474243460070 0.248309065763653 0.242277514972233 0.242997007152410 0.241507725785067 0.256232558934671 0.258736740833925 0.242820817155914 0.246903231164941 0.241753756743507 0.241182668757560 0.242298190689311 0.241182668757560 0.258457250607312 0.248162539247200 0.254887512304404 0.242550924527625 0.242493284213445 5 5|0 -|/ 23592379 23592994 23592676.6 23592218 23593310 - gene protein_coding_gene TRUE TRUE AT5G58310.1 hydrolase, alpha/beta fold family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT4G16690.1); similar to hypothetical protein [Capsella rubella] (GB:CAC82615.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) -2.00174061387992 -15.7035918281664 1.13767793280908e-08 5.40397018084314e-05 12.9035661267123 7.51483408929542 -2.00174061387992 0.162263878354649 65 41 AT5G61380_at 8.64572276461965 8.37842612065829 9.16142787897321 8.85216664725696 9.53369511491726 9.55874040230773 3.89550411419174 3.78993284388393 4.44367044825854 4.1502421772951 5.41516423773872 6.07941976754599 5.97596587275917 6.38453988008643 5.85795732381111 6.10408453523871 6.4233389488778 6.13554797396482 4.04105569200199 0.246234824554589 0.241602186652022 0.245894113279670 0.243834985123397 0.245474782194289 0.246862879932185 0.240913627257521 0.255580087188827 0.245426162033377 0.265209452011461 0.239900539702332 0.238575878144012 0.238575878144012 0.238575878144012 0.240859474526820 0.23919705621116 0.242348909297312 0.240046447428621 0.253257134762243 5 5 + 24694841 24695357 24695054.909 24692313 24695776 + gene protein_coding_gene TRUE TRUE AT5G61380.1 TOC1 (TIMING OF CAB1 1); transcription regulator pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Two-component response regulator-like APRR1 (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) (APRR1) [Arabidopsis Thaliana] (GB:Q9LKL2;GB:Q9M4B7); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to timing of CAB expression 1 protein [Castanea sativa] (GB:AAU20772.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 1.4210595007835 15.5793935071144 1.23342816783421e-08 5.85755036904467e-05 12.8723504767013 12.8562811975285 1.4210595007835 0.07318853179925 66 42 AT5G20230_at 10.7283623967267 10.8065776264062 12.0766328380819 12.1030727581593 11.4467012668742 11.2815054482789 5.03743928508946 4.22324711747397 8.14039950239077 5.573954802423 8.50142326985686 8.95206131058106 5.34698578597075 8.48164634923527 9.04007157279254 5.63299568818702 6.32903822393651 7.57362005819908 4.46718563286952 0.258035975242844 0.256204477668362 0.257474242527532 0.257713790547683 0.258252369910014 0.258192441834489 0.260753692258913 0.266320381758915 0.263544381214553 0.270003329114724 0.257345303796598 0.253572478899284 0.266125131099556 0.258722500905450 0.253572478899284 0.266055614534911 0.262048570020659 0.258884344308357 0.272796079395428 5 5 + 6826720 6827343 6827061.364 6826508 6827601 + gene protein_coding_gene TRUE TRUE AT5G20230.1 ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding Al-stress-induced gene Identical to Blue copper protein precursor (Blue copper-binding protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) (BCB) [Arabidopsis Thaliana] (GB:Q07488;GB:O82664); similar to UCC3 (UCLACYANIN 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT3G60280.1); similar to Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form (GB:1X9R); similar to Umecyanin (UMC) (GB:P42849); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 1.84661869163972 15.5039652960638 1.29584722796680e-08 6.15268263838635e-05 12.8531297981010 16.4843141395893 1.84661869163972 0.144478905718428 67 43 AT5G01240_at 7.1430381974327 7.16456227208895 5.63668099666322 5.70359013495248 7.11118736256784 6.94381094562896 7.00738228211767 7.05061203817204 8.40180575151898 7.83965474390029 8.64725600057713 8.960866302693 8.612075110508 8.33538100599061 8.412694399731 8.37400169259636 7.49257486394716 8.03244032599191 8.2703326191843 0.181094028154693 0.181349664244511 0.214497240555169 0.227041433798241 0.176531485341241 0.193325029127391 0.181689543966364 0.180381583144622 0.181641436073405 0.174659499515934 0.175660969816336 0.181612198067594 0.183052823190815 0.179954860459180 0.174446260543287 0.179468333002057 0.186971318638232 0.183420695545713 0.180822053903205 5 5|0 +|/ 100643 101431 101040.1 97893 101834 + gene protein_coding_gene TRUE TRUE AT5G01240.1|AT5G01240.2 amino acid permease, putative Identical to Auxin transporter-like protein 1 (AUX1-like protein 1) (LAX1) [Arabidopsis Thaliana] (GB:Q9LFB2;GB:Q9SMW2); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT2G21050.1); similar to AUX1 (AUXIN RESISTANT 1), amino acid permease/ transporter [Arabidopsis thaliana] (TAIR:AT2G38120.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT1G77690.1); similar to Auxin transporter-like protein 4 (AUX1-like protein 4) (MtLAX4) (GB:Q8L884); similar to AUX1-like auxin influx carrier protein [Pisum sativum] (GB:BAC98948.1); similar to Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) (GB:Q9FEL7); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -1.26041498531283 -15.4107759527709 1.37776611975094e-08 6.5402557704577e-05 12.8291044299897 14.9846124875141 -1.26041498531283 0.0322939641516316 68 44 AT5G47220_at 8.36913095180406 8.74640653784102 10.5947908158364 10.7258372454160 9.69550212761319 8.88289975178616 4.40671400025203 4.80794916073169 4.79952778106345 3.45300144244685 6.63604466554067 6.60958823218586 6.61001137027965 7.84139165947499 5.78426139143056 8.34704048079499 6.84142896894716 5.77629698211162 4.05504597053266 0.242218681986054 0.242218681986054 0.242218681986054 0.242218681986054 0.244264466715452 0.2557442270705 0.248421498109959 0.244263851450137 0.253285768266409 0.247401046294071 0.250113593801295 0.244195367761328 0.242218681986054 0.242218681986054 0.243692147744547 0.242218681986054 0.248359761111492 0.242328146047442 0.254861858171892 5 5 - 19189306 19189790 19189612.636 19189089 19190050 - gene protein_coding_gene TRUE TRUE AT5G47220.1 ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2); DNA binding / transcription factor/ transcriptional activator Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. Identical to Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) (ERF2) [Arabidopsis Thaliana] (GB:O80338;GB:Q8LBU9); similar to ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G17500.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD65036.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 2.00913684650349 15.231478169543 1.55172937882973e-08 7.3645076319259e-05 12.7819951725371 13.7327953406734 2.00913684650349 0.171387236387661 69 45 AT5G56870_at 9.41954446546259 9.62695606764894 10.39169661833 10.1242320692697 11.2155550265478 11.0934615312203 6.56979439169407 6.43435811437699 7.83147532725276 6.67902276519253 8.13541486298182 8.78667013772668 8.78040421671882 9.00359283257916 8.06160487330471 9.28548806586169 9.75750342776879 8.5522297867954 6.88981535773429 0.200166347945583 0.203486609483932 0.204308921088049 0.205305005142728 0.209592685239974 0.204595415748283 0.210493352354638 0.208331771877327 0.220518108018382 0.232565636491056 0.218884216202466 0.200166347945583 0.200166347945583 0.210350636060396 0.206682837770191 0.200166347945583 0.202577928776437 0.205374205432408 0.227660005824925 5 5|0 +|/ 23024811 23025595 23025284.556 23021422 23025875 + gene protein_coding_gene TRUE TRUE AT5G56870.1 beta-galactosidase, putative / lactase, putative similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT3G52840.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to pear beta-galactosidase1 [Pyrus communis] (GB:BAE72073.1); similar to beta-galactosidase [Pyrus communis] (GB:CAH18936.1); similar to beta-galactosidase precursor [Carica papaya] (GB:AAC77377.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 1.35760078120646 15.2085035423612 1.57569957584957e-08 7.47669448740621e-05 12.7758732368058 17.3238504566656 1.35760078120646 0.0665319597819912 70 46 AT5G22570_at 4.4153345601545 4.22301159600217 9.06258521472237 9.12825337546882 5.01761728471625 4.52901547629596 1.25089884446032 1.55671588624888 2.06310417235958 1.79662108061238 1.31680812491937 1.79942431341511 1.34205880703633 2.00793685376492 1.44893750500783 1.95132399793265 1.90026853345322 2.45149185572534 1.17731515451768 0.243447264072743 0.232188600014722 0.233898878739026 0.224393536784481 0.222872370686352 0.242390295058213 0.220967170053375 0.222480385074242 0.218569147485786 0.216494949419311 0.221399037742827 0.219941987531294 0.217628181249181 0.216494949419311 0.219000099663225 0.216738893814953 0.220538982854782 0.218990393093059 0.230965957876304 5 5 - 7495631 7496247 7495892.636 7495542 7496787 - gene protein_coding_gene TRUE TRUE AT5G22570.1 WRKY38 (WRKY DNA-binding protein 38); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 38 (WRKY DNA-binding protein 38) (WRKY38) [Arabidopsis Thaliana] (GB:Q8GWF1;GB:Q9FK82); similar to WRKY62 (WRKY DNA-binding protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT5G01900.1); similar to DNA-binding protein 4 [Nicotiana tabacum] (GB:AAF61864.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.55278363351103 15.1361586503698 1.65385571056040e-08 7.84589149089855e-05 12.7564669673552 6.62607638879369 1.55278363351103 0.105769705257934 71 47 AT5G39030_at 7.28172105822626 7.56214292410156 7.79184219965597 7.584997097195 7.31812667132224 7.17015431821237 7.04375142629095 6.79445058058665 6.72559183055569 6.56522058721528 5.1609489482339 5.26689694291679 6.19741774266431 5.85865651659514 4.90980490716336 6.13059978697142 6.3821404384251 5.4649683804782 6.73512842171009 0.223281803277137 0.209017960366301 0.223315847423014 0.218794733695761 0.215637939940856 0.223061883970817 0.215039719465313 0.212101667010599 0.21466848685205 0.21083575237395 0.220742615934672 0.220963390644712 0.211136389248487 0.213160723770515 0.213181125803175 0.215524621260460 0.227512599604645 0.213918494718261 0.214698872584101 5 5 + 15639186 15639683 15639512.636 15637296 15639716 + gene protein_coding_gene TRUE TRUE AT5G39030.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39020.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39000.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38990.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.39668554638795 -15.0423034309219 1.76161489310004e-08 8.35533943797348e-05 12.7309959278636 13.4917696949946 -1.39668554638795 0.078443227789016 72 48 AT5G65640_at 3.19745861721341 3.28045899004436 3.80463341798595 4.37716125047504 5.74311087201052 5.40971064057552 4.30629180926674 4.40190636546012 2.85288764025046 3.35879969445065 6.35665587546851 7.34183832310745 6.75609279842725 6.51201858657002 7.6967732849328 7.46120244365963 7.02527854741182 7.58513113043024 3.22326987153951 0.30965320969564 0.294015113368413 0.292618021920075 0.289417177051080 0.288617913032738 0.304240075321654 0.288617913032738 0.295234050301217 0.306234470662496 0.29301198061347 0.291673041861889 0.294053362061503 0.29420265756977 0.291606160639186 0.30139107754284 0.291427659312723 0.3027310050365 0.297193968915712 0.288617913032738 5 5|0 +|/ 26254881 26255910 26255494.7 26254285 26256310 + gene protein_coding_gene TRUE TRUE AT5G65640.1|AT5G65640.2 BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor|BHLH093 (BETA HLH PROTEIN 93) similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to Os03g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048889.1); similar to Putative bHLH transcription protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05491.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.60739054657393 15.0242955513458 1.78315333539176e-08 8.45571311642771e-05 12.7260703736893 9.4335212999612 1.60739054657393 0.116728550662039 73 49 AT5G44210_at 3.94214879290379 4.61494965672607 5.09343993167199 5.7820523634843 6.45303109490365 6.61183310397831 2.60689658984227 2.63196218465802 4.05296136014618 3.08770904441914 6.97033885178084 6.15895617957165 7.16333074856903 7.0856788723128 6.1636672666504 6.26706628584445 6.58180396798146 6.80723330858482 3.17494307139309 0.263144784097052 0.255077008429189 0.257336559569127 0.252762217031470 0.251023929519311 0.264963746851314 0.270643357708188 0.265468123511613 0.255066444220669 0.266659801088609 0.253820112705456 0.252380893704409 0.25017342571413 0.259891258359453 0.251195865822447 0.255519942080342 0.263068157402521 0.259353513849703 0.256475834058922 5 5 + 17824084 17824530 17824305 17823699 17824761 + gene protein_coding_gene TRUE TRUE AT5G44210.1 ATERF-9/ATERF9/ERF9 (ERF domain protein 9); DNA binding / transcription factor/ transcriptional repressor encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Identical to Ethylene-responsive transcription factor 9 (Ethylene-responsive element-binding factor 9) (EREBP-9) (AtERF9) (ERF9) [Arabidopsis Thaliana] (GB:Q9FE67); similar to ATERF10/ERF10 (ERF domain protein 10), DNA binding / transcription factor/ transcriptional repressor [Arabidopsis thaliana] (TAIR:AT1G03800.1); similar to ethylene-responsive element binding protein ERF4 [Gossypium hirsutum] (GB:AAX07461.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.96299245942906 15.0197358962082 1.78865238903689e-08 8.4800009764239e-05 12.7248212293269 9.76118784501175 1.96299245942906 0.168911852365963 74 50 AT5G27920_at 5.09102274045751 5.4551769100578 4.76005134194309 4.39146085713458 4.12891812023739 4.00858845207004 3.51329405959499 3.58151439375413 6.43529174731565 4.49990848544538 3.6951631659765 4.24451602702299 3.87053658797085 3.9032285237922 4.17802621761362 3.78007813739372 3.90018801938471 4.32022435815305 4.520846437324 0.222495655374301 0.219419893769297 0.208204463694505 0.209138580371345 0.206623626194278 0.214483077850379 0.211275114400374 0.217109279270536 0.234770154896309 0.209352461039135 0.209956555010131 0.210469719407042 0.206866233064969 0.209641286380239 0.214741562374029 0.213424458759069 0.210572314450343 0.210550552647896 0.210760444539649 5 0|5 /|- 9942072 9942648 9942312.6 9941909 9944782 - gene protein_coding_gene TRUE TRUE AT5G27920.1 F-box family protein similar to F-box family protein (FBL3) [Arabidopsis thaliana] (TAIR:AT5G01720.1); similar to Leucine-rich repeat; Leucine-rich repeat, cysteine-containing subtype [Medicago truncatula] (GB:ABE85688.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -1.46730568486358 -15.0139266836643 1.79568524422717e-08 8.5115480576368e-05 12.7232286018323 8.93550870258542 -1.46730568486358 0.0928064342752872 75 51 AT5G08610_at 4.99994090926401 5.15486446809446 4.84593079018825 5.11455420866635 4.48001318937538 4.65907802359099 4.99587458527656 4.77635203500589 4.57959676731587 4.77239344447034 3.45333628382292 4.24367972401607 3.7659652347112 3.76538270369615 5.21147564346173 4.92075779667175 4.85244585318829 3.92958426988902 5.667366876323 0.251703547035268 0.252210019346764 0.248139327524940 0.250758264798586 0.256983880352667 0.246537754182573 0.253638533220855 0.251550303787341 0.251116509365411 0.249972806587584 0.255561150758653 0.253342563055305 0.246537754182573 0.249862872487566 0.259535680678733 0.246537754182573 0.250791750259808 0.260216126793756 0.247302776245258 5 5 + 2793171 2793991 2793613.182 2790296 2794216 + gene protein_coding_gene TRUE TRUE AT5G08610.1 DEAD box RNA helicase (RH26) Identical to DEAD-box ATP-dependent RNA helicase 26 (EC 3.6.1.-) (RH26) [Arabidopsis Thaliana] (GB:Q9FNM7;GB:Q9ZRZ9); similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G63630.1); similar to DEAD box RNA helicase (RH25) [Arabidopsis thaliana] (TAIR:AT5G08620.1); similar to myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61516.1); similar to DEAD-box ATP-dependent RNA helicase 31 (GB:Q9FFQ1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD46119.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -1.36415421944901 -14.9805036776538 1.83673878827499e-08 8.70430511763519e-05 12.7140401962880 9.51546642687534 -1.36415421944901 0.0726858872725922 76 52 AT5G17450_at 5.834757463342 5.39910185346895 8.90138196703642 8.85787082432143 8.72833741233258 8.14031251665047 6.03347750459152 5.48727871252031 4.47935985192506 5.38994027586083 8.5268714378027 7.75779954513825 7.52061226589141 7.74386702719871 7.05723994506703 7.88270539155247 8.30693628781725 8.47525827553797 5.29882454176393 0.233191275022244 0.226090104246531 0.209892020389060 0.214126154268245 0.217585724245486 0.208688432026193 0.219060623296749 0.218753214016869 0.239362149248934 0.224756873441801 0.211413390739106 0.211837310530235 0.210054723711318 0.216615255566201 0.211499472960328 0.208688432026193 0.214156155896384 0.208688432026193 0.215428778729608 5 5|0 +|/ 5755400 5756702 5756473.778 5755324 5756890 + gene protein_coding_gene TRUE TRUE AT5G17450.1|AT5G17450.2 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84676.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to farnesylated protein 3 [Hordeum vulgare subsp. vulgare] (GB:CAD70173.1); similar to Os01g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043154.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.87056084720229 14.9014390660051 1.93798711056225e-08 9.18218292984394e-05 12.6921315373233 13.6552911960416 1.87056084720229 0.158209771628662 77 53 AT5G36910_at 3.44175602536199 3.87322811167426 6.12455576132149 6.49031844182265 5.29044825193707 5.80958553471287 6.78677738025668 6.80158851194498 4.76927871610611 6.40021540010964 10.9651250580186 10.8845535736828 11.1766010076890 11.1125545432611 10.2502998737494 10.9237901349442 10.4374910654165 11.054603912252 7.15998931049779 0.295294688552079 0.291284114377128 0.273958642599469 0.271116289549594 0.268253066452824 0.284321953855134 0.273461360243891 0.269942210909348 0.269331546459104 0.274116267118777 0.270900536477243 0.271682956070595 0.26889497116582 0.272674130678009 0.268253066452824 0.270640729950675 0.271064141738393 0.271115476290573 0.268732121242192 5 5|0 -|/ 14579288 14579841 14579581.8 14579047 14579980 - gene protein_coding_gene TRUE TRUE AT5G36910.1 THI2.2 (THIONIN 2.2); toxin receptor binding Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Identical to Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic protein] (THI2.2) [Arabidopsis Thaliana] (GB:Q42597;GB:Q8LEF0;GB:Q9FIW2); similar to thionin, putative [Arabidopsis thaliana] (TAIR:AT1G66100.1); similar to thionin (GB:AAC41679.1); contains InterPro domain Thionin; (InterPro:IPR001010) 1.69087191504703 14.8464874937586 2.01193593680166e-08 9.53054053262944e-05 12.6767600936759 14.0575098548946 1.69087191504703 0.132889011868944 78 54 AT5G48490_at 9.74290971608475 10.0807260762736 3.88375378792043 4.17242455417002 9.45154697526843 9.35855037886377 8.48940246177052 8.95715146790293 10.8966861364678 9.55351809307022 12.2935420441561 13.0187857566501 11.1114687365832 11.7155214038842 12.1866005716923 10.9301464394798 7.3417695667278 10.4889334573429 10.0655577990335 0.144010862634514 0.14272713350109 0.215540004273316 0.180651513364776 0.141602901467269 0.140409689602734 0.143332065215891 0.152158267426024 0.147546203774125 0.149088713931797 0.146370546948932 0.143256800823238 0.140409689602734 0.145313959846192 0.143430299147594 0.140409689602734 0.179907828691372 0.140409689602734 0.144754856145070 5 5 - 19665170 19665373 19665273.273 19665061 19665507 - gene protein_coding_gene TRUE TRUE AT5G48490.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1), lipid binding [Arabidopsis thaliana] (TAIR:AT5G48485.1); similar to Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor [Medicago truncatula] (GB:ABE79318.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -1.55248550425568 -14.731962132159 2.1761386102855e-08 0.000103061924583121 12.6443380379077 18.6709415139093 -1.55248550425568 0.112802998769560 79 55 AT5G27420_at 7.35914515630858 7.54874031840167 9.4899923440599 9.5614803939793 8.19704432076656 8.40771216140252 2.36758184393533 2.49190943110547 3.84051350500446 2.75330217673605 2.77019695754335 4.44625641404465 3.02689176096423 3.51327349762894 3.44097354062889 3.02044573626021 3.72380784138509 3.93540452771984 2.52345669922490 0.306628231945181 0.313066902261858 0.301226645559065 0.301435023797153 0.306387098489277 0.305509347743301 0.298325444392341 0.297476528294918 0.297507854438442 0.290731960283122 0.285367968534180 0.293793799476645 0.291647258565252 0.302770021894051 0.288874555262871 0.285179844829985 0.286916254316823 0.292814960178719 0.29437704461776 5 5 + 9684633 9685196 9684848.455 9684075 9685564 + gene protein_coding_gene TRUE TRUE AT5G27420.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5H precursor (ATL5H) [Arabidopsis Thaliana] (GB:Q8LGA5); similar to ATL6 (Arabidopsis T?xicos en Levadura 6), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G05200.1); similar to RING/C3HC4/PHD zinc finger-like protein [Cucumis melo] (GB:AAO45753.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.26913086033332 14.7163136683702 2.19968721886237e-08 0.000104155189813133 12.6398670025722 10.1898242853334 1.26913086033332 0.0549690793758303 80 56 AT5G65390_at 1.96892214809562 2.4686615914912 1.08972581238838 1.03976883761910 3.22601900268681 3.42971532893272 0.729210437902435 0.752201557170305 2.12779627066404 1.59909167944164 7.89324879640153 4.42494831929353 4.1480647121097 4.36587612938782 7.42800731275115 2.08606222862986 1.48619148062227 4.31914439117183 1.68292669521145 0.351850046316732 0.358291369904385 0.355332970316534 0.362156020803184 0.364651474753865 0.36139779049572 0.358024627270393 0.364422360716246 0.353916690384714 0.359081373730551 0.390940667827579 0.363366650398758 0.361900232969057 0.383613360687657 0.392098320040201 0.353606323078136 0.361193903658501 0.355059487933037 0.351850046316732 5 5 - 26146109 26146472 26146175.273 26145810 26146564 - gene protein_coding_gene TRUE TRUE AT5G65390.1 AGP7 (Arabinogalactan protein 7) Identical to Classical arabinogalactan protein 7 precursor (AGP7) [Arabidopsis Thaliana] (GB:Q8LG54;GB:Q9FKQ0); similar to AGP4 (ARABINOGALACTAN-PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT5G10430.1); similar to 4D11_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67543.1); contains InterPro domain Glutelin; (InterPro:IPR000480) 1.43740669590436 14.6503143342209 2.30210872763584e-08 0.000108981827166281 12.6209002605769 4.99913532440333 1.43740669590436 0.0938741393145184 81 57 AT5G51720_at 8.7596131320189 8.47160067678543 8.62503796763517 8.44617372188194 6.46084389473713 6.9110176258745 10.1937910203943 10.1534995906229 8.15873589593262 8.94743953311399 9.31273136732892 8.80740888880496 8.89988928491524 8.89174757531267 8.9978567071713 8.50918235501442 8.87793395902873 10.2324057610664 8.45668027601447 0.132314251595830 0.126253178630881 0.135100051606868 0.128713649283079 0.154814561335894 0.141674370818784 0.135613058784709 0.13466419383185 0.141332551539796 0.134366228783191 0.133785261851728 0.128111500652130 0.125900952683713 0.127244344416224 0.128483536858867 0.128414897737029 0.135578973775292 0.127790808868190 0.131167958233497 5 5|0 +|/ 21026871 21027412 21027056 21026818 21027571 + gene protein_coding_gene TRUE TRUE AT5G51720.1 similar to zinc finger, CDGSH-type domain 2 [Homo sapiens] (GB:NP_001008389.1); similar to Os07g0467200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059590.1); similar to hypothetical protein [Homo sapiens] (GB:CAD97935.1); contains InterPro domain Zinc finger, CDGSH-type; (InterPro:IPR006622) -1.44134599247717 -14.4794165708897 2.59229991011381e-08 0.000122693554745687 12.570952557519 17.2962453982525 -1.44134599247717 0.0977756370023 82 58 AT5G60910_at 5.72907071132522 6.14432274899845 6.90136741377368 6.63497887657002 5.99250712886754 5.83340901241845 6.68326768738045 6.81582144708811 6.04621118137526 3.40136760553297 2.93568696328534 2.81996508878401 2.77259276910807 3.61587399674500 2.81834683135792 6.18708144652701 3.73212140358407 3.16057650784263 3.84987135251771 0.327660001083086 0.331180444945288 0.331203985464849 0.327889752702991 0.326759658014253 0.329373931508004 0.326759658014253 0.328985221283980 0.333646351878508 0.326759658014253 0.327973950757255 0.333427040012751 0.334166008013282 0.326759658014253 0.335905153377764 0.327953124964722 0.331030912369449 0.338272362644492 0.334421375556487 5 5|0 -|/ 24519963 24523058 24520870 24519708 24523369 - gene protein_coding_gene TRUE TRUE AT5G60910.1|AT5G60910.2 AGL8 (AGAMOUS-LIKE 8); transcription factor|AGL8 (AGAMOUS-LIKE 8) MADS box gene negatively regulated by APETALA1 Identical to Agamous-like MADS-box protein AGL8 (Floral homeotic protein AGL8) (Transcription factor FRUITFULL) (AGL8) [Arabidopsis Thaliana] (GB:Q38876); similar to AP1 (APETALA1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69120.1); similar to MADS-box protein FUL-d [Brassica oleracea var. botrytis] (GB:CAD47852.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487)|Identical to Agamous-like MADS-box protein AGL8 (Floral homeotic protein AGL8) (Transcription factor FRUITFULL) (AGL8) [Arabidopsis Thaliana] (GB:Q38876); similar to AP1 (APETALA1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69120.1); similar to MADS-box protein FUL-d [Brassica oleracea var. botrytis] (GB:CAD47852.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -1.41196753647026 -14.459011329746 2.62953231484077e-08 0.000124429469138265 12.5649070272707 10.3107251311592 -1.41196753647026 0.0925931105175184 83 59 AT5G15350_at 7.12571565740982 7.45848535536349 5.83600327209701 5.73483281953861 7.64075278735532 7.72848868132364 9.26693799411886 9.06237759557473 10.0733195520635 9.1698835810137 10.9449597478275 10.4625434314095 10.0947419246441 10.3275736745262 10.5247406715828 9.40365622094505 8.78635432523182 10.1256290748918 9.42861005473404 0.150127589649918 0.142773499528878 0.180655032825247 0.181401451394415 0.144750171387885 0.148694607273865 0.132902171410471 0.132710095188729 0.133776852756239 0.132710095188729 0.132984326512091 0.133380412584265 0.135497351205011 0.135471738194291 0.136692540862513 0.134186942982404 0.137920010984882 0.134738177664380 0.137415539537809 5 5|0 -|/ 4985226 4986125 4985682 4984962 4986242 - gene protein_coding_gene TRUE TRUE AT5G15350.1 plastocyanin-like domain-containing protein Identical to Lamin-like protein precursor [Arabidopsis Thaliana] (GB:Q39131;GB:Q8H7E7); similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G12880.1); similar to lamin [Brassica oleracea] (GB:CAA65749.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) -1.30503800861832 -14.3893953027537 2.76101036031032e-08 0.000130623400146281 12.5441483998417 17.3022222435907 -1.30503800861832 0.0714599843413793 84 60 AT5G13080_at 2.96379332607719 2.78189635609563 7.21356242439701 7.5019183118587 2.97375202047366 2.84858942160416 0.798617852446432 1.08060609559131 1.05379267056382 1.45203143365327 1.30616245496449 1.09141702749787 0.939901576946944 0.875470563759713 1.28364120924679 1.11644610526134 1.11045063453311 1.11543996838136 1.08317221967431 0.310024012371822 0.300049588360244 0.336283999384482 0.325159998361334 0.297242699641749 0.311042664749767 0.285193080204266 0.285193080204266 0.291476450400318 0.293983150571115 0.299779391654703 0.285193080204266 0.291099222448416 0.285193080204266 0.288300985865793 0.293068403416682 0.294041191565816 0.290568302091523 0.292223668372978 5 5|0 -|/ 4149932 4150983 4150438 4149747 4151153 - gene protein_coding_gene TRUE TRUE AT5G13080.1 WRKY75 (WRKY DNA-binding protein 75); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 75 (WRKY DNA-binding protein 75) (WRKY75) [Arabidopsis Thaliana] (GB:Q9FYA2); similar to WRKY45 (WRKY DNA-binding protein 45), transcription factor [Arabidopsis thaliana] (TAIR:AT3G01970.1); similar to WRKY-type DNA binding protein [Solanum tuberosum] (GB:BAC23031.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.33038862226793 14.2726275601449 2.99791946704477e-08 0.000141801590791218 12.5088613964589 4.67094112633689 1.33038862226793 0.0795710295232372 85 61 AT5G47330_at 4.91861219781069 5.54351261576992 8.62945352669034 8.71809648503494 10.3755595868005 10.0067801555004 8.32688102372046 8.25400671214984 8.12450280069442 7.63390877207531 10.4863232007702 8.82320778655228 8.93975431359627 10.1996298387678 9.36488980083679 8.78817452742099 8.91602131369561 9.89965447307969 5.6871678913317 0.195392528375190 0.191734635875177 0.169928714820161 0.160719231919117 0.154926442086707 0.163765694856744 0.164010923706458 0.155173368210786 0.174782698748063 0.171676636156064 0.156971138021725 0.159207626463435 0.155011574155938 0.161500041569582 0.159999258701954 0.157316616610738 0.161154339508909 0.155702039128079 0.185357994998056 5 0|5 /|+ 19225206 19225911 19225647.125 19224326 19226049 + gene protein_coding_gene TRUE TRUE AT5G47330.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47340.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) 1.58898847020579 14.2667383586244 3.0104412590243e-08 0.000142363767139259 12.5070659723084 16.3844794853715 1.58898847020579 0.127129475581508 86 62 AT5G16380_at 4.39470560427343 4.71119620632967 5.23211423218369 5.15353155062548 5.51540324721397 5.66126422714704 2.04363847587404 2.21717115644565 1.97790957107084 1.84075147238919 3.30820467132554 3.13192359294293 3.41107223341122 3.51095157943009 3.78618695226498 3.2108895900954 4.38956688920337 3.98400465093569 1.76317283409415 0.294900890534557 0.279291109917913 0.274240352886142 0.284358529531992 0.282670816119292 0.27984755030451 0.298040689299861 0.285439448112588 0.286876071523952 0.281191535640463 0.278514399978539 0.277069539703919 0.277117638037753 0.275019534312705 0.274240352886142 0.274240352886142 0.280602759929427 0.274240352886142 0.287732557098551 5 5 - 5360128 5360480 5360293.364 5359366 5360713 - gene protein_coding_gene TRUE TRUE AT5G16380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07470.1); similar to hypothetical protein [Nicotiana tabacum] (GB:CAI84656.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.27802238339169 14.217148203906 3.11817115167900e-08 0.000147427132051383 12.491887097089 7.09223374374623 1.27802238339169 0.068729189858571 87 63 AT5G03760_at 3.67123792001151 4.421074831974 2.85360283819649 2.79457142348735 3.03868545538797 2.88691112415158 8.18555722853938 8.55899421304475 6.38160771793298 7.5655248050301 9.7835006941069 10.3946073454907 9.22086795431948 9.08076595528395 9.66701813873987 9.14432034526819 7.6950320438235 9.2506880030626 7.92863258993774 0.294784257523066 0.301833316074464 0.30848553801728 0.298669656367809 0.300466208316613 0.300272000501344 0.294085930474119 0.292063203600909 0.32684178511242 0.295567182786223 0.288391232402187 0.284657860218143 0.283706423880462 0.30953196073761 0.285008164974166 0.286136402978946 0.302272058874482 0.29593455831818 0.290503708628734 5 5 - 985937 986559 986288.818 985674 990548 - gene protein_coding_gene TRUE TRUE AT5G03760.1 ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4); transferase, transferring glycosyl groups encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. similar to ATCSLA02 (Cellulose synthase-like A2), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G22740.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to ATCSLA07 (CELLULOSE SYNTHASE LIKE), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G35650.1); similar to glycosyltransferase 1 [Ipomoea trifida] (GB:AAQ62570.1); similar to Glycosyl transferase, family 2 [Medicago truncatula] (GB:ABE81491.1); similar to cellulose synthase-like protein OsCslA9 [Oryza sativa] (GB:AAL25128.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) -1.71015221565976 -14.1826392682309 3.19561551601435e-08 0.000151056745441999 12.4812602619449 12.8370902615052 -1.71015221565976 0.147678682485152 88 64 AT5G51560_at 3.81063499218789 3.98004767415376 2.9956447936827 3.32765568421025 3.01679047902298 3.14029479354326 4.30126943268875 4.36348626284988 4.69410869065259 4.84582597722306 5.84359939682547 6.83345193654137 4.52756268877311 4.60477000850577 5.99073221828671 4.16531389097857 4.04979803019377 5.00029574314725 5.57269932123944 0.232815163320707 0.235744850025913 0.245118026469496 0.230903209118504 0.236871865288371 0.230782998280162 0.230782998280162 0.232480818095406 0.240347520470747 0.231324062030696 0.235663778350723 0.230782998280162 0.230782998280162 0.237028179716067 0.233972819736899 0.231383441856307 0.238383866600767 0.235231276894572 0.230782998280162 5 5 + 20965219 20965784 20965517.818 20962913 20966080 + gene protein_coding_gene TRUE TRUE AT5G51560.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G45340.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G22730.1); similar to Os06g0134700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056717.1); similar to putative somatic embryogenesis protein kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD68873.1); similar to Os01g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043393.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.26996399967126 -14.1242829710465 3.33139101900045e-08 0.000157441539557961 12.4631690426752 8.69922059013987 -1.26996399967126 0.0688000875471103 89 65 AT5G39520_at 5.86955274165984 5.35599741186476 8.74047283948585 8.42794403421249 7.81581020269029 7.70321912311163 2.32752620430409 2.14653986535593 2.13675476846589 1.88258250046290 2.39721493704189 1.88612864864356 2.07541652622366 2.03181086858127 2.03597653392587 1.85156348203273 2.48195882703976 2.44989733875385 1.80926649491328 0.323262200512457 0.313585250879591 0.345975064286489 0.341401114869715 0.328713411612138 0.345015651048777 0.299630707812935 0.299630707812935 0.300806309179777 0.308343427438389 0.3058208431143 0.300023829161915 0.299630707812935 0.306345655668447 0.299630707812935 0.309009969729363 0.304518169779617 0.313799244606946 0.314487586988561 5 5|0 -|/ 15841364 15842521 15841652.889 15840963 15842720 - gene protein_coding_gene TRUE TRUE AT5G39520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39530.1); similar to hypothetical protein MtrDRAFT_AC119412g1v1 [Medicago truncatula] (GB:ABE86761.1) 1.47439392133177 14.1214014781123 3.33825626106447e-08 0.000157732608335296 12.4622717892599 8.09543971111612 1.47439392133177 0.110382037516186 90 66 AT5G11970_at 6.58373443228228 6.44924918611908 7.924425267513 7.98916281081492 7.86719204193484 7.7228432840694 4.82573489475536 5.41910457817002 5.50356221892819 4.41046824897427 8.48375781031667 8.02640648562535 7.85008182307277 8.2611263989031 8.04156375713077 8.1880639831451 7.8796453204652 6.93331063190799 5.08437856601799 0.2081861763746 0.202616379676127 0.207461753400402 0.205852760702387 0.201726821911318 0.211890694379409 0.206759068602727 0.211129886838452 0.209614489761123 0.226861362144190 0.206854638404312 0.200858847426008 0.197688507330340 0.199068166128867 0.211849234280076 0.198004211812461 0.201128413394914 0.212019284815830 0.202186437436175 5 5 - 3863297 3863583 3863453.091 3863072 3863756 - gene protein_coding_gene TRUE TRUE AT5G11970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19460.1); similar to hypothetical protein MtrDRAFT_AC152551g19v1 [Medicago truncatula] (GB:ABE86249.1) 1.46291660991669 14.0969771839512 3.39707104750374e-08 0.000160477636284077 12.4546514185601 13.3264129141045 1.46291660991669 0.108790890593999 91 67 AT5G15190_at 1.78457234594105 2.12001676885318 4.39598812176959 4.37967792321348 6.03858738466174 4.9232088855483 2.30194830121700 2.14783980920331 0.908246679090983 1.15533354182322 2.46044324879725 2.85712797962616 4.16126946479902 2.75139255981382 2.27201733185581 2.44022380950001 4.6573763931556 2.86290237959061 1.05367145756673 0.268148434356515 0.2570292693523 0.263414433621645 0.265702996771154 0.269846687057853 0.266756382996182 0.2570292693523 0.2570292693523 0.267986326390702 0.268582145114956 0.260384834877091 0.2570292693523 0.259663626747047 0.266820911805472 0.260156880615705 0.262134886639402 0.282141131990062 0.264068377055598 0.264341440128086 5 5 - 4933155 4933456 4933281.182 4932823 4933580 - gene protein_coding_gene TRUE TRUE AT5G15190.1|AT5G15190.2 unknown protein 2.07204311344119 13.9933888810656 3.65937561585437e-08 0.000172832310336802 12.4220310917366 5.55994396191059 2.07204311344119 0.203337949150798 92 68 AT5G14760_at 3.16287647314314 3.5222002301072 3.51869550521849 3.59144925921166 1.93089692557531 2.1629196541651 5.07902693801519 6.03930382365086 4.19390626587609 4.24376120310102 3.3396721113762 3.33030680166261 2.77702095336987 2.96640360095764 2.91130307328803 4.44085799715907 3.15478552043182 2.6779575074554 3.87552077585076 0.240947253623826 0.234605698808568 0.238617939485967 0.233462222376225 0.237019781247283 0.236124318620098 0.247717782405817 0.259541097970048 0.231957308677425 0.233045385880514 0.232501356274976 0.233783860520186 0.234059876230554 0.235775319732670 0.238887163473169 0.236369581405889 0.245510744307442 0.235609688505282 0.231491327796957 5 5 + 4771446 4771960 4771671.273 4768471 4772156 + gene protein_coding_gene TRUE TRUE AT5G14760.1 AO (L-ASPARTATE OXIDASE); L-aspartate oxidase At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 similar to SDH1-1 (Succinate dehydrogenase 1-1) [Arabidopsis thaliana] (TAIR:AT5G66760.1); similar to Os02g0134400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045812.1); similar to L-aspartate oxidase [Pelodictyon phaeoclathratiforme BU-1] (GB:ZP_00589739.1); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; (InterPro:IPR004112); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027); contains InterPro domain L-aspartate oxidase; (InterPro:IPR005288) -1.91987853158890 -13.9775878424747 3.70129183545769e-08 0.000174775000470312 12.4170121338668 7.2780133647968 -1.91987853158890 0.182355026030479 93 69 AT5G36950_at 4.02349321314657 4.31627752798877 3.84513179843289 4.10880343582492 4.42369780704258 4.16306665750342 6.58922932873901 5.92688130561839 4.21832146583355 5.21340279193657 4.17881445187838 4.09833585850055 3.71359419771996 4.04076584135646 5.10339802200575 4.92264382127353 4.98946266759326 4.4005081817861 5.18103533394035 0.266169876949817 0.26547299171954 0.269906752338554 0.268843142475929 0.272272111465763 0.271457751549880 0.276578719513275 0.286605785624625 0.274795200261539 0.277337798933946 0.277379064912165 0.268294222137427 0.288189822947358 0.268817740122186 0.269076323088990 0.26547299171954 0.272553029447221 0.269667391459577 0.271207122323767 5 0|5 /|+ 14614489 14615414 14614889 14612211 14615579 + gene protein_coding_gene TRUE TRUE AT5G36950.1 DEGP10 (DEGP PROTEASE 10); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 10, mitochondrial precursor (EC 3.4.21.-) (DEGP10) [Arabidopsis Thaliana] (GB:Q9FIV6); similar to DEGP3 (DEGP PROTEASE 3), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT1G65630.1); similar to Os05g0417100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055560.1); similar to Serine protease (ISS) [Ostreococcus tauri] (GB:CAL53952.1); similar to Os02g0742500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048089.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) -1.63486078646920 -13.9226647158350 3.85110962984343e-08 0.000181810885624909 12.3994768790430 9.32550275637094 -1.63486078646920 0.140790247382501 94 70 AT5G65850_at 3.25846135855012 3.6658146381943 5.33164508077471 5.37112611227227 5.84634102755381 6.3429142029149 2.48139102481518 2.54693847215087 2.2924771520748 2.42873879045022 3.88662384459117 4.05177055779584 4.34059461649841 3.97070328649189 3.65070748474314 4.39251562318074 4.49643604877548 3.86419580163177 2.78184814113836 0.254776667908247 0.247425018280416 0.255860027330105 0.264915766700955 0.263579550869294 0.273142554204454 0.256002710567311 0.255692617230862 0.26719235825336 0.259063317694275 0.252086878945506 0.25124864628811 0.252041078334075 0.247425018280416 0.247425018280416 0.248309832171045 0.247425018280416 0.250716128344453 0.267039527044281 5 5 + 26364154 26364649 26364408.818 26363540 26364836 + gene protein_coding_gene TRUE TRUE AT5G65850.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G31470.1); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 1.45959574704644 13.8967063836032 3.92420720579786e-08 0.000185222580113659 12.3911403935141 7.6469363742456 1.45959574704644 0.111935313993078 95 71 AT5G22300_at 9.34957048533333 9.36297418046011 10.5668201306574 10.5744068505230 10.3963967966022 10.2554986298876 8.92806366610811 9.00066127526023 5.71230925704669 6.80549043968026 7.95969817152237 8.08791903551063 9.89897037735933 9.35374401276612 7.860695922595 10.7121338912690 10.3583916056343 9.199592459684 7.3586369424425 0.206997645942175 0.204522413565861 0.210557871901223 0.209629807353784 0.207192390831778 0.20884716362883 0.200174731999229 0.200174731999229 0.232541754720638 0.221526333844589 0.217287827586417 0.213220996697475 0.20148712869178 0.207536094667069 0.242878889145961 0.201277151489099 0.206513836705849 0.212235973595940 0.233563813767588 5 5 + 7380988 7381718 7381362.909 7379202 7381928 + gene protein_coding_gene TRUE TRUE AT5G22300.1 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. Identical to Nitrilase 4 (EC 3.5.5.1) (NIT4) [Arabidopsis Thaliana] (GB:P46011); similar to NIT3 (NITRILASE 3) [Arabidopsis thaliana] (TAIR:AT3G44320.1); similar to NIT2 (NITRILASE 2) [Arabidopsis thaliana] (TAIR:AT3G44300.1); similar to Nitrilase 4 (GB:Q42965); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Nitrilase/cyanide hydratase; (InterPro:IPR000132) 1.12661056735944 13.8864455673611 3.95351704067627e-08 0.000186566469149513 12.3878364624872 17.7064850339869 1.12661056735944 0.0275586080677274 96 72 AT5G25350_at 8.47379523663722 9.00429436638582 8.98949009363501 9.11053526887884 9.92452730073845 9.6689195409445 6.3170856904393 7.04946850609967 7.23767910523725 6.20208432886746 10.4391228388763 10.0713698826629 10.4254573251517 10.2825187731630 10.2572204392350 10.5649856823250 10.7993583304625 10.2254009498301 7.19319236401954 0.164401055107534 0.15919379954508 0.159769466568991 0.160495409299891 0.164282093552328 0.161468292476898 0.187097142148059 0.174128241806184 0.180921511708580 0.195848673593831 0.159588895621901 0.164481543442148 0.15919379954508 0.16799241415085 0.15919379954508 0.171532471382433 0.160271974033951 0.15919379954508 0.195318589596713 5 5 - 8794879 8795397 8795175.727 8794255 8797023 - gene protein_coding_gene TRUE TRUE AT5G25350.1 EBF2 (EIN3-BINDING F BOX PROTEIN 2) Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. similar to EBF1 (EIN3-BINDING F BOX PROTEIN 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G25490.1); similar to EIN3-binding F-box protein 2 [Lycopersicon esculentum] (GB:ABC24972.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE90278.1); similar to EIN3-binding F-box protein 1 [Solanum lycopersicum] (GB:ABB89717.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 1.78023994951189 13.8761900361360 3.98305032516003e-08 0.000187920314341050 12.3845293039614 17.1976801056806 1.78023994951189 0.16397339668894 97 73 AT5G19120_at 9.52682734942429 9.75194031274616 7.93325312131507 8.22222019959142 10.2425971261546 10.1724853645517 8.07444009215858 8.3870300125371 8.6172216578227 8.53384410453304 7.31974043533771 8.44189892612415 7.55320709763399 7.8609279461488 6.95244744641038 7.01835698931721 7.14853280789276 7.67464491052806 8.81388707321469 0.187761425255378 0.186126244050749 0.19801538131366 0.189885778068776 0.18765543101848 0.183690724758310 0.188840444572317 0.195271804905927 0.199716823678483 0.188011466940697 0.189138797284067 0.185023988132217 0.200609776917350 0.191928939616916 0.191234318701365 0.184276071708665 0.194498850558879 0.193866095246591 0.183690724758310 5 5 + 6415165 6415719 6415424.455 6414490 6415909 + gene protein_coding_gene TRUE TRUE AT5G19120.1 pepsin A similar to extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] (TAIR:AT1G03220.1); similar to EDGP precursor [Daucus carota] (GB:BAA03413.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -1.30973720887604 -13.8242789339849 4.13627627581401e-08 0.000195108151930147 12.3677133164155 17.1144511215337 -1.30973720887604 0.0842130894701759 98 74 AT5G05410_at 6.16350518117746 6.71865186864111 7.31891323619107 7.41952269486307 8.51784329550496 8.27121299651266 2.93283488908925 2.98117425062494 2.81346135941823 2.26275908292403 3.32054752852747 3.31737672221561 4.02581713112705 3.75498161249853 3.55966283151767 3.56136154098953 5.0279002715413 4.11729639619684 2.19447425837676 0.250988390320934 0.246012161021285 0.258227668202564 0.244060881600492 0.246930526453483 0.245363409953745 0.243343318969857 0.246642744490924 0.249544022636938 0.247519000308383 0.235383654204249 0.241048992711932 0.238143419213615 0.235383654204249 0.235383654204249 0.235383654204249 0.24564807784018 0.240591899538105 0.241528186109047 5 5 + 1603112 1603611 1603432.909 1602206 1603927 + gene protein_coding_gene TRUE TRUE AT5G05410.1|AT5G05410.2 DREB2A (DRE-BINDING PROTEIN 2A); DNA binding / transcription factor/ transcriptional activator Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. Identical to Dehydration-responsive element-binding protein 2A (DREB2A protein) (DREB2A) [Arabidopsis Thaliana] (GB:O82132); similar to DREB2B (DRE-binding protein 2B), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT3G11020.1); similar to DREB2A-like protein [Arachis hypogaea] (GB:ABC60025.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.4139548027167 13.7245675075199 4.44892886071906e-08 0.000209811485071511 12.3350539025500 9.42004875385878 1.4139548027167 0.106884661105183 99 75 AT5G52760_at 8.39989098101328 8.8836549440373 10.7497470534673 10.8387170542827 9.23752540749335 8.50322439655938 2.0734343242092 2.10701751265151 4.85245999997114 3.03267970949015 4.05164796705657 4.75217818933812 3.82859058530707 4.80140403715593 4.40328288415851 5.74493408157421 4.15612508769087 5.14526699551786 3.13326387815053 0.253227839175258 0.258030704714178 0.254291019467251 0.253670521940683 0.267119650564535 0.273860332123689 0.262163361943922 0.268644965162288 0.267675961107041 0.260981651465001 0.253227839175258 0.253227839175258 0.257209504133773 0.262528607337173 0.261832911583025 0.260811323584497 0.265959885277659 0.269335136633536 0.254055748054049 5 0|5 /|+ 21404344 21404701 21404588.778 21404050 21404925 + gene protein_coding_gene TRUE TRUE AT5G52760.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.68316622159534 13.6741155018006 4.6168611819326e-08 0.000217685004728122 12.3183468080692 11.740766421387 1.68316622159534 0.153059883594758 100 76 AT5G05860_at 6.39193583641671 6.1568021308104 5.24081598491363 5.230969950124 6.57603010794446 6.79562920445755 7.08006009250544 7.31499704211264 7.47707112315674 7.81756318522323 8.2759445787805 8.90253824500726 7.4319722000348 7.9590740201445 8.96362946321374 7.80280027658376 6.82636844814953 8.19899204325663 7.69401080542347 0.183771774539754 0.187524848785511 0.194169239406481 0.187806676203890 0.188189781261101 0.188082344144226 0.186071675023673 0.19383911615119 0.188293714382517 0.195431681010416 0.190873602006159 0.188547918272275 0.186177044960171 0.185363415166011 0.185872664997737 0.182830243915368 0.188281061150881 0.182737461372032 0.191643111232194 5 5 + 1766836 1767294 1766981.273 1765508 1767456 + gene protein_coding_gene TRUE TRUE AT5G05860.1 UGT76C2 (UDP-glucosyl transferase 76C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups Identical to Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-) (UGT76C2) [Arabidopsis Thaliana] (GB:Q9FIA0); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glycosyltransferase 76G1 [Stevia rebaudiana] (GB:AAR06912.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.22247190206846 -13.5889719500045 4.91614419547627e-08 0.000231747037374751 12.2898703477011 14.2024283506593 -1.22247190206846 0.0689626499156896 101 77 AT5G65070_at 1.28205174987756 0.941368030262758 3.04079974998241 2.71723941586722 2.24846469140492 2.34959803520701 1.89980346906531 1.63523241552175 1.91061630379558 2.89615079335678 4.59509441398734 6.09984358323721 4.86933336352827 3.32080551078099 4.70947307132728 3.64613976939396 3.9500539060062 4.66910434265297 2.05879152820764 0.318322510645706 0.318322510645706 0.318322510645706 0.318322510645706 0.318524001770203 0.325008888819698 0.318322510645706 0.319543757177745 0.318322510645706 0.319252500809258 0.333355869245246 0.334660327832372 0.324888810988759 0.327070146790218 0.336538968968511 0.318322510645706 0.332577780703102 0.338107099290248 0.318322510645706 5 5|0 +|/ 26009640 26013108 26012148.833 26009486 26013321 + gene protein_coding_gene TRUE TRUE AT5G65070.1 MAF4 (MADS AFFECTING FLOWERING 4); transcription factor Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. similar to MAF5 (MADS AFFECTING FLOWERING 5), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65080.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 1.33708157755290 13.5741955972876 4.97020436849335e-08 0.000234245731887092 12.2848920663966 5.39981996309909 1.33708157755290 0.094941025356809 102 78 AT5G04340_at 5.78600343415066 6.04382885431586 7.93320040592491 7.95360251490368 7.8262870512387 7.96340267657105 3.68298304577242 4.24385284119072 3.14710041231247 3.08876074060948 4.11769963386092 4.11382911030438 4.684181091242 5.30357401248272 2.95928532657032 5.90925258226042 5.07390275967586 4.09772087603873 2.25694954725276 0.228286364301749 0.226165501963103 0.233803815456821 0.243119377322799 0.232506863976603 0.235588766811902 0.229175015824551 0.23006766809835 0.231797426224982 0.238557326002854 0.228919458564688 0.228468216484441 0.226090034421120 0.236766940516133 0.235955471450508 0.231350402817207 0.256995977609079 0.232203297283417 0.239326831304572 5 5 - 1216358 1216862 1216649.091 1216132 1217107 - gene protein_coding_gene TRUE TRUE AT5G04340.1 C2H2; nucleic acid binding / transcription factor/ zinc ion binding putative c2h2 zinc finger transcription factor mRNA, similar to STZ (SALT TOLERANCE ZINC FINGER), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G27730.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52060.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.4059468393448 13.5120818962832 5.20464112541507e-08 0.000245242689829558 12.2638468936781 10.1108288900648 1.4059468393448 0.109485740102634 103 79 AT5G64560_at 6.78575291982846 7.05435717430192 8.61174412992886 8.25789241062967 8.81478793254057 8.58822585236612 5.8968002589553 5.35247964175354 4.26256873245323 4.45754086627615 7.42598837992958 7.60406545882653 6.79921033601207 7.18292723869463 6.91258754373994 7.21467749370281 7.67883767123786 6.7029752723548 4.47357837534969 0.251715578446788 0.24488087210309 0.244760372529036 0.250539306253846 0.24661571829031 0.248783295188312 0.247909964200106 0.258382111100833 0.252264802409336 0.259907931926974 0.248739417771453 0.244299774946335 0.25050295790831 0.257610710943618 0.254957575007061 0.245353117149243 0.256122307308865 0.252983768453283 0.265430638048799 5 5|0 -|/ 25824479 25825343 25824969 25823995 25826867 - gene protein_coding_gene TRUE TRUE AT5G64560.1|AT5G64560.2 magnesium transporter CorA-like family protein (MRS2-2) similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 1.49854740072556 13.4222432123970 5.56530262117586e-08 0.000262181406483595 12.2330658924877 13.2142823728740 1.49854740072556 0.127753096886849 104 80 AT5G54190_at 5.66675930335509 6.42182032458246 3.5639597128566 3.70759202696079 3.89269653224076 3.88921869996067 4.10143714332102 4.10946720699072 6.91648774162338 4.64461889132372 5.61163447026769 6.08866940642312 4.47750973680712 5.43732930263683 7.0954734248138 5.27463983945663 3.30444979672346 4.77444174622987 4.03130783627019 0.290072946305841 0.301338175948063 0.29343141997164 0.293216087885253 0.272486003309938 0.287080087976894 0.272486003309938 0.279652824341317 0.30454928397675 0.272953346739682 0.27745409034751 0.288863466738708 0.272610188271259 0.275841727361819 0.286018593695894 0.272486003309938 0.288423062438466 0.272486003309938 0.277712372643402 5 5 - 22008493 22009158 22008817.818 22008138 22010038 - gene protein_coding_gene TRUE TRUE AT5G54190.1|AT5G54190.2 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase light-dependent NADPH:protochlorophyllide oxidoreductase A Identical to Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) (PORA) [Arabidopsis Thaliana] (GB:Q42536;GB:Q9FK22); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.2); similar to NADPH:protochlorophyllide oxidoreductase A (GB:AAC49043.1); similar to Protochlorophyllide reductase, chloroplast precursor (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (GB:Q01289); similar to protochlorophyllide reductase (EC 1.3.1.33) precursor - garden pea (GB:S20941); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Light-dependent protochlorophyllide reductase; (InterPro:IPR005979); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347)|Identical to Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) (PORA) [Arabidopsis Thaliana] (GB:Q42536;GB:Q9FK22); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.2); similar to NADPH:protochlorophyllide oxidoreductase A (GB:AAC49043.1); contains InterPro domain Light-dependent protochlorophyllide reductase; (InterPro:IPR005979) -1.52744304778079 -13.4047916676899 5.63847273525471e-08 0.000265572065830497 12.2270391561286 9.64686384636297 -1.52744304778079 0.133018595912975 105 81 AT5G56910_at 6.58146298855183 6.6234759784986 8.49002936274602 8.3933684763424 8.860581550109 8.92526074610803 5.30580589359521 6.03583565739585 4.91149608305329 5.13394904592959 7.29846859325825 7.53072384395398 8.12431946755672 7.79182424801472 7.74082802877869 8.11161210272157 8.22749287364969 7.28402917020439 5.63739475030215 0.198010685642617 0.188085865557805 0.191700977819022 0.190012544745311 0.188085865557805 0.194394878709032 0.194305101976519 0.210721272041970 0.216714827883346 0.201342517482982 0.197320564361625 0.198589522201736 0.19666268175484 0.196883903608064 0.194421800442299 0.188085865557805 0.197160932128414 0.199970001182721 0.201421721837063 5 5 + 23040551 23041210 23040852.182 23040148 23041431 + gene protein_coding_gene TRUE TRUE AT5G56910.1 cysteine protease inhibitor similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56920.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 1.49832373492181 13.4004113785992 5.657002333119e-08 0.000266388239866574 12.2255240254214 13.8976153737245 1.49832373492181 0.128134711382128 106 82 AT5G14210_at 5.21083398882766 5.2858449980783 4.53266398526018 4.36410554789074 5.14586216521930 4.99219821696897 5.14896372889717 5.14503533685568 5.87340365466549 5.20834118679342 6.01200131710743 6.47810470152178 5.53340052781898 5.89603462784974 6.21690504210977 5.9768172358981 5.34917751287886 5.39222403040752 6.01455951886851 0.187357560446058 0.185762248235925 0.184099313886424 0.191048024119997 0.185052467748661 0.174287048284034 0.185330711340008 0.190023080642037 0.182368508229327 0.186369419067891 0.17397325687018 0.182462119971132 0.181393077665040 0.184375401743672 0.179631896552184 0.172468389303950 0.180232456882405 0.172468389303950 0.187740503373960 5 5|0 -|/ 4578584 4579168 4578849.5 4578380 4581376 - gene protein_coding_gene TRUE TRUE AT5G14210.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G03770.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81107.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78913.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -1.11198994954208 -13.3405830223802 5.9168425667267e-08 0.000278564948041493 12.2047311962671 10.7559891182788 -1.11198994954208 0.0415571379715094 107 83 AT5G11150_at 7.3501202171625 7.58463612175349 8.3084521249321 8.06141632141901 9.84386783817906 8.58896620593911 4.85010550720891 4.88572148010978 2.05481642993887 2.69143159905886 6.31558705744278 5.88118444772291 6.66683280794505 6.64763438045793 5.96485176728749 5.21064779085677 6.41393823804328 5.83108519464482 2.34598855977339 0.259541360259409 0.257435285862052 0.26665176130275 0.263991278788867 0.273927533443285 0.266486541093003 0.262216292047439 0.258002093831296 0.265443043128152 0.257435285862052 0.257435285862052 0.257435285862052 0.257435285862052 0.264922024997896 0.260546422333125 0.264318558367398 0.279347232901101 0.267298518060846 0.261250873724882 5 5 - 3546642 3547755 3547245.818 3546287 3548112 - gene protein_coding_gene TRUE TRUE AT5G11150.1 ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 713 (AtVAMP713) (VAMP713) [Arabidopsis Thaliana] (GB:Q9LFP1); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Lon (GB:ABE77680.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 2.12687627559645 13.3316054284744 5.95694267206021e-08 0.000280393291573874 12.2015952271166 11.6744352638249 2.12687627559645 0.225108865568233 108 84 AT5G18470_at 7.53441389859938 8.52812395516305 10.1946066351717 10.1539527465377 8.97377319989547 8.83374156216936 1.35956117320991 0.68128922488573 4.18751442960408 1.53146926658725 2.52282346671525 4.95073413220012 2.52829769262592 3.56073429446538 2.56551776560573 3.13329718919301 2.38340273730737 2.98903319889725 1.06732235673665 0.257482340353049 0.251068445121788 0.246700921847535 0.255573569172927 0.246700921847535 0.246700921847535 0.247113813916389 0.250536688454564 0.271865349695544 0.246700921847535 0.246700921847535 0.255135137681517 0.254219576278132 0.252983294172127 0.247766712804645 0.246700921847535 0.253521319764916 0.249841861315191 0.253548594817361 5 5 + 6128766 6129136 6128926.364 6127799 6129287 + gene protein_coding_gene TRUE TRUE AT5G18470.1 curculin-like (mannose-binding) lectin family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67520.1); similar to Receptor protein kinase, putative [Solanum bulbocastanum] (GB:ABG29323.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 2.00884934606127 13.2679585622315 6.24986756866266e-08 0.000294118767781265 12.1792429086675 9.7030988380885 2.00884934606127 0.209730123413740 109 85 AT5G25210_at 6.67239413521113 6.64996769269919 6.57882028991449 7.12767846918029 8.63976374376027 8.26527928916878 2.43375924846595 2.47788081035337 3.0643443584175 2.8798442817626 4.57617083030076 4.11296417397163 4.24197322587465 4.56661202099567 4.33989942925153 3.59191103214351 4.46555121214628 4.33645893799222 2.3295765013254 0.303075955874047 0.303145537319627 0.319022202831601 0.309593776990286 0.30551684870746 0.312910662904011 0.307039875603143 0.297890124101137 0.296127399623461 0.29193416736811 0.29193416736811 0.29193416736811 0.300559879342585 0.293776652845687 0.29193416736811 0.29193416736811 0.314899719282765 0.29193416736811 0.301922594170971 5 5 + 8724104 8725407 8724605.182 8723961 8725774 + gene protein_coding_gene TRUE TRUE AT5G25210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32030.1) 1.40752260340613 13.2285633964011 6.43901685903054e-08 0.000302955743217387 12.1653017128495 9.62412512067903 1.40752260340613 0.115303449284434 110 86 AT5G20960_at 5.77497268590445 6.03497600845176 7.15396706754655 7.229278511774 7.50717254366206 7.08858887756936 2.38174000388624 2.63774332087171 2.87678045163857 2.91921481034107 4.42398596448085 4.38867363981729 3.80228461830634 4.71602497667756 4.54919620720895 3.87138320312147 4.65476929559401 4.37134379076812 3.23369989713544 0.249396435793609 0.245306089761075 0.247474592062812 0.247753322881034 0.247156654836615 0.250198704172761 0.246709730590124 0.247408048232401 0.262679060875274 0.245931601081088 0.240566433758968 0.240566433758968 0.249257541782311 0.245847424940821 0.244546903004257 0.244229232567205 0.252248258882802 0.246829412083071 0.240566433758968 5 5|0 +|/ 7121496 7122229 7121870.333 7116740 7122776 + gene protein_coding_gene TRUE TRUE AT5G20960.1|AT5G20960.2 AAO1 (ALDEHYDE OXIDASE 1) Encodes aldehyde oxidase AA01. Identical to Aldehyde oxidase 1 (EC 1.2.3.1) (AO-1) (AtAO-1) (AtAO1) (AAO1) [Arabidopsis Thaliana] (GB:Q7G193;GB:O49155;GB:O64417); similar to AAO3 (ABSCISIC ALDEHYDE OXIDASE 3) [Arabidopsis thaliana] (TAIR:AT2G27150.2); similar to AAO4 (ALDEHYDE OXIDASE 4), aldehyde oxidase [Arabidopsis thaliana] (TAIR:AT1G04580.1); similar to AAO2 (ALDEHYDE OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT3G43600.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93768.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93767.1); similar to aldehyde oxidase [Lycopersicon esculentum] (GB:AAG22607.1); contains InterPro domain CO dehydrogenase flavoprotein, C-terminal; (InterPro:IPR005107); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; (InterPro:IPR000674); contains InterPro domain [2Fe-2S]-binding; (InterPro:IPR002888); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; (InterPro:IPR008274); contains InterPro domain Molybdopterin dehydrogenase, FAD-binding; (InterPro:IPR002346); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 1.30516155247284 13.1504622265162 6.83270892371524e-08 0.000321410627771565 12.1374212314687 9.40460792664252 1.30516155247284 0.0969760298418929 111 87 AT5G62670_at 8.17024585740149 8.41213412278105 7.47015294679296 7.67331368668251 7.21391957027526 7.53383937363818 9.1771687265316 9.51839209557826 9.70467806397326 9.14402633244272 9.97210749655632 10.0548883762208 9.4379933480556 9.32248516842 10.057817556849 9.69078572650673 8.72893100575322 9.99884847145398 9.06722208465252 0.184402412915862 0.173303180662755 0.198153458046134 0.193589682140932 0.200026274491789 0.201756170473259 0.177137429751007 0.176710130918005 0.181888055991629 0.182057021876396 0.17761824697769 0.177182965531727 0.173311938110023 0.176963677494203 0.178125273341842 0.172710838220873 0.180640784910452 0.175146148361381 0.174335041455003 5 5|0 +|/ 25181248 25182092 25181674.2 25176456 25182435 + gene protein_coding_gene TRUE TRUE AT5G62670.1 AHA11 (ARABIDOPSIS H(+)-ATPASE 11); ATPase Identical to ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump 11) (AHA11) [Arabidopsis Thaliana] (GB:Q9LV11); similar to AHA3 (Arabidopsis H(+)-ATPase 3), ATPase [Arabidopsis thaliana] (TAIR:AT5G57350.1); similar to AHA4 (Arabidopsis H(+)-ATPase 4), ATPase [Arabidopsis thaliana] (TAIR:AT3G47950.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to plasma membrane H+-ATPase [Juglans re (GB:AAQ55291.1); similar to plasma membrane H+ ATPase [Prunus persica] (GB:CAB69824.1); similar to H+-translocating ATPase (GB:AAA34052.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain Plasma-membrane proton-efflux P-type ATPase; (InterPro:IPR006534); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) -1.29644298675340 -13.0286472654044 7.50008674135129e-08 0.000352729079445751 12.0932845401001 17.6277912828351 -1.29644298675340 0.0976749539324803 112 88 AT5G65300_at 2.96996808309014 2.94669709287179 3.66601581223787 3.89718881097992 4.41230449357885 4.55067625790114 1.95984992074675 1.64435635491281 1.59526444680360 2.40193095782555 3.24180042265604 4.14009754231744 3.08729148564887 3.02796000728038 4.07583117758768 3.98552222312774 3.17276597338392 3.84489022328701 2.23540960805090 0.28287267513126 0.28287267513126 0.290347043468109 0.291084709479487 0.293910373570348 0.294946829397107 0.289697187123308 0.299494356479402 0.292996901363491 0.292573206424620 0.28287267513126 0.296555958062785 0.285120983425267 0.287719994641232 0.284033902459593 0.28564972541244 0.28287267513126 0.28287267513126 0.2839366400915 5 5 - 26112498 26112910 26112753.273 26112373 26112997 - gene protein_coding_gene TRUE TRUE AT5G65300.1 similar to Avr9/Cf-9 rapidly elicited protein 75 [Nicotiana tabacum] (GB:AAG43558.1) 1.17615022806811 12.9491127311314 7.97396838327708e-08 0.000374935993381688 12.0640316970053 6.08065954635882 1.17615022806811 0.0719094562362878 113 89 AT5G52910_at 5.05413932662967 4.73202112319401 5.43719379142498 5.38517863296554 5.72593868938358 5.92641376966303 2.98038950767658 3.06898112523736 8.30371350355472 5.3570227630694 5.2153204200787 4.26709236463698 3.50430319037701 3.98758874063529 5.2563375712524 3.60110557164063 3.27680111100368 4.18862555174123 5.15812493921474 0.245530340688785 0.247613234246542 0.256848982174593 0.246894005322019 0.256003709066194 0.254432012418757 0.248795506252866 0.251627885844824 0.277060663450231 0.250815545376043 0.244392497416143 0.245642359960023 0.251781084724626 0.247030470708733 0.249447336090201 0.250400042783887 0.251860774086279 0.252563249329254 0.245101073557375 5 5 - 21475045 21475712 21475344.818 21474853 21480385 - gene protein_coding_gene TRUE TRUE AT5G52910.1 ATIM (TIMELESS) homolog of Drosophila timeless similar to Timeless protein; Timeless C-terminal [Medicago truncatula] (GB:ABE87103.1); similar to Os05g0210500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054915.1); contains InterPro domain Timeless protein; (InterPro:IPR006906); contains InterPro domain Timeless C-terminal; (InterPro:IPR007725) -1.15344443119617 -12.8603984680688 8.54134299891366e-08 0.000401528534378931 12.0309896602619 10.0063322709970 -1.15344443119617 0.0680226894477464 114 90 AT5G54930_at 5.22348744881399 4.90259099174651 7.28224487910028 7.12337611145887 7.38397897545408 7.31377772973766 3.57120082671326 3.90070804915746 2.41323704052879 2.99681914990674 3.86983100645645 3.53039706641251 4.15432270807331 3.91918864007419 3.61018024343783 4.04190575958617 5.36499844302075 3.87472903035200 2.83580171583683 0.23152351773817 0.230159741954510 0.238467107971196 0.231814624321775 0.239069415991843 0.23932774614315 0.233254390633104 0.228642579577046 0.235963216285857 0.24480980929327 0.236073905437801 0.227946667843847 0.232223212989403 0.234909283329272 0.24027642393743 0.230455752647941 0.248917515744664 0.232211546456813 0.242570915543571 5 5|0 -|/ 22323283 22323753 22323444.3 22322959 22324788 - gene protein_coding_gene TRUE TRUE AT5G54930.1|AT5G54930.2 AT hook motif-containing protein|DNA binding similar to AT hook motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G52890.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 1.21908335544056 12.8277582715400 8.76103604929182e-08 0.000411768694316716 12.0187217851066 9.23482733365648 1.21908335544056 0.0850818544198536 115 91 AT5G41900_at 2.41043764041415 1.97120357811425 4.79352268445055 4.67865301324945 6.36811406053846 6.05398548004156 5.13899208690724 5.29119135203348 4.93897025131611 4.75715797209522 8.26568478871884 7.50282407370665 7.59616487800371 8.2840378866835 7.65687857218516 6.55447070361318 6.12241815565019 7.10895712515114 4.30562584426478 0.226597855173991 0.229754065600736 0.220770334110901 0.221982457218311 0.208632034108011 0.224100241785276 0.211113404786537 0.211192658901386 0.212099600951242 0.216722890377500 0.219338112125733 0.214207375241982 0.215482364256649 0.230116337895999 0.213271893417025 0.208632034108011 0.215090260680613 0.213857707822114 0.209685675567758 5 5|0 +|/ 16787455 16788630 16787998.6 16786181 16788924 + gene protein_coding_gene TRUE TRUE AT5G41900.1 hydrolase, alpha/beta fold family protein similar to BDG1 (BODYGUARD1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G64670.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO33147.1); similar to Os10g0532200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065147.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 1.28071489124235 12.8019975807668 8.93877040620068e-08 0.00042003282138737 12.0089971002041 10.6151029263967 1.28071489124235 0.0991050358037362 116 92 AT5G02200_at 1.87831679844975 1.89772819286303 2.75460286743735 2.74391316336387 4.08934817182102 3.9251241441262 1.32698195875314 1.41121022377091 2.83858418171594 2.09449294060747 4.53143465827057 3.05551459138269 3.92779976576237 3.89442759861440 3.28606558203735 3.29841347352454 2.70711079931669 3.33521917526867 2.46942932006208 0.201224326203967 0.207598796804099 0.211553871717144 0.204447361883031 0.207985891218542 0.214957922315474 0.206400522864063 0.206355454414260 0.202872633668415 0.202366641384646 0.205052345162617 0.208887305865170 0.207228384004085 0.211349389870961 0.208132363090251 0.204019370884822 0.203765237579441 0.201224326203967 0.206620444199421 5 5 + 438275 438821 438474.182 437458 438892 + gene protein_coding_gene TRUE TRUE AT5G02200.1|AT5G02200.2 phytochrome A specific signal transduction component-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37678.1) 1.04456689162118 12.7745618677560 9.13238923768968e-08 0.000429039646386661 11.9985986677938 5.48940336656516 1.04456689162118 0.0321690904037861 117 93 AT5G09530_at 3.63151817021718 3.77501062744873 1.73992234102783 1.41139557838919 2.52534523519965 2.66417696876621 2.76026114932969 1.88313617764941 2.24697072360783 6.61806548564378 1.95331627892695 1.27187522920362 1.81851746600227 1.80364524386403 1.98972919321985 1.77388672175261 1.91352920681604 2.17751676534619 1.8740736047631 0.192221468490958 0.184625693979075 0.185693881038458 0.188775897599584 0.181591011824487 0.184114843486521 0.185849978382767 0.182874721843499 0.181801540657822 0.191308108642585 0.190651408402490 0.181591011824487 0.18565530090346 0.18238556879321 0.189102886136575 0.189716437342559 0.189009836796273 0.185233968294385 0.181776470026928 5 5 - 2960131 2960617 2960314.909 2959735 2961272 - gene protein_coding_gene TRUE TRUE AT5G09530.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G09520.1); similar to hypothetical protein Bcenmc03DRAFT_1196 [Burkholderia cenocepacia MC0-3] (GB:ZP_01566576.1); contains InterPro domain Cell surface antigen; (InterPro:IPR004829) -1.64784074385384 -12.7596016747714 9.23988642498927e-08 0.000433997465381746 11.9929105173236 5.25757342324333 -1.64784074385384 0.165730213674838 118 94 AT5G37740_at 7.5617267744122 7.67321612307873 9.02603574055749 9.19819142088354 9.05728207994768 8.72329350580814 3.0616988758562 3.23016254448083 5.16014694194704 3.6967374180303 5.34800825845649 4.9037966162493 4.49554924077051 5.9416405698161 5.73116636609192 5.52982312669902 5.1893890117493 5.26400940342757 4.73588547195782 0.236735223094504 0.231460217668322 0.239019492489488 0.233858384461018 0.235557454947855 0.243846354135517 0.227919654845587 0.227519319926312 0.246302418895496 0.238213877263609 0.228140952686259 0.228823173457498 0.233318012319092 0.236853546089876 0.237796721745483 0.227133970806493 0.228070681087837 0.227133970806493 0.233048559084742 5 5 + 15009383 15010631 15010151.182 15009235 15010901 + gene protein_coding_gene TRUE TRUE AT5G37740.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G66360.1); similar to C2 [Medicago truncatula] (GB:ABE81436.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.16127414529974 12.7042541877295 9.64973034581971e-08 0.000453151337039694 11.9717548028877 12.1071239338627 1.16127414529974 0.0738267966507263 119 95 AT5G27600_at 5.89711059021306 5.64046163427241 7.7704042719195 7.701505824663 6.88853558940574 6.92743759095669 4.71475861928559 4.42404218386081 3.9274687257023 4.64753175575358 6.14783279070402 5.88397036628675 6.58259942123805 6.14356400918523 5.56866344924412 7.21538439050507 7.12029451571946 6.49636151183363 4.18880820490491 0.221393353481108 0.21967028315056 0.216155210198159 0.212236564818085 0.216586184260167 0.211948222259095 0.22750904792929 0.225357648597434 0.230576004624768 0.224450457142166 0.210700222117219 0.213680656934762 0.220285993024073 0.214619299306262 0.217458421583353 0.210699250729876 0.215500162002323 0.215993756328748 0.221592020676520 5 5|0 +|/ 9745823 9746755 9746316.556 9742579 9747008 + gene protein_coding_gene TRUE TRUE AT5G27600.1 LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. similar to LACS6 (LONG-CHAIN ACYL-COA SYNTHETASE 6) [Arabidopsis thaliana] (TAIR:AT3G05970.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96460.2); similar to AMP-binding protein [Brassica napus] (GB:CAA96522.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96461.2); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 1.13552318055049 12.6415556487484 1.01380708250319e-07 0.000475982425235247 11.9475754186686 11.5702503892187 1.13552318055049 0.0684922931902675 120 96 AT5G22500_at 1.51521362600432 1.36704240810991 5.00300821914798 5.37437923279479 8.77815419224862 7.49152943487484 1.64266135075861 1.28225508783302 5.06695135698699 3.05617609698083 5.8286127278715 4.19167883065706 1.98120973384279 3.69363054179937 5.54411543878443 2.51132284394901 3.12896438302791 4.6992983672066 2.31135653318924 0.264127772187354 0.264609899159293 0.283662679577289 0.27535612576507 0.267212345030934 0.281221387799499 0.276519666770369 0.264127772187354 0.285535808523938 0.266592337836129 0.264127772187354 0.264127772187354 0.269695483671009 0.27491928485823 0.272497417437599 0.264163878494168 0.264127772187354 0.276064142434499 0.264327583359949 5 0|5 /|+ 7472923 7473864 7473279.889 7470446 7474123 + gene protein_coding_gene TRUE TRUE AT5G22500.1 acyl CoA reductase, putative / male-sterility protein, putative similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44550.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44540.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44560.1); similar to acyl CoA reductase [Simmondsia chinensis] (GB:AAD38039.1); contains InterPro domain Male sterility; (InterPro:IPR004262); contains InterPro domain Male sterility C-terminal; (InterPro:IPR013120) 2.12538061280282 12.6302163622271 1.02292294313153e-07 0.000480160029505941 11.9431780343956 7.76953816269386 2.12538061280282 0.241358036165251 121 97 AT5G60490_at 1.43957932324330 1.52757414974390 2.635305532684 2.69353211677415 2.28318853672019 2.52217869015202 1.89991643827953 1.67832001617986 1.85756421362807 1.94898421062248 3.50748794857856 3.72075150726956 3.51564627617624 4.52564179309366 4.25547500476554 4.02186035247677 4.91335746143314 3.75808265203811 2.59172130737586 0.268434961461790 0.269429100526170 0.270520265253671 0.262518259450712 0.262518259450712 0.284366779460654 0.276260780633238 0.263386459138129 0.271186134076259 0.262518259450712 0.267769466375751 0.263851946714772 0.264575554964906 0.282100557265544 0.269630611758099 0.267651252708771 0.269647034210894 0.264511003063431 0.262518259450712 5 5 - 24343176 24343695 24343462.091 24342953 24343928 - gene protein_coding_gene TRUE TRUE AT5G60490.1 FLA12 (fasciclin-like arabinogalactan-protein 12) Identical to Fasciclin-like arabinogalactan protein 12 precursor (FLA12) [Arabidopsis Thaliana] (GB:Q8LEE9;GB:Q94EG7;GB:Q9FKJ8); similar to FLA11 (fasciclin-like arabinogalactan-protein 11) [Arabidopsis thaliana] (TAIR:AT5G03170.1); similar to unknown [Brassica rapa] (GB:ABB97042.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 1.09561442561073 12.5480608206075 1.09169689979833e-07 0.000512333355075357 11.9110923148235 5.16497157631599 1.09561442561073 0.0592834592930859 122 98 AT5G57780_at 4.49172613284193 4.55724420009674 2.72822123650317 2.82940033985597 4.53734347042549 4.98351777722646 5.40877854422785 5.41314564609055 6.44889177392261 5.81906237595599 7.635929517181 7.81938472962375 7.38559215155419 7.50381308634549 7.7582356410487 7.6292862336697 5.99527349083436 7.15277553745609 7.25089384308823 0.282460461216231 0.266157075165097 0.287110481477224 0.290338323557142 0.262794368851567 0.286221356323615 0.266724856903714 0.277047859866144 0.264485759649922 0.273804034241161 0.271068034924201 0.269219775260021 0.266458284111294 0.262794368851567 0.272817394042124 0.262794368851567 0.271683211450145 0.267490368105863 0.269562735701468 5 5 - 23422757 23423158 23422980.091 23422550 23423577 - gene protein_coding_gene TRUE TRUE AT5G57780.1 similar to transcription factor [Arabidopsis thaliana] (TAIR:AT4G30410.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19120.1); similar to Os02g0178700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046079.1); similar to Os06g0653200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058239.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) -1.17034614573563 -12.5376934789150 1.10072738720500e-07 0.000516461290076588 11.9070150006992 11.3018316498017 -1.17034614573563 0.0799842877601108 123 99 AT5G14450_at 4.33240791775217 4.62875079404023 2.59333244402866 3.21203888168427 3.80420460738791 3.78907569196474 4.443706002316 4.59112038985534 5.21192460159058 4.15387446187778 5.25729925126772 5.28880582651651 4.61876268528503 4.69412616938556 5.09933011972591 4.30445203217913 3.67633382740152 4.90595989790583 4.69320068330033 0.212722726686345 0.212337738833134 0.213144079106156 0.214541472315598 0.216743587281304 0.212778833407802 0.214822338832956 0.212454358636848 0.219992721902929 0.221302765969645 0.211518427813147 0.212740315902144 0.212049923467399 0.211432505049933 0.211432505049933 0.214793855079461 0.212871990362260 0.214046657102617 0.211502693203693 5 5|0 +|/ 4659287 4659979 4659643.3 4658444 4660178 + gene protein_coding_gene TRUE TRUE AT5G14450.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G26430.1); similar to Os07g0586200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060129.1); similar to hypothetical protein [Zea mays] (GB:BAD89850.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -1.36366181422832 -12.5155420945350 1.12029611713473e-07 0.000525530908547902 11.8982817590305 8.63281307869431 -1.36366181422832 0.121456347007141 124 100 AT5G08600_at 2.60833965931544 2.08363317270771 4.12916132334882 4.16641248167407 4.65270734105353 4.73443053920996 2.74160322265758 2.82509364636784 2.43309277045389 2.68805264599512 4.42155821496838 4.21834213981835 4.27186922604139 4.06893722057149 4.57652684200689 4.05523152998751 4.47227412149225 3.80904919085895 2.37936027580104 0.255745721793705 0.238663634202207 0.234659881789939 0.239033865652448 0.239901097539669 0.242138816232019 0.235311322547859 0.234659881789939 0.245130665260595 0.244219715410405 0.23600102580722 0.235132056393066 0.242554036408310 0.237923442209623 0.237687145389873 0.242067831704034 0.241000511363347 0.236273904117977 0.236452594832701 5 5 + 2789030 2789674 2789391.091 2786268 2789872 + gene protein_coding_gene TRUE TRUE AT5G08600.1 U3 ribonucleoprotein (Utp) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02400.1); similar to hypothetical protein DEHA0A03355g [Debaryomyces hansenii CBS767] (GB:XP_456468.1); similar to Os03g0343300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050076.1); contains InterPro domain Utp14 protein; (InterPro:IPR006709) 1.22367306273315 12.5006188465601 1.13369283382997e-07 0.000531701939066256 11.8923817095337 6.86111873569261 1.22367306273315 0.0932496313010743 NA NA AT5G56860_at 5.67631057908685 5.62588410550391 6.42915134633016 5.86364811965475 6.1287679854618 5.58044256097614 7.58452485926914 7.46157091804421 6.99444486858109 6.71474696691361 6.84483041136472 6.82381212509095 6.59310253293986 6.71000818106998 6.27259463797428 7.42926372112855 6.61140980453612 6.55940591620322 7.15678778224814 0.211369051179571 0.206862317674191 0.213491140271285 0.232741135849205 0.209865546063057 0.219735034421289 0.210509908002922 0.216040475331689 0.211911493603452 0.203930905778215 0.207822793875796 0.204547033660413 0.206682014820140 0.220351109361768 0.215588614591763 0.205015151548199 0.216641499261809 0.209268748422818 0.208712625325103 5 5|0 -|/ 23006870 23007579 23007156.9 23006491 23008693 - gene protein_coding_gene TRUE TRUE AT5G56860.1 GNC (GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED); transcription factor Identical to GATA transcription factor 24 [Arabidopsis Thaliana] (GB:Q5HZ36;GB:Q8VZC1;GB:Q9LV39); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT4G26150.1); similar to zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87039.1); similar to Os06g0571800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057917.1); similar to Os02g0220400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046316.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) -1.45160619998152 -12.4844460071825 1.14840853272740e-07 0.000538488760995879 11.8859725583396 13.1367275370589 -1.45160619998152 0.138239719246587 NA NA AT5G61330_at 6.6335669787039 6.45007046153455 6.2084601768517 5.75946000699203 6.44647506682058 6.11748084047843 6.30704406615526 6.73518117669918 6.87713205083007 7.06841571448202 6.85943614711112 7.58498970240953 6.75173065629702 7.03085782585885 7.03051187477469 6.83254314308539 5.81560986683782 6.68181902465483 7.34881007972982 0.206447229235825 0.206140257915293 0.219542755367614 0.217611389176505 0.201820271463896 0.233987422229987 0.224712957316335 0.224433466840440 0.220185585329165 0.206901273537685 0.20839292396006 0.202974605999433 0.223303397983277 0.207477059120865 0.219184757195765 0.204370180351186 0.209613383144679 0.224585413932414 0.220122710240256 5 5|0 -|/ 24674536 24675502 24674942.625 24674374 24678247 - gene protein_coding_gene TRUE TRUE AT5G61330.1 rRNA processing protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47970.1); similar to hypothetical protein DDBDRAFT_0201701 [Dictyostelium discoideum AX4] (GB:XP_645916.1); similar to Os01g0526200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043227.1); contains InterPro domain TRAUB; (InterPro:IPR012617) -1.38146876889149 -12.4769376034624 1.15531101701965e-07 0.000541609804778813 11.8829917071097 13.2929956276841 -1.38146876889149 0.125606063803897 NA NA AT5G53760_at 3.78199438770027 3.74545791445982 5.2619491959148 5.23424459061084 5.62418181330576 5.56948298285336 5.28046067473579 5.31994790323723 2.64182684782528 4.35843946869197 6.8263717162528 6.22966863071954 6.76641024886302 7.15917263766528 5.7284535567932 6.55204522269118 6.66654112728436 6.52143716606508 3.81474070305773 0.257373631227376 0.257650441976531 0.260877077775836 0.257565592776506 0.249937414130586 0.257886134277086 0.266291430285449 0.254871332707627 0.27446109225427 0.254463836712359 0.264514062918366 0.249053209894101 0.251211757402993 0.263165114260732 0.250648816495699 0.249053209894101 0.264339267726494 0.25709265878733 0.264808114178986 5 5|0 +|/ 21842806 21843481 21843120.4 21839712 21843677 + gene protein_coding_gene TRUE TRUE AT5G53760.1|AT5G53760.2 MLO11 (MILDEW RESISTANCE LOCUS O 11); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Identical to MLO-like protein 11 (AtMlo11) (MLO11) [Arabidopsis Thaliana] (GB:Q9FI00); similar to MLO14 (MILDEW RESISTANCE LOCUS O 14), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G26700.1); similar to OSJNBb0017I01.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE05742.1); similar to H0901F07.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86271.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 0.989531962876576 12.3979200021719 1.23075482272176e-07 0.000576854785409689 11.8514150351834 10.0578473719273 0.989531962876576 0.0141160661684871 NA NA AT5G63790_at 9.04640637944937 9.16179877288962 10.4306127568930 10.5469180178878 10.1697578619161 9.5473022597648 7.97563783261817 8.1004340904785 7.31214258297029 6.91718487768768 9.41965460065649 9.6146827592900 9.57390717978544 9.83313771687848 8.92288872887714 9.8911995546668 9.56222241125871 9.70168091473165 6.66641691590414 0.160270453810821 0.148633064338067 0.146970281789809 0.155016286054112 0.156392945367711 0.144762988044105 0.161666614160440 0.149048086954421 0.176058099279081 0.172101769420004 0.144762988044105 0.156254065914657 0.156009298799393 0.150853200201041 0.154594504213689 0.153812084450112 0.146575166519169 0.151497596357284 0.180676235892336 5 5 - 25544147 25544685 25544334.727 25543735 25545239 - gene protein_coding_gene TRUE TRUE AT5G63790.1 ANAC102 (Arabidopsis NAC domain containing protein 102); transcription factor similar to ATAF2 (Arabidopsis NAC domain containing protein 81) [Arabidopsis thaliana] (TAIR:AT5G08790.1); similar to NAC-domain protein 5-1 [Brassica napus] (GB:AAP35050.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.30234434527586 12.3270566951633 1.30298906933363e-07 0.00061058067788974 11.8227730848453 17.6374434258816 1.30234434527586 0.113462033727617 NA NA AT5G10350_at 7.53921668620066 7.38177996416538 7.17127439945732 7.01162846409851 7.54878169479986 7.15318883673184 7.53391103365986 7.72750736385223 7.46237205754034 7.56101922420906 7.83866178159503 7.3975754533187 7.14880792779232 7.78908449558724 7.6066082914445 7.31735973441732 7.60332955747315 7.23286020015734 7.55847563500364 0.159788455261121 0.150094521798833 0.156814775556023 0.159071997621005 0.149786615795835 0.153320105857862 0.156231220444675 0.149227846207234 0.166541248897468 0.152638451345672 0.152734127959165 0.155563672420673 0.150248434568013 0.153989859289773 0.155720103377231 0.150016397737371 0.152381684661961 0.149949403019705 0.153035993179305 5 5|0 -|/ 3255680 3257667 3256572.857 3255435 3257808 - gene protein_coding_gene TRUE TRUE AT5G10350.1|AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -1.16880073570349 -12.2792101456994 1.35436540319223e-07 0.000634520191395558 11.8032589330202 14.8929485066078 -1.16880073570349 0.0855258479631914 NA NA AT5G15580_at 3.7419890294638 4.19912256861632 2.03759285265716 2.00695538928636 3.37330163687526 3.15747335838765 3.32319939237107 3.32248381329760 5.71560905362855 4.31922836761469 6.27496028588613 7.15520408322402 5.49416914810604 5.97438651456836 7.20470998017626 6.23931483559985 3.76439970178442 6.13858257631313 6.99581979064074 0.251068138380737 0.251068138380737 0.264113806475126 0.258169733011567 0.254395005069468 0.253813304171432 0.257484649994846 0.251068138380737 0.251919315215056 0.251068138380737 0.251440521421953 0.253196683126686 0.251068138380737 0.251068138380737 0.253957455713377 0.253751663716122 0.251068138380737 0.252713833320604 0.260589313497946 5 5 - 5068510 5069073 5068781.364 5068304 5072495 - gene protein_coding_gene TRUE TRUE AT5G15580.1 LNG1 (LONGIFOLIA1) Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function. similar to LNG2 (LONGIFOLIA2) [Arabidopsis thaliana] (TAIR:AT3G02170.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96924.1); contains InterPro domain Moesin; (InterPro:IPR008954) -1.17097440259685 -12.2089897982619 1.43380175459758e-07 0.000671592741853507 11.7743609429919 8.99906556912037 -1.17097440259685 0.0876436168588802 NA NA AT5G60460_at 6.35649153647527 6.67083806855082 7.78595531796631 7.82959406133162 7.7154529140984 7.4331675714973 4.65445929293391 5.07851223588041 5.15685596798604 4.90443488960463 7.67551817211876 8.22960128905799 7.69385978369423 8.0737130046017 7.4171133918126 7.72528024193267 7.41356831251746 6.48595374952341 4.99549414171259 0.25713910088859 0.255072146493498 0.256678765835267 0.253776090054481 0.251712026804879 0.251543814608937 0.276509291553768 0.258923057379000 0.273316036321308 0.259678583475904 0.252972130260957 0.254933345592872 0.25772761022364 0.262271786075632 0.251543814608937 0.252091237456288 0.254224690615035 0.264003753856911 0.256366363774973 5 5 - 24334817 24334982 24334901.818 24334663 24335161 - gene protein_coding_gene TRUE TRUE AT5G60460.1 sec61beta family protein similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.2); similar to Sec61beta [Medicago truncatula] (GB:ABD33060.1); contains InterPro domain Sec61beta; (InterPro:IPR005609) 1.23935700918624 12.1685291549110 1.48186514112218e-07 0.000693957445587516 11.7575689766300 12.9946860379710 1.23935700918624 0.103865096111087 NA NA AT5G52050_at 1.27517245458616 1.41513688408149 3.02139574465838 3.31047776188881 2.97119352160132 3.31235260629220 1.99440525400487 2.15461407435276 1.84456993026014 1.69817315682554 3.11519127408828 2.82888573563199 2.93315260765313 2.98551286106410 2.74707977541335 3.4565486614356 3.92674165425606 3.55213330025282 1.88847708511093 0.218446528983408 0.215793924571083 0.218334830791383 0.218216725904074 0.211047804434438 0.227241948469207 0.216740126064303 0.213347674963361 0.227208891122360 0.212892163608531 0.209888870882532 0.215053633536606 0.214219857778943 0.214605275031103 0.217888587144612 0.214367570187304 0.210313945827193 0.217322934666281 0.2177305695954 5 5 + 21157102 21157593 21157328.727 21156088 21157869 + gene protein_coding_gene TRUE TRUE AT5G52050.1 MATE efflux protein-related similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G23030.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE90557.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 1.14301044167523 12.0010026102117 1.70038212252074e-07 0.000796118909764212 11.686926017061 4.93362476657822 1.14301044167523 0.0856952369476158 NA NA AT5G03350_at 12.4361123386074 12.7850525013316 12.7188714540432 12.826275394014 12.0058608892135 11.7809447186778 8.43749090779501 8.87508397735107 10.2732547357703 6.67487340391281 10.3487359270329 12.1004229189709 8.28386281204416 10.5634514499325 9.94025070329302 9.74898613485188 9.27592570094672 11.2328477000422 7.52197352967188 0.141855432257049 0.139400716927164 0.142351384830882 0.143462159602713 0.138037036202094 0.139739827850526 0.150148601129060 0.156865022294691 0.14595845863977 0.203054182883286 0.145505955401988 0.141493146918283 0.151223568752337 0.138037036202094 0.144494593112996 0.143550544312033 0.149841744099076 0.138037036202094 0.176782640713797 5 5 - 815813 816278 816046.545 815673 816657 - gene protein_coding_gene TRUE TRUE AT5G03350.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16530.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 1.22818330011649 11.9603715918496 1.75851052361562e-07 0.00082315877610447 11.6695176499487 20.6549670100497 1.22818330011649 0.106026148386629 NA NA AT5G19730_at 2.43258923980150 2.69275371432482 2.42304088974694 2.22080959393373 2.31877241817118 2.39002219940278 3.89695868204522 3.82971004840801 3.55760532018670 4.79578805860127 4.68249372268798 5.34891225726606 4.37361715191643 4.02164821589428 5.63529651573755 4.73767361144908 3.36784373039970 4.2284029539706 5.05056687431396 0.243670730262081 0.242182860127899 0.247918508427057 0.247950610003564 0.250612380170721 0.262724225905502 0.242408436033506 0.247897517856513 0.248276523604414 0.247164043383814 0.249188076645325 0.242182860127899 0.245652638240154 0.249035954746395 0.246224702613704 0.250337063327763 0.253355545243099 0.250062846500414 0.243665102300243 5 5|0 +|/ 6672142 6673159 6672545 6670460 6673284 + gene protein_coding_gene TRUE TRUE AT5G19730.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to Os05g0521600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056077.1); similar to pectinesterase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87905.1); similar to Os01g0743200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044216.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -1.04033397087647 -11.9076220756463 1.83722471970740e-07 0.000859821168823062 11.6467544328818 7.28431848370387 -1.04033397087647 0.0594920458161892 NA NA AT5G18525_at 5.54328391239372 5.79115464783283 7.02297823040637 6.9637077801492 7.5307956237398 7.41563721398941 3.33978277797626 3.62630549660024 4.12769599608801 4.02899897928445 5.36634519440437 5.4905793361849 5.29283187154615 5.86535247574224 5.15912378991008 5.61509136139221 5.52026582298898 5.48489777289426 4.00512264591143 0.24206681217965 0.244309670203631 0.251933306285148 0.252772345300613 0.244017105140372 0.254874382650186 0.248596141600170 0.241952464080449 0.25661244177123 0.244170346883336 0.245231936544003 0.244428198433901 0.242782178190555 0.242839659330256 0.240996347167115 0.239891083178681 0.251392559547377 0.244418279480885 0.240943329521187 5 5 - 6147057 6147779 6147474.909 6146746 6149757 - gene protein_coding_gene TRUE TRUE AT5G18525.1 WD-40 repeat family protein similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52616.1); similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52617.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.07226258187115 11.9067149687982 1.83861142309955e-07 0.00086028628486828 11.6463613687554 10.6683307904997 1.07226258187115 0.0692888086375214 NA NA AT5G26340_at 11.0999587840349 11.1990532338906 12.0831563793466 12.0678823553370 12.008006796417 11.5762986216021 9.48311269385755 9.13233564676455 5.35155217056042 6.52421477343915 7.51617666521161 6.44048964817836 9.03123480002596 8.74988151167545 6.07318694399801 7.96390824341378 9.62542496726219 8.73676035522769 5.57955571565643 0.213643457729148 0.214951440570129 0.219597963794139 0.21773369529438 0.218338880682831 0.223210026975549 0.216249838570278 0.213643457729148 0.266912983587168 0.23036641721435 0.219771800426430 0.247815495137554 0.213643457729148 0.222098667328524 0.250309913745353 0.224716805165297 0.231277316815228 0.220824257292449 0.244818626327426 5 5 - 9244008 9244406 9244224.091 9243514 9247069 - gene protein_coding_gene TRUE TRUE AT5G26340.1 MSS1 (SUGAR TRANSPORT PROTEIN 13); carbohydrate transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose transporter/ sugar porter Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Identical to Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1) (STP13) [Arabidopsis Thaliana] (GB:Q94AZ2;GB:O81501); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT4G02050.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91703.1); similar to hexose transporter [Vitis vinifera] (GB:AAT09979.1); similar to hexose transporter [Solanum lycopersicum] (GB:CAB52689.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829) 1.17750173115476 11.8272375848916 1.96464646706388e-07 0.000919061617292484 11.6117086347606 17.9990124531193 1.17750173115476 0.0978133206018006 NA NA AT5G15600_at 3.03770774870022 3.37010716670629 3.41303229865958 3.45808778279425 2.67142109642859 3.06564498205434 5.23843067451782 5.36646908589339 5.8798648572396 5.62815830240759 6.54784067167683 6.57830239410523 5.79144118941678 6.55311091760533 6.66074624469553 6.62954407365932 5.44879433310676 6.82350767532776 5.76878806716734 0.300201430935912 0.284156640653325 0.291225143126722 0.290671027203841 0.285778030028695 0.297446298884617 0.273844023384541 0.273139288808242 0.276919401037526 0.273139288808242 0.273139288808242 0.278215855019603 0.273902271210327 0.27349803757526 0.273139288808242 0.275712440155905 0.278081527929335 0.273139288808242 0.273139288808242 5 5|0 +|/ 5078419 5078837 5078653.6 5078203 5079094 + gene protein_coding_gene TRUE TRUE AT5G15600.1 SP1L4 (SPIRAL1-LIKE4) SPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion. similar to SP1L3 (SPIRAL 1-LIKE3) [Arabidopsis thaliana] (TAIR:AT3G02180.2); similar to hypothetical protein [Sorghum bicolor] (GB:AAD27575.1) -1.15189819622483 -11.8095229124272 1.99400098028e-07 0.000932594258476956 11.6039269216165 9.77166161099633 -1.15189819622483 0.0922765499291078 NA NA AT5G22640_at 7.9778073908681 8.16318940472732 7.8149722838586 7.80840999448545 8.4408003593186 8.15321559543815 8.58079760986674 8.54495768344004 8.72292540218797 8.89230987900958 8.62459981141822 9.21624905363939 8.35205716152955 8.45507277263038 9.33021896280932 9.02675915487202 8.39417030752084 8.83315516381532 9.0704004484475 0.146284666570767 0.151556214071402 0.15861927635278 0.158681855396044 0.154672867902876 0.155806851427586 0.155048881918359 0.150258876493826 0.171802083105953 0.145403761965824 0.148821265712612 0.148555867957791 0.156146243512371 0.168739355713645 0.154783836231552 0.143903062161242 0.160762100949044 0.154268761137009 0.147335819738107 5 0|5 /|+ 7533325 7533612 7533484.6 7529371 7533787 + gene protein_coding_gene TRUE TRUE AT5G22640.1 EMB1211 (EMBRYO DEFECTIVE 1211) similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G15140.1); similar to Glutamic acid-rich protein precursor (GB:P13816); contains InterPro domain MORN motif; (InterPro:IPR003409) -1.02939797861917 -11.7805526383915 2.04304036406835e-07 0.000955325674238359 11.5911549460808 17.0226423944559 -1.02939797861917 0.0595466617547966 NA NA AT5G53900_at 4.67030078629597 4.86062966350917 4.11151476605219 4.33091432050919 5.51994663681202 5.28775956305746 5.80511500779457 5.45340253552342 5.32848344309383 5.17311696289021 5.58278494191118 6.11586339543102 5.20310529761865 5.04268447724842 5.39415794405223 5.7027388566088 5.23106322183278 4.46439957770184 5.44114143848874 0.252192606615443 0.256839152016426 0.253488836141687 0.242731072403466 0.248745455995431 0.254858650980232 0.257992390557623 0.245444458248588 0.248392745916920 0.258473989355736 0.241791774054970 0.244195557340225 0.244478022669435 0.251720351210271 0.250924108012285 0.246424130093544 0.258245396321374 0.252126468309982 0.262428005575728 5 5 - 21898626 21899113 21898918.364 21898368 21900642 - gene protein_coding_gene TRUE TRUE AT5G53900.1|AT5G53900.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15240.2); similar to Os11g0446000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067826.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93307.2); contains domain gb def: At3g15240 (PTHR13902:SF3); contains domain SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED (PTHR13902) -1.12689781135564 -11.709997078149 2.16805098849562e-07 0.00101356383712170 11.5598095092471 10.3331214077150 -1.12689781135564 0.0885752105560707 NA NA AT5G52750_at 9.44271746941525 9.6586250740241 10.7252941055625 10.8251908705656 10.1213292346146 9.87365135375362 5.66933651080428 6.09101608244146 7.17595656201916 5.38835520579494 6.95087583936915 8.14016626035521 6.09422751924057 7.76873503834842 5.69482574651933 7.44285196687434 7.81425907694167 7.30329748583046 4.27719085450725 0.264778343770096 0.268320673728774 0.268036679240228 0.271729550073812 0.261498151018486 0.278253020885348 0.273228008475476 0.274846377855438 0.284247571430639 0.276903308565844 0.268253409588887 0.267166127106714 0.265149721667899 0.275993607481734 0.282559220670035 0.262459378503777 0.274290134634695 0.278407615326222 0.262822394133838 5 0|5 /|+ 21401743 21401975 21401883.222 21401269 21402150 + gene protein_coding_gene TRUE TRUE AT5G52750.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.14886172911326 11.6991134123367 2.18806480913553e-07 0.00102270149178995 11.5549437749156 15.4333896247103 1.14886172911326 0.094112696859214 NA NA AT5G48030_at 6.81706543905022 6.91041128151434 7.64450319611733 7.6301948081106 6.7690489242214 6.7917271927265 7.5722591085727 7.5144250792605 5.54457432187633 6.74547874117602 5.65989110060266 6.16652373613232 6.95835429222269 6.48221381202792 5.87334394038364 7.27705073912418 7.40352602162976 6.63033517785137 6.76423110791979 0.193962881878144 0.193303250623552 0.197170966214934 0.193303250623552 0.199569384565156 0.193303250623552 0.199877428484587 0.193788300483954 0.230884022947627 0.193303250623552 0.206279819117155 0.209121188946993 0.193303250623552 0.203408585057360 0.203205627519438 0.193635109760222 0.206094373070769 0.200324031747487 0.198239658233489 5 0|5 /|- 19483531 19485111 19484425.714 19483237 19487128 - gene protein_coding_gene TRUE TRUE AT5G48030.1 GFA2 (GAMETOPHYTIC FACTOR 2); heat shock protein binding / unfolded protein binding encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. similar to ATJ1 (Arabidopsis thaliana DnaJ homologue 1), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G28210.2); similar to DnaJ central re (GB:ABE85065.1); contains InterPro domain DnaJ central region; (InterPro:IPR001305); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.934796051279847 -11.6489134301651 2.28301476944972e-07 0.00106685280176385 11.5323946643525 13.6601208334405 -0.934796051279847 0.0195614971413562 NA NA AT5G15800_at 1.80847314005869 1.7392064003335 2.7739704734788 2.47963280135219 3.26175163695234 3.38890147188579 3.68699305287922 3.55901184076074 4.15238819022621 4.34776538806077 2.08231514053071 1.69086323504814 2.61680845588535 2.46164517076726 1.80621408299432 4.95880532091343 2.53230949626310 1.79641846612222 3.26352469309937 0.241577660544762 0.232936274469020 0.234131604090322 0.232722834420289 0.23411109367276 0.234630659929336 0.240320762318486 0.250058625203292 0.244536804382969 0.241504654663559 0.235293388180847 0.233376912614133 0.233209285078898 0.242827370701673 0.237662508941985 0.24687546872008 0.234390586631063 0.235998894672038 0.240821957897420 5 5|0 -|/ 5151598 5153589 5152070.444 5151337 5154157 - gene protein_coding_gene TRUE TRUE AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. Identical to Developmental protein SEPALLATA1 (Agamous-like MADS-box protein AGL2) (SEP1) [Arabidopsis Thaliana] (GB:P29382;GB:Q9LFU6); similar to SEP2 (SEPALLATA2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02310.1); similar to MADS-box protein SEP1-a [Brassica oleracea var. botrytis] (GB:CAD48303.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -1.01609987495377 -11.5805606661923 2.41957785259141e-07 0.00113042677273071 11.5014084078039 6.0444418579765 -1.01609987495377 0.0609336302811017 NA NA AT5G62130_at 5.0183400174174 5.01863924720975 6.64956767961409 6.89685292171898 6.07220963658245 5.86133869723382 7.6432384772651 8.09954869034827 6.26826787460583 5.77599737882676 6.15888813495095 5.77372969922756 6.13202488881028 6.53358704997293 4.78424052130076 6.7206290926086 5.76508003982694 5.13547843835138 5.97881577366591 0.276652811872964 0.261359654486018 0.278824987652848 0.261598329775419 0.258634978853474 0.264614128677042 0.269929891224263 0.256783941678431 0.274814773451669 0.264440353278391 0.261216937370619 0.256783941678431 0.256783941678431 0.256783941678431 0.266333900525835 0.256783941678431 0.275916081001193 0.274913753679547 0.256783941678431 5 5 - 24967931 24968638 24968216 24967543 24970417 - gene protein_coding_gene TRUE TRUE AT5G62130.1 Per1-like protein-related similar to Per1-like family protein [Arabidopsis thaliana] (TAIR:AT1G16560.3); similar to Per1-like family protein [Solanum tuberosum] (GB:ABB72805.1); contains InterPro domain Per1-like; (InterPro:IPR007217) -1.14377276852018 -11.5255960834337 2.53584242914396e-07 0.00118449199865314 11.4762520467999 12.3490423753391 -1.14377276852018 0.096947014999683 NA NA AT5G58770_at 6.42326648425075 6.74558001463659 8.6455333910416 8.93337686603271 7.28629839098474 6.69583097810989 10.5607063686027 10.5131346036333 9.0516797056173 9.7993157312454 8.72873176614873 8.00353495140773 9.48643104897943 9.58183260599156 6.97463750863837 10.4815507712897 10.1687882838739 9.6441405232276 9.37798512124503 0.241108935723544 0.227959923219176 0.223208418962790 0.236869002895550 0.225162742252678 0.239392382335884 0.225734492440383 0.226584491104283 0.247475991165699 0.223208418962790 0.228628991168108 0.229726216005679 0.223208418962790 0.223801310571326 0.237983292886624 0.224056296508986 0.230848316531873 0.223208418962790 0.223316757437856 5 5 + 23751955 23752685 23752388.455 23751602 23752860 + gene protein_coding_gene TRUE TRUE AT5G58770.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative Identical to Dehydrodolichyl diphosphate synthase 2 (EC 2.5.1.-) (Dedol-PP synthase 2) [Arabidopsis Thaliana] (GB:Q56Y11;GB:Q9LUY4); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58782.1); similar to Os01g0857200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044851.1); similar to Di-trans-poly-cis-decaprenylcistransferase [Anabaena variabilis ATCC 29413] (GB:YP_321433.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) -1.28154477183411 -11.5169348612278 2.55471109791544e-07 0.00119305008272651 11.4722683370002 17.4971489464018 -1.28154477183411 0.126892232401396 NA NA AT5G07440_at 5.8384414096946 5.62456889184130 6.66690873734943 6.57428526652445 6.29066924878458 5.95482836366565 4.30570759985532 4.11962464511545 3.00616888077877 3.42454416559093 6.01656901176054 6.45831627133561 5.94367335596614 6.40216258210719 6.42568053981705 5.76648455651885 6.23929225861093 5.12385927611227 3.79654012598196 0.246651281334512 0.245496950570307 0.245340889306096 0.251351594423206 0.243683594050126 0.242393080561097 0.252791236869610 0.247744841693656 0.278561037106871 0.254359219706464 0.244328651680094 0.241636048139136 0.241636048139136 0.241636048139136 0.243288121683899 0.241636048139136 0.255576089961355 0.253389786047079 0.254909773036377 5 5 + 2357269 2357962 2357668.818 2355938 2358195 + gene protein_coding_gene TRUE TRUE AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2) (GDH2) [Arabidopsis Thaliana] (GB:Q38946); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to glutamate dehydrogenase [Brassica napus] (GB:BAB62170.1); similar to Glutamate dehydrogenase A (GDH A) (GB:O04937); similar to NADH glutamate dehydrogenase [Vitis vinifera] (GB:CAC18730.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) 1.06646680574635 11.5140934970445 2.56093429654702e-07 0.00119570022305780 11.4709602899342 10.3999238315101 1.06646680574635 0.077727657312444 NA NA AT5G03240_at 10.8671970911430 10.8037662564274 11.9382183146162 11.8735909995323 12.2668316949162 11.8520393112318 10.4109177292054 10.0187873351136 9.16703393670567 8.98491403432408 10.9619607139295 10.6803550151713 10.9804530060178 10.9771524946665 10.8991841072017 10.8974685025414 11.1459777428495 11.0357985865854 8.53147609198103 0.13372014818392 0.131123995071118 0.131123995071118 0.132151325937912 0.138312563286821 0.138631252743690 0.133760552635015 0.131123995071118 0.151726993540750 0.164000733870231 0.133299106350727 0.133467525672835 0.131123995071118 0.134355621978474 0.133948269309948 0.131123995071118 0.139874136672911 0.137842852909544 0.168396330540352 5 5 - 772158 772857 772640.667 771724 773514 - gene protein_coding_gene TRUE TRUE AT5G03240.1|AT5G03240.2|AT5G03240.3 UBQ3 (POLYUBIQUITIN 3); protein binding encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.14083609859060 11.3649083672676 2.91203074487873e-07 0.00135933595170939 11.4014632110031 21.1748028209186 1.14083609859060 0.100015883817692 NA NA AT5G57630_at 9.85898533831777 10.0105168962714 10.2396548567126 10.2580886603479 11.2445668636161 10.8577795975758 8.0054871148889 7.8086250482668 5.88069512196450 5.91522169919154 7.55610887927279 7.72378674305524 8.26816596918902 8.43314138117314 6.98586469918089 7.75174707481924 8.40213158948796 8.2017746573761 5.58961915457933 0.209303082649342 0.208619342672846 0.208748020298830 0.206281155424028 0.222187562752158 0.209081391465639 0.204532770889946 0.208761149683776 0.213483052819004 0.224158825992576 0.205451772215561 0.2046016235034 0.202422947476625 0.212754000479522 0.223500843590529 0.209220608778256 0.215675939541318 0.202422947476625 0.224516621340143 5 5|0 -|/ 23358328 23359329 23358983.778 23358073 23360484 - gene protein_coding_gene TRUE TRUE AT5G57630.1 CIPK21 (CBL-INTERACTING PROTEIN KINASE 21); kinase CBL-interacting protein kinase similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to Os12g0132200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066079.1); similar to Os02g0178000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046073.1); similar to CBL-interacting protein kinase 24 [Populus trichocarpa] (GB:ABJ91230.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.05841982922165 11.3531117509028 2.94194782128824e-07 0.00137300704819522 11.3958986173844 16.6407224383860 1.05841982922165 0.0796165587347022 NA NA AT5G64530_at 3.36949863425196 3.52809248962676 6.63322191241758 7.21292313769921 5.26450252211751 5.5614619048006 4.51145413979843 4.33689304748601 2.54441175819629 3.73756096123161 5.46947942885633 4.82851137927202 5.20954360626857 5.90556911255164 3.70648392819416 4.52033756761427 5.24711203641523 4.76941785001992 2.82611548618455 0.251576284716282 0.250177200576885 0.270683432440235 0.273545102571094 0.253941827283570 0.258717400265884 0.254077424952691 0.252868479055156 0.271538654242012 0.258421947487714 0.252289768566481 0.251069108150338 0.254918334057429 0.259704683439112 0.254477330080781 0.253049648845422 0.253962623596394 0.254074981560978 0.256090103567678 5 5|0 +|/ 25812622 25813854 25813303.6 25812459 25814164 + gene protein_coding_gene TRUE TRUE AT5G64530.1 ANAC104/XND1 (Arabidopsis NAC domain containing protein 104); transcription factor similar to ANAC025 (Arabidopsis NAC domain containing protein 25), transcription factor [Arabidopsis thaliana] (TAIR:AT1G61110.1); similar to Os02g0555300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047122.1); similar to H0315A08.3 [Oryza sativa (indica cultivar-group)] (GB:CAH67573.1); similar to OSJNBa0006B20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAD40817.2); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.22526693373042 11.3141724603083 3.04309751928580e-07 0.00141990930249875 11.3774576605193 9.04879910628467 1.22526693373042 0.119878548260483 NA NA AT5G24380_at 5.71317908748881 5.69711482235073 5.51267413862732 5.57561085409804 6.34961150252337 6.72699049862066 6.54486681412988 6.9112907852526 4.80600799150004 5.66393824029997 4.58522102223795 4.40270465727913 5.4879079923571 5.22288437232091 3.52648544932571 5.72267736618943 6.48257723525721 5.1218227774265 4.82991365859077 0.253057582801450 0.249595972759035 0.24886249086106 0.259993762585085 0.25474021229508 0.259359373650313 0.250525410056793 0.250338353324607 0.256968794147702 0.24886249086106 0.262581052484164 0.255180816657446 0.255389526555429 0.253573357302189 0.275688416089563 0.248956110286573 0.252971347363008 0.262348867877258 0.24886249086106 5 5 + 8325935 8326503 8326276.091 8323898 8326708 + gene protein_coding_gene TRUE TRUE AT5G24380.1 YSL2 (YELLOW STRIPE LIKE 2); oligopeptide transporter closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1 similar to YSL3 (YELLOW STRIPE LIKE 3), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53550.1); similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABD04075.1); similar to putative YS1-like protein; VvYS1 [Vitis vinifera] (GB:AAT09976.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABB76763.1); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -1.09704849273909 -11.2701826966064 3.16193744024065e-07 0.00147504381587226 11.3564895713039 11.2134115158095 -1.09704849273909 0.0917190573800966 NA NA AT5G13140_at 5.06572430853559 5.51199257902086 1.40494438035765 1.55055454277185 2.66509242547224 2.98917939415917 2.78130205434509 3.18165772051786 5.03195937696161 5.03881005775688 7.46006090797568 8.93288599322424 5.29956804252106 6.42399414058148 9.18855391746654 6.33755371709357 3.31129855594758 6.70098053969677 6.23179391618291 0.252186562830685 0.255850582367276 0.268476482813933 0.261118684059218 0.249376823868183 0.259054447280663 0.243387788275135 0.245000918907380 0.269148400161998 0.248287650707774 0.246912940035258 0.245065823825179 0.248440103589714 0.24952702655997 0.249932168815196 0.250051830230002 0.257864561650877 0.246762818099989 0.24686723679033 5 5 - 4170714 4171187 4170985.636 4170563 4171797 - gene protein_coding_gene TRUE TRUE AT5G13140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26960.1); similar to Os09g0508200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063620.1); similar to Os12g0472800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066754.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96850.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) -1.22085832341373 -11.2419657175972 3.24081795776748e-07 0.00151151749550275 11.3429636281710 9.21433080587112 -1.22085832341373 0.120602428593304 NA NA AT5G44130_at 7.84673730625735 7.96727887910892 6.17504922928365 6.47297598072499 6.87573972083156 7.37791181407794 8.8724388314908 9.16923481221852 9.4356764190234 9.1505051026618 11.0064278404855 10.1387869340643 10.2500233114115 10.4381882857403 10.3717714473350 10.0083871047568 9.54718168854484 10.3938234835389 9.24562409105116 0.172355624164645 0.176090338687410 0.194194843850396 0.192844388018943 0.178797368841665 0.185416962774333 0.164396305692648 0.170655934912957 0.170974216465203 0.169949272090793 0.170447376174622 0.172940047929866 0.168954411233367 0.173868268131873 0.174514248211398 0.167760887307240 0.173188461336408 0.170241499006326 0.164298326903739 5 5 + 17778567 17779015 17778773.364 17778317 17779230 + gene protein_coding_gene TRUE TRUE AT5G44130.1 fasciclin-like arabinogalactan-protein, putative Identical to Fasciclin-like arabinogalactan protein 13 precursor (FLA13) [Arabidopsis Thaliana] (GB:Q9FFH6); similar to FLA9 (FLA9) [Arabidopsis thaliana] (TAIR:AT1G03870.1); similar to unknown [Brassica rapa] (GB:ABK78690.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -1.19038342901137 -11.1899034526645 3.39203277037320e-07 0.00158170488082502 11.3178500869823 17.3679669715309 -1.19038342901137 0.115254313259255 NA NA AT5G03555_at 6.21428860564876 6.82413642911712 6.18386233763604 7.14316104658872 6.34130887897605 6.16897493898926 8.63927388808151 9.00674839715469 8.3078758370512 8.49400589791502 8.24570144300266 8.28892620513859 8.76035627915895 8.07930502429686 7.94054434537284 8.80968875909102 8.082988871487 8.36625221836945 8.93917601254488 0.230068259795978 0.23121572661385 0.245616244005529 0.223572633960875 0.223089357705412 0.242413909549940 0.221456495109944 0.220828346291931 0.225892308207560 0.219733440481763 0.225127359049879 0.219185249220438 0.219877431106756 0.220380150098117 0.225309548203831 0.223276671118860 0.225558374825654 0.225773898423290 0.220848721116685 5 5 - 898371 898921 898697.091 898240 900158 - gene protein_coding_gene TRUE TRUE AT5G03555.1 permease, cytosine/purines, uracil, thiamine, allantoin family protein similar to cytosine/purines, uracil, thiamine, allantoin transporter [Alteromonas macleodii 'Deep ecotype'] (GB:ZP_01111046.1); similar to Os02g0666700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047676.1); contains InterPro domain Permease for cytosine/purines, uracil, thiamine, allantoin; (InterPro:IPR001248) -1.68577131269442 -11.1668851140866 3.4613205442496e-07 0.00161366763772916 11.3066811857954 15.5162558031457 -1.68577131269442 0.208880985280352 NA NA AT5G15640_at 5.83934956152366 5.6227793608447 6.90173923142375 7.08092607913731 7.15551722297145 6.88264644555012 4.59672002812221 4.45547291719096 3.84199372574970 3.37805881768007 5.67510089504527 5.46324624718735 5.36344153274893 5.89828347402638 5.61535808984393 5.28027079275977 5.70900384536488 5.6523045821764 3.32029304392629 0.212635364769264 0.211281229794182 0.227810904857550 0.222333844867337 0.219249703078153 0.235731312916619 0.217163572276983 0.218610656220005 0.231240709333536 0.219289791818951 0.223091843374804 0.213898809049999 0.222518244437665 0.211807783763503 0.218810315595602 0.218169741095837 0.216680205484943 0.218809635327507 0.225228921042868 5 5|0 +|/ 5088562 5089482 5088978.9 5087374 5090043 + gene protein_coding_gene TRUE TRUE AT5G15640.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96928.1); contains InterPro domain Retrovirus capsid, N-terminal core; (InterPro:IPR008919); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.00849420082556 11.0975200636762 3.67959066536275e-07 0.00171505720912558 11.2727793259631 10.6146812116019 1.00849420082556 0.0720663672698356 NA NA AT5G15630_at 0.957408674293382 1.26527329437328 3.15922519492389 3.50933617952647 2.40667978968719 2.36302645439007 1.73320499791729 1.46086765499487 1.04555420285783 1.48326607033182 1.96831340615856 2.37169555889065 2.11282093491674 2.22550778436491 2.36892109303707 2.06295668320596 4.91920843761024 1.84025545754735 1.87406916312647 0.250076878753953 0.24402159624242 0.258488595659652 0.265578994760289 0.250420331523807 0.260623641559234 0.248842536744298 0.244522736293232 0.261845129933142 0.255132234171254 0.244290104997668 0.248155722764944 0.24402159624242 0.24873366720294 0.246584926678697 0.250214322913858 0.266454571157641 0.247973627202912 0.24402159624242 5 5|0 +|/ 5085784 5086521 5086206.778 5084707 5086795 + gene protein_coding_gene TRUE TRUE AT5G15630.1 COBL4/IRX6 (COBRA-LIKE4); hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. Identical to COBRA-like protein 4 precursor (COBL4) [Arabidopsis Thaliana] (GB:Q9LFW3;GB:Q6ICX3); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 [Arabidopsis thaliana] (TAIR:AT3G29810.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96834.1); similar to brittle stalk-2 [Zea mays] (GB:ABJ99754.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13305.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cytokine, IL-1 related; (InterPro:IPR008996); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) 1.08507593273466 11.0646596202700 3.78817758910328e-07 0.00176529075652213 11.2565896749781 4.08254764579921 1.08507593273466 0.0937425417935114 NA NA AT5G12440_at 4.30998714567666 4.2578426482089 4.75861776158834 4.87767193864232 6.72943727523922 6.35259806543751 3.28882403229299 3.47993344651624 3.85580758094407 3.09326750114282 5.80205511719204 5.84935771561453 5.20777307950017 5.90347041056719 5.51195529907408 4.73792229945774 4.82214492149816 5.12842301406677 3.40753725826117 0.22578826974355 0.222970811081258 0.233771308697749 0.226553376785744 0.235738977729115 0.24799779965361 0.227007351562979 0.227627718315544 0.239242906658799 0.227837753795388 0.228008352458859 0.225418092943004 0.235266706951446 0.222970811081258 0.222970811081258 0.224785851169549 0.246421795589635 0.223907444355309 0.224872316711706 5 0|5 /|- 4035903 4036459 4036199.1 4035295 4038798 - gene protein_coding_gene TRUE TRUE AT5G12440.1 zinc finger (CCCH-type) family protein similar to RNA binding [Arabidopsis thaliana] (TAIR:AT3G21100.2); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14273.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.02005250313921 11.0591462302813 3.80673542820361e-07 0.00177355803600006 11.253865149588 9.16815996198562 1.02005250313921 0.0765018170280073 NA NA AT5G52570_at 3.53758136750943 3.32622187609804 3.81206319446538 4.46917825956768 3.61703821966602 3.98525937950225 7.49362645968669 7.14044836341197 7.24181372356185 6.50752598878299 7.84674733501966 8.75133888778749 7.03315057023156 7.59404447969826 8.28819562930184 8.6287346402672 6.1421938247998 7.18213049664133 6.93643030910543 0.285508021823542 0.281526795538455 0.283255936036231 0.278168168908282 0.274176149611095 0.298032321747912 0.280509819961028 0.270451126456442 0.280726897585736 0.270632497376872 0.276384423464777 0.272169810462436 0.269258317492540 0.277013371561725 0.269258317492540 0.27692871450343 0.277902101062438 0.282435638850087 0.275026969008402 5 5|0 -|/ 21352139 21353753 21352840.125 21352019 21354228 - gene protein_coding_gene TRUE TRUE AT5G52570.1 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); beta-carotene hydroxylase Converts β-carotene to zeaxanthin via cryptoxanthin. similar to BETA-OHASE 1 (BETA-HYDROXYLASE 1), beta-carotene hydroxylase [Arabidopsis thaliana] (TAIR:AT4G25700.1); similar to putative beta-carotene hydroxylase [Brassica rapa] (GB:AAS55552.1); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Carotene hydroxylase; (InterPro:IPR005596) -1.33573775880687 -11.0407931400929 3.86922673118982e-07 0.00180228581138822 11.2447786692051 11.961963968381 -1.33573775880687 0.148544485890596 NA NA AT5G46860_at 8.59835624356533 8.60283751996403 9.52473964021827 9.46128695800655 9.92323077790042 9.65699051432307 7.24675219880687 6.87503999569448 6.86045977607832 6.57885183617476 8.63576567606263 8.69394949135336 8.5898803269587 8.62309715408649 8.51535887371869 8.38057388832054 8.66976101611598 8.60467341139325 6.23820420224633 0.186352997066238 0.189228675322039 0.193417448281487 0.191966555099262 0.208399795654596 0.193603071416389 0.193467822772176 0.195518708638677 0.213451333062983 0.213012412501181 0.179556192943960 0.179556192943960 0.179556192943960 0.179556192943960 0.190420843303393 0.182026041917501 0.181964374434432 0.182417590512064 0.217777537361361 5 5|0 -|/ 19029572 19030421 19029880.7 19029248 19031231 - gene protein_coding_gene TRUE TRUE AT5G46860.1 VAM3 (syntaxin 22); t-SNARE Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Identical to Syntaxin-22 (AtSYP22) (AtVAM3) (SYP22) [Arabidopsis Thaliana] (GB:P93654); similar to SYP23 (syntaxin 23) [Arabidopsis thaliana] (TAIR:AT4G17730.2); similar to syntaxin-like protein [Solanum tuberosum] (GB:ABA46757.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 1.02821575130416 11.0188026349882 3.94557584184948e-07 0.00183745466954930 11.2338567591660 16.3103064400187 1.02821575130416 0.0798868322779547 NA NA AT5G37780_at 10.8871914291371 10.7973810651206 11.7127477157996 11.6310204247696 11.8506909964215 11.4754088069106 9.61750073330116 9.36946189413475 8.58802592982475 8.68818664469687 10.6240155060483 10.5376457101363 10.5249830265404 10.3522642244291 10.7653543752602 10.237254657367 10.3225172464649 10.3656288752919 8.57621535883511 0.106179531531653 0.103816921951435 0.103816921951435 0.105215984300255 0.105295285367402 0.11362044584936 0.106111395716126 0.108096802632252 0.131323750706815 0.122885700168820 0.103816921951435 0.103816921951435 0.108543023925430 0.108896459178490 0.105033570098545 0.105435898391698 0.107549134856021 0.106338548118295 0.123119888474793 5 5 - 15022055 15023322 15022428 15021757 15023435 - gene protein_coding_gene TRUE TRUE AT5G37780.1 CAM1 (CALMODULIN 1); calcium ion binding encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. Identical to Calmodulin-1/4 (CaM-1/4) (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.02900173359463 10.9986259039662 4.01706991380619e-07 0.00187034775186816 11.2238024112066 20.4595173484383 1.02900173359463 0.080634047448668 NA NA AT5G46580_at 7.34055480893405 7.7964141127242 7.44549074650347 7.25568663473862 7.85919083579697 7.30045597809119 7.7739007416661 8.14698321700322 7.83631300421707 8.1363388793761 7.00479713979071 7.74094461869664 7.42932480561007 7.43236067631577 7.97466724653068 7.8624130671984 7.5083293288896 7.28689585305992 7.79690123708324 0.204384174346286 0.191047792569031 0.200294926630049 0.203195452986583 0.193622290205001 0.202684761573338 0.202359360388003 0.189837024722427 0.195973267084905 0.185836173492390 0.193254937669216 0.191762495257307 0.190958230608128 0.202717519030914 0.185836173492390 0.185836173492390 0.197002540508625 0.195735167238263 0.186424108289638 5 5 - 18914741 18915143 18914960.273 18914672 18916872 - gene protein_coding_gene TRUE TRUE AT5G46580.1 pentatricopeptide (PPR) repeat-containing protein similar to chloroplastic RNA-binding protein P67, putative [Arabidopsis thaliana] (TAIR:AT4G16390.1); similar to putative chloroplastic RNA-binding protein, with alternative splicing isoforms [Oryza sativa (japonica cultivar-group)] (GB:AAS01974.1); similar to hypothetical protein MtrDRAFT_AC146791g19v2 [Medicago truncatula] (GB:ABE88021.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -1.30690930749502 -10.9805562906322 4.08229395271497e-07 0.00190030783498882 11.2147709416450 15.3414101172174 -1.30690930749502 0.144291530016164 NA NA AT5G46240_at 6.62653357674318 6.9145614271862 8.58677468797231 8.61221664508355 8.21379139160571 7.89541036109737 5.44910732530111 5.80566245983278 3.64700500731078 5.3387810384186 6.93525526103963 6.99709767450662 6.98859511570274 6.04753683017792 6.47123874779554 6.78700803833488 7.89511334753464 8.10107887294763 5.6958468011268 0.203670241782935 0.198734313764769 0.195753795880192 0.197044499775424 0.195753795880192 0.195846939813416 0.199231444930849 0.205732104463579 0.226573529322906 0.202649670333192 0.195753795880192 0.199705289684666 0.201360501805289 0.197587176552125 0.203155339436447 0.195753795880192 0.196838196268903 0.201291813897439 0.212423725045364 5 5 - 18760939 18761527 18761132.818 18760793 18763957 - gene protein_coding_gene TRUE TRUE AT5G46240.1 KAT1 (K+ ATPase 1); cyclic nucleotide binding / inward rectifier potassium channel potassium channel protein (KAT1) Identical to Potassium channel KAT1 (KAT1) [Arabidopsis Thaliana] (GB:Q39128;GB:Q42426); similar to KAT2 (K+ ATPase 2), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18290.1); similar to inward rectifying potassium channel [Brassica rapa subsp. pekinensis] (GB:AAX19659.1); similar to inward rectifying shaker-like K+ channel [Vitis vinifera] (GB:AAL09479.1); similar to inward rectifying potassium channel [Vitis vinifera] (GB:AAL24466.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 1.08560941120305 10.9503905604020 4.19375968135867e-07 0.00195177575570432 11.1996362957694 13.2238787851646 1.08560941120305 0.0966793976101821 NA NA AT5G60540_at 8.55322428871387 8.66603378517151 9.57176645303541 9.34667564868002 10.1283967835139 9.82675993545064 8.0568544373358 7.8572298348651 5.15137198460639 6.12501097748745 7.70623545503454 7.36510006237417 8.28658143119005 8.31220126960597 7.73296163610041 7.41640147374814 8.75447618714081 8.00094510983335 5.237153569321 0.169823430104042 0.154971635313623 0.157610470879366 0.155062001714302 0.164272165346447 0.155211723010159 0.167358259031763 0.160896720051488 0.176197429556137 0.159953004709743 0.160056483849599 0.158908763872514 0.160162212886801 0.159783072807406 0.162899891551486 0.159241022699995 0.169838935372783 0.163878920081036 0.166330226627835 5 0|5 /|- 24354105 24355127 24354553.111 24353849 24356028 - gene protein_coding_gene TRUE TRUE AT5G60540.1 ATPDX2/EMB2407/PDX2 (PYRIDOXINE BIOSYNTHESIS 2); glutaminase/ glutamyl-tRNA(Gln) amidotransferase/ protein heterodimerization Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex. Identical to Pyridoxal biosynthesis protein PDX2 (EC 2.6.-.-) (Probable glutamine amidotransferase) (AtPDX2) (Protein EMBRYO DEFECTIVE 2407) (PDX2) [Arabidopsis Thaliana] (GB:Q8LAD0;GB:Q56ZP9;GB:Q9FKJ3); similar to SNO glutamine amidotransferase; CobB/CobQ-like glutamine amidotransferase [Medicago truncatula] (GB:ABE80773.1); contains InterPro domain SNO glutamine amidotransferase; (InterPro:IPR002161) 1.00156784866225 10.8673987818869 4.51785836506874e-07 0.00210215949726649 11.1576248491960 15.7265551484791 1.00156784866225 0.076267179779977 NA NA AT5G61130_at 4.09619768901301 4.91351292762744 3.51554029668913 3.81891787111272 3.53166193004281 4.63867672214379 6.15255044611635 6.42394865425386 5.87363059409849 6.56253050406417 6.08867027555004 6.62231487037916 5.90580430595707 5.48098194534874 6.7801711496661 5.84199751330061 5.51101045410062 5.99913011864391 6.32864605256876 0.217090254024720 0.229227342049089 0.224316460171131 0.227930306161125 0.226650598349629 0.230483665709908 0.220936475612830 0.234723799660352 0.227885487210701 0.217090254024720 0.217090254024720 0.22121018168086 0.220932986369056 0.229643735585465 0.223163813331875 0.217090254024720 0.226911466276105 0.218842989715297 0.22353020841255 5 5|0 -|/ 24604679 24606040 24605059.111 24604439 24606806 - gene protein_coding_gene TRUE TRUE AT5G61130.1 glycosyl hydrolase family protein 17 Identical to Glucan endo-1,3-beta-glucosidase-like protein 2 precursor [Arabidopsis Thaliana] (GB:Q9FNQ2); similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT5G08000.1); similar to putative glycosyl hydrolase family 17 protein [Medicago truncatula] (GB:ABE90942.1); contains InterPro domain X8; (InterPro:IPR012946) -1.84594099375274 -10.7278439896754 5.12591199868462e-07 0.00238457426178809 11.0857276836248 10.7782237151393 -1.84594099375274 0.248330782773111 NA NA AT5G50335_at 4.1342559343773 4.25885732334265 1.62587810855691 1.99738495871531 3.08845156373526 3.33774596639003 2.34337945077927 2.35309653609196 2.27690960721141 2.23204962818909 8.38456772384885 8.05533137841342 6.7651861066533 7.47650488087283 8.38875737156864 7.76406462366446 5.87431463317461 7.414538086716 5.15553666295644 0.385021931238336 0.385021931238336 0.410491452470062 0.398875532746706 0.385021931238336 0.387876790744235 0.387266676238607 0.395283662523876 0.413074563051739 0.393069164938430 0.391213948767404 0.393255311044404 0.390589192398926 0.385021931238336 0.400721408338959 0.394749180161788 0.385021931238336 0.392146784470391 0.385021931238336 5 5 - 20506665 20506770 20506695.273 20506320 20506953 - gene protein_coding_gene TRUE TRUE AT5G50335.1 unknown protein 0.995024235326555 10.6445455396333 5.53085069414474e-07 0.00257239865784672 11.0420504414918 8.26083459694841 0.995024235326555 0.0803884954661223 NA NA AT5G59670_at 8.94091398429693 8.95495428025827 8.9225077487561 9.07842282668504 7.49916793966355 6.76447836796772 7.39718814348156 6.96872448354646 7.96874739097656 5.7482453358283 5.26251317884569 6.95477388804004 5.51693263238505 6.9056433688453 4.65769837010513 6.60757671599413 6.37610373502959 6.6889661725047 6.31481843019046 0.242579859124281 0.244670290106989 0.239255653800078 0.239255653800078 0.242893292654923 0.266258631918869 0.239255653800078 0.240464165256159 0.25531890274344 0.249627878461611 0.245429816776956 0.239255653800078 0.252331783172194 0.250353398167094 0.260731021238393 0.239255653800078 0.246749612763361 0.246152064717238 0.240996982141147 5 5 + 24062079 24062662 24062383.364 24058720 24062878 + gene protein_coding_gene TRUE TRUE AT5G59670.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59680.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90328.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.29168566652842 -10.6312861544836 5.59845601320204e-07 0.00260328204613895 11.0350445722632 14.4650679185239 -1.29168566652842 0.149655419621820 NA NA AT5G55560_at 4.74050080800884 4.91239918259658 7.08151349572831 7.17089290163192 6.16393930867323 6.37190039168607 3.10942910891721 3.23663327562313 1.92433264948220 2.46293490482890 2.47190587574301 2.57241868526628 3.08614424137109 2.76999169366988 2.15799701828686 2.93942667705911 3.63989362647583 2.70319013850266 2.25750781428703 0.235836429505019 0.225038295713718 0.229666508209172 0.223723077774261 0.223904671246856 0.236814683308084 0.221346023529351 0.233072275864417 0.242663058292621 0.225442415243415 0.223045126063844 0.224840803381214 0.227491538821289 0.223077753139224 0.230672094783016 0.222239182877510 0.236418150669927 0.231390996548996 0.225469049749656 5 5|0 -|/ 22523774 22524329 22524047.2 22523528 22525105 - gene protein_coding_gene TRUE TRUE AT5G55560.1 protein kinase family protein similar to WNK3 (Arabidopsis WNK kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT3G48260.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81462.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.913093719997151 10.6196583898496 5.65848150166286e-07 0.00263062805012306 11.0288886641718 7.8521741178146 0.913093719997151 0.0538882446209885 NA NA AT5G17170_at 10.2998515009591 10.4394163174769 10.6327404087404 10.6071745684753 9.39465153098227 8.89549083255561 11.6190328569510 11.6959344826392 9.84706451299138 10.6490752106385 10.8315437988178 10.6975337122671 10.0381197209584 10.3354372615672 10.8921914941689 10.2700668849178 10.293538288153 11.0931999996606 10.1400905166161 0.104843412940694 0.105058815686643 0.107226591934150 0.105988748717547 0.105756281016763 0.115778530869552 0.107930571660717 0.105670337905044 0.112983753881861 0.109316687964487 0.106180243646178 0.104273162807795 0.113308512272518 0.107290552814724 0.107509701978406 0.104273162807795 0.115111743695763 0.106763079522641 0.115414629044916 5 5|0 +|/ 5649743 5650950 5650508 5649195 5651160 + gene protein_coding_gene TRUE TRUE AT5G17170.1|AT5G17170.2 rubredoxin family protein similar to rubredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G51010.1); similar to Os08g0162600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061060.1); similar to PREDICTED P0577B11.138 gene product [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53651.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Rubredoxin-type Fe(Cys)4 protein; (InterPro:IPR004039)|similar to binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G55480.1); similar to Os08g0162600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061060.1); similar to PREDICTED P0577B11.138 gene product [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53651.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478) -1.02231628066257 -10.5383505710589 6.09827136415043e-07 0.00283447653005712 10.9855241051131 20.8323018832537 -1.02231628066257 0.0907848152696666 NA NA AT5G01015_at 4.03890863277949 4.74724542739366 1.82897472201451 1.89643456651700 2.44268699716817 2.54726653520435 4.63885047035773 5.08001781047401 6.90780854165475 6.4151574184922 9.9923580908818 9.9533325300703 8.02732166452794 9.15918809435727 9.8797857416281 9.33062708643607 5.3242008411577 8.60071541664306 7.25694387608271 0.353064188003552 0.347788370577677 0.387779931228988 0.384543581917559 0.355929197801161 0.372616551399099 0.343807248773651 0.351854385478649 0.351125578951345 0.347462279553053 0.362620102054504 0.364891783848371 0.347893986512141 0.360588209983024 0.367326353611806 0.353667472002352 0.367092042331848 0.348560921549913 0.347344740510351 5 5 - 5336 5721 5468.636 5255 5890 - gene protein_coding_gene TRUE TRUE AT5G01015.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65295.1); similar to Os11g0463700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067867.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28368.1) -1.25638907026612 -10.4865523631980 6.39772857287001e-07 0.00297302446781270 10.9576045211770 11.2242537095499 -1.25638907026612 0.146009056246803 NA NA AT5G46230_at 6.76367116624603 7.15706290567061 8.73832574333472 8.92690154144225 6.34472909689226 6.67633331903099 3.33705203459912 3.56359796000568 3.15443185213909 2.35663690102748 4.60922794438910 3.77363034707702 3.3255915664629 4.41506502846704 3.75385261461026 3.76566942097896 4.05654870639041 4.66570768801354 2.19515087351337 0.246639617195945 0.250861504939350 0.249601478000113 0.238109438257958 0.246219987746529 0.254881750556589 0.242724331943959 0.251295853567182 0.252676811360186 0.247711052319564 0.238109438257958 0.254879211525946 0.240937044368781 0.242446831809028 0.246635518498077 0.238109438257958 0.254511252394421 0.242825796123102 0.257870228618964 5 5 - 18759850 18760126 18759978.818 18759667 18760272 - gene protein_coding_gene TRUE TRUE AT5G46230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09310.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC10818.1); similar to Os07g0119800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058773.1); similar to Os01g0210600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042369.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.06206256337105 10.4771883434520 6.45354985632317e-07 0.00299831926324775 10.9525326507249 9.74565999095702 1.06206256337105 0.102614602478845 NA NA AT5G26040_at 4.83722941040726 4.78730640212592 6.39434452933611 6.36703734126871 7.74889400212981 6.60059100100623 3.82837400151283 3.83819017281997 3.13433827776295 2.73230749162363 5.47506548915627 4.70755747439115 5.44732239956239 5.70301413996476 5.15504905894708 4.85572472653144 5.8794580377033 4.72307820910641 2.68180634397320 0.258071850142378 0.258164411332443 0.273484253127408 0.259521661440758 0.287929524454069 0.277322323880053 0.256125607851662 0.257877214276991 0.265226149099520 0.276976476937069 0.256125607851662 0.262037729578673 0.257540555249983 0.27338444286319 0.258429262840606 0.259878023265333 0.265550865068671 0.256415710267628 0.282763943435611 5 0|5 /|- 9100533 9101181 9100778.333 9099160 9101639 - gene protein_coding_gene TRUE TRUE AT5G26040.1|AT5G26040.2 HDA2 (histone deacetylase 2); histone deacetylase Class III RPD3 type protein similar to HDA9 (histone deacetylase 9), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G44680.1); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286)|similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 1.52637179320271 10.4680314447918 6.5086484371073e-07 0.00302326719903634 10.9475656485418 9.59662972242933 1.52637179320271 0.198970282028893 NA NA AT5G46730_at 5.39740328695058 5.0845410782356 5.85698675493073 5.44460063587162 5.19833514500639 5.30180167830127 5.51879017534986 5.57869996394428 6.76007780700251 6.31709258009279 6.56619906429252 6.52134072892224 6.11169993353056 6.54186677986497 6.9411391225664 6.01815212194957 5.84269878000639 6.569926602195 6.21665529708321 0.198754087547177 0.207069384556666 0.200176352869275 0.201892995697579 0.203870938604117 0.209899346995745 0.205858869030953 0.201234357866294 0.202001505013261 0.208504694349362 0.198754087547177 0.204336204797434 0.200945547803609 0.204083897468790 0.207667778566769 0.204659883451337 0.205551504234777 0.19980191291142 0.200924093735155 5 5 + 18981476 18981932 18981698.636 18981239 18982295 + gene protein_coding_gene TRUE TRUE AT5G46730.1 glycine-rich protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to Eggshell protein [Medicago truncatula] (GB:ABE79200.1); contains InterPro domain Eggshell protein; (InterPro:IPR002952) -1.01605437889095 -10.4297747600182 6.74443553238168e-07 0.00313211586123805 10.9267354572585 11.8328463996865 -1.01605437889095 0.0919374102061016 NA NA AT5G67070_at 7.81409706889626 8.44984706563661 3.83890906716836 3.66616003702077 5.56301568295683 6.68191450540189 8.19452212116824 9.3219381261689 8.11282669329486 8.92804227676631 10.5306326788692 10.9570716649362 9.47396820974519 9.85318205838 10.8019701391253 9.5744572903172 7.91166187723275 10.2261264454660 9.14088691421257 0.236072828485299 0.232910479549689 0.323804707650271 0.288499989783974 0.264732947531691 0.259231966743382 0.229011918427541 0.235064285621649 0.279763992796562 0.233829323286203 0.232066314531278 0.240609348001579 0.232759692881355 0.238867211513002 0.244353481907788 0.22999169968234 0.254981987158586 0.229011918427541 0.233265224785745 5 5 + 26785388 26785709 26785562.091 26785246 26786072 + gene protein_coding_gene TRUE TRUE AT5G67070.1 RALFL34 (RALF-LIKE 34) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. similar to RALFL23 (RALF-LIKE 23) [Arabidopsis thaliana] (TAIR:AT3G16570.1); similar to Rapid ALkalinization Factor [Medicago truncatula] (GB:ABE93558.1); contains InterPro domain Rapid ALkalinization Factor; (InterPro:IPR008801) -2.07528714911462 -10.4059970061909 6.89564994910052e-07 0.00320165027136737 10.9137247085893 16.012993337769 -2.07528714911462 0.297584676557523 NA NA AT5G06690_at 8.84915603322854 8.69957872953527 9.14042656411755 8.93811321161258 9.8282260307056 9.50895957213715 7.04446698461003 6.73626362171877 6.83519593207715 6.96877469519652 9.53173858020628 8.8843483335617 9.19386364382246 9.36451844776598 9.20941335787506 8.82871999653747 9.1455323258544 8.67167092745297 6.88448876664609 0.145124370478666 0.143118464551933 0.148946045288472 0.140852594487630 0.147806308767218 0.155187135960789 0.145293852558006 0.164541696385559 0.157380412695435 0.154286513375915 0.148814303292199 0.148282155618640 0.145672792630364 0.146596308100985 0.144847711224517 0.144109267748748 0.149088212402309 0.142651348024594 0.150049745843701 5 5|0 -|/ 2060993 2061854 2061652.333 2060504 2061957 - gene protein_coding_gene TRUE TRUE AT5G06690.1|AT5G06690.2 (THIOREDOXIN-LIKE 5); thiol-disulfide exchange intermediate Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335)|Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.994740253845553 10.3477711705334 7.28171511356973e-07 0.00338017215571907 10.8816555465128 16.5930882599287 0.994740253845553 0.0882789898491215 NA NA AT5G24280_at 1.92486750047041 1.31295622129732 3.22495771606095 3.36371230347355 3.2347468865353 3.46385999538226 1.75056023834916 1.42568077468045 1.66080471194105 2.10623515811555 3.17134371462334 2.66406156255106 2.92292223965556 2.99852313881697 2.80006751113336 3.41592319903173 3.54982201161761 3.05059530385199 2.01149763193488 0.229040157820800 0.227869371184963 0.228351231024184 0.228710178361094 0.221867239312546 0.222185459752663 0.225985791441865 0.226354868798383 0.244479209599757 0.227820952256516 0.221007396829114 0.221077084003769 0.229661552299062 0.229557941806078 0.227196587680181 0.219410475983001 0.224156413731580 0.219035318971444 0.226746066780698 5 5|0 -|/ 8251442 8252174 8251889.6 8251381 8261431 - gene protein_coding_gene TRUE TRUE AT5G24280.1 ATP binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49250.1); similar to unnamed protein product; emb|CAB66404.1 gene_id:MOP9.10 similar to unknown protein-related [Medicago truncatula] (GB:ABE86966.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 1.15796839051085 10.3400700760020 7.33451058133247e-07 0.0034039463607964 10.8773916491844 4.96158595577653 1.15796839051085 0.128542195914947 NA NA AT5G23020_at 7.21148262117543 7.76241704368285 4.33557558870323 4.71139149349373 8.23959751253482 7.40795510170154 4.40523814649009 4.73415557822735 2.65391234857345 7.4353173182914 3.86675481804194 2.41447814737001 4.50139107714281 5.63993574037399 1.96692466916786 2.59098370619539 5.20032874777049 5.0017528875801 5.11203592023704 0.295224829986839 0.298493569921467 0.298491981570587 0.292875862195631 0.297998018858192 0.293871043252293 0.295273112571263 0.293546021961044 0.302954759269874 0.298263173543706 0.293192483485592 0.311510270702684 0.292875862195631 0.292875862195631 0.306505987885339 0.31014163407533 0.294137573809704 0.297783410329677 0.297673729400741 5 0|5 /|+ 7720566 7721613 7721246.875 7718124 7721842 + gene protein_coding_gene TRUE TRUE AT5G23020.1 MAM-L (METHYLTHIOALKYMALATE SYNTHASE-LIKE); 2-isopropylmalate synthase methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). similar to MAM1 (2-isopropylmalate synthase 3), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT5G23010.1); similar to methylthioalkylmalate synthase a [Boechera divaricarpa] (GB:CAJ55512.1); similar to methylthioalkylmalate synthase c [Boechera divaricarpa] (GB:CAJ55514.1); similar to methylthioalkylmalate synthase b [Boechera divaricarpa] (GB:CAJ55513.1); contains InterPro domain Pyruvate carboxyltransferase; (InterPro:IPR000891); contains InterPro domain Alpha-isopropylmalate/homocitrate synthase; (InterPro:IPR002034) -1.47446398595841 -10.3269594325493 7.42535048918556e-07 0.0034453626269821 10.8701205557454 10.5834302623708 -1.47446398595841 0.193061237106279 NA NA AT5G12080_at 2.75251203423401 3.40362498707277 3.26148924470956 3.66721614971743 3.5643065065916 3.546934064977 5.34028237517778 5.24757317584317 3.87994944120763 4.67957495178405 4.09145159134417 4.71376758881042 4.30548940963511 4.22879491510198 4.64718432694464 3.93775653723402 4.11501260273485 4.408310537147 4.80001044081888 0.231320411545834 0.225290192952850 0.230210929492838 0.245643489169613 0.233881342152882 0.230080021396890 0.238158398380952 0.227259901018511 0.236983279811546 0.228807913372653 0.231118148653281 0.224715189508879 0.228853957941543 0.230838323391383 0.229930745744962 0.224715189508879 0.253984921709219 0.236374961554848 0.233940148069045 5 5|0 -|/ 3898226 3898922 3898566.5 3898048 3901630 - gene protein_coding_gene TRUE TRUE AT5G12080.1|AT5G12080.2 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19520.1); similar to unknown [Zea mays] (GB:AAT08021.1); similar to putative protein T30F21.6 [Sorghum bicolor] (GB:AAL68849.1); similar to unknown [Zea mays] (GB:AAT08012.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain MscS Mechanosensitive ion channel; (InterPro:IPR006685) -1.17983609913527 -10.3243805935677 7.44336193512937e-07 0.00345297560170652 10.8686885532005 8.22756692556835 -1.17983609913527 0.133763441263487 NA NA AT5G14940_at 8.46104936010727 9.20077895214395 10.4406553296486 10.4418129298335 10.4969018999507 10.1194960822387 8.80273502977571 8.88445801459866 6.00556405046743 6.68771959207905 8.43003444965884 8.08864615427455 8.65340647432832 8.43276672116881 8.05667771075602 8.39291765774768 8.84277953940314 8.41485523302809 4.61423802193454 0.187299677399167 0.174464693537484 0.178968803257065 0.180158543151119 0.176382742581689 0.181362263430462 0.175756997922029 0.178508252867969 0.222087178767092 0.192615090211593 0.175925409173050 0.175412586903707 0.174464693537484 0.187941209482767 0.182632872838444 0.179005942388852 0.189297701266816 0.181054610214991 0.204927122082363 5 5 - 4831835 4832323 4832107.909 4831751 4834398 - gene protein_coding_gene TRUE TRUE AT5G14940.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G01350.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE79897.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.22914588850217 10.3226303263332 7.45561339569708e-07 0.00345791349292431 10.8677163119952 16.6975781401402 1.22914588850217 0.144406314956513 NA NA AT5G47070_at 8.5099640139111 8.46931429062973 9.91202956508257 9.92660413117845 9.5459673272135 9.26072771248245 6.1888374057176 6.32414248713141 8.25573620688814 6.47361444685537 8.45048518170418 8.29668701984693 7.83678023474516 8.72591050250963 8.08557129992224 8.42383428237618 8.3082782454439 8.71352260971471 6.46546968615253 0.156421074128078 0.150740427397906 0.152947781746408 0.152125457473072 0.150175738234621 0.150175738234621 0.179101198200331 0.159884936101185 0.157171157337787 0.170308787916217 0.155135549218823 0.151681694533562 0.159565353330609 0.156624381163567 0.158093504482978 0.150175738234621 0.152240848979164 0.156139888271583 0.172186670134847 5 5|0 -|/ 19135991 19136501 19136254.1 19135770 19138136 - gene protein_coding_gene TRUE TRUE AT5G47070.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G17660.1); similar to protein kinase, putative [Brassica oleracea] (GB:ABD65030.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.890361452246332 10.3192452711821 7.47937017147313e-07 0.00346818394851209 10.8658352051035 16.2272352593341 0.890361452246332 0.0551428091449607 NA NA AT5G11430_at 4.82779176109186 4.65296598542435 4.86470117140436 4.93434509423518 4.6851332388061 4.83684519531339 4.60376434704946 4.8338021343867 5.72818819609791 5.334080321128 5.58852602499164 5.4663751310563 5.41453586180731 5.57568490082 4.78307648545135 5.28340896151524 5.19978325169654 5.03734078678674 4.88739327244641 0.208618514715268 0.181476023034854 0.18992586067137 0.189239097150304 0.182981308538421 0.183879525906013 0.189634443573228 0.187138862584442 0.192706883831621 0.191468237102762 0.188608150574457 0.184836504857686 0.182118617555375 0.181600527467778 0.195150577241262 0.184569087612961 0.183032546525365 0.185851735280126 0.185622867085286 5 5 + 3651681 3652211 3651940 3648476 3652405 + gene protein_coding_gene TRUE TRUE AT5G11430.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G25520.2); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921) -0.894258213406114 -10.2879167993837 7.70318039698705e-07 0.00357119443204320 10.8483773319258 10.0849912936671 -0.894258213406114 0.0577464067135155 NA NA AT5G07620_at 2.27610012185094 2.20379054487624 2.0830407050152 1.88701711192591 3.62804614534836 3.31650969526017 2.13677776624364 1.76360860363986 0.819599889881998 0.656616569910861 2.95706123933193 2.34288421016729 2.56672655971225 2.78665360763661 2.1158677051463 2.11478628425171 1.26838646120100 2.39695969793804 0.438118493836122 0.206196890751264 0.197756511142479 0.204709841161756 0.202232165284444 0.211152713716956 0.208953933259529 0.204235329477728 0.199474526123222 0.202970388558740 0.21516497996223 0.197604590426379 0.197604590426379 0.201096217268119 0.202091357597296 0.199619901401964 0.200009692275781 0.202117141790495 0.208997352684803 0.209158309160837 5 5 - 2407444 2407900 2407679.636 2407402 2409067 - gene protein_coding_gene TRUE TRUE AT5G07620.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61570.2); similar to protein kinase [Capsella rubella] (GB:AAR15469.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.996862376261774 10.2466861657148 8.00888570252734e-07 0.00371211852312142 10.8252678456601 3.89025002271144 0.996862376261774 0.0915660513766796 NA NA AT5G52280_at 3.86043943817014 4.08590011216611 3.72721721731723 3.54617248790654 4.43031987742104 4.28851569679053 4.94756896441039 4.95389581788150 5.49189420502687 5.69525245644866 7.18830849384914 7.21166923599003 6.07170299504586 6.4353911509003 6.48054965122138 5.637451483635 4.90782206510213 6.2373070073571 5.89704410623874 0.237537282459361 0.231783153757206 0.247088572619412 0.246031935923376 0.231862127310917 0.244881971159114 0.229375731714818 0.228875966387653 0.229871218737244 0.230621679719690 0.229661780817034 0.229965563628348 0.228524389257380 0.2335539567747 0.230803773959005 0.230180188010068 0.238029153523632 0.233050534953170 0.232031767198787 5 5|0 +|/ 21246650 21247296 21246921.7 21244059 21247473 + gene protein_coding_gene TRUE TRUE AT5G52280.1 protein transport protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63300.1); similar to putative myosin [Oryza sativa (japonica cultivar-group)] (GB:AAO72668.1); similar to Os10g0504600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065004.1); contains InterPro domain t-snare; (InterPro:IPR010989) -0.884865518142592 -10.2382463151511 8.07307332639012e-07 0.00374106217944918 10.8205185543349 10.2130064596541 -0.884865518142592 0.0557435274942364 NA NA AT5G57800_at 8.97741549236621 9.16006161491427 10.7252633214167 10.8450998761887 11.5820428128403 11.4235176567024 10.1550903377825 10.0266771643202 9.9784628439843 9.80652875214927 12.0177529079560 11.0180083571001 11.4280793989005 11.5150596771064 10.8300894746058 11.0166750876330 10.8941887572956 11.2034248821294 9.65046086255844 0.120176279091326 0.112661982046769 0.116256852201359 0.113497771241600 0.117479677589622 0.121278106217019 0.112580759747464 0.115486431787288 0.120215524412844 0.120760964071398 0.117763388010789 0.117088539232598 0.112580759747464 0.117401886666755 0.112791433688619 0.115973730603916 0.129410811366031 0.118732383893515 0.118453378166735 5 5|0 +|/ 23440255 23441029 23440638.7 23437435 23441278 + gene protein_coding_gene TRUE TRUE AT5G57800.1 WAX2; catalytic encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. similar to CER1 (ECERIFERUM 1) [Arabidopsis thaliana] (TAIR:AT1G02205.2); similar to lipid transfer protein (GB:AAA33934.1); similar to glossy1 protein [Zea mays] (GB:AAR90847.1); similar to Gl1 protein [Zea mays] (GB:AAR97643.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Sterol desaturase; (InterPro:IPR006088); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.869795826016888 10.1756785360067 8.56670830995764e-07 0.00396895596000338 10.7851095461504 20.8880096866022 0.869795826016888 0.0517258549543107 NA NA AT5G66320_at 5.86414951209258 5.94943786279547 6.7622322745188 7.29079261931309 6.76125142054579 7.04218002439072 3.18624916530518 3.582073580692 3.71764568430813 3.26882976292002 5.25220677314023 6.27095794286428 4.97124526625610 5.5172976785493 5.56676712097437 5.21827719833104 5.11728406352343 4.22417712105531 3.3959872861292 0.255242068132553 0.247312811019881 0.260314946932023 0.247062676344324 0.246477215961402 0.258292880338710 0.247997037079026 0.244170427594496 0.250551600953557 0.247016928481253 0.242934573270993 0.245434069873628 0.249606678943643 0.248709362613725 0.245990958201652 0.243543884750489 0.257365404345139 0.248730906634326 0.251706919553836 5 5 - 26513454 26513996 26513730.273 26513181 26515075 - gene protein_coding_gene TRUE TRUE AT5G66320.1|AT5G66320.2 zinc finger (GATA type) family protein Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. Identical to GATA transcription factor 14 [Arabidopsis Thaliana] (GB:Q9FH57); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G51080.1); similar to hypothetical protein [Thellun (GB:ABB45844.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 1.12409513883240 10.1738874334589 8.5813135204482e-07 0.00397486442267161 10.7840906758195 10.1688445858096 1.12409513883240 0.125060942175314 NA NA AT5G03170_at 2.19063515237985 2.18587419679134 4.26365328918458 4.26203246160641 3.37948693296734 3.53695679291208 2.76272176296206 2.52597015064111 3.29250964854225 2.79000842238618 4.11572732321619 4.54128278430809 4.2251298508468 3.87671061919775 5.26115176022959 4.34408644021558 6.5824495616244 4.27811415479342 3.40333970128762 0.256205819216835 0.245050349513684 0.243535963131721 0.245192313739394 0.241369367616927 0.251685702397827 0.242923070448504 0.244583127185823 0.24865795769056 0.253440502620735 0.251262862660525 0.245633131251407 0.245313176692228 0.244271506033332 0.251422849077465 0.245559817942379 0.257343898146721 0.241595099848118 0.250215516391325 5 5 - 753011 753452 753249 752749 753656 - gene protein_coding_gene TRUE TRUE AT5G03170.1 FLA11 (fasciclin-like arabinogalactan-protein 11) Identical to Fasciclin-like arabinogalactan protein 11 precursor (FLA11) [Arabidopsis Thaliana] (GB:Q8LEJ6;GB:Q9LYW8); similar to FLA12 (fasciclin-like arabinogalactan-protein 12) [Arabidopsis thaliana] (TAIR:AT5G60490.1); similar to fasciclin-like AGP 13 [Populus alba x Populus tremula] (GB:AAT37956.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 0.863575847414309 10.1698464956457 8.61436399668382e-07 0.00398931196686428 10.7817909108022 7.04593341870193 0.863575847414309 0.0492137088645606 NA NA AT5G23660_at 8.50670596522994 8.80559662080488 9.86177907016534 9.56709969126786 10.1315390294118 9.59703248288594 3.93824640696829 3.99850660774579 2.5666607173508 2.60110251849429 2.35614151915395 2.96929819620556 3.96064068553782 3.31972862292314 3.00491104751657 3.60698407690554 4.75020824723267 2.54904222592188 2.75285105975272 0.366836010266070 0.37120534124756 0.367514204106103 0.376401278569965 0.377486241635568 0.366042644679923 0.341309861572397 0.343566743785449 0.341371107595358 0.342485688187587 0.347484904929828 0.335520295889046 0.343528919322484 0.33513863302126 0.338478151009697 0.335832588993792 0.34379400681101 0.33513863302126 0.339325857309703 5 5|0 -|/ 7972010 7973198 7972571 7971654 7973928 - gene protein_coding_gene TRUE TRUE AT5G23660.1 MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) homolog of the Medicago nodulin MTN3 similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G48740.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); similar to Os11g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067955.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 1.09072840751963 10.1423918527959 8.84260586767364e-07 0.00409412651673289 10.7661265374251 11.0282252807469 1.09072840751963 0.118070988034856 NA NA AT5G09760_at 6.8340066500148 7.22657138167659 6.73909795356797 6.99759405654807 6.24281221378487 6.65563415079783 8.72859670885057 9.1945937017771 8.15518782085605 8.83220248869265 9.7096725140043 10.0371660100041 9.11858752308403 9.3347182491199 9.3233679998525 9.45850332614358 8.88364712688597 9.5771237764007 8.9256544262314 0.197861468071801 0.192361655758136 0.193483411225986 0.186864846788272 0.194000635562846 0.199823987508484 0.196402322738804 0.190965601759564 0.207005635078474 0.187361173836811 0.184169051192374 0.188287282802552 0.183316081001245 0.188089001960504 0.187088064948592 0.187890103518691 0.194517457146595 0.186624035002336 0.187284464121148 5 5 + 3033832 3034339 3034112.182 3032376 3034544 + gene protein_coding_gene TRUE TRUE AT5G09760.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G64640.1); similar to 52O08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67549.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -1.16030929541837 -10.1052496277593 9.16189646449137e-07 0.00424104187341306 10.7448248760136 16.3613782992674 -1.16030929541837 0.134994002647527 NA NA AT5G47180_at 6.88364734788348 6.99057254883378 8.38271158533857 8.54883107894103 8.93920857520468 8.63493178035286 5.63540976750928 5.69352937099053 5.40834286239798 5.00268526569944 6.54437229742373 5.70733340991479 7.1948669349327 6.6620121768258 6.93159193247077 6.1833966298132 7.06172406794683 6.54745082436212 4.74625664558708 0.237576000588195 0.237576000588195 0.239501439057323 0.242731013504188 0.239809382903559 0.242950800701065 0.238116476180917 0.237576000588195 0.248016300220025 0.239227068270413 0.237576000588195 0.237576000588195 0.237576000588195 0.242060099882802 0.237576000588195 0.240183982556441 0.247813067125097 0.237830896128959 0.239280636482737 5 5|0 -|/ 19178642 19179838 19179397.375 19178371 19181024 - gene protein_coding_gene TRUE TRUE AT5G47180.1|AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1), protein binding [Arabidopsis thaliana] (TAIR:AT3G60600.1); similar to vesicle-associated membrane protein, putative [Brassica oleracea] (GB:ABD65040.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) 0.893758766745466 10.1047393985599 9.16636884421245e-07 0.00424219550110152 10.7445313672125 13.2918661529348 0.893758766745466 0.0635822101710778 NA NA AT5G52870_at 3.04529930165431 3.48624190729825 5.18521699745665 5.88958546430407 4.8508436880013 5.18214875635549 2.67066311476329 2.78730262814218 2.33378505893152 2.43497379598569 3.55226899005788 4.01267642733354 3.79191937006980 3.466649241072 4.5941585376978 4.09355792867286 4.61995955949788 3.86225130685608 2.58404107671605 0.218648061790957 0.209465377793434 0.215184649889552 0.211145663720136 0.215587896793314 0.213953922054829 0.214570700689912 0.213305698235265 0.217041929691852 0.226975814394815 0.214442709201358 0.214531823044580 0.209009204532665 0.218130115767069 0.217031806989967 0.211841661223091 0.229228481031725 0.213235600684210 0.210584307331543 5 5 - 21445614 21446178 21445891.273 21445173 21446671 - gene protein_coding_gene TRUE TRUE AT5G52870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64080.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83069.1) 1.25782258097505 10.0998221494333 9.20959235947872e-07 0.0042612783847308 10.7417014934884 7.36221947259776 1.25782258097505 0.156126877691155 NA NA AT5G02610_at 7.65020957466085 7.7161664558421 7.89508257205118 7.8798559662666 8.16771245469754 7.88198210752117 8.01840990960674 8.25348088680237 7.97590681260848 7.85616796321506 8.03076370633253 8.06031464739237 7.81937087714283 7.78116950865398 8.14959914512637 7.59668943982727 7.80717858902365 8.03904549047546 7.8140692574696 0.116888228137199 0.114500211616060 0.116013268281419 0.119358442796407 0.112369258587673 0.118813545382191 0.11945465557395 0.121806545858316 0.115733457801508 0.113297152969559 0.118734182803695 0.116095936077894 0.116067733358162 0.112613904843863 0.119559139561655 0.116948611117534 0.126388787047329 0.115330438121211 0.113613715204415 5 5|0 +|/ 587756 588504 588182.625 587523 588731 + gene protein_coding_gene TRUE TRUE AT5G02610.1 60S ribosomal protein L35 (RPL35D) Identical to 60S ribosomal protein L35-4 (RPL35D) [Arabidopsis Thaliana] (GB:Q9LZ41); similar to 60S ribosomal protein L35 (RPL35B) [Arabidopsis thaliana] (TAIR:AT2G39390.1); similar to 60S ribosomal protein L35 (RPL35A) [Arabidopsis thaliana] (TAIR:AT3G09500.1); similar to 60S ribosomal protein L35 (GB:Q9M5L0); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) -0.892321991006885 -10.0414405245716 9.74003757979649e-07 0.00450574138441386 10.7079317383476 15.8291447092283 -0.892321991006885 0.0650930241025154 NA NA AT5G48560_at 3.20400451324216 3.14586509411727 6.18886110291357 6.53701144314869 5.36533348165441 4.75129423690182 2.6798605263097 3.25407126094534 4.00232647175881 3.2323174173293 5.40709908992045 4.18023601398756 5.62970576164713 5.66060661330094 3.97416192080106 5.38074116421055 5.50191714078762 5.90080943019625 3.76915865867982 0.248240329310585 0.248491352945376 0.270352842292046 0.258755061003498 0.259316313134386 0.261929069519975 0.260271533398813 0.256068561295383 0.262867730031459 0.256277045046936 0.269585146896697 0.246760629100207 0.250344497905332 0.263663429154960 0.246926363029405 0.247210862397209 0.249158961975691 0.247359916330843 0.246760629100207 5 5 + 19702460 19704043 19703599.909 19701232 19704377 + gene protein_coding_gene TRUE TRUE AT5G48560.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G07340.1); similar to Os01g0915600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045188.1); similar to TA1 protein [Oryza sativa (japonica cultivar-group)] (GB:CAE00874.1); similar to Os11g0442500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067817.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.25782742766930 10.0362610043123 9.78867531062812e-07 0.0045272623311655 10.7049204308046 8.826959619627 1.25782742766930 0.157788563805905 NA NA AT5G02370_at 1.30023206532251 1.07830314948479 1.89245832895818 1.71987073801805 2.02725306272031 2.17351051924711 1.00745653137528 0.699653832869169 0.920104655711841 1.18629697533456 1.77640436049812 2.40488308003474 2.03242958706152 2.20336366348429 2.32786471239915 2.48949157720221 2.18340609253849 2.48691845211516 1.17548412711512 0.210629416153490 0.205631297868086 0.213817455264051 0.209003999087184 0.209847828737917 0.211398122056349 0.213280217072631 0.211103605055158 0.217279667195616 0.217671880493195 0.205631297868086 0.209561344564969 0.212826605177995 0.206532073369158 0.205631297868086 0.213702553949073 0.223309876203808 0.210569130790833 0.213067260247994 5 0|5 /|+ 505230 506360 505738 503406 507242 + gene protein_coding_gene TRUE TRUE AT5G02370.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G49650.1); similar to Kinesin, motor re (GB:ABE78033.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain DNA polymerase beta, N-terminal-like; (InterPro:IPR010996) 0.92539766073611 10.0345980640262 9.804346837605e-07 0.00453352997770855 10.7039530870959 3.15337083352637 0.92539766073611 0.0764526958837445 NA NA AT5G04170_at 7.97429662090103 7.85627570083548 8.8875597002523 8.6755295768276 9.14298357429458 8.7160845478827 6.49501229720266 6.4320175488918 6.53334487904482 6.08202856505915 8.33909316654394 8.31357347742474 8.5289713859712 8.45465789219035 8.44793762594145 8.18192183803792 8.31410428983884 7.9706361848189 5.82834303864459 0.169883318544439 0.165068942429289 0.163977220927173 0.164086670001224 0.167870802438271 0.175532047954161 0.169206782854505 0.172268959974602 0.176965455617174 0.169283123112166 0.164848637127990 0.163977220927173 0.172658178238351 0.169643261894627 0.164113415716933 0.164536033782689 0.163977220927173 0.164690925322065 0.167677366648826 5 5|0 +|/ 1145950 1146864 1146192.9 1145432 1147782 + gene protein_coding_gene TRUE TRUE AT5G04170.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G10300.3); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); similar to putative cysteine protease [Pisum sativum] (GB:CAB63845.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.952666052347555 10.0032243226527 1.01051749275449e-06 0.00467162236900399 10.6856542633864 15.2558536843087 0.952666052347555 0.0856746133727944 NA NA AT5G47380_at 2.33622311929186 1.91614352635722 1.56034997152083 1.83081564358918 1.94754553920261 1.72914402608696 3.42375701712587 3.21282525397744 3.80323803338163 3.46362672560174 3.67187071381973 4.45178575726723 2.65728336750323 2.97649022132089 4.13834110868569 3.49434325208365 2.5561004254501 3.29476312836515 3.74914534244693 0.257130201747074 0.243342022220733 0.257734119753371 0.254582027796208 0.252297321213797 0.250689706424848 0.243342022220733 0.247800421804743 0.243342022220733 0.245714935082184 0.243342022220733 0.252771018163007 0.243342022220733 0.243342022220733 0.257540930793235 0.243967601652326 0.256569197304442 0.248108499185333 0.261446053944172 5 5|0 -|/ 19238862 19239535 19239241.1 19238699 19241818 - gene protein_coding_gene TRUE TRUE AT5G47380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66600.1); similar to hypothetical protein 24.t00022 [Brassica oleracea] (GB:ABD64944.1); contains InterPro domain Protein of unknown function DUF547; (InterPro:IPR006869) -1.00850307637161 -10.0029341508330 1.01080035873169e-06 0.00467191925805786 10.6854845890213 5.78316331912169 -1.00850307637161 0.101175573194849 NA NA AT5G23870_at 6.46438134006174 6.32802634984668 7.39201708315003 7.38570452517857 9.2036170814985 8.45313435995349 6.49395616266083 6.02742993970726 6.76221025253645 5.55673325331307 9.43857665805474 8.23444426813334 8.74554312942367 9.04277475928632 8.16624190713758 8.7285315120457 8.70200218535676 8.66358793971253 5.70261928692996 0.246404413682714 0.240693608251990 0.240186995021317 0.250748276236462 0.231678273670189 0.242019576912972 0.231898276955947 0.239978920708955 0.256360141509673 0.246760361786418 0.228660183336665 0.226647242037921 0.231447472635239 0.231987166778994 0.228826983292716 0.226647242037921 0.239506712175738 0.226647242037921 0.238350001289331 5 5|0 -|/ 8046333 8047278 8046811.25 8045847 8050178 - gene protein_coding_gene TRUE TRUE AT5G23870.1|AT5G23870.2|AT5G23870.3 pectinacetylesterase family protein similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62060.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34281.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 1.23629996427671 9.97970071661671 1.03373020950892e-06 0.0047768672981407 10.6718734156332 14.5797335515006 1.23629996427671 0.154736763902295 NA NA AT5G23240_at 10.3263487363755 10.4141743821381 10.7481024499747 10.8518541016728 11.1075902997239 10.4566499289415 6.79094818540484 6.57607253410931 4.6027027151582 6.32034968833217 6.17458125666081 5.01555381725047 6.81466358449345 7.84384948232082 5.66891590441852 6.41779564042635 8.09237558291799 6.78609786368732 3.40641268998929 0.281688193575402 0.282953333443173 0.284156946991344 0.285790502715331 0.284038656652333 0.283677108993057 0.28055737012449 0.280259470188631 0.293208042103726 0.276276833281342 0.275647942466613 0.282746646791553 0.279590113994139 0.290047318599971 0.277381228808679 0.281008649799713 0.280842290272736 0.281212338300946 0.28545882390339 5 5 - 7826897 7827432 7827131.364 7826735 7828727 - gene protein_coding_gene TRUE TRUE AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42750.1); similar to H0103C06.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86103.1); similar to Os04g0675400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054247.1); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.08442926854517 9.97278697740443 1.04066215502937e-06 0.00480785915623568 10.6678132180431 15.3480763303002 1.08442926854517 0.1209369412439 NA NA AT5G26200_at 4.59421610653292 4.45394362173026 5.45357609016159 5.31989611418244 5.6171632023898 5.51412709518463 6.1306908326863 6.01546983363057 6.00923144206972 5.80353898415033 5.38530277153545 6.12174406657682 5.53191919527446 6.15529674540184 6.17429812521718 6.43343043361042 6.15606332019884 5.97852744233405 5.69640245112795 0.214459682014856 0.199497362367731 0.199528958163693 0.193495974930502 0.203519850328758 0.198838149335861 0.194328136634353 0.190205479764649 0.198755959735034 0.191572168080706 0.191876339178260 0.195132728331732 0.198674550662878 0.194973243318400 0.191011959306217 0.193153596631319 0.194026994294433 0.195678282477524 0.194184453233863 5 5 + 9157703 9158257 9158020.273 9157145 9158407 + gene protein_coding_gene TRUE TRUE AT5G26200.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to mitochondrial carrier, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94258.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.831514947599578 -9.94519426400453 1.06883428760592e-06 0.00493694557445176 10.6515639518265 11.3016172228796 -0.831514947599578 0.0428948804671502 NA NA AT5G43745_at 4.72982992571118 4.71702152899313 4.47628649680701 4.62637921045188 4.55065157193942 4.19754289368118 5.89369093814541 5.54551801906978 5.60617795628127 5.6654587661308 6.57188958239245 7.31137600239707 5.79837059452857 6.20772822302949 6.80862328365277 6.50131489571109 5.60987091049964 6.65438185368427 5.64575880807608 0.223759442787353 0.218347606818629 0.217621834364279 0.222241327879822 0.221772232236723 0.223379029570485 0.219152958582635 0.217533367395964 0.217680321469232 0.221899072816812 0.230626270040567 0.220892730586163 0.238965277049928 0.231755335931211 0.218609308841180 0.214169674775156 0.221931989973654 0.21873076847416 0.219495828539972 5 5|0 -|/ 17586663 17587686 17587256.1 17586374 17592198 - gene protein_coding_gene TRUE TRUE AT5G43745.1 phosphotransferase-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to Os03g0163100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049055.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN06856.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) -0.960192453432136 -9.93752129717185 1.07681470884411e-06 0.0049727303254421 10.6470325351276 10.8781532039664 -0.960192453432136 0.089688740939135 NA NA AT5G07700_at 2.53799718502296 2.77192905529022 2.97211967253084 3.10584248139929 4.21031511476319 4.2904631956453 2.44020934377664 2.71969032680905 1.33704170176973 2.88699653676816 3.81552526519749 3.73222867247185 3.80925879956624 3.81571064939477 3.02799640250855 3.47511018969767 4.36404374929476 4.61786327969188 2.27387456811352 0.206896403309038 0.200939410571036 0.207042373730925 0.203180149928671 0.212786473901345 0.210284615049087 0.211727710352839 0.203230235038547 0.213844862451834 0.200939410571036 0.203736321881413 0.205186071654694 0.206853762367077 0.210442138977730 0.205448202881364 0.200939410571036 0.223079218090317 0.218214189448398 0.212645786709937 5 5 + 2451017 2451441 2451249.636 2450326 2451579 + gene protein_coding_gene TRUE TRUE AT5G07700.1 MYB76 (myb domain protein 76); DNA binding / transcription factor Encodes a putative transcription factor (MYB76). similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to Os04g0461000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052993.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.892074057557724 9.9278432632584 1.08697290072907e-06 0.00501855388266611 10.6413090047489 6.13016482766887 0.892074057557724 0.0686002404725221 NA NA AT5G45920_at 6.6866585106105 6.87458361964671 6.36673492216408 6.35287389794848 7.4042020513764 6.84990980229931 8.24848332932133 7.49465550445761 5.55822005624562 6.34751971533197 5.97976648180821 6.30222237388927 6.4359912921515 6.0444333275343 5.98091152605002 6.28047366886286 6.69537203725911 6.16290876732455 6.43967075524824 0.242351276989751 0.233257014307955 0.243985457423464 0.236611186505948 0.234990610286423 0.245706442787254 0.237914582839576 0.235700183078136 0.243659079070787 0.236529473886108 0.230317011099116 0.225718216464417 0.239287347188646 0.239149663095234 0.233074951976908 0.225965871457244 0.235824413456667 0.23488672893246 0.230073890614827 5 5|0 +|/ 18640452 18641826 18640944.111 18639986 18642012 + gene protein_coding_gene TRUE TRUE AT5G45920.1 carboxylic ester hydrolase similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G62930.1); similar to putative CPRD49 [Oryza sativa (japonica cultivar-group)] (GB:BAD69418.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -1.27679136323794 -9.90714408388992 1.10904989237666e-06 0.00511937430321066 10.6290376754305 13.2099610930457 -1.27679136323794 0.165174694511924 NA NA AT5G57110_at 6.4051095146937 6.4693355696715 5.21141804951639 5.05572103489911 6.87707764668134 6.25581446341497 2.25649722774966 2.02769769069236 1.76859689526669 2.47374216865792 4.14923790465054 4.88337275573238 3.83582775073612 4.09692385633231 4.75841456972855 4.32884616418009 3.9608451847346 3.79533888271499 2.12744349142637 0.295219570099093 0.298021831123011 0.282443104988998 0.283289418367028 0.297466037834105 0.290141318327257 0.288068310342601 0.291963815268555 0.297580790280004 0.311086971690727 0.280756559934273 0.280756559934273 0.284849130769048 0.280756559934273 0.280756559934273 0.280756559934273 0.293442489465348 0.293010725548677 0.290630255372133 5 5|0 -|/ 23127205 23128147 23127652.333 23126665 23134789 - gene protein_coding_gene TRUE TRUE AT5G57110.1|AT5G57110.2 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding|ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calmodulin binding Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. Identical to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) (ACA8) [Arabidopsis Thaliana] (GB:Q9LF79;GB:Q9LU75); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) [Arabidopsis thaliana] (TAIR:AT3G63380.1); similar to ACA9 (autoinhibited Ca2+ -ATPase 9), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G21180.1); similar to putative plasma membrane calcium-transporting ATPase [Physcomitrella patens] (GB:CAD21958.1); similar to putative calcium-transporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD27978.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain ATPase, P-type cation-transporter, C-terminal; (InterPro:IPR006068); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014) 1.06148477612217 9.86474974002366 1.15580053974353e-06 0.00533401949091638 10.6037765496441 8.2445147673573 1.06148477612217 0.118221001021552 NA NA AT5G42900_at 4.35730907573537 4.39127577864232 3.8846116990594 3.88623565970656 6.36754931839915 6.74290442251463 1.16509810962189 1.63239713212691 1.48160278469858 1.23413508878212 1.53848003296348 1.60456642389426 1.88140601675451 1.80379643443452 1.69459096560014 2.02882861648785 1.94914277145108 2.01189966156826 1.44482805544015 0.257621258113020 0.242176185101753 0.243132902228331 0.232524303218297 0.254047284042318 0.244590915291114 0.234281463718877 0.232555079680942 0.236941482042772 0.228753020736242 0.237535928161975 0.228592793365243 0.241350719705427 0.23257881638123 0.233004390160139 0.231379328621131 0.229858787834767 0.239818355290152 0.234466796758851 5 5|0 -|/ 17215623 17216381 17216069.3 17214869 17217021 - gene protein_coding_gene TRUE TRUE AT5G42900.1|AT5G42900.2|AT5G42900.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein MtrDRAFT_AC151424g24v1 [Medicago truncatula] (GB:ABE88920.1) 1.00476359905372 9.86415764226306 1.15646843626855e-06 0.0053359453649431 10.6034225191430 5.65389473699305 1.00476359905372 0.103892802762728 NA NA AT5G65020_at 8.39092947003737 8.49774997892673 6.89790935195262 7.05405246912196 8.2744481856145 8.08735263113116 8.50313809861275 8.58828257021063 7.62384505289343 8.38693224286714 8.98379220788428 9.72441909924725 8.66838226796385 8.7266076454091 9.75225937042888 8.8510640289304 8.33973654497906 9.10521113316539 8.07243670539588 0.131580652588555 0.127693657764966 0.154856215339380 0.153885760822690 0.129211859584047 0.136727598759814 0.134466951534318 0.128558751510613 0.152320547409957 0.135307533813719 0.136487354776494 0.130940949078694 0.145224944952302 0.138416743243124 0.134299992868477 0.133330842297550 0.133966180142186 0.129022354010063 0.131759537173584 5 5 + 25992053 25992755 25992492.364 25991041 25992952 + gene protein_coding_gene TRUE TRUE AT5G65020.1 ANNAT2 (ANNEXIN ARABIDOPSIS 2); calcium ion binding / calcium-dependent phospholipid binding Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides. similar to ANN7 (ANN7, ANNEXIN ARABIDOPSIS 7), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10230.1); similar to 80C09_22 [Brassica rapa subsp. pekinensis] (GB:AAZ41833.1); contains InterPro domain Annexin; (InterPro:IPR001464); contains InterPro domain Annexin, type plant; (InterPro:IPR009118) -0.835059026974612 -9.85592406453996 1.16579959275963e-06 0.00537783352140016 10.5984959494733 16.5600688632692 -0.835059026974612 0.0483456696630092 NA NA AT5G24530_at 11.2162698295896 11.3898427974131 12.4457571860851 12.4343070307261 12.0190597779844 11.7318048180434 5.77526018637826 6.07333308893632 10.9710900170588 6.98877556707921 8.04151777231186 8.97499591242936 8.7749617818221 8.88091401558218 7.6663149120523 9.35424537355855 8.18664462694043 8.73539043170927 8.68003190010403 0.240681807686677 0.239726316555933 0.240102577708059 0.239726316555933 0.240798767270298 0.24052630008553 0.272016576248225 0.260669450081871 0.244333261992307 0.250172683506601 0.248989707999346 0.239726316555933 0.240652391441181 0.246359074669979 0.239726316555933 0.242584643989465 0.248033029930509 0.249632513658657 0.239726316555933 5 5 + 8382060 8383019 8382371.273 8378836 8383404 + gene protein_coding_gene TRUE TRUE AT5G24530.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE85154.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.910390372918302 9.82976233265746 1.19599520023315e-06 0.00551592986347529 10.5827986005234 19.1141238050853 0.910390372918302 0.0777055038700096 NA NA AT5G56630_at 8.8390652069326 9.02388613297981 9.82139034358323 9.8493559853216 9.53215083159418 9.45738099233743 7.84308910681759 8.00567253464334 6.17772282389195 7.34929904110317 8.78646940380747 9.04584856420968 8.88037345009569 8.65786175515288 8.79898357100569 8.78672037735029 8.7083178973834 9.00343934172774 6.63339267600004 0.166446696957041 0.160989302575337 0.156677758194755 0.158153777061430 0.156677758194755 0.15903634833588 0.162423407202753 0.162075578338712 0.192149626691081 0.173814598720869 0.161656192804808 0.157527564705051 0.156677758194755 0.167583369544865 0.159424111571016 0.159456958284422 0.167572119665357 0.169739779507158 0.182189193888119 5 5 + 22943291 22943908 22943606.909 22941148 22944189 + gene protein_coding_gene TRUE TRUE AT5G56630.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE84859.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.822160612375344 9.7896065673556 1.24400629708314e-06 0.00573611303585034 10.5585755049433 16.8233188794879 0.822160612375344 0.0447823045764877 NA NA AT5G64510_at 5.43852275975485 6.03244682058580 8.39060698410926 8.57861689932512 6.41528313050258 6.5620167044792 2.98662810281579 2.5841165706955 2.39279235169423 2.12377198463689 2.43962217841342 2.75395431569790 3.22343414278038 2.50242085795516 2.88086778652756 3.20932253620051 3.64157888809133 3.07994099610745 2.62862313360816 0.264065805523802 0.265134493078412 0.272154339726501 0.264844401753414 0.265328361392804 0.283838794062859 0.257387347289596 0.263943484206096 0.261827997598419 0.263935305902715 0.274105897097887 0.267710542911190 0.26111219203921 0.264260108404742 0.262692367669633 0.261479097800724 0.266972583584230 0.263207875060498 0.261062980573567 5 5 + 25802921 25803337 25803117.909 25801630 25803533 + gene protein_coding_gene TRUE TRUE AT5G64510.1 similar to ORF; able to induce HR-like lesions [Nicotiana tabacum] (GB:AAC49976.1); similar to Os01g0767600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044361.1) 1.10296116113209 9.7615409954857 1.27880218066925e-06 0.00589527805288526 10.5415521682750 8.54759068121758 1.10296116113209 0.130841204894884 NA NA AT5G43880_at 6.61928746799119 6.67384764769741 5.71523221500403 5.78082230241158 7.11496820712057 7.07859601754533 7.53821739904626 7.87450300829809 7.30827045122507 7.70540601020628 9.0034180021009 8.8089851347664 8.40148168218677 8.82293124024877 8.66068719623151 8.74613178299556 7.52167874474746 8.58011425264746 7.60360767824523 0.207213570865222 0.201174375160291 0.231325049808323 0.214903573662654 0.205379789308074 0.211045382980574 0.202964044426876 0.201292769780816 0.222336075522274 0.200290961132941 0.200019346427502 0.20150087067999 0.200019346427502 0.200706555216885 0.200890253925829 0.202557679718524 0.209909050405183 0.205166051560616 0.203268565145151 5 5 - 17657472 17657771 17657624.727 17657045 17660875 - gene protein_coding_gene TRUE TRUE AT5G43880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89949.1); contains domain PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED (PTHR21726); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6B6 (Hypothetical pro (PTHR21726:SF6) -0.853856656519684 -9.74788386770717 1.29611514627849e-06 0.00597379470919756 10.5332404290306 14.8530708919974 -0.853856656519684 0.0603685065803939 NA NA AT5G50740_at 5.96202938576726 5.58885267373984 3.94190797789214 3.83757019480893 4.34190160961977 4.4010277441017 5.05234889772909 4.53172395891009 6.22542825206573 6.03147757432887 7.98220804172711 8.6669126476976 7.17720958886079 7.55654593797742 8.36793062802539 7.20828212865051 5.54419066393266 7.06060259888865 6.7072668294321 0.201135242283002 0.201744922701400 0.222700357541883 0.213923337198009 0.202865134573111 0.212409392959792 0.205762175032769 0.201849615784238 0.200895449012314 0.201126639028405 0.210760285993875 0.215923069574988 0.207297010294403 0.206665061900072 0.208862008929691 0.203522837174048 0.204249599654848 0.200534287464026 0.202817466755853 5 5|0 -|/ 20653216 20655038 20654013.81 20653092 20655222 - gene protein_coding_gene TRUE TRUE AT5G50740.1|AT5G50740.2 metal ion binding| similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to OSIGBa0096P03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66434.1); similar to putative farnesylated protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23078.1); similar to Os02g0510600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046934.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to OSIGBa0096P03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66434.1); similar to PPAK motif; Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84491.1); similar to Os04g0390100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052639.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -1.02650288864814 -9.7417354567288 1.30399228412117e-06 0.00600879644523035 10.5294925154797 11.5906083876939 -1.02650288864814 0.112777144366133 NA NA AT5G59430_at 8.40457839995056 8.46219519091371 8.43433040870435 8.5613337495064 9.3739330551711 9.13374735379432 9.354508220142 9.1899026715166 8.62998441002419 8.53078669890919 8.12347691704288 9.0606505966234 8.24063848940905 8.46009957162329 8.24312946150129 8.78357553056635 8.43184227663468 8.26545988698054 8.3963885161483 0.143745922385106 0.143952018909452 0.14659441974899 0.142274702176578 0.149762726503100 0.149719177734446 0.144929446029862 0.146854330558366 0.145805380558999 0.146504696595906 0.147235305730016 0.145907657454707 0.148101911678943 0.144115299152283 0.149666361787323 0.141725588806518 0.144613524154811 0.141725588806518 0.150716961012036 5 0|5 /|+ 23987178 23987808 23987497.2 23984539 23988171 + gene protein_coding_gene TRUE TRUE AT5G59430.1|AT5G59430.2|AT5G59430.3|AT5G59430.4 ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1); DNA binding|ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1) similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to telomere binding protein [Solanum lycopersicum] (GB:BAF36749.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to telomere binding protein [Solanum lycopersicum] (GB:BAF36749.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.1); similar to telomere binding protein TBP1 [Nicotiana glutinosa] (GB:AAN39330.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.840870921989139 -9.72570703891672 1.3247726251004e-06 0.00610322748383755 10.5197044939002 17.3493972810415 -0.840870921989139 0.0558711212542325 NA NA AT5G06270_at 2.63232179929985 2.95516347856076 2.35563634441981 2.53299629045965 2.02939802673232 2.39735388723719 4.13431966408275 4.32129681041135 3.96762329765251 4.07190394080374 4.85495859535582 5.18595710126877 4.83187628702878 4.97420275033343 5.40115237273046 3.77574202544404 4.10396998229912 4.05127475618097 4.20445674800549 0.25427282484929 0.25427282484929 0.267290278153040 0.258387195900430 0.263248602866450 0.263524565873505 0.257739538760202 0.257621694230173 0.262357529611441 0.25427282484929 0.25427282484929 0.257144668989650 0.260187748113616 0.264805132378167 0.260452121514293 0.25427282484929 0.262861067741821 0.257765942602815 0.257280864073975 5 5 + 1912920 1913234 1913063.545 1912551 1913675 + gene protein_coding_gene TRUE TRUE AT5G06270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11600.1); similar to H0913C04.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86164.1); similar to Os04g0415000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052757.1); similar to Os02g0536500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047044.1) -0.951571697172397 -9.63210477276032 1.45353104584566e-06 0.0066949639971651 10.4620357297814 7.28417065230917 -0.951571697172397 0.0957346265923157 NA NA AT5G01790_at 4.60074501530808 5.39516835977436 4.3803386693931 4.29788892470466 4.99099403304631 4.7623990871207 8.00041530774092 8.43427401845789 4.83450303132268 5.93319026912906 6.96809560198316 7.8093626500149 8.40888226043897 6.3645307829496 7.00248234775276 7.1476491977535 5.92542970317313 6.70583656838772 5.57843286336674 0.267710502029456 0.271916674136657 0.266956254750906 0.272942978219488 0.265979291927674 0.267291068137494 0.266431995596605 0.268206782448044 0.2952080884329 0.263374548565004 0.262569467395566 0.261153416504024 0.261153416504024 0.273314189777091 0.266065416803774 0.261153416504024 0.285977725261841 0.290611484680293 0.269522513297762 5 5 - 305068 305591 305363.455 304894 305693 - gene protein_coding_gene TRUE TRUE AT5G01790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40475.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20927.1); similar to Os01g0166500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042116.1); similar to Os05g0335500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055233.1) -1.22706516827215 -9.62891482464754 1.45815184596293e-06 0.0067147892506593 10.4600549713509 11.8528991071080 -1.22706516827215 0.162191594916184 NA NA AT5G39090_at 5.39683065505886 6.07778378607453 8.58833239958654 8.79464980307824 7.26892093358918 7.41989118609653 5.07973883664096 5.38311184940245 4.11690076682698 4.48915643830890 5.64161891020865 5.24415609646227 6.50652792669284 6.39808793794051 5.6834324843104 7.09961029357349 7.0112048049456 6.11746503743587 4.82112073400613 0.228949650107037 0.226444960125736 0.238468375078796 0.239458759965796 0.227088338492590 0.239268559035547 0.244537711203675 0.232790403184209 0.259651725437499 0.23940982267227 0.229032652845178 0.227664604704345 0.231427366834374 0.232043548953358 0.231429225637957 0.226444960125736 0.242483250058473 0.228684144034179 0.242649176509174 5 5 + 15661612 15662109 15661831.818 15660831 15662344 + gene protein_coding_gene TRUE TRUE AT5G39090.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 1.10248119352937 9.5501379239159 1.57747323407722e-06 0.0072626867696915 10.4108136362494 12.0954018892710 1.10248119352937 0.13638324195834 NA NA AT5G07090_at 9.36372161320815 9.31123569135664 8.80406369932168 8.91571034071797 9.15887616364847 8.79539020645764 9.48508034493516 9.74932625842123 9.08691809787545 9.0702763941608 9.37437159704506 9.88073159927348 9.3582154263541 9.13560722353317 9.98392392252072 9.064545962137 8.91563550751358 8.89976553308434 9.00666521241881 0.132817461742013 0.130723469440475 0.135959207861548 0.131550830321398 0.136107572324862 0.142906750204599 0.134633643922486 0.126530122811985 0.143484958300552 0.134553631019768 0.129360300072912 0.129845846501778 0.126530122811985 0.134246261616054 0.131585304553319 0.132161749492093 0.135921738395011 0.138652562888537 0.131843381961613 5 5|0 +|/ 2203050 2203778 2203536.6 2202381 2204079 + gene protein_coding_gene TRUE TRUE AT5G07090.1|AT5G07090.2 40S ribosomal protein S4 (RPS4B)|structural constituent of ribosome Identical to 40S ribosomal protein S4-1 (RPS4A) [Arabidopsis Thaliana] (GB:Q93VH9;GB:Q7XJS7); Identical to 40S ribosomal protein S4-3 (RPS4D) [Arabidopsis Thaliana] (GB:Q8VYK6;GB:Q944M1;GB:Q9FGI0); Identical to 40S ribosomal protein S4-2 (RPS4B) [Arabidopsis Thaliana] (GB:P49204;GB:Q42346;GB:Q9FL39;GB:Q9LYQ6); similar to 40S ribosomal protein S4 (RPS4D) [Arabidopsis thaliana] (TAIR:AT5G58420.1); similar to 40S ribosomal S4 protein [Glycine max] (GB:AAM93434.1); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain RNA-binding S4; (InterPro:IPR002942); contains InterPro domain Ribosomal protein S4E; (InterPro:IPR000876); contains InterPro domain KOW; (InterPro:IPR005824) -0.893361588277669 -9.54843201058105 1.58017155832821e-06 0.00727352968298474 10.4097403534254 18.3885352887172 -0.893361588277669 0.0806456436194608 NA NA AT5G42720_at 3.39077671000795 3.57550548794143 3.55416018287354 3.49007751021003 2.91399922976257 2.53309735538502 5.23720266041173 5.79591645507445 4.80401095184102 5.978775117330 6.12882774118754 7.82958422610706 6.14797521077713 6.39477353961922 7.1685517681333 6.52445463295946 6.15891912835066 6.47099863656078 5.64186636079497 0.299362172547477 0.291616477629441 0.302833115731438 0.298335195455770 0.29153839985791 0.305023095352001 0.293075298536685 0.289141170731048 0.304152066015053 0.285170926320794 0.290009331154038 0.288024899925145 0.287201944680671 0.294778558978409 0.295145455802653 0.287368824739131 0.301449223986841 0.290186511942072 0.286833350844808 5 5 + 17149205 17149950 17149626.2 17147417 17150071 + gene protein_coding_gene TRUE TRUE AT5G42720.1 glycosyl hydrolase family 17 protein similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G34480.1); similar to beta-1,3-glucanase-like protein [Olea europaea] (GB:AAK58515.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.04160196952779 -9.5465103796231 1.5832170906625e-06 0.00728596505122882 10.4085309957143 9.85028932585028 -1.04160196952779 0.121813601037303 NA NA AT5G58540_at 3.28028074286445 3.15020536467038 3.89163444473725 4.22942845532255 4.33375262426838 3.95688816809898 0.986680980071056 0.836391361571474 1.17213737893286 0.607673670349835 1.00917304463051 0.998733146608966 1.42413280877377 1.16669880228112 1.34085567225174 1.33008806988617 1.10625166096193 1.01069221778674 1.14659203364896 0.254727859608601 0.252724992126190 0.265005242592559 0.265706872065488 0.260342179946569 0.251649072129021 0.248713945455278 0.256658330084489 0.260700258504363 0.268899027647069 0.252636680071407 0.251448307495059 0.254522044700599 0.254161786995152 0.255342100657266 0.249165167928435 0.256696084006081 0.256116042250848 0.257621945729003 5 0|5 /|+ 23681845 23682337 23682058.6 23680362 23682542 + gene protein_coding_gene TRUE TRUE AT5G58540.1|AT5G58540.2|AT5G58540.3 protein kinase family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.93622247148501 9.53440590285161 1.60254806165508e-06 0.00737332363167502 10.4009045145781 4.15755570380465 0.93622247148501 0.0940943555077202 NA NA AT5G51750_at 3.50092124452871 3.79139304316837 1.60296450289347 1.18110811255739 1.64903690678431 1.49867393412282 2.18702952728495 2.16072551864249 2.76780921331849 2.82312928453755 2.77189775148560 5.53618137586732 3.08548742322277 2.1864695903725 5.32892390967882 3.6536533954059 1.85593481003563 2.74124424743149 3.80255012539608 0.236893071759511 0.234792755127017 0.240474033976524 0.233783708220345 0.232789554123056 0.227083408912998 0.225773200886217 0.223888047298118 0.224202469902069 0.224883603525280 0.223888047298118 0.243241979362057 0.223888047298118 0.227715647920934 0.245883255647811 0.235607632497984 0.224808115898958 0.225762085017683 0.228595888990508 5 5 + 21039321 21039791 21039560.909 21037433 21040007 + gene protein_coding_gene TRUE TRUE AT5G51750.1 subtilase family protein similar to ARA12, subtilase [Arabidopsis thaliana] (TAIR:AT5G67360.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to SLP2 (subtilisin-like serine protease 2), subtilase [Arabidopsis thaliana] (TAIR:AT4G34980.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE79364.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE87035.1); similar to SBT2 [Solanum lycopersicum] (GB:CAA67430.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.925632308456744 -9.4823944858393 1.68857331194422e-06 0.00776743723494341 10.3679637317680 5.45955006742525 -0.925632308456744 0.092489194883303 NA NA AT5G44110_at 4.53600544159757 4.63009246914203 4.20071714176849 3.87647975605796 3.0435232286649 3.67571829085669 5.15333713154779 5.41137270928295 4.49408461195329 4.58886812900410 5.23950272607156 6.02753920546854 4.47144067148145 5.02938655539976 5.84235537607404 4.71827983478969 4.13380470256374 5.07904405007312 3.77685054461746 0.231283448353428 0.235314950314261 0.238959521554407 0.235320816029666 0.237167214918309 0.245918872381438 0.230721930180886 0.239315509637302 0.235045612148933 0.230721930180886 0.230721930180886 0.236612218032208 0.230721930180886 0.234456181451490 0.233324011021430 0.235290665381479 0.242164234853379 0.230957914942306 0.234591934004861 5 0|5 /|- 17771470 17771960 17771641.889 17771291 17772969 - gene protein_coding_gene TRUE TRUE AT5G44110.1|AT5G44110.2|AT5G44110.3 POP1 Encodes a member of the NAP subfamily of ABC transporters. Identical to Non-intrinsic ABC protein 2 (GCN-related protein 1) (NAP2) [Arabidopsis Thaliana] (GB:Q9XF19;GB:Q8LBC2); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439)|Identical to Non-intrinsic ABC protein 2 (GCN-related protein 1) (NAP2) [Arabidopsis Thaliana] (GB:Q9XF19;GB:Q8LBC2); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439)|similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -1.07216135281428 -9.4529947227059 1.73940526405696e-06 0.00799952480939796 10.3492205239511 8.99304088883072 -1.07216135281428 0.131821226017429 NA NA AT5G42370_at 3.41032327157825 3.95975562754451 5.92215134890489 5.87450664317684 6.52108800416766 6.01358468202985 3.97253331581406 3.98929531114334 2.40623863217833 2.98939464711592 3.75579168489069 3.65151365076536 4.9681882553873 4.8147614680187 4.10768346655407 4.53989914353838 5.08498998718987 4.56066494644284 3.4310573644987 0.259123794481113 0.255989551095577 0.277945282776549 0.267465652289489 0.260004868090586 0.271476243985627 0.256323285601372 0.259489598244274 0.279118595522593 0.264360382010751 0.256862342435956 0.255989551095577 0.258534814778753 0.255989551095577 0.261618779264580 0.257007159586585 0.260188113193325 0.266606044691561 0.257774038868321 5 5|0 -|/ 16956739 16957368 16957125 16956346 16958953 - gene protein_coding_gene TRUE TRUE AT5G42370.1 similar to alkaline phosphatase D [Pseudoalteromonas haloplanktis TAC125] (GB:YP_340375.1); similar to Os02g0592200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047291.1); contains domain Metallo-dependent phosphatases (SSF56300); contains domain no description (G3D.3.60.21.10) 1.05898552805166 9.41271845894998 1.81175501976237e-06 0.00833044958086735 10.3233976963751 8.64673817051795 1.05898552805166 0.129731744056297 NA NA AT5G17050_at 6.51414252582713 6.85340676571814 7.61372124860531 7.5049974474657 6.72821050646364 7.00603805866374 7.7615530762408 8.16921190984733 7.57038714802021 7.64793955840061 7.61664443099541 7.5548403248212 7.76467109587742 7.924949135598 7.41528423871692 8.03646978008671 8.14762895188853 7.52204394168301 7.54049665079113 0.130149304805915 0.133735476589154 0.124351681403843 0.124230260961039 0.131196001268333 0.128364430982125 0.129315176339345 0.129883367705541 0.130009595996754 0.130224880389188 0.123499590299042 0.123127015316870 0.129736613783815 0.123485031346198 0.123468215719411 0.127337208480714 0.132907707287271 0.123428296037258 0.124199453517070 5 5 - 5607885 5608406 5608199.091 5607791 5609495 - gene protein_coding_gene TRUE TRUE AT5G17050.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17040.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G30530.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17030.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:BAB41020.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.96102721174985 -9.38433655407234 1.86469606496316e-06 0.00857200781063564 10.3050992054932 14.9359556622852 -0.96102721174985 0.105306992585878 NA NA AT5G62720_at 9.7144528204465 9.6448404869754 10.1051794274243 9.86864589403623 11.0227426010617 10.5180606969653 8.74373697844879 8.27737364737813 8.35851212906367 8.11567831780482 10.4552502883541 10.6155539219734 10.3855866397080 10.5255298987912 10.8401084659839 9.96938345698907 10.0628876819857 10.5503997708214 8.13227049588704 0.135478182105969 0.137582953151462 0.136699990783605 0.137287508652848 0.135456129780916 0.140825577155916 0.133532054713893 0.160453117286681 0.151255343637888 0.154461285173466 0.136640422040021 0.133491499688107 0.138128289983883 0.133491499688107 0.137781429509395 0.133491499688107 0.153360302049798 0.138497624206530 0.151317553378224 5 5|0 +|/ 25209343 25211851 25210125.8 25209068 25212235 + gene protein_coding_gene TRUE TRUE AT5G62720.1|AT5G62720.2 integral membrane HPP family protein similar to integral membrane HPP family protein [Arabidopsis thaliana] (TAIR:AT3G47980.1); similar to Os03g0684700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050921.1); similar to hypothetical protein [Oryza sativa] (GB:AAK14421.1); contains InterPro domain HPP; (InterPro:IPR007065) 1.04005106550193 9.3666745488887 1.89848636164632e-06 0.0087254433181265 10.2936694542905 19.0507496506726 1.04005106550193 0.126340876515232 NA NA AT5G23820_at 6.07105361293264 6.65285487545383 2.40569670009825 2.80457478815120 1.79228288394055 2.65570928479867 4.48710328760983 4.23129395040662 3.07211447304187 3.57101981133802 4.48676226453356 6.51731421409432 4.3988685815423 4.10133332888452 7.21406788111218 5.86272704164615 3.35860792063693 4.71594167092294 3.3733925418135 0.268053568151299 0.261686263672756 0.261871276675122 0.259416662389605 0.263697319904404 0.264366893634670 0.25213978340329 0.258682545300127 0.255013474851517 0.253481240801987 0.255570432317306 0.255922990934882 0.251425459355704 0.251425459355704 0.259297112872926 0.251425459355704 0.266938844573632 0.254987757318472 0.256206835980384 5 5|0 +|/ 8031448 8032716 8031959.6 8031271 8033018 + gene protein_coding_gene TRUE TRUE AT5G23820.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23840.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) -1.35501464942914 -9.32616265100697 1.97852698752270e-06 0.00909133150766681 10.2673284841984 8.09796874208365 -1.35501464942914 0.197959710602235 NA NA AT5G05390_at 1.16713729563954 1.10783980550334 2.79940328355606 2.81445668537237 1.79381026388040 2.35936793208622 1.41685637095538 1.24374995925760 1.19584282611655 1.46626795848458 1.90833991732646 1.78523306308313 2.20946863293618 2.60524367766596 1.87174786592099 2.06895470207056 4.21113326432796 1.77393934125304 1.36087642504400 0.232801772600071 0.23535458832119 0.234867563468247 0.233220509153306 0.225886346539895 0.232301130327109 0.230610038908321 0.233521850255982 0.241023440253443 0.230959732747783 0.227040767245761 0.233510760517689 0.234474951010966 0.235808729462389 0.229798600850438 0.226879540754053 0.262091010159539 0.230099017291993 0.231248171161529 5 5 + 1596373 1597019 1596666.727 1594754 1597043 + gene protein_coding_gene TRUE TRUE AT5G05390.1 LAC12 (laccase 12); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to LAC3 (laccase 3), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G30210.1); similar to LAC13 (laccase 13), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07130.1); similar to LAC5 (laccase 5), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G40370.1); similar to laccase [Populus trichocarpa] (GB:CAA74104.1); similar to Multicopper oxidase, type 1; TonB box, N-terminal [Medicago truncatula] (GB:ABE84876.1); similar to diphenol oxidase laccase [Glycine max] (GB:AAM54731.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.941492059693027 9.27774564859408 2.07901748275971e-06 0.00955100631579812 10.2356192691538 3.66045434684207 0.941492059693027 0.102900477624566 NA NA AT5G05600_at 3.98202170283185 4.75079496223571 6.06167854001501 6.49833804568962 4.48071771379 4.76601878086797 2.15815778241874 1.89992070124375 1.91286425304883 2.85007220354996 2.84902811452352 2.78577297147117 3.00729474290306 2.92514631723633 2.64838902732506 6.14034946950532 2.97537030413410 3.56639991218318 1.30315731843318 0.271374581038855 0.275630267862639 0.276688198878164 0.270278784788411 0.265123133527251 0.271160380067095 0.267442995824463 0.281718164394799 0.269190791484838 0.265387886011015 0.263695343702484 0.262198908155442 0.262198908155442 0.268192011661232 0.262739201607147 0.277811416313298 0.266046641107488 0.265123159587070 0.268147953121993 5 0|5 /|+ 1673303 1674576 1673916.6 1672121 1674740 + gene protein_coding_gene TRUE TRUE AT5G05600.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G11180.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE94015.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.19790675522540 9.23617039109545 2.16972992774991e-06 0.00996556955815533 10.2081909128431 7.01683108651369 1.19790675522540 0.166866961247236 NA NA AT5G58260_at 9.80257331967182 9.69914365094626 9.21875076564673 9.43295066342001 9.95039299720537 9.69708100744649 10.7071003818594 10.7164437930453 10.2013504005281 10.3427207263754 10.5078888597489 10.7220267068350 10.5385642116681 10.4895389396018 10.8220904546116 10.9570313012344 10.3259377584322 10.4238237141043 10.2269144930349 0.095368017071339 0.0923715712079852 0.0946734289049277 0.099440963881884 0.0951415249486164 0.0961162141368273 0.0944976210455178 0.098394625702733 0.115562534288369 0.0923715712079852 0.0923715712079852 0.0940394672238848 0.0923715712079852 0.0975375881226482 0.0967448988692265 0.0923715712079852 0.100642761616233 0.0991791274524553 0.0938947463553938 5 5|0 -|/ 23578329 23579101 23578719.1 23578102 23579170 - gene protein_coding_gene TRUE TRUE AT5G58260.1 Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. similar to Os01g0882500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045009.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82572.1) -0.808374051138476 -9.23447636842713 2.17351593732388e-06 0.00998078518419127 10.2070693808665 20.330733547368 -0.808374051138476 0.0601557417677662 NA NA AT5G66740_at 0.74658347257646 1.20322610282628 1.16788398131136 1.49929267575108 1.31020436124645 0.987243210785873 5.21111199804583 5.23189201639909 2.54794254860443 3.33815138978068 3.43077934041383 3.46010908070147 3.88787301199176 4.22935646302949 3.13561484375616 4.42080692500647 2.85124497927647 3.25919490581491 3.06953914526033 0.290993412988712 0.273700920688369 0.277010969754375 0.267986574114929 0.283777438884234 0.285292267017243 0.278190599146171 0.281624899615049 0.271499378502565 0.267986574114929 0.269961747969108 0.273012784720087 0.267986574114929 0.269737324510547 0.267986574114929 0.270765113676357 0.278202570492648 0.272668241224031 0.273865176227668 5 5 + 26665124 26665754 26665429.364 26664956 26665784 + gene protein_coding_gene TRUE TRUE AT5G66740.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G75160.1); similar to BAC19.5 [Lycopersicon esculentum] (GB:AAG01120.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) -0.972137952999887 -9.23335205906978 2.17603263497953e-06 0.009990165827191 10.2063248583417 5.45447146318312 -0.972137952999887 0.112564034743203 NA NA AT5G15310_at 4.65117005920813 5.61623613797436 3.77422953553615 3.74006637953856 5.95712326660579 5.08497654878214 6.50003699463162 6.96953405327734 5.78874832334556 5.9131348256797 6.18875211717766 7.4041048445734 7.21265555367809 6.17747603768679 5.66688348869959 6.89957169308074 5.19038954423433 5.78891788794342 6.56789607804001 0.265551366223347 0.267509278861924 0.287362775604206 0.278956978760192 0.267023536567502 0.274733179984794 0.269497296869615 0.271443778485741 0.278651864086692 0.265551366223347 0.265551366223347 0.269288384943921 0.271302256710331 0.276300893331924 0.272781386671282 0.265551366223347 0.294680263946533 0.269038881519028 0.267655669319939 5 5 + 4975439 4976082 4975756.636 4974674 4976230 + gene protein_coding_gene TRUE TRUE AT5G15310.1|AT5G15310.2 AtMIXTA/AtMYB16 (myb domain protein 16); DNA binding / transcription factor|AtMIXTA/AtMYB16 (myb domain protein 16) Member of the R2R3 factor gene family. similar to MYB106 (myb domain protein 106), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01140.1); similar to protein 1 [Petunia x hybrida] (GB:CAA78386.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to MYB106 (myb domain protein 106), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01140.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.54171201848466 -9.22011833194797 2.20589410922435e-06 0.0101250539613398 10.1975511823358 11.4896817743973 -1.54171201848466 0.23939077948239 NA NA AT5G14920_at 9.20281375688979 9.37506536012431 6.3387187338431 6.40243529989587 9.10502929252138 9.19037150076759 4.00329702421465 4.61989709825636 5.93741812759118 6.29494345558293 9.69839445103877 10.0228178971079 9.14872834722161 9.48203024121853 10.3516169953151 9.03838107533668 8.38840448511396 10.2135289677258 7.70237152598884 0.175173039788445 0.173638271123923 0.182012685205952 0.191049069282616 0.175422528288188 0.179977888632147 0.193864495034699 0.202650359211634 0.189088604795485 0.191594298788923 0.179854914906412 0.178192179497137 0.173638271123923 0.178137660689400 0.177151162643964 0.180877121321064 0.180299367042305 0.177253669845837 0.1943232949644 5 5|0 +|/ 4827088 4827721 4827517 4826482 4827983 + gene protein_coding_gene TRUE TRUE AT5G14920.1|AT5G14920.2 gibberellin-regulated family protein|structural constituent of cell wall similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854)|similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882) 0.969721683551873 9.21926030800408 2.2078454871878e-06 0.0101318029407048 10.1969816784599 15.3736529302628 0.969721683551873 0.112313591320107 NA NA AT5G29000_at 4.85543746837471 4.60788483347195 6.92075194504965 6.78595791712371 6.6938819768842 6.9337639011497 4.88808904648623 5.12445026393259 4.03188194412216 4.87304615670406 6.2176039244385 5.91642745831116 5.77274387949285 5.9488118835305 6.02056122972537 6.36162833470895 6.95938448507825 5.77961420968959 4.34807286509812 0.207311750581457 0.199707538335743 0.204662625739599 0.204429615367226 0.205451422941866 0.220312244572342 0.209713224348511 0.203312389767399 0.218357034729593 0.208374511308815 0.200062368803696 0.202979957443631 0.209144316485549 0.210454207699412 0.200856206943876 0.199707538335743 0.207598579296279 0.201891410653971 0.207233535377292 5 5|0 -|/ 11022355 11023477 11022883.778 11022087 11024964 - gene protein_coding_gene TRUE TRUE AT5G29000.1|AT5G29000.2|AT5G29000.3 myb family transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to CDPK substrate protein 1; CSP1 [Mesembryanthemum crystallinum] (GB:AAF32350.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.845060656428266 9.1775873688385 2.30491083800466e-06 0.0105749309247654 10.1692257681510 11.1211591261908 0.845060656428266 0.075998724405227 NA NA AT5G51010_at 9.15084165369664 9.29302193546175 9.3315174582706 9.21408973123152 8.58718565363985 8.48902074757378 9.97069597435573 10.0359267195715 8.6251513522908 9.24441361150605 10.1356613435146 10.0211321492951 9.22790009314463 8.86590667683397 10.1179692125469 8.92719036253788 8.87701609831475 10.3482795723585 8.77750762195186 0.152748165168567 0.150651875497926 0.151668893851376 0.151744685752935 0.156824220335370 0.159082896942577 0.156623684559573 0.152069849306165 0.168255878753025 0.153063767746059 0.150669081670784 0.148711240980969 0.151717249968177 0.17253906042326 0.154967709388086 0.154198117509795 0.170005771952248 0.151341967492527 0.169189787343325 5 5|0 +|/ 20761862 20762535 20762117.778 20761792 20762929 + gene protein_coding_gene TRUE TRUE AT5G51010.1 rubredoxin family protein similar to rubredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G17170.1); similar to Rubredoxin-type Fe(Cys)4 protein [Medicago truncatula] (GB:ABE80208.1); contains InterPro domain Rubredoxin-type Fe(Cys)4 protein; (InterPro:IPR004039) -0.75662684257313 -9.15041511039805 2.37068653548938e-06 0.0108743391382898 10.1510262186713 18.4827822178008 -0.75662684257313 0.0378732424923831 NA NA AT5G18120_at 8.2702594688607 8.58404744500917 9.57441003989608 9.5101150046097 9.8660567630253 9.68781104610905 8.0796786888649 8.06747627907191 7.41451834388809 7.2860722199313 9.26739484760213 8.88364366232624 9.28141540899587 9.34143896647102 8.83935471784668 9.36473407176852 8.98224692729676 9.03158710651803 7.05461359545597 0.16031797105224 0.148554390445493 0.151489461025174 0.151051628538919 0.161498933723645 0.159324274149710 0.161936674865626 0.158412641484052 0.164325896020392 0.166196736327131 0.154321628019966 0.151573684913857 0.154602781434864 0.158063371355204 0.153926758198416 0.148554390445493 0.164191283724339 0.148985962781678 0.188084739145966 5 5|0 +|/ 5992475 5993645 5993320.556 5990958 5993938 + gene protein_coding_gene TRUE TRUE AT5G18120.1 ATAPRL7 (APR-LIKE 7) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. similar to ATAPRL5 (APR-LIKE 5), electron carrier/ protein disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G03860.1); similar to Thioredoxin domain 2; Thioredoxin fold [Medicago truncatula] (GB:ABE86406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.808466705861724 9.1435716174432 2.38757136049873e-06 0.0109494022592472 10.1464298440430 17.1428376836117 0.808466705861724 0.063470538796558 NA NA AT5G54490_at 4.68707191907716 5.19402141472538 6.4731053537454 6.74919551902105 6.26143106511526 6.10776614489388 2.44380253423497 2.28267590327463 3.45025460618914 2.74040614424023 3.99737103713473 3.92364625883543 4.00082386858492 3.48664797891839 4.11244621624061 3.63725550329827 3.84158555691118 3.61502929842519 3.1050798626189 0.256922499247892 0.23883081784022 0.245619491776957 0.245400255866535 0.245911577672503 0.260692443177488 0.246218153453284 0.242008712666674 0.247565525963266 0.248456296842756 0.245470423671006 0.238585549709782 0.244949807905328 0.244150357819604 0.238585549709782 0.238585549709782 0.246555649932949 0.243858909999525 0.242861849678038 5 5 + 22138687 22139043 22138866.545 22138630 22139157 + gene protein_coding_gene TRUE TRUE AT5G54490.1 PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27280.1); similar to Avr9/Cf-9 rapidly elicited protein 20 [Nicotiana tabacum] (GB:AAV92890.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.94086939250232 9.12611216947475 2.43124205310878e-06 0.0111472448135038 10.1346801129144 8.48759919133247 0.94086939250232 0.107070120353302 NA NA AT5G40690_at 4.3583837217685 4.91587183152393 7.33982014974597 7.7134903143947 6.41783238159654 6.16978770483875 3.07834984382527 2.69682331159806 2.96355514414795 2.67079989464402 3.14691518057004 2.67603057490491 3.01353808833959 3.3171910935789 3.06579955187376 3.43644485411739 3.97087162941829 3.8017474735023 2.61260128558348 0.250141248101101 0.254321353478276 0.243936100178609 0.253429656932493 0.243969623279864 0.245270428130035 0.239217915107724 0.244102987606152 0.252940029822590 0.252725394393873 0.246670383586726 0.240553255889775 0.247277578198399 0.244583859976852 0.244611061629701 0.242049095722174 0.248836025418057 0.246955670762783 0.245471276271088 5 5 + 16308069 16308336 16308180.545 16307939 16308811 + gene protein_coding_gene TRUE TRUE AT5G40690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41730.1) 1.06822397072744 9.11347652255826 2.46338685969608e-06 0.0112921653648468 10.1261557958740 8.36257128103478 1.06822397072744 0.140324929578245 NA NA AT5G48250_at 7.21417995926139 7.08488427418281 6.1970362316265 6.10330626803739 7.60810011199139 7.44262027202306 1.44476239723222 1.61035302315336 1.91616182482468 2.06416383547180 2.10093722251062 2.23201451937562 1.95539333374552 2.27297687726782 2.58093635223877 1.79973695325624 2.11610190671109 2.32786712452209 1.29140535702472 0.258014989423215 0.259511653612584 0.257771718034233 0.252849794247966 0.251697156429309 0.253542293278809 0.247248091810659 0.242391863190463 0.245868736010222 0.259476710939313 0.243714599534201 0.244556462925019 0.244033966461057 0.24610057680406 0.242391863190463 0.247061236346926 0.242391863190463 0.242391863190463 0.248863659988432 5 5 - 19578959 19580903 19579794.25 19578545 19580948 - gene protein_coding_gene TRUE TRUE AT5G48250.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 10 (COL10) [Arabidopsis Thaliana] (GB:Q9LUA9); similar to COL9 (CONSTANS-LIKE 9), zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G07650.3); similar to COL1 protein [Brassica nigra] (GB:AAN09808.1); similar to COL1 protein [Brassica nigra] (GB:AAN09810.1); similar to Os02g0724000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047975.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.772597257171276 9.10249458329907 2.49169893969262e-06 0.0114194562406113 10.1187328403079 7.55339992151045 0.772597257171276 0.0490409294529362 NA NA AT5G56100_at 7.67753019501526 7.9156714028129 7.84388000336151 7.85028550853651 8.61373546286056 8.19295862845721 7.92297821037665 8.13580349211258 8.65434813590483 8.3720695133932 8.20497739028914 8.5866538559853 8.18043909923725 8.0254731555369 8.39466677038762 8.40973759993478 8.19223905013883 7.58394852936446 8.08708156024375 0.132185602889380 0.126065784850926 0.128632714616342 0.13472561356672 0.129555864364770 0.134479111502091 0.132044725072622 0.126371395767923 0.132005955506295 0.129292065086433 0.129927758183310 0.129274922017079 0.129247566718216 0.128404541651343 0.127559641937837 0.125535552601048 0.136285070288812 0.139791050781313 0.132195462750562 5 5 + 22734409 22734747 22734571.182 22734341 22734977 + gene protein_coding_gene TRUE TRUE AT5G56100.1 glycine-rich protein / oleosin contains InterPro domain Oleosin; (InterPro:IPR000136) -0.873575238968577 -8.98406967410664 2.82044377879604e-06 0.0129232733944435 10.0378364054248 16.3033220302116 -0.873575238968577 0.0914246348040963 NA NA AT5G54500_at 10.3318867274943 10.4749174714682 11.3485018737377 11.2601827209689 11.1982984244656 11.2261993855184 8.63759950509055 8.9502445046904 9.09330263332147 9.18884207507831 10.3886183825833 10.3622613281530 10.4816796757935 10.4520447396402 10.2482478232330 10.3118006338128 10.2780124547161 10.1569073629912 9.0336316426256 0.114847767268313 0.116683820526487 0.113538235534026 0.113795359946075 0.117572104002134 0.121784967080030 0.11696404032424 0.113160240352742 0.124674358068182 0.116826413643950 0.10904501284897 0.10904501284897 0.10904501284897 0.117922262708614 0.114989753135883 0.110623508246110 0.11333500739111 0.113311594835928 0.123732322802023 5 0|5 /|+ 22142909 22143430 22143159.9 22141782 22143730 + gene protein_coding_gene TRUE TRUE AT5G54500.1 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 0.785693643608963 8.93619547552756 2.96643175541067e-06 0.0135892238715363 10.0046871120261 20.1485814935745 0.785693643608963 0.0616189863002328 NA NA AT5G40480_at 5.83601505972429 5.83406546826766 6.14618765555267 6.2685552200222 5.97082186985337 6.07927319978488 6.34178422251998 6.21815146070965 4.82688123325290 5.45361515796193 5.40101609035509 5.96236827710577 5.59547042929197 5.53109434219331 5.98708160638471 6.20128977459164 6.11742802751155 5.71162330426342 5.65721347520487 0.212421923695969 0.201717561311062 0.199955928358761 0.202161430667097 0.195487823586404 0.206884703156224 0.197942023386218 0.198923312934281 0.206700964511741 0.202396382388089 0.200602032506697 0.207974733876245 0.198778637485676 0.210343036937383 0.201317553133708 0.198536372745888 0.217051326377558 0.205328079394386 0.195487823586404 5 5|0 +|/ 16240388 16241147 16240864.3 16230589 16241210 + gene protein_coding_gene TRUE TRUE AT5G40480.1 EMB3012 (EMBRYO DEFECTIVE 3012) similar to hypothetical protein DDBDRAFT_0187985 [Dictyostelium discoideum AX4] (GB:XP_636668.1); similar to Os09g0565500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063948.1); contains InterPro domain Bacterial Ig-like, group 2; (InterPro:IPR003343); contains InterPro domain Invasin/intimin cell-adhesion; (InterPro:IPR008964) -0.734937167320645 -8.93163143071484 2.98077099162295e-06 0.0136519311416331 10.0015133038605 11.6498524880220 -0.734937167320645 0.0354759412212498 NA NA AT5G09290_at 4.98120827799318 4.98687172997469 7.0669606330738 6.72865287532754 4.75643513400546 5.12995667495042 2.08513036322833 1.93489338437327 2.2118905110028 1.97450259110366 2.39710005635028 2.44217443924027 2.56166325049871 2.45248974223133 2.41345955191707 2.53760843857927 2.72089915265870 2.66226449321991 1.90433907818007 0.311226147385538 0.312128869002132 0.322920984050863 0.330679036636750 0.306020323619485 0.311671956156433 0.302291501832842 0.307987471292859 0.308737649094460 0.300107526786646 0.298019627414758 0.304931477387055 0.304825550730650 0.302520990321292 0.309317858400996 0.304925437298743 0.298019627414758 0.300984992563012 0.298019627414758 5 5|0 +|/ 2883217 2884064 2883595.3 2882429 2884230 + gene protein_coding_gene TRUE TRUE AT5G09290.1 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative Identical to Probable SAL4 phosphatase (3'(2'),5'-bisphosphate nucleotidase 4) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase 4) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 4) (IPPase 4) (SAL4) [Arabidopsis Thaliana] (GB:Q84VY5;GB:Q9FY86); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.864483632752263 8.90404722386264 3.06904869665659e-06 0.0140531739819905 9.9822809818831 6.98561435945706 0.864483632752263 0.0910099240175604 NA NA AT5G25930_at 6.48049476600663 7.09913704649882 9.77081874730252 9.16496222899858 6.88459138738993 7.06308608678702 2.62172103874707 2.65214432396789 5.39014024057774 4.0691858792142 5.56082098152342 6.33877884650243 4.87586570164524 5.3820188976209 4.69976780147048 4.65622974247164 4.03047763791781 5.58012964444702 3.95508664253703 0.300412054670832 0.303059895347594 0.315275136029185 0.31645280006107 0.303145833080281 0.301013590203748 0.301680316346636 0.309038715191073 0.297507181590109 0.299064829748798 0.296429131102036 0.296429131102036 0.296429131102036 0.299864983228032 0.312152366896 0.296429131102036 0.299245091090422 0.307039636625668 0.297886328371643 5 5 + 9053301 9053902 9053673.909 9050797 9054146 + gene protein_coding_gene TRUE TRUE AT5G25930.1 leucine-rich repeat family protein / protein kinase family protein similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G25910.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17641.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17639.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81143.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.09148491280641 8.86628612129597 3.19451823014539e-06 0.0146245044576056 9.955812188227 11.2731104919504 1.09148491280641 0.153088964712031 NA NA AT5G66520_at 3.18677092749682 3.63813662395394 2.98743212204086 3.04531140574182 3.65797384185396 3.84776211659099 4.544799075882 4.39901900005327 4.75301415928201 5.58483614459328 5.17486942611575 6.97007399460237 5.24174558805596 5.93080105919156 6.23678728867548 6.16522293599423 5.14539082137421 5.30107251529721 5.26758939007764 0.249143195172519 0.237296143289842 0.244338183788963 0.247388437405662 0.237296143289842 0.238552102877233 0.237296143289842 0.245551166048922 0.249135507179282 0.239742149181505 0.241320354717706 0.245793302841228 0.238075954211662 0.246807990170310 0.254256355761334 0.239545479486063 0.24109957554512 0.249138768260609 0.237296143289842 5 5 + 26570368 26570938 26570715.818 26569105 26570967 + gene protein_coding_gene TRUE TRUE AT5G66520.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G06540.1); similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G48910.1); similar to Os08g0249600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061372.1); similar to Os01g0176300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042180.1); similar to Asp/Glu racemase; Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83029.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.854427842939463 -8.8657832245223 3.19622625250174e-06 0.0146291275577005 9.95545857764187 9.1496799816922 -0.854427842939463 0.0889764257503901 NA NA AT5G17270_at 3.80773825224932 3.7702243468459 4.48779337492797 4.23628686322231 4.16702543777584 4.23865500778939 3.89173216630903 4.08592232279073 3.72337171649511 4.18304669225246 3.30477363158109 3.409985674686 4.03217948140008 3.36124345012065 2.87053856320075 3.58178864132152 4.11889435613756 3.14369686973827 4.00190606342087 0.208875728675512 0.205502014739602 0.207362671238636 0.205843795780378 0.205691593333407 0.205502014739602 0.210489849090501 0.210315689705929 0.205502014739602 0.210924546417996 0.210001864533312 0.205502014739602 0.207946477438028 0.213044528835559 0.214589941923383 0.205502014739602 0.205502014739602 0.205759933315661 0.205502014739602 5 5 + 5684713 5685486 5684991.091 5679997 5685599 + gene protein_coding_gene TRUE TRUE AT5G17270.1 tetratricopeptide repeat (TPR)-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37130.1); similar to Os07g0455100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059558.1); similar to tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC65407.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.768156636907004 -8.86275871284712 3.20651949195933e-06 0.0146730331952059 9.95333128691132 7.80933675861184 -0.768156636907004 0.0567406713398295 NA NA AT5G06570_at 5.21802312674237 5.54183642143914 5.22669524653723 5.19814808697649 7.12688630949018 6.27143183402941 2.10820680099730 1.68411198893776 2.62122276325079 1.93552120855643 2.89532983708062 3.59243396091456 2.713549691401 2.89845811949417 2.76546869941764 4.83131111007026 3.83046984915165 2.82320203552543 1.20715756933411 0.282514956543052 0.293104979002481 0.275552365702403 0.289969846002845 0.289729277727590 0.282724804536589 0.272948408541275 0.270038863447174 0.275730792541597 0.273333844663266 0.274404096049806 0.270038863447174 0.270038863447174 0.270038863447174 0.274750299368063 0.272740093258403 0.271885446424051 0.270571372665757 0.278235023224409 5 5 - 2008108 2010599 2009652.273 2007601 2011042 - gene protein_coding_gene TRUE TRUE AT5G06570.1|AT5G06570.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16080.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89016.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.18242787714252 8.85950271912424 3.21764067310571e-06 0.0147207060794586 9.95104000771579 7.40445669019158 1.18242787714252 0.174547635066788 NA NA AT5G64580_at 6.63548955039137 6.57381421450488 6.62606461289277 6.48711520304178 7.00428606519068 6.74136262456263 7.47080540667084 6.92711979074676 6.89768021201818 6.97089028250913 7.03122228531154 7.4889314980068 7.09642456902075 7.36391114502169 7.67405932073978 7.70417037501511 7.3747118335079 6.94117086449194 6.83627317592565 0.168277205777603 0.164198527074282 0.171166590979785 0.168225464359117 0.163765023095837 0.16957275664017 0.169428095653499 0.171472145691667 0.172749562907656 0.167269979036846 0.166995246933249 0.163170425350825 0.168709999708639 0.188211675657492 0.174500802466991 0.170514944816928 0.172806197446818 0.172965495514876 0.163170425350825 5 0|5 /|- 25834627 25835326 25834962.667 25834318 25838756 - gene protein_coding_gene TRUE TRUE AT5G64580.1 AAA-type ATPase family protein similar to VAR1 (VARIEGATED 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT5G42270.1); similar to cell division protein [Cyanidium caldarium] (GB:NP_045094.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.911548975980105 -8.81809804834643 3.3627652399423e-06 0.0153812882074961 9.9217964849269 13.9262270801038 -0.911548975980105 0.107772016030883 NA NA AT5G47060_at 5.68692747537669 6.76940755564395 7.83565089895004 7.95444629027994 8.59716088625746 7.78839765989521 4.68011795576144 4.82808375409602 3.88219161843016 3.61873818589182 5.49199510306104 6.91733890651965 5.74059546100755 6.40197834288452 5.29069111258763 6.23403847734123 5.31840833214304 5.82741836252446 3.07733322359383 0.244816582919726 0.231862106449507 0.244120279850891 0.241787066362843 0.233737167530370 0.244723825430181 0.238804948153975 0.23570868588921 0.248339948457364 0.242971285215887 0.231862106449507 0.232133313822810 0.236112872988765 0.247221006446927 0.246508701440042 0.234359116091731 0.264037425026754 0.251526511801921 0.231862106449507 5 5 + 19134187 19134817 19134469.909 19134015 19135273 + gene protein_coding_gene TRUE TRUE AT5G47060.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to hypothetical protein 26.t00087 [Brassica oleracea] (GB:ABD65032.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 1.45789464218269 8.81161021727069 3.38614074093743e-06 0.0154848216083069 9.91719625923201 11.4819719036479 1.45789464218269 0.236133536020862 NA NA AT5G62840_at 7.60341535653488 7.73633467088538 7.78205531125695 7.8065949736902 7.72992778425627 7.97449868308729 8.58136243304442 9.05972438426506 8.5229085648153 8.4764791372714 8.67390930350369 8.84780716844184 8.65444903109715 8.98926398863602 8.90762426447122 9.1257431455782 9.01021903676027 8.60677069185976 8.32069467043722 0.140876470949948 0.134190996681252 0.150179451810362 0.136241511289882 0.134491233415992 0.134777348521059 0.139431810056260 0.136161624736228 0.146194705377330 0.134583708886919 0.130796206276085 0.130796206276085 0.134564785664080 0.136701228650171 0.141793627873933 0.130796206276085 0.143169427707881 0.137152459535935 0.132839718395291 5 5 - 25245553 25246192 25245849.364 25245451 25246909 - gene protein_coding_gene TRUE TRUE AT5G62840.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72361.1); similar to Os01g0660900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043776.1); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) -0.868275102106496 -8.78447048390224 3.48584985841117e-06 0.0159373055526559 9.8978997168754 16.6802395927783 -0.868275102106496 0.095872099465024 NA NA AT5G20150_at 7.9867907918695 8.36729567275702 7.27112147345346 7.27870400872252 8.04368245250884 7.01979416512283 7.90770491262017 7.96321467311973 6.36329204929042 6.2934600941808 6.54868287150531 7.08195618764111 7.09979799123641 6.36463334331957 5.5338320658656 6.6274031658727 6.56606910747624 5.919926167391 6.00786625943372 0.291806084259936 0.281437150135096 0.29107428316363 0.282509522984926 0.278469557235898 0.286248901216016 0.280720160282918 0.288695670867955 0.283923582199427 0.272571765954149 0.272571765954149 0.272571765954149 0.276322613755272 0.287418306481017 0.281431183037493 0.276899771673153 0.289613783436548 0.285604589776009 0.274010841957474 5 0|5 /|+ 6803036 6803293 6803173.9 6802374 6803627 + gene protein_coding_gene TRUE TRUE AT5G20150.1 SPX (SYG1/Pho81/XPR1) domain-containing protein similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26660.1); similar to Os06g0603600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058013.1); similar to IDS4-like protein [Solanum lycopersicum] (GB:CAG29394.1); contains InterPro domain SPX, N-terminal; (InterPro:IPR004331) -1.23381274178354 -8.75978481568909 3.57930806550892e-06 0.0163610171674413 9.88027349674811 14.0744520588585 -1.23381274178354 0.189277031895650 NA NA AT5G52470_at 10.6427635205773 10.7314851168782 10.9258403016484 10.8517490439431 10.8419998140932 10.8142091460858 11.1269197583918 11.2210058219761 10.6501286286883 10.6281628060969 10.5206900019241 10.3931317153704 10.5533824796113 10.3992997659894 10.5547534450455 10.3242642395178 10.7217739754865 10.2857884245203 10.5416565953198 0.0658554986250769 0.0645421159700259 0.0667115191464246 0.0659368221066351 0.0655919391143088 0.0716479019633999 0.0669020273268381 0.0659655593772493 0.0670763060980047 0.0650617766895289 0.0646685105657494 0.0653499709765022 0.0647047048463803 0.0671210512833476 0.067714704616575 0.06429067606834 0.0708636732821009 0.0655689274962531 0.06429067606834 5 5|0 +|/ 21312379 21313708 21313261.222 21311454 21313902 + gene protein_coding_gene TRUE TRUE AT5G52470.1 FIB1 (FIBRILLARIN 1) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. Identical to rRNA 2'-O-methyltransferase fibrillarin-1 (EC 2.1.1.-) (SKP1- interacting partner 7) (FIB1) [Arabidopsis Thaliana] (GB:Q9FEF8;GB:Q9FUZ8;GB:Q9SP30); similar to FIB2 (FIBRILLARIN 2) [Arabidopsis thaliana] (TAIR:AT4G25630.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692) -0.708236318176904 -8.747503475844 3.62681207216945e-06 0.0165745311698144 9.87147774686344 21.4323889901 -0.708236318176904 0.0262367905324073 NA NA AT5G25840_at 8.82165657227367 9.00168306033863 8.8777997706476 8.93072869608673 9.75356495150306 9.85644873880767 7.31683369579075 6.9912391685367 7.34733122836726 6.36626048640242 9.28153922081568 9.49023965050025 8.57419304171377 8.48263028432601 9.00926252360478 9.1753502025375 8.74172118709533 8.82161284487123 7.21185537210973 0.181550761603442 0.178124283720183 0.174724075703359 0.174724075703359 0.182453775596144 0.178074622873760 0.181681534007670 0.184170817861199 0.185220344116009 0.206758424884907 0.179484772303788 0.179601312624644 0.179559857911704 0.180556965580009 0.184846569012573 0.181604133518966 0.180664282065397 0.176550471949201 0.193990103591417 5 5 - 9010940 9011399 9011152.818 9010727 9011501 - gene protein_coding_gene TRUE TRUE AT5G25840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79770.1); similar to Os06g0554200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057846.1); similar to Os01g0199700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042311.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26169.1); contains InterPro domain Protein of unknown function DUF1677, plant; (InterPro:IPR012876) 0.781688389402544 8.73206763887789 3.68748817574045e-06 0.0168481334749581 9.86039768984658 16.6548531559445 0.781688389402544 0.0674264759745732 NA NA AT5G42420_at 7.28642176269782 7.31852433161234 7.36630900909214 7.61348070630043 9.04996825439495 8.54462828609294 5.98232713689465 5.18401038144114 4.73631132780784 4.81299402228176 7.35747412611412 7.67657017277407 7.21766656605614 7.32492818951396 7.57933758840744 6.55749647558678 6.78760315921309 7.38673355328882 4.15619656179373 0.219253648129841 0.204962393865114 0.204413479280121 0.210058409120470 0.232056135910547 0.211345195634206 0.224513486811385 0.210347217868478 0.223135956367922 0.212303046582233 0.204031604354937 0.205855201074947 0.21567440790151 0.212956812838145 0.223952100198189 0.216430516843876 0.235220494409679 0.209934758509724 0.230974984490569 5 5|0 +|/ 16986726 16987216 16987050.222 16985886 16987658 + gene protein_coding_gene TRUE TRUE AT5G42420.1|AT5G42420.2 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE94615.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853)|similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to putative transmembrane protein [Oryza sativa] (GB:AAK50365.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 1.13851183096604 8.7051850626605 3.79580004500805e-06 0.0173392146055968 9.84103407101016 13.1954471666477 1.13851183096604 0.169098631436194 NA NA AT5G14640_at 6.30889798885276 6.83394845514951 7.07981157707623 6.91246842040826 7.69443261881278 7.3778933716349 7.99648058679392 8.15922422849912 6.0597244404307 6.57521363907894 6.59079948643749 7.11011670165027 7.36589557433865 7.43762733509173 5.3471309839745 6.83517272961866 6.57870358283467 6.63114236697504 6.7071104094537 0.178329126022213 0.180647433433341 0.175285747271452 0.179947607296697 0.189023200145026 0.204558224603677 0.198179962749424 0.193766857809455 0.185742014988637 0.178494094650981 0.175285747271452 0.186144427985833 0.191273431036076 0.181582261166401 0.189779155573441 0.183411482668968 0.197622441076100 0.175303463731818 0.177396213832812 5 5|0 -|/ 4719359 4720366 4719741 4719080 4722282 - gene protein_coding_gene TRUE TRUE AT5G14640.1 protein kinase family protein Identical to Shaggy-related protein kinase epsilon (EC 2.7.11.1) (ASK-epsilon) (ASK5) [Arabidopsis Thaliana] (GB:Q8VZD5;GB:Q9LYJ6); similar to ATSK11 (Arabidopsis thaliana SHAGGY-related kinase 11), protein kinase [Arabidopsis thaliana] (TAIR:AT5G26751.1); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.1); similar to shaggy-related protein kinase theta / ASK-theta (ASK8) [Arabidopsis thaliana] (TAIR:AT4G00720.1); similar to protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alfalfa (GB:S37642); similar to Glycogen synthase kinase-3 homolog MsK-3 (GB:P51139); similar to Shaggy-like kinase [Triticum aestivum] (GB:BAF36565.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.91964752363165 -8.70253042857508 3.80668118184383e-06 0.0173851129574808 9.83911730295034 13.8876062016216 -0.91964752363165 0.113527593812773 NA NA AT5G37540_at 4.18349742817358 4.45154979254652 5.77604837647551 5.81880981998379 5.99232341280147 5.83373054375473 3.25695850951139 3.99640803154564 3.57872566698858 3.04194594003727 5.21209233048483 4.94495176940941 4.64015189631733 5.07927055364331 5.10135104114744 5.38332138122152 5.13798825151244 5.42972832092852 3.16080408671355 0.217803340066284 0.215089427457837 0.212081174510836 0.213086375372688 0.219856932683727 0.208446142885867 0.221733516837475 0.210685244563988 0.215229588970459 0.231236859976513 0.205959694111405 0.209843821472118 0.206080615869409 0.212527208236296 0.211251186302462 0.206636369855799 0.215618510132963 0.209886083178058 0.212761841387293 5 5 + 14930836 14931283 14930993 14930065 14931661 + gene protein_coding_gene TRUE TRUE AT5G37540.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G66180.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Aspartic proteinase nepenthesin-1 precursor (Nepenthesin-I) (GB:Q766C3); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.01353203026650 8.68956175254836 3.86032647447366e-06 0.0176262506824467 9.82974134054952 9.1019651598472 1.01353203026650 0.139050031329862 NA NA AT5G58480_at 4.75435676932573 5.03561312226748 3.99657756128996 4.36561750725451 4.85752183748591 5.41634875276764 5.16785770759118 5.86460032502722 5.28366280332473 6.04526481263205 5.78246325974229 6.43067395390133 5.73335647745553 5.7781656537005 7.07012794473974 5.8307260344115 5.45458230384578 6.03471981686095 6.15713846243278 0.198224665466447 0.202317578806290 0.20490471020831 0.207412790315673 0.199049336998677 0.211261044424995 0.199640395299949 0.208443089669066 0.210444298078219 0.200722671915263 0.198130252153692 0.198527975815382 0.203923388560439 0.204971605576693 0.203156006085857 0.204861862748557 0.208696279957275 0.206044115535802 0.203910811874992 5 5 - 23658460 23659023 23658726.182 23658368 23660079 - gene protein_coding_gene TRUE TRUE AT5G58480.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 9) ((1->3)-beta-glucanase 9) (Beta- 1,3-endoglucanase 9) (Beta-1,3-glucanase 9) [Arabidopsis Thaliana] (GB:Q9FGH4); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G17180.1); similar to Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95444.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.15695148302035 -8.68047458322835 3.89840326211493e-06 0.0177962108915547 9.82315972219295 10.8538320095656 -1.15695148302035 0.174178759504417 NA NA AT5G62150_at 4.84536715145904 5.44051960897114 8.48765264110678 8.40447901189327 5.64317221039499 5.31267544071212 2.37882726677816 2.83070518915234 1.98296043993358 2.63143270828967 2.64820950722662 2.77021269789504 3.41772541841008 2.16974520177634 2.19312618911619 2.3689246233113 3.96013655551691 2.32157892515355 2.29213835258044 0.305893308669217 0.313862335185122 0.330181414192286 0.337081246795995 0.316851793661073 0.314168636676869 0.300231474067741 0.301946692164720 0.303330836150080 0.302896075583215 0.305635146252964 0.301542166985945 0.310086143526801 0.305606993342524 0.297751774223115 0.303014662531571 0.297751774223115 0.298622512129434 0.297751774223115 5 5 + 24975580 24975826 24975716.909 24975467 24975995 + gene protein_coding_gene TRUE TRUE AT5G62150.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G25433.1); similar to Os10g0524300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065106.1); similar to Putative dihydrodipicolinate reductase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15285.1); similar to OSJNBa0019K04.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD41658.3); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) 1.02419195043754 8.67712978659573 3.91252074300032e-06 0.0178567446710535 9.82073470042695 7.93461709342614 1.02419195043754 0.142131099853174 NA NA AT5G48960_at 5.05517251155744 4.60938974685363 5.07552150165884 4.68218207727578 5.85090132546986 5.53808176229185 2.98809423569017 2.38300698657511 2.18734011613381 3.4430410519503 5.18516627364588 6.01494626903967 5.18586095740865 4.82342255340701 6.12244245149177 4.61918393997715 4.89972012930659 4.57940667017942 3.17259535753084 0.228902158955136 0.220124640963265 0.220124640963265 0.224631385984281 0.220124640963265 0.234061014982609 0.221994153728739 0.227427930560236 0.224581123169369 0.225318379520431 0.220124640963265 0.222451450989358 0.220124640963265 0.228329183437212 0.241989865291110 0.220291435789037 0.226674686872377 0.225734766520894 0.228065807777050 5 5|0 +|/ 19869340 19870573 19869857 19866769 19870790 + gene protein_coding_gene TRUE TRUE AT5G48960.1 5' nucleotidase family protein similar to 5' nucleotidase family protein [Arabidopsis thaliana] (TAIR:AT1G75210.1); similar to HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase [Myxococcus xanthus DK 1622] (GB:YP_635204.1); similar to Os01g0250900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042597.1); contains InterPro domain HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase; (InterPro:IPR008380) 1.08037514902809 8.66395466798248 3.96867013177274e-06 0.018109041811279 9.81116963902915 8.57934085046925 1.08037514902809 0.156461403600914 NA NA AT5G15210_at 3.82886669796578 4.31275936341995 3.05002882283078 2.96847396551891 3.79408781051298 3.61312392509115 3.97680529264072 4.46748823214593 3.39808434130061 4.05592505793911 4.23624187752314 4.98395494297097 4.62640356301839 3.74157839308785 4.98488102808821 3.98948555555766 4.22792488732295 3.87327589180476 4.50553105619183 0.24539207401875 0.229672021930725 0.239005463722830 0.237697694875623 0.232229206074448 0.230329222750015 0.229672021930725 0.234372508548138 0.241515550826391 0.238236421535601 0.230870603420255 0.239277892337756 0.232628550826712 0.240156884944104 0.236568917131395 0.229672021930725 0.233913284848071 0.235745698943633 0.240645295573458 5 5 - 4937878 4938429 4938151 4937582 4939010 - gene protein_coding_gene TRUE TRUE AT5G15210.1 ATHB30/ZFHD3 (ZINC FINGER HOMEODOMAIN 3); DNA binding / transcription factor Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family. similar to ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G39760.1); similar to Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation re (GB:ABE90495.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) -0.953377529081273 -8.66066120331531 3.98284202283174e-06 0.0181697253081584 9.80877537748505 7.91119514004857 -0.953377529081273 0.124108186233967 NA NA AT5G51980_at 5.15960104165921 5.82827383328776 7.16884158417137 7.17208990065438 6.55266573712134 6.92623348527878 5.05860811606094 4.72226475115024 4.49140719305226 3.98150488482373 6.05492802709577 6.85899661379897 6.02353292093815 6.3822751734838 6.66993876318784 6.6387932842341 6.70422030742611 6.1364676147423 3.91991682779218 0.214164152628351 0.212471000808320 0.212537013210249 0.212867549156038 0.213855742788729 0.218496263512111 0.214398996047105 0.211726648789258 0.219883169786148 0.216246969076284 0.214663375742641 0.214836751219565 0.20962635948158 0.218568233243953 0.219905661169192 0.218374588696143 0.226021532594528 0.215005081736505 0.223237907511263 5 5|0 -|/ 21130887 21131896 21131435.5 21130591 21133423 - gene protein_coding_gene TRUE TRUE AT5G51980.1|AT5G51980.2 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative|nucleic acid binding similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.03194783493003 8.65443860305845 4.00976785501355e-06 0.0182885511867168 9.80424818668029 11.3558658345077 1.03194783493003 0.144768638311257 NA NA AT5G57320_at 3.13645826660481 2.99720008313852 2.65859565689045 2.8137997112976 2.33179833767193 2.70430201243602 3.10008568081812 3.18547668471282 3.35410346328245 2.93363983748152 3.29313754467234 3.17647182919303 2.54360747930914 2.62693986124465 3.31470791552289 3.06092406941382 2.92037183099706 3.07503234923227 3.45742931104597 0.236293474955354 0.235278112803288 0.241621666032333 0.243291780181446 0.237942087437818 0.233758446283213 0.233564624620029 0.230889502926518 0.229097412456827 0.226103027293322 0.236283219305147 0.227777587050992 0.244446875942751 0.22736605491033 0.226103027293322 0.226646299786103 0.234771004597257 0.237747870486099 0.231778482285057 5 5|0 +|/ 23233993 23234750 23234303.7 23229916 23234775 + gene protein_coding_gene TRUE TRUE AT5G57320.1 villin, putative similar to VLN3 (VILLIN 3), actin binding [Arabidopsis thaliana] (TAIR:AT3G57410.1); similar to VLN2 (VILLIN 2), actin binding [Arabidopsis thaliana] (TAIR:AT2G41740.1); similar to VLN4 (ARABIDOPSIS THALIANA VILLIN 4), actin binding [Arabidopsis thaliana] (TAIR:AT4G30160.1); similar to putative villin [Oryza sativa (japonica cultivar-group)] (GB:BAD05388.1); similar to actin filament bundling protein P-115-ABP [Lilium lon (GB:BAC77209.1); similar to Villin headpiece; Gelsolin re (GB:ABE83995.1); contains InterPro domain Gelsolin; (InterPro:IPR007122); contains InterPro domain Gelsolin region; (InterPro:IPR007123); contains InterPro domain Villin headpiece; (InterPro:IPR003128) -0.794457595104991 -8.64727117246786 4.0410265123243e-06 0.0184270808961988 9.79902787489848 5.99085954447202 -0.794457595104991 0.0753397710202428 NA NA AT5G64940_at 9.72802656083442 9.79074634209417 10.0716894904209 10.0753937607675 10.0612334340872 9.6154061014427 11.4517621562997 11.3360778096382 10.8773148065055 11.0238335031988 11.2781139593996 11.4812667127955 10.9428464527278 10.9489595184453 11.3042139776283 11.4149545079656 10.8999479631027 11.1962598649852 10.9928123951039 0.101098401187634 0.0953723445934043 0.108820670297234 0.0953723445934043 0.095409398182327 0.099276263853415 0.102627162989348 0.103517001277396 0.111996672517549 0.0953723445934043 0.0991627557511703 0.09617872836263 0.0953723445934043 0.104755934021071 0.106914951694359 0.0953723445934043 0.110928951362121 0.098171468674992 0.09711692822034 5 5|0 +|/ 25969446 25970471 25969873.5 25966199 25971049 + gene protein_coding_gene TRUE TRUE AT5G64940.1|AT5G64940.2 ATATH13 (ABC2 homolog 13) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins. similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT3G07700.2); similar to Os02g0575500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047212.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD33355.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) -0.808342185479129 -8.64574134759146 4.04773249941789e-06 0.0184536124648461 9.79791285181478 21.3402789258984 -0.808342185479129 0.0804457352770493 NA NA AT5G63880_at 7.12058010658604 7.47297044772221 8.64512672600989 8.27919765544594 8.77305983509725 8.47804988154539 5.91850875102101 5.49121796314972 5.25697280307328 5.35603880189023 7.4622524581539 7.12626618360175 7.23192767025962 7.52469402389324 7.12492396099483 6.89372525412794 7.31455475267566 7.22253899361877 5.25897624878135 0.217512426957542 0.215580423782023 0.22540529796152 0.228757513507062 0.223899840453773 0.220473408612932 0.216746227366966 0.226119629238186 0.223150333041728 0.221186307948325 0.218404831861249 0.214965012630969 0.220806893660076 0.215588278869617 0.217716100435415 0.214965012630969 0.232840989565013 0.225290981437731 0.237046640473752 5 5 + 25581759 25582457 25582149.182 25580964 25582724 + gene protein_coding_gene TRUE TRUE AT5G63880.1 SNF7 family protein similar to SNF7-related [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) (GB:Q503V0); similar to Os02g0596500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047322.1); similar to hypothetical protein LOC445397 [Danio rerio] (GB:NP_001003874.1); contains InterPro domain Snf7; (InterPro:IPR005024) 0.95749805209236 8.64426967198781 4.05419495926304e-06 0.0184790206243209 9.79683994761147 13.7864754358625 0.95749805209236 0.125711001490836 NA NA AT5G49910_at 9.3084899166682 9.39448844277583 9.7218098052019 9.66443814919669 9.49819309554544 9.19571489057564 10.5854339945718 10.4537146693412 9.75502726147646 10.3119367560997 10.2291712634347 10.6130278433216 10.3353293846299 9.78759916516476 10.7283146971476 10.2051411880395 10.1541777945298 10.1359074029230 10.0084645898585 0.101423461416164 0.0993023967105856 0.101749964974077 0.100256912431723 0.100188281823642 0.0995002246157028 0.0973763268599918 0.100544130260326 0.109395350900087 0.0991493919944712 0.102359872659272 0.0973763268599918 0.0979351482607572 0.103398963653601 0.0973763268599918 0.0985482465190064 0.100918455068043 0.103904855701999 0.0980499488969225 5 5 + 20322853 20323482 20323264 20320640 20323695 + gene protein_coding_gene TRUE TRUE AT5G49910.1 cpHSC70-2 (HEAT SHOCK PROTEIN 70-7); ATP binding / unfolded protein binding heat shock protein 70 (Hsc70-7); nuclear similar to MTHSC70-1 (mitochondrial heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G37910.1); similar to mtHSC70-2 (HEAT SHOCK PROTEIN 70), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G09590.1); similar to CPHSC70-1 (chloroplast heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G24280.1); similar to Heat shock protein Hsp70 [Medicago truncatula] (GB:ABE79560.1); similar to heat shock protein 70 [Cucumis sativus] (GB:CAA52149.1); similar to heat shock 70 protein [Spinacia oleracea] (GB:AAB91471.1); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Chaperone DnaK; (InterPro:IPR012725); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) -0.755172469253948 -8.63504433152813 4.09496083583195e-06 0.0186607365288862 9.79010845091534 19.8771486012565 -0.755172469253948 0.0598304556176069 NA NA AT5G57550_at 4.24138957810927 4.64810131266610 6.06467300925298 6.22043321320804 6.2580663862724 6.77613634777145 1.23164336618348 1.41260339144314 8.67404277446867 2.88629923049243 9.00276741183844 3.12226804664262 5.85581387173754 7.23901132148025 5.92470492138734 4.14734554078227 3.83133127272938 6.87141968214163 4.74850843458063 0.249134048438278 0.253365016341100 0.249021914418456 0.256645536661079 0.254006364182113 0.261210322566335 0.262054778030919 0.267899099573968 0.257469726775454 0.249021914418456 0.252450970662258 0.252428228946309 0.251287549227254 0.249021914418456 0.253485516265270 0.249021914418456 0.250347397693378 0.25439452572192 0.249021914418456 5 5 - 23322400 23322993 23322605.909 23322114 23323647 - gene protein_coding_gene TRUE TRUE AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds xyloglucan endotransglycosylase-related protein (XTR3) Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) (XTH25) [Arabidopsis Thaliana] (GB:Q38907;GB:Q9SEB0); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to xyloglucan endotransglycosylase-related protein (GB:AAB18364.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.939367034906854 8.62864595673227 4.1234951369026e-06 0.0187866438437283 9.78543374362826 10.1994389448332 0.939367034906854 0.121239421327477 NA NA AT5G40760_at 6.70715315960987 6.85573863825258 8.46990836496347 8.48296561889765 8.26347487338409 8.00633084551519 5.97697152890657 5.72994097677145 6.75039186236735 6.38478838425448 8.29722521900413 8.4045014921467 7.31293025935274 8.20820434722191 8.3380658197217 8.23397124540033 7.49426144693206 8.50385290472529 6.47273057148115 0.185201752084199 0.186345166878676 0.182543536844801 0.184952056992634 0.181641579715868 0.188485265725514 0.186838198733254 0.199361798598374 0.209286512073425 0.197925542982333 0.181641579715868 0.185913266727839 0.185965918164259 0.185777605816179 0.189726244809832 0.185743828081757 0.193551021163746 0.190709074801458 0.189997204745776 5 5 + 16330526 16331747 16331196.364 16327976 16332002 + gene protein_coding_gene TRUE TRUE AT5G40760.1 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6); glucose-6-phosphate 1-dehydrogenase Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. Identical to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 (EC 1.1.1.49) (G6PD6) (G6PDH6) (ACG12) [Arabidopsis Thaliana] (GB:Q9FJI5;GB:Q9SUJ9); similar to G6PD5 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5) [Arabidopsis thaliana] (TAIR:AT3G27300.3); similar to glucose-6-phosphate 1-dehydrogenase cytoplasmic isoform-like [Solanum tuberosum] (GB:ABB55386.1); similar to glucose-6-phosphate dehydrogenase [Populus suaveolens] (GB:AAR26303.3); similar to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD) (GB:P37830); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) 0.77071859664578 8.62423671366692 4.1432839056613e-06 0.0188726581902872 9.78220946115412 14.6291089330447 0.77071859664578 0.0668885448249116 NA NA AT5G48500_at 3.23859201627626 2.86716392701971 3.62709871081101 3.87079496466198 4.23630793193743 3.97911202540287 2.446296686645 2.76476429980079 2.22042311500091 2.64989671020496 4.19316508392683 4.80241552644792 4.71521089514823 3.89098359263775 4.58491255380931 3.82810426931346 3.93063985915024 4.12068133195918 2.59484478706392 0.233975586915089 0.225701652506659 0.231676985949219 0.228607687847712 0.225701652506659 0.235649384937507 0.228530933539081 0.236038896319738 0.233273806959424 0.230490732113502 0.232107529113563 0.226250174519916 0.231868517396160 0.229142033098224 0.227846484712088 0.225701652506659 0.240407395454523 0.228376856463488 0.225701652506659 5 5|0 +|/ 19670583 19671218 19670798.7 19670217 19671470 + gene protein_coding_gene TRUE TRUE AT5G48500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10930.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79320.1) 0.880473376807269 8.6227987738797 4.14975961750834e-06 0.0188980052981330 9.78115745650347 6.7520924918889 0.880473376807269 0.104539634539992 NA NA AT5G06560_at 7.04471151727795 7.34962958398554 8.37943876950716 8.61907917905825 8.99040154963131 8.91440419190516 6.45991160162328 6.11485633337896 6.86363248097889 5.79128779769219 8.20719730560175 8.2559912950821 8.05669474570448 8.16140497325702 7.59623887442842 8.13941693200425 7.81797128524026 7.92817078856279 6.4408715215578 0.215182116977851 0.215963599312598 0.208270502894419 0.211452062366376 0.213610692183196 0.21373462629836 0.204936324066883 0.212152672400495 0.222836975224354 0.221712651749211 0.21431749048455 0.206778112709442 0.205003627569544 0.216106845276964 0.207785828076706 0.207489460828888 0.217315571215359 0.222706453891166 0.221785695244272 5 5 - 2003683 2004546 2004209.182 2003305 2006189 - gene protein_coding_gene TRUE TRUE AT5G06560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11850.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA98276.1); similar to Os11g0575900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068136.1); similar to Os03g0650800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050787.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.832631249977333 8.58284302080567 4.33415333640115e-06 0.0197334001406344 9.75182630077347 14.9268789449933 0.832631249977333 0.0907904356786884 NA NA AT5G15390_at 6.49905476288388 6.61565217683337 6.48689181836087 6.79342757607339 7.1117551558193 6.75990758312441 6.92375552411477 6.81820772031838 6.5837478740805 6.78108382698019 6.94205908440843 7.05907973054024 6.87490535830162 7.04908636595184 7.65988439152862 6.87311427315325 6.78365924471125 6.85675367341556 6.52076431679685 0.163749583844008 0.164004502446177 0.17850570161752 0.171370569583254 0.166360709691867 0.173097931462957 0.169551505199043 0.172612583476657 0.17820538805792 0.166906421957842 0.165743780829258 0.162599393927747 0.169676575644425 0.172256051890354 0.16805635516592 0.162599393927747 0.175456978860145 0.164803429325692 0.168321560967859 5 5|0 +|/ 4995894 4997203 4996476.5 4995148 4997406 + gene protein_coding_gene TRUE TRUE AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein similar to tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] (TAIR:AT2G19870.1); similar to putative rRNA methylase [Oryza sativa (japonica cultivar-group)] (GB:BAC83213.1); contains InterPro domain tRNA/rRNA methyltransferase, SpoU; (InterPro:IPR001537) -0.81263635425287 -8.54676243437115 4.50829851022125e-06 0.0205217748185271 9.72517441474373 13.5715064252930 -0.81263635425287 0.085218867748767 NA NA AT5G40490_at 5.24120705894303 4.99125045705324 5.36864818304556 5.46833185486284 5.0328075998406 5.4554149528224 5.32003160816087 5.11812332283802 5.82023538702715 5.6911498684536 5.95560338241889 5.54428588087892 6.06612061966543 6.14935556832115 5.93313215863226 5.72450826693033 5.98631516275586 5.97532543223686 5.82289321215563 0.154096281123081 0.160401044165261 0.154946437835830 0.151798472152316 0.152255526373664 0.156999669547168 0.152831976267368 0.161556486631728 0.152284953182605 0.152120098514986 0.152232976761082 0.155773057507424 0.163898230362485 0.155526755201617 0.151249333019922 0.153453977548115 0.152672131280639 0.163545065819965 0.152626641602455 5 5 + 16244083 16244624 16244338.091 16242604 16244937 + gene protein_coding_gene TRUE TRUE AT5G40490.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G13224.2); similar to Os02g0221500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046322.1); similar to putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa (japonica cultivar-group)] (GB:BAD17623.1); similar to Os08g0320100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061525.1); contains InterPro domain Eggshell protein; (InterPro:IPR002952); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.837121019213673 -8.54454651414674 4.51923787180876e-06 0.0205670515546017 9.72353242545522 11.0969386954585 -0.837121019213673 0.093478207115362 NA NA AT5G65260_at 9.10676217083908 9.25338809560418 9.41302847971868 9.52147596618192 9.64563152075496 9.44390897780066 9.5634760307591 9.55758616921186 9.25373232542766 9.34634728098452 9.11600366495641 9.03719797727051 9.25310247859719 9.09288248903715 9.22645822993683 9.22546162753573 9.30645185071676 9.27447912270954 9.3066377101957 0.0796145700067761 0.0820608207454303 0.0802167454989924 0.0822302758569333 0.0795062631432688 0.0810945259148913 0.0838006181849101 0.0833483599016052 0.084370961499814 0.0802361560205336 0.079667232213489 0.080452357788385 0.078879229929266 0.0841563629127794 0.0838661688383043 0.0836095265126072 0.078879229929266 0.0814844665517662 0.0805846082516229 5 5|0 -|/ 26097733 26100114 26098432.2 26097457 26100243 - gene protein_coding_gene TRUE TRUE AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G10350.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.720699254858032 -8.53353097395762 4.57404647320706e-06 0.0208119114530921 9.71536109377862 18.6850290691743 -0.720699254858032 0.0470717255314668 NA NA AT5G42940_at 6.10358497050117 6.35741257972927 7.43869938730709 7.64954686545851 7.64932757873352 7.74567431750131 5.77251742626522 5.7858861338041 4.6632821578715 5.10044695076354 7.2743622229249 7.1132465974316 7.51559676299488 7.3346778246931 6.39576571745945 7.67204847887596 7.66275585306103 5.74965811647399 5.60632995596853 0.192731109586741 0.194305178803217 0.198108483483572 0.195444016877653 0.192547093745282 0.202464888168329 0.199350461400757 0.193566520372704 0.195276293528807 0.198817586124600 0.203967328164066 0.194456946227457 0.191947456866693 0.196881024567577 0.200915551815556 0.195470516389304 0.208901116620667 0.196002725397229 0.195206430267777 5 5|0 -|/ 17233896 17234877 17234364.111 17233558 17237718 - gene protein_coding_gene TRUE TRUE AT5G42940.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G45180.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE89604.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.744879189635812 8.52481779430029 4.61790907478416e-06 0.0210068683811932 9.70888719833105 12.9193896415495 0.744879189635812 0.0595334531003058 NA NA AT5G09570_at 3.20603284531156 3.32645916181752 5.37143151472474 5.35602128134933 4.88680214192115 5.00678648507662 2.90998509558316 2.87566871585024 3.03524146000271 3.14156279017507 3.31082646298783 3.27567686332884 3.64553767515565 3.56696121077314 3.47616797296259 3.79957129834967 4.58008016951459 3.29894241755795 2.75968034870337 0.265975551851216 0.258733644321931 0.283346716405404 0.29443566405274 0.27082502106759 0.300003209499167 0.26953709305254 0.268110322364801 0.266218565684203 0.264365709998568 0.258733644321931 0.261586093336137 0.264420461987342 0.262696928542943 0.258733644321931 0.268630310101066 0.272224965342052 0.2600971996593 0.264410161712087 5 5|0 +|/ 2971017 2971941 2971447.7 2970670 2972182 + gene protein_coding_gene TRUE TRUE AT5G09570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64400.1); similar to Os03g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050926.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1); contains InterPro domain CHCH; (InterPro:IPR010625) 0.69352494988868 8.51210364402773 4.6827315247324e-06 0.0212970629744829 9.69942397952113 7.4164227594322 0.69352494988868 0.0301303176272923 NA NA AT5G61460_at 2.3771929660155 2.91012953038014 4.29262561814394 3.77329580126464 4.03721101421391 3.85753898667227 2.26991262631492 2.15426239538966 1.44842178352371 2.27070583910763 2.35352221421458 2.97296208531954 3.44690139505205 2.84760567465731 2.71402838999897 3.31141769117553 3.48634761544447 2.83464748961558 1.87722918676817 0.236265708535322 0.233272292132377 0.253915542260907 0.235402526690240 0.236466097253482 0.241182117914017 0.236299113452486 0.247974645521998 0.246200308037039 0.239767617646228 0.233272292132377 0.235494703318436 0.238482051854210 0.237263039572558 0.236919102145780 0.234743415632424 0.245785423261881 0.239199561109758 0.240261861105384 5 5|0 -|/ 24731979 24732820 24732339.778 24731302 24739166 - gene protein_coding_gene TRUE TRUE AT5G61460.1 MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding Encodes a protein closely related to the structural maintenance of chromosomes (SMC) family involved in structural changes in chromosomes. similar to structural maintenance of chromosomes (SMC) family protein [Arabidopsis thaliana] (TAIR:AT5G07660.1); similar to SMC6 protein [Oryza sativa] (GB:CAD59413.1); similar to Os09g0121000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062596.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.972990452802017 8.50725121700409 4.70773043044127e-06 0.0214060502672165 9.69580708682123 5.63971178691667 0.972990452802017 0.133978497554787 NA NA AT5G06320_at 10.7279509444320 10.8008591776828 11.7130835807083 11.7886985469910 11.2605469183813 10.9320945962667 9.31311364432494 9.39992218349419 9.7766878522363 8.8854473730496 10.6083389721059 10.6607571582236 10.4043317713277 10.8750568943302 10.34345469388 9.84934592705998 10.2826460421505 10.4689192128312 8.38548280167924 0.117470304995164 0.111291089952474 0.117855993340192 0.116757831191477 0.118410005269628 0.115835906158859 0.123774387441264 0.115003964937990 0.130000047032069 0.136839202094687 0.111290580656010 0.111290580656010 0.111532430284215 0.112001918137541 0.114476996587238 0.115490238711292 0.115667800615897 0.115790609656628 0.146864222625859 5 5 - 1931028 1931574 1931348.455 1930794 1931769 - gene protein_coding_gene TRUE TRUE AT5G06320.1 NHL3 (NDR1/HIN1-like 3) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane. similar to NHL2 (NDR1/HIN1-like 2) [Arabidopsis thaliana] (TAIR:AT3G11650.1); similar to hin1 like protein [Capsicum chinense] (GB:BAD11071.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.74716562170689 8.50006803160517 4.74500253675746e-06 0.0215707815320994 9.69044761450664 20.468273203857 0.74716562170689 0.0615378792927487 NA NA AT5G42380_at 1.85070615718265 1.75724928247613 4.11877731931793 4.14002434046678 2.27752268260896 2.20322442999418 1.10268169254154 0.552841493685976 0.97828460567765 1.19195793549142 1.07050404977282 1.29255508719501 1.23824149000010 1.2235380168844 1.10173655149735 0.94854152196986 0.890322831703776 1.56314560595213 1.12008552323777 0.249852113278728 0.249105038760229 0.279725357406011 0.280213607823863 0.250524349423122 0.258299694582905 0.243549274653553 0.243549274653553 0.251639783915625 0.243862788121083 0.246496187583480 0.243549274653553 0.247002553372912 0.24745028364453 0.243549274653553 0.243549274653553 0.246907908616717 0.246364462965391 0.243748215068673 5 5 - 16960009 16960500 16960221.364 16959804 16960594 - gene protein_coding_gene TRUE TRUE AT5G42380.1 calmodulin-related protein, putative similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G76650.1); similar to regulator of gene silencing [Lycopersicon esculentum] (GB:AAT65969.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.843701277202074 8.48626050838613 4.81754697051849e-06 0.0218957509810065 9.6801278954655 3.38180300770470 0.843701277202074 0.0974391654030028 NA NA AT5G02190_at 2.68757861839848 2.70168712843024 2.12776590271108 1.78606965071140 3.19149989187585 2.72980711241818 2.22548714507146 2.16552554144275 1.67075517830943 1.65782928064798 3.49934054345955 4.15305825386099 4.58277758523224 3.83648481597066 4.56901881832885 4.06662593982338 3.22495484769751 3.99560471459656 1.68145636755267 0.250465646589806 0.247867567227405 0.263377401248310 0.257444832529791 0.247867567227405 0.253320761328311 0.250094714799183 0.250143037523614 0.269476477764562 0.256107526413778 0.248937553306472 0.254710701181463 0.254063951301075 0.25441336650268 0.252366479693967 0.247867567227405 0.259477023650092 0.250329051297423 0.252264854667216 5 5 + 436083 436481 436273.364 435209 436895 + gene protein_coding_gene TRUE TRUE AT5G02190.1 PCS1 (PROMOTION OF CELL SURVIVAL1); aspartic-type endopeptidase/ peptidase encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT2G39710.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Peptidase aspartic, catalytic [Medicago truncatula] (GB:ABE83471.1); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.85049521070561 8.47402509581143 4.88283511666002e-06 0.0221876027701031 9.67096363068434 5.28242602323639 0.85049521070561 0.099969740796757 NA NA AT5G56350_at 9.23231866477334 9.49676504141888 10.4991515014252 10.5559559950990 10.0438839895789 9.71967547193246 8.91622441083005 8.99084955431069 7.84846049729013 7.16634815518553 9.41430084769842 9.3483837436941 9.424174672101 9.4532866729291 9.28320406698446 9.4413777898279 8.97309413918639 9.30837618490429 6.81795338623319 0.142220403883296 0.136803570733022 0.140184464200838 0.141247057986303 0.139226196641556 0.146319585857013 0.13741068755586 0.135132869467083 0.154392184080425 0.167188487109168 0.134052930467346 0.133163668115722 0.133163668115722 0.138645416197455 0.138606445331161 0.133163668115722 0.158066612855808 0.137796396879270 0.18315449490561 5 5 - 22837513 22837938 22837783.545 22837232 22839992 - gene protein_coding_gene TRUE TRUE AT5G56350.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:CAI53675.1); similar to Pyruvate kinase [Medicago truncatula] (GB:ABE78303.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42954); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 0.774097830016368 8.4580200350368 4.96968734472704e-06 0.0225772896070949 9.65894813682113 17.9860341341221 0.774097830016368 0.0741996389101723 NA NA AT5G54690_at 1.35127451883811 1.30805378665757 2.58971429170221 2.72504570672239 2.60560749963170 1.9770821251612 1.36523270384120 1.71057994843288 1.79139016972969 1.5042575423175 2.88861648581084 2.69143093401751 2.49178784295883 2.66247286730229 2.69009872954419 2.62602908638756 4.13712227768113 2.94055424691008 1.72838810463074 0.215258923935956 0.204050620398056 0.223099987277625 0.213030016439896 0.208965231246557 0.20806800296954 0.214017537868418 0.20944435524213 0.225363269774312 0.204040903288631 0.206917345016272 0.208058636426172 0.21002265745128 0.210513595619834 0.206731148492398 0.207154833218233 0.223125464792920 0.211115084251305 0.213381518385818 5 5 - 22236729 22237253 22236927.818 22236450 22239066 - gene protein_coding_gene TRUE TRUE AT5G54690.1 GAUT12/IRX8/LGT6 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to Os12g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067123.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94604.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 0.938286240628056 8.44437358610454 5.04506126103908e-06 0.0229146682476395 9.64867839647009 4.23692015481634 0.938286240628056 0.126518404115993 NA NA AT5G49520_at 4.41393781778946 3.41631935304103 5.30486285278042 4.76491038126646 6.29294920841367 6.60585179419366 2.01275960260860 2.08006008752331 2.02556020946246 1.85185442026313 2.77102738081343 3.05435250106600 2.19280156781766 3.19156197420502 3.12495198772326 2.17814100522565 2.55535602117903 3.45599759389158 2.01925253467003 0.285621181528416 0.271918225464456 0.289671834720044 0.284898404811591 0.288708431391928 0.295676998311346 0.271918225464456 0.273818553307230 0.283831638821298 0.286362109103673 0.271918225464456 0.277813265830376 0.278824730788350 0.282292951027735 0.283279246133908 0.282178705638740 0.273054430309893 0.285825349462135 0.290397346056500 5 0|5 /|+ 20109621 20110025 20109840.5 20108002 20110572 + gene protein_coding_gene TRUE TRUE AT5G49520.1 WRKY48 (WRKY DNA-binding protein 48); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 48 (WRKY DNA-binding protein 48) (WRKY48) [Arabidopsis Thaliana] (GB:Q9FGZ4); similar to WRKY23 (WRKY DNA-binding protein 23), transcription factor [Arabidopsis thaliana] (TAIR:AT2G47260.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE87685.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.25166087533533 8.43424651001472 5.10179582613324e-06 0.0231672548464710 9.64104232120408 6.75199612492978 1.25166087533533 0.20397182164599 NA NA AT5G56040_at 5.21569423074029 5.64148131211401 5.02176612233755 5.18276480357292 5.58020271609667 5.40715613268516 5.60516272294137 5.70014899749562 6.2374992459323 5.71043342829916 7.01178184509772 6.83976868770246 6.59478792958319 7.12561874424019 6.82038313744578 7.32461017138885 5.32917760900078 6.63945314119174 6.14918938249857 0.181114869095208 0.168576062313094 0.167367661047873 0.171914305032006 0.169314072565507 0.178725878777591 0.180272014963882 0.171247923773079 0.186432721557461 0.178472401242634 0.172592487498846 0.167251944858954 0.170113553341155 0.182122016933449 0.171253616163910 0.172472208612439 0.177853339375770 0.179293529642832 0.17062852148058 5 5|0 +|/ 22714949 22715601 22715326.3 22712104 22715854 + gene protein_coding_gene TRUE TRUE AT5G56040.1|AT5G56040.2 leucine-rich repeat protein kinase, putative|ATP binding / protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to putative Receptor-like protein kinase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD46328.1); similar to CLAVATA-like kinase [Triticum aestivum] (GB:CAJ19346.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210)|similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to putative Receptor-like protein kinase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD46328.1); similar to CLAVATA-like kinase [Triticum aestivum] (GB:CAJ19346.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.803142956818253 -8.42748588237044 5.14005468729268e-06 0.0233358482803088 9.63593757251571 11.7908329683061 -0.803142956818253 0.085864193790258 NA NA AT5G51100_at 5.39206167474037 5.13208450482073 4.40731896752903 4.79022460032768 4.59108184555295 4.70085691031477 4.741741236471 4.8030772211287 4.07166830594325 4.74174427079001 4.56791159322117 5.12992520073837 5.00291514394512 5.07983701019196 5.6597423948161 4.84121006883794 5.09049327699713 4.82978029631281 4.47247751216544 0.261411880509712 0.262564644090411 0.262702756411207 0.266953795432042 0.259327094057552 0.272468738050567 0.267468782506535 0.266802467645117 0.271285765456294 0.265875353957042 0.261058361060409 0.262712638300758 0.26287963856359 0.269597607068549 0.263889008667860 0.259327094057552 0.265667471037395 0.270220187190903 0.262961708417515 5 5|0 -|/ 20790980 20791874 20791329.429 20790522 20792927 - gene protein_coding_gene TRUE TRUE AT5G51100.1 FSD2 (FE SUPEROXIDE DISMUTASE 2); iron superoxide dismutase Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B. similar to FSD1 (FE SUPEROXIDE DISMUTASE 1), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT4G25100.2); similar to Fe-superoxide dismutase 1 precursor [Lotus corniculatus var. japonicus] (GB:AAS92464.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) -0.793108432133964 -8.40733158937286 5.2559630306106e-06 0.0238568161959415 9.62068604300104 9.54673432149339 -0.793108432133964 0.082997262194525 NA NA AT5G10160_at 4.64658927338317 4.90216683526464 5.67213383988701 5.27500354887861 6.45712067152491 6.58575562109095 5.25136589434146 5.28844206496757 4.78207575486534 4.87749840795299 7.6984728526271 7.90899468769057 6.41243712931673 7.66914558740339 8.12225412678647 6.83811889666964 6.43337874467452 7.38211114435129 4.36015945860571 0.272140739650158 0.266964765683602 0.280794999232995 0.262991014057846 0.259986136805666 0.268076379743982 0.263184077946685 0.258051516443122 0.271128241322820 0.268701104947429 0.262701594404445 0.261725982995666 0.266817249416378 0.260823765951933 0.27238245843097 0.258666942225785 0.265792865114497 0.260710368226042 0.263775077003661 5 5|0 +|/ 3185922 3187124 3186258.5 3185747 3187313 + gene protein_coding_gene TRUE TRUE AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] (TAIR:AT2G22230.1); similar to 4D11_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67531.1); similar to putative 3-keto-acyl-ACP dehydratase [Brassica napus] (GB:AAK60545.1); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; (InterPro:IPR010084); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (InterPro:IPR013114) 0.797377809734766 8.3943935910963 5.33185848925008e-06 0.0241959738242169 9.61086876398869 11.5005015619996 0.797377809734766 0.0849474475226602 NA NA AT5G43740_at 4.74040978449902 4.88271377534589 4.80839806028489 4.72949013117467 4.43427538968967 4.56876748862596 4.3250901640055 5.05017398516751 5.29147921893308 5.17329333995309 5.36668514118716 5.69015782490704 5.52726693053451 5.72478518438026 4.83721929043522 5.35210176049922 5.22943579514632 4.86514213889731 5.27845560382296 0.220766709373792 0.220415654165670 0.215406139460347 0.215682744874020 0.223265374740566 0.222761240348736 0.212099258558839 0.212099258558839 0.22250501221661 0.220868653975177 0.214908157833881 0.220557201168427 0.221824056573742 0.214074983853292 0.222130088101586 0.216409971460614 0.2231931728339 0.222790718846454 0.222488470993911 5 5 + 17585298 17585776 17585583.091 17581965 17586029 + gene protein_coding_gene TRUE TRUE AT5G43740.1|AT5G43740.2 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g43740 [Arabidopsis Thaliana] (GB:Q9FG90); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43730.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G15890.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.94506125581635 -8.36900916177827 5.48423353831017e-06 0.0248819675633133 9.5915465731017 9.97833583692485 -0.94506125581635 0.130689108410693 NA NA AT5G14550_at 4.89881359277148 5.14637369786428 5.805992320361 5.60514219910008 6.63646694593105 5.92250858130188 2.82940250994554 2.70258016962930 2.55716584735378 2.99183652034803 3.72181929768414 4.07443948241767 3.63551668642809 4.16887223820355 3.42267769855396 3.91045513013366 4.25620168817877 3.95415641013116 2.07616327444800 0.276318756038878 0.277969839234993 0.291041884711454 0.290023798966730 0.273900717956792 0.280612901329793 0.270347704399976 0.266716035894177 0.282917989156607 0.269050279516802 0.266716035894177 0.268578920303948 0.271306933518440 0.270791975080568 0.26879336082471 0.270841563786543 0.266716035894177 0.266873651927457 0.280510669437934 5 5|0 -|/ 4691492 4692781 4691997.6 4691013 4694058 - gene protein_coding_gene TRUE TRUE AT5G14550.1|AT5G14550.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62305.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11940.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) 0.964035217403203 8.3284079092409 5.73783133256718e-06 0.0260268029245247 9.56047387610395 8.16077960695456 0.964035217403203 0.137079310382525 NA NA AT5G54860_at 6.97533113727339 7.21896949303622 8.47499579687067 8.60165299171545 6.76651668125757 6.40920730862772 3.95671516258128 3.63912129424491 4.56776521029005 2.91908224706350 5.30527780996386 5.71085720297192 4.28919229109965 5.0799323698322 5.01689438738387 4.37155641076217 4.54756705561912 5.49931581555780 3.04010771532351 0.231263899080984 0.235596962692804 0.243428119221824 0.238748440708856 0.232906934566450 0.250000712290591 0.229052220431777 0.230017499895270 0.246070053511171 0.234137432044665 0.237795269646504 0.233665037290518 0.233156487452256 0.238693554316715 0.252453875749648 0.22875658562672 0.242995867770654 0.234798464166371 0.22875658562672 5 5|0 +|/ 22303509 22304184 22303820.4 22301807 22304432 + gene protein_coding_gene TRUE TRUE AT5G54860.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G64890.1); similar to Biopterin transport-related protein BT1 [Crocosphaera watsonii WH 8501] (GB:ZP_00518975.1); similar to Os01g0243200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042562.1); similar to Os03g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051544.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 0.820911668252575 8.31965198667283 5.79416725548818e-06 0.0262765485036389 9.55374567923597 10.7485933459298 0.820911668252575 0.0954059553215766 NA NA AT5G07030_at 0.85138363794017 0.890468908659645 0.0835576157425176 0.166557902087142 -0.153284870587483 -0.0431482066966494 0.0521478358907214 0.539489938133455 0.80058312051375 0.0760053630992385 2.09678039307490 6.71560806766936 0.973244369241952 2.09348811883053 6.90002205502164 1.83785134407914 0.5288308339437 2.22889120673395 0.982808706149551 0.254690323400762 0.252907094389295 0.260921054834099 0.257053711405115 0.257239689262423 0.252907094389295 0.253485855578750 0.262078564399250 0.26126496282091 0.268724135573354 0.266640023096071 0.302466190629815 0.258054593013794 0.262590275856529 0.303008308827384 0.256684246529034 0.256677195703127 0.271522251831140 0.257114607285638 5 5|0 -|/ 2183627 2184405 2184002.7 2183361 2185973 - gene protein_coding_gene TRUE TRUE AT5G07030.1 pepsin A similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G54400.1); similar to Peptidase A1, pepsin [Medicago truncatula] (GB:ABE83791.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.798135266949747 8.3136761993509 5.83295903491557e-06 0.0264466362643072 9.54914823311435 2.06921590106048 0.798135266949747 0.0879092338726094 NA NA AT5G48930_at 9.59790790514068 9.90780176034855 9.88259103204078 9.98197478376742 10.2053445441379 10.0365383073134 10.8953291605735 11.0725042562121 11.5248248967783 11.2700583145490 11.6367022277444 11.6587107983365 11.2835364036770 11.5221005405797 11.4669855826188 11.4230085617312 10.8595557835438 11.4664038650623 11.3490001779575 0.0720779809982453 0.0668019661255685 0.0694774255796868 0.0670472798610189 0.0661056994546333 0.067006097510808 0.0665600445724625 0.069271189889387 0.0732458065144806 0.0668871259489025 0.067943270084428 0.0652883203673214 0.0669987197112543 0.0695180148144503 0.0681124462555384 0.0652883203673214 0.0737383759224322 0.0674674404859048 0.0683375705249597 5 5 - 19853911 19854428 19854153.182 19853525 19855388 - gene protein_coding_gene TRUE TRUE AT5G48930.1 transferase family protein At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G57840.1); similar to hydroxycinnamoyl transferase [Nicotiana tabacum] (GB:CAD47830.1); similar to Alcohol acyl-transferase [Prunus mume] (GB:BAE48668.1); similar to hydroxycinnamoyl transferase [Coffea arabica] (GB:CAJ40778.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.750817549011476 -8.30553958105337 5.88623012665316e-06 0.0266822811641188 9.54288111059745 21.5954589354451 -0.750817549011476 0.0704648951208259 NA NA AT5G23390_at 6.95283678446464 6.94059304186366 8.00876426304853 8.22024212524298 8.61605577789374 8.31957288805893 6.20862037963355 6.3286430329266 5.3968800031779 5.63402119798165 7.27629117689165 7.47768180710168 7.35192264369252 7.51543868365472 7.57896205762104 7.79380236278283 7.49019658710973 7.04300996288915 5.70873590113244 0.2187174645984 0.216591284326443 0.225606077623956 0.227235674004202 0.219866599817181 0.217843199360451 0.215044752640058 0.231689889032444 0.222160725738876 0.214427480902109 0.219700660621759 0.212607986457047 0.217644539441088 0.218967005186391 0.224661327981561 0.212492279910526 0.223892670902429 0.219213207269982 0.217923869166640 5 5|0 -|/ 7870748 7871499 7871105.3 7870516 7874508 - gene protein_coding_gene TRUE TRUE AT5G23390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os04g0677400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054264.1); similar to Os02g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047529.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25093.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Protein of unknown function DUF639; (InterPro:IPR006927) 0.738725705228018 8.27924889022734 6.06198554228406e-06 0.0274729184776313 9.52257377392996 13.9598121337992 0.738725705228018 0.066390846194707 NA NA AT5G47880_at 7.68006870404752 7.72200552679477 9.34093220951017 9.42381259814596 9.44000913559088 9.07275498501991 8.36073139686576 8.23948963378597 6.0313599643264 7.16424257731517 8.45868595907441 8.44879225466626 8.75192345663547 8.5660083232793 8.4830539775727 8.80828267680363 8.85941391010284 8.03475403260206 6.55546134803669 0.166641598349326 0.162216981632846 0.167025534004905 0.166356685434261 0.163658984118273 0.174958485950619 0.163268715824844 0.163692224720801 0.177599282833830 0.171550038646414 0.170130621533318 0.169005927810831 0.167636349121917 0.160623458130889 0.165351433792432 0.160623458130889 0.169017508835204 0.182399721202978 0.176900644799143 5 5 - 19403812 19404351 19404037.182 19403326 19405788 - gene protein_coding_gene TRUE TRUE AT5G47880.1|AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones. Identical to Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to eukaryotic release factor 1 homolog (GB:AAA91169.1); similar to eukaryotic peptide chain release factor subunit 1-3-like protein [Solanum tuberosum] (GB:ABC01885.1); similar to eukaryotic peptide chain release factor subunit 1-3-like [Solanum tuberosum] (GB:ABB87106.1); contains InterPro domain eRF1 domain 2; (InterPro:IPR005141); contains InterPro domain eRF1 domain 3; (InterPro:IPR005142); contains InterPro domain eRF1 domain 1; (InterPro:IPR005140); contains InterPro domain Peptide chain release factor eRF/aRF subunit 1; (InterPro:IPR004403) 0.744392210224048 8.27812832276126 6.06960166053324e-06 0.0275013651238761 9.52170628254566 16.2275016672542 0.744392210224048 0.0688320508426703 NA NA AT5G61910_at 3.87875002946712 4.07743601692265 5.38233648963615 5.05055917243295 5.23726119503533 5.47803178057737 3.48575841946356 3.2517874543068 3.28311175322918 2.35950225343721 3.91018400517403 4.23628534217704 4.57039955659671 4.45960160739231 3.92420028138589 4.2559620438154 3.97914644465148 3.64280391720727 2.42396526366789 0.227846925375577 0.220225336859870 0.233450479292967 0.226539578631541 0.223548974945464 0.241555647984629 0.218507463344616 0.219054566466304 0.240511045310899 0.231861769310316 0.222172389474324 0.223030693700963 0.222647235626431 0.222347084073712 0.218514536057847 0.228722040472572 0.233995289798255 0.223129175261728 0.225227730494297 5 5 - 24878342 24878805 24878548.182 24877104 24881394 - gene protein_coding_gene TRUE TRUE AT5G61910.1|AT5G61910.2|AT5G61910.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32910.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94008.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22502.1); similar to Os06g0227200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057206.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain SUBFAMILY NOT NAMED (PTHR23230:SF1); contains domain no description (SM00767) 0.79502527809695 8.25991984625317 6.1948197568374e-06 0.0280625334984734 9.50758774991267 7.8858313980193 0.79502527809695 0.0886244676763847 NA NA AT5G42050_at 11.3097747624312 11.4238175906055 12.7455438766670 12.7277234309428 12.2803894456281 12.1043491060794 11.1291482037018 10.8499218328096 9.4459946438331 9.3440923093401 10.5459947601843 10.5289227551990 10.5943582136163 10.5090927356846 10.3531544615031 10.5314873168939 11.0188629492702 10.6286193579861 8.95511947913578 0.0802998280224706 0.0776380532672733 0.0782764752371923 0.07818502347009 0.0814155042027543 0.079476589262566 0.0780746931461966 0.08078514940947 0.0852064647840549 0.0824213768725288 0.0803073415864299 0.0776380532672733 0.0794944353727759 0.0789184938663244 0.0790108546249744 0.0783120961216449 0.080708660249688 0.0781873967085901 0.08934304647656 5 5|0 +|/ 16833460 16834005 16833742.25 16832717 16834529 + gene protein_coding_gene TRUE TRUE AT5G42050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27090.1); similar to N-rich protein [Glycine max] (GB:CAI44933.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain no description (SM00767); contains domain gb def: Hypothetical protein At5g42050 (PTHR23230:SF16) 0.722794058765264 8.24803782513548 6.27803605522012e-06 0.0284332252940919 9.49835187086573 21.7399403875558 0.722794058765264 0.0605149425499267 NA NA AT5G65080_at 0.864435835858436 0.762605658470202 1.52106521407739 1.17587931294219 0.978786985154578 0.984179435066766 1.26195763683188 1.25943472253319 1.88163118222504 3.52543119571598 4.62439128311575 4.49211563578304 4.16294952543937 2.7189329408505 4.01029578828715 4.59118178166161 4.44548426746291 4.56980420108874 1.97184511370357 0.534789594464447 0.535253487920831 0.534789594464447 0.534789594464447 0.534789594464447 0.542840971867659 0.540225777778995 0.542617314959885 0.534789594464447 0.541426093457834 0.538753835551242 0.54398890580179 0.536998477875518 0.534789594464447 0.534789594464447 0.537146395915708 0.536492116469498 0.535225735536842 0.534789594464447 5 5|0 +|/ 26014996 26019380 26018069.5 26014730 26019691 + gene protein_coding_gene TRUE TRUE AT5G65080.1|AT5G65080.2 MAF5 (MADS AFFECTING FLOWERING 5); transcription factor|MAF5 (MADS AFFECTING FLOWERING 5) Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported. similar to MAF4 (MADS AFFECTING FLOWERING 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65070.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.724506957608901 8.22358805543363 6.45309927326132e-06 0.0292196335093272 9.4792903566307 4.43180822937149 0.724506957608901 0.0622896157471789 NA NA AT5G18460_at 4.27317704524153 4.06309122843773 3.54629016703048 3.46354303458227 3.76420313804729 3.88239600273634 4.22941513327615 4.21551140465204 5.57455224246268 4.69147190350387 6.43070500729139 6.94915521971988 5.76939235271518 5.63571344432786 6.84464193784444 6.12678914756454 4.58938484531397 6.34172739898748 5.16932429811005 0.227802483050433 0.236847408677515 0.232078061561694 0.228879487646516 0.231018141914446 0.239076649401007 0.229240001941074 0.237869121491350 0.226357099996312 0.232263545865737 0.226357099996312 0.229732354363170 0.226357099996312 0.233164517094570 0.226357099996312 0.228894327419378 0.233568184867816 0.226357099996312 0.229552929761607 5 0|5 /|+ 6125805 6126373 6126179.1 6122902 6126723 + gene protein_coding_gene TRUE TRUE AT5G18460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23340.2); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE82132.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.689032861481077 -8.21643407765028 6.50531552165047e-06 0.0294495633665117 9.4736985001735 9.54523080287354 -0.689032861481077 0.0441699800475265 NA NA AT5G48410_at 2.34383793610745 2.17340306208055 4.91165640577888 4.77130303400578 2.27144225489873 2.64220861925155 1.18658406241959 1.29824692407575 1.41807938775610 0.97577641116893 1.16578285298700 1.11980696171183 1.12019057227569 0.91432092676057 0.890981697639668 1.25632569978207 1.77855417900401 1.66280745471454 1.46950490278071 0.237709409317089 0.247875384600477 0.262844931376433 0.253913778810966 0.253323702745385 0.247679900694195 0.243529690261298 0.240435370030148 0.240872062777853 0.239613115883121 0.256574345610053 0.243649186362075 0.240027663543782 0.242293538799038 0.241802389204949 0.239247297967281 0.251945400337008 0.239761726416824 0.247719526288076 5 5|0 +|/ 19639812 19640451 19640187.4 19637493 19640651 + gene protein_coding_gene TRUE TRUE AT5G48410.1 ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 1.3 precursor (Ligand-gated ion channel 1.3) (GLR1.3) [Arabidopsis Thaliana] (GB:Q9FH75); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.75896149660779 8.21067461542167 6.5476853011292e-06 0.0296348236729107 9.46919188490717 3.96302688416628 0.75896149660779 0.0771372420542202 NA NA AT5G44030_at 1.48592572593106 1.86758696973389 4.67657424187881 4.66237183489669 3.91365582764563 2.90276573900668 2.53569131933336 2.17554884785198 3.03864280861121 2.42841755162684 3.87116545496299 4.34335568463833 3.26104630194329 4.39939121174018 4.50266731731431 3.98286356995975 6.72808746388312 4.23189590206209 3.42231708022722 0.248367598239197 0.248689511391062 0.244795496580893 0.243099589596827 0.226586533722526 0.239992533982598 0.234131061286577 0.225779935378724 0.226980379309145 0.235256516319251 0.225779935378724 0.225779935378724 0.227382441441211 0.243395167767619 0.238056884060235 0.225779935378724 0.247396010834991 0.251633715787764 0.225779935378724 5 5 + 17736220 17736752 17736493.636 17731872 17736950 + gene protein_coding_gene TRUE TRUE AT5G44030.1 CESA4 (CELLULASE SYNTHASE 4); transferase, transferring glycosyl groups Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Identical to Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) (CESA4) [Arabidopsis Thaliana] (GB:Q84JA6;GB:Q8GZN8;GB:Q9FNC3); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to cellulose synthase 2 [Eucalyptus grandis] (GB:AAY60844.1); similar to cellulose synthase [Populus tremula x Populus tremuloides] (GB:AAT09894.1); similar to xylem-specific cellulose synthase [Populus tremuloides] (GB:AAQ08987.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150) 1.18928242160018 8.2098881944334 6.55349376268488e-06 0.0296545592761491 9.46857620231652 6.71660752668548 1.18928242160018 0.197120458236567 NA NA AT5G18640_at 7.61493356581298 7.84041806379594 9.01661277042924 9.01683293822597 10.0385819983116 9.43442316743385 7.08737184144772 6.53239405193283 7.1777361303677 7.30067972104635 9.32062891640201 8.75054329313931 8.95187320666387 9.06091886793964 8.71205933342538 9.12238462081245 8.7960147722615 8.96124960830496 7.53626643967645 0.194356787051194 0.186994094955635 0.196133320800618 0.190237517027906 0.184032694300101 0.188498570190795 0.197067509194979 0.192913897048220 0.200588050560013 0.192862211037500 0.184032694300101 0.184032694300101 0.189490880600951 0.189887324010589 0.185206962643531 0.184032694300101 0.197825173847581 0.190117840270758 0.192181005152136 5 5 + 6214458 6215470 6214962.182 6213249 6215784 + gene protein_coding_gene TRUE TRUE AT5G18640.1 lipase class 3 family protein similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18630.2); similar to Os05g0372400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055362.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.985249467450968 8.18484043593796 6.74144112354861e-06 0.0304982796429339 9.44892489258134 16.4715393035398 0.985249467450968 0.147233983207664 NA NA AT5G60870_at 3.30135367647202 3.3043573132052 3.28102683298897 3.395887782657 2.89363452763616 3.36436386108288 3.2019787987678 3.60629000608527 3.53802198876894 3.86585639978232 3.14446431240535 3.24768964682988 3.40391826495895 3.51004087186679 3.10044457846345 3.29665709620447 3.40035994593566 3.65477678658336 3.93579518253203 0.211008357919643 0.213079518042993 0.213173543041112 0.212341698355958 0.204767037883130 0.211476407589866 0.216667694393222 0.206584282231202 0.217725211708865 0.210060556056452 0.204767037883130 0.205057594544094 0.204767037883130 0.223538997584636 0.215607085295882 0.204767037883130 0.207807371245114 0.208531644283060 0.212507907604708 5 5 - 24503028 24503821 24503421.182 24502881 24505050 - gene protein_coding_gene TRUE TRUE AT5G60870.1|AT5G60870.2|AT5G60870.3 regulator of chromosome condensation (RCC1) family protein similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABD32475.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091)|similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G02510.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABD32475.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) -0.849159436524616 -8.16957623943604 6.85882916517236e-06 0.0310224843140746 9.43690964111627 6.85595416399545 -0.849159436524616 0.109210480423730 NA NA AT5G16130_at 10.0843599267705 10.2189993172152 9.82451927486572 9.74023052537096 9.95689122800085 9.84638218746922 10.6413728370399 10.5271757793564 9.61124789438415 9.93794589942106 10.2427818590832 10.8837269315966 10.1485680279301 9.87416232623405 10.9605851690740 9.98673701201029 10.2539808543018 9.9871009264144 9.85675836317018 0.116824193456554 0.110317096444613 0.119675820916097 0.113349278303277 0.107211422113598 0.120028139406647 0.111521905129834 0.115106060816256 0.124923174038983 0.117458855704826 0.112041102898858 0.108584410139931 0.115725254025305 0.119216803207279 0.120127829541309 0.113585582581125 0.114426511504911 0.111635337110985 0.116343183179472 5 5 + 5269307 5269883 5269623.727 5268424 5270159 + gene protein_coding_gene TRUE TRUE AT5G16130.1 40S ribosomal protein S7 (RPS7C) Identical to 40S ribosomal protein S7-3 (RPS7C) [Arabidopsis Thaliana] (GB:Q8LD03;GB:Q9LF15); similar to 40S ribosomal protein S7 (RPS7B) [Arabidopsis thaliana] (TAIR:AT3G02560.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96919.1); contains InterPro domain Ribosomal protein S7E; (InterPro:IPR000554) -0.676682090613893 -8.16609763058983 6.88588915947768e-06 0.0311379907791581 9.43416723162624 20.1520861048389 -0.676682090613893 0.0388836441988831 NA NA AT5G07180_at 2.48038685054318 2.58211631240192 1.98561645665331 2.43087225598703 2.33105969165236 2.33951541677293 3.20915477499614 3.74311099607658 2.47257432056304 3.06919925059219 2.14618736937625 2.73306850166335 2.56728561416239 2.17679005043988 2.96599219635011 2.13012254273074 2.05252449262479 2.54890532834670 2.94285783443703 0.223634460184149 0.213793164156339 0.221707759293839 0.215812684477544 0.221022707370248 0.216518756902129 0.222585097172088 0.215726297096498 0.221560398894098 0.214476625118037 0.214192009216566 0.219488321553189 0.220552636415563 0.219318536175157 0.217135452782083 0.212690199739273 0.216287532177709 0.211747305326960 0.210132587712175 5 5 - 2227846 2228384 2228115.909 2227572 2233418 - gene protein_coding_gene TRUE TRUE AT5G07180.1 ERL2 (ERECTA-LIKE 2); kinase Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. similar to ER (ERECTA, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1) [Arabidopsis thaliana] (TAIR:AT2G26330.1); similar to ERL1 (ERECTA-LIKE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G62230.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26312.1); similar to putative receptor protein kinase [Sorghum bicolor] (GB:AAL68842.1); similar to putative transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD44800.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.886005486687804 -8.12699246191945 7.19815709391368e-06 0.0325428682215837 9.40323016602906 5.25938908463169 -0.886005486687804 0.121604904654487 NA NA AT5G48380_at 10.2729079811206 10.5039310230796 11.0548192662742 11.1181544960635 10.7178666743805 10.4741413251502 6.70729574685739 7.25318664779324 8.88958630780233 7.6492100024159 9.25326826498594 9.68285793168275 8.53537737338617 9.17635811024835 8.90364150617965 9.0384913360899 8.76745554298937 9.35744304500619 7.56554097000243 0.152749564319722 0.150815215172786 0.150815215172786 0.153827172563813 0.150815215172786 0.153541414407661 0.172831939834293 0.168703941558819 0.157817613743856 0.166581009621810 0.150836205049106 0.150815215172786 0.159257022765286 0.152574861940632 0.151325618058779 0.150815215172786 0.152932896678965 0.150815215172786 0.172086065735116 5 5 - 19621851 19622380 19622123.909 19621315 19624285 - gene protein_coding_gene TRUE TRUE AT5G48380.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.851984800689865 8.1266912174012 7.2006212522546e-06 0.0325468080601908 9.40299107258502 18.3248582612039 0.851984800689865 0.111453372941220 NA NA AT5G45880_at 1.21183203527140 1.73884375385877 1.90105806273995 1.82518943642251 1.38064800477011 1.64032604288024 1.67510052932132 2.14847705871897 6.23119939235303 1.84697566847684 1.99362982935545 1.92214979197763 2.25652191752742 1.61317593600704 1.91590324008934 1.91141647061619 2.32301789577253 2.02525324653424 2.13238306480447 0.226470484340044 0.211743469949922 0.211743469949922 0.221665532760927 0.21289975046107 0.211743469949922 0.219162872096291 0.216373723535994 0.249965328515298 0.216656182386576 0.211743469949922 0.220075007074539 0.220818312983692 0.215355074848215 0.225375513842942 0.211743469949922 0.224296666986680 0.213002721467660 0.220484876393921 5 5 - 18627168 18628219 18627522.455 18626891 18628393 - gene protein_coding_gene TRUE TRUE AT5G45880.1 pollen Ole e 1 allergen and extensin family protein similar to pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana] (TAIR:AT4G18596.1); similar to Olee1-like protein precursor (GB:O49813); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041); contains InterPro domain Ole e 1 allergen; (InterPro:IPR006040) -0.913537390976374 -8.07300896803965 7.65464666774148e-06 0.0345913482915237 9.36019494663984 4.38951082359612 -0.913537390976374 0.131226955849671 NA NA AT5G67340_at 5.46321550064612 6.18595488268698 8.37092658371913 8.58099981904065 7.04336966609035 6.66939602306819 2.16735369437798 2.43878119452659 3.78282358833488 2.25620769889522 2.60489384971285 3.05208213418377 2.24770141662792 3.74403172503212 2.05105086529938 2.38944169619866 3.42993545185685 2.72450664627582 2.28531999657258 0.258412589200253 0.247316869245002 0.257288499970045 0.25420267523951 0.259384298377188 0.252090851612596 0.24142287910719 0.24142287910719 0.249098360153268 0.246214966667870 0.241911026170576 0.244821919130570 0.25346983679342 0.244357514439706 0.244463249463409 0.24142287910719 0.250454198577667 0.242123892423124 0.253889013756039 5 5 + 26883989 26884482 26884255.091 26881782 26884828 + gene protein_coding_gene TRUE TRUE AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G23140.1); similar to arm repeat-containing protein [Nicotiana tabacum] (GB:AAO61490.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.991877324867767 8.06485762082708 7.7262527943516e-06 0.0349072101248805 9.3536635601563 8.64261928772749 0.991877324867767 0.152838931326357 NA NA AT5G50110_at 5.5366354435525 5.58519254178766 6.15698252098017 6.07317352246671 6.59557654482215 6.63352553138344 6.28536484738144 6.4338471088743 6.2681433212478 6.7462825099906 6.92927260402 6.69233948418261 6.8971638049221 7.0724326226751 6.36788252541365 6.70496999047138 7.06787984365324 6.355460235451 6.15807963230456 0.189629625593380 0.191378763100575 0.194174726974808 0.191913634392556 0.185271532660551 0.188435704717962 0.191296669744277 0.197656649700740 0.200837472582163 0.187683190256743 0.185271532660551 0.187798882903285 0.189072710425341 0.191096662365008 0.190586923375927 0.186408218520643 0.197477141630449 0.191490406114150 0.191636833075239 5 5|0 +|/ 20391480 20393269 20392735.333 20390794 20393433 + gene protein_coding_gene TRUE TRUE AT5G50110.1 methyltransferase-related similar to Glucose inhibited division protein [Medicago truncatula] (GB:ABE82388.1); contains InterPro domain Glucose inhibited division protein; (InterPro:IPR003682) -0.658284063108582 -8.06202174076748 7.75133427739035e-06 0.0350127769309722 9.35138922019113 12.7384174043375 -0.658284063108582 0.0313744084924739 NA NA AT5G58040_at 7.50099906045182 7.43697279705793 7.84571171712303 7.98200314151661 8.29388093968321 8.1477517680906 7.4213910533301 7.46234442992127 7.76535171198494 7.91275462483759 7.96938711226775 8.012807185919 7.57376167818597 7.91997560701582 7.63385931560024 7.70050604742058 7.84117547524052 7.99846214010905 7.96244225157012 0.156852857795177 0.150319669526348 0.151065579943428 0.147487232187731 0.149975964297930 0.152073042470336 0.148007105234878 0.145051795470996 0.161896425989536 0.153279447310638 0.150596399978100 0.143593884795011 0.150986063284990 0.158534480778037 0.147250047670608 0.143593884795011 0.150164091251099 0.153602760734768 0.146381726934539 5 0|5 /|+ 23510468 23510877 23510683.5 23505974 23511226 + gene protein_coding_gene TRUE TRUE AT5G58040.1 ATFIP1[V] (ARABIDOPSIS HOMOLOG OF YEAST FIP1 [V]); RNA binding Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to putative Fip1 motif containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77079.1); contains InterPro domain Fip1; (InterPro:IPR007854) -0.662927212708103 -8.03181834501646 8.02399109961211e-06 0.0362363438058483 9.32710069267424 15.6170942049055 -0.662927212708103 0.0369971398471431 NA NA AT5G16715_at 6.00018853651972 6.18843266429336 6.5406057162263 6.35824403321147 7.14615134759418 6.3711955139861 7.25354245929973 7.08205018130072 5.65424576042706 6.90183996393628 6.13490962748159 6.81650581205319 6.49788729973033 6.27213475753143 7.38602886477178 7.38415811119146 7.27192493840332 6.67383623550178 7.25160608340834 0.190321217018190 0.188630997556246 0.182239075248212 0.184033834738658 0.189595435150166 0.194383302032339 0.191115687651124 0.192083929630293 0.192175498716111 0.18432962970171 0.195272947644812 0.187747532450956 0.189117060515193 0.190615566883724 0.187280599204463 0.187732674947225 0.195100404325315 0.192173823516586 0.182239075248212 5 5|0 +|/ 5491823 5492933 5492561.3 5485356 5493523 + gene protein_coding_gene TRUE TRUE AT5G16715.1 EMB2247 (EMBRYO DEFECTIVE 2247); ATP binding / aminoacyl-tRNA ligase similar to TWN2 (TWIN 2), ATP binding / aminoacyl-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G14610.1); similar to putative valyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC83606.1); similar to valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] (GB:ZP_01531202.1); similar to Isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri] (GB:CAL55105.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain tRNA synthetase, valyl/leucyl, anticodon-binding; (InterPro:IPR013155); contains InterPro domain Valyl-tRNA synthetase, class Ia; (InterPro:IPR002303); contains InterPro domain Aminoacyl-tRNA synthetase, class Ia; (InterPro:IPR002300); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) -0.957068695396365 -8.03016020662335 8.03925688111506e-06 0.0362972448182345 9.32576378561134 13.3211698774324 -0.957068695396365 0.144649040749751 NA NA AT5G08640_at 3.43955306575745 3.69035111543002 3.47591441297562 3.54512076657921 3.16124828141353 3.34552710831631 3.97516646637460 3.85018871888788 3.78959772215462 3.79092993989128 4.05154843997499 5.2160534255426 3.59509830625498 3.35089607703414 4.55658013016704 3.89914447291988 3.86253325847692 3.90899216811568 3.68453409637914 0.204294890842565 0.20321794142443 0.209065832889269 0.205529473559849 0.209277287752298 0.204396808298878 0.208749601828049 0.206879668964318 0.212816783945169 0.206200459947625 0.207132426300965 0.225833662760698 0.20775428556787 0.210898922220967 0.210004769933929 0.204536012279892 0.205521728181171 0.20708737494616 0.204926189718238 5 5 + 2804424 2805148 2804786.455 2803959 2805448 + gene protein_coding_gene TRUE TRUE AT5G08640.1 FLS (FLAVONOL SYNTHASE) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Identical to Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS 1) (FLS1) [Arabidopsis Thaliana] (GB:Q96330;GB:O04730;GB:O04731;GB:O04732;GB:O04830;GB:O04831;GB:O04832); similar to FLS (Flavonol synthase), flavonol synthase [Arabidopsis thaliana] (TAIR:AT5G63590.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (CitFLS) (GB:Q9ZWQ9); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.700402751789026 -8.02222612193454 8.11273833844984e-06 0.0366209008597626 9.31936173436345 7.46544692744306 -0.700402751789026 0.0592613825623036 NA NA AT5G62860_at 2.61650000720805 2.63816818487908 3.23483388007028 2.97088515480343 3.39942979773826 3.33810998244269 1.87364470469161 1.46417856316588 2.49157648257339 1.87350161885447 3.62584267208032 2.90768743174379 3.19907808662177 3.34889888412671 3.13407319193435 2.71269124870663 2.25032156876776 3.05754083357506 1.58526935521082 0.21908770320919 0.222930945252706 0.217651156121029 0.217651156121029 0.228380424886624 0.231743832062452 0.231395639908318 0.234516384411801 0.220866009066779 0.236096914486974 0.227014069539635 0.230503059550866 0.221964344863938 0.222817109720674 0.224610084682195 0.218991735016689 0.222893582172967 0.217651156121029 0.223493035074278 5 0|5 /|+ 25251312 25251754 25251486.667 25249858 25251793 + gene protein_coding_gene TRUE TRUE AT5G62860.1 F-box family protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48020.1); similar to IS10 transposase, putative [Lycopersicon esculentum] (GB:ABI34274.1); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 0.762031686090464 8.01923341261165 8.14064353924447e-06 0.0367387242926103 9.31694473671962 5.19845173032863 0.762031686090464 0.0850544008423884 NA NA AT5G47800_at 1.78275843848642 1.62387513762403 2.04808386128691 1.93478002877009 2.48253395223007 2.68754983919098 1.41704740243293 1.52959684214010 1.05172086094149 2.03790568252202 2.53663882694858 3.27160255552884 3.00135418436437 3.2267295878038 3.28897209748711 2.83006147990708 2.75517510100622 2.94591601230292 2.60437274869368 0.222296980608525 0.214022285116664 0.226322727465536 0.228340421975208 0.218904487393254 0.221989871947288 0.218754868724171 0.216044479784067 0.226529938121218 0.224745594889252 0.214398443627491 0.221855092541415 0.232473830727376 0.219296454412626 0.222021289642320 0.221729594487513 0.217905531262882 0.218992920594573 0.219027646090484 5 5|0 +|/ 19372638 19373198 19372883.5 19370902 19373526 + gene protein_coding_gene TRUE TRUE AT5G47800.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G67900.2); similar to putative non-phototropic hypocotyl 3 [Oryza sativa (japonica cultivar-group)] (GB:BAD26466.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.687223028896533 8.01843056158977 8.14814727210486e-06 0.0367644404917371 9.31629612929705 4.3783061851307 0.687223028896533 0.0527122778942635 NA NA AT5G63380_at 6.30221456529122 6.36553145563544 6.52598517693291 6.64567129489517 7.02691798918289 6.85601583907729 7.170807026135 7.33095427311838 7.27152343824547 7.07264050588277 8.0210775980942 8.0062647694142 7.53095869496909 7.87219995115478 7.50625366740877 8.28227226128771 7.15224439832057 7.80359564994316 6.78074108812822 0.194897262530355 0.185332861660764 0.196830766302689 0.200135537825147 0.185332861660764 0.186323998243281 0.187972144791575 0.187522953681159 0.197896472162013 0.187698404069658 0.190766097483417 0.196002986365346 0.187851104055140 0.198427694975638 0.196452556091584 0.185332861660764 0.196137415922110 0.196449247162432 0.188017515810471 5 5|0 -|/ 25404840 25406000 25405559.333 25404637 25407289 - gene protein_coding_gene TRUE TRUE AT5G63380.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. similar to OPCL1 (OPC-8:0 COA LIGASE1), 4-coumarate-CoA ligase [Arabidopsis thaliana] (TAIR:AT1G20510.1); similar to putative 4-coumarate:coenzyme A ligase [Oryza sativa (japonica cultivar-group)] (GB:BAD82768.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) -0.675994522185537 -8.00927436572758 8.23425506574975e-06 0.0371447246015971 9.30889297200518 14.1847588948216 -0.675994522185537 0.0468171179359523 NA NA AT5G15910_at 7.47198966521294 7.20405244773131 7.8387254458582 7.89889697082848 7.77038230369332 7.57668174176853 8.04787052892085 7.97156718148629 7.60156935478284 7.73395559459899 8.02887151116846 8.1949761235735 7.778474795188 8.24451605517487 7.8221520875472 8.24066687913403 7.64408275304869 8.00070675425956 7.43480550884753 0.127863924849490 0.123980733260797 0.125529689173712 0.127350070046819 0.123239000739977 0.126984912475356 0.125429747220696 0.120247550234983 0.137224976676789 0.122207600991023 0.123267015260181 0.119845025343449 0.128063335243183 0.12658771987779 0.126960641839521 0.119238574333793 0.123057909780394 0.126706245680627 0.122343900498913 5 5|0 +|/ 5194176 5195167 5194905 5193114 5195399 + gene protein_coding_gene TRUE TRUE AT5G15910.1 dehydrogenase-related similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT5G10730.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96868.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.699902677052332 -8.00766784859381 8.24946441524268e-06 0.0372050845127445 9.30759288991379 15.5147287970024 -0.699902677052332 0.0596356197884584 NA NA AT5G55920_at 5.48267541382349 5.42349864072555 5.42269273244118 5.79945235969178 5.13721136904291 4.60672856365787 5.95312995950276 5.34731849795465 5.45271426449426 5.50644065239826 5.70859473420748 6.36819380605843 5.45215402420102 5.58243893891879 5.86150589703772 6.18912601722277 5.7780883570809 5.75275359588801 5.63278738745851 0.205172966457146 0.202703270225776 0.217473939003311 0.212109721585171 0.202703270225776 0.206070101036053 0.215185016287643 0.207521303841699 0.214984387986390 0.209325729773218 0.215144779197334 0.206042458714755 0.212369207383005 0.206091672013266 0.207617300688713 0.208510535579956 0.218120650746662 0.218430360052053 0.210956823275856 5 0|5 /|- 22663168 22663793 22663532.25 22662709 22666673 - gene protein_coding_gene TRUE TRUE AT5G55920.1 nucleolar protein, putative similar to nucleolar protein, putative [Arabidopsis thaliana] (TAIR:AT4G26600.1); similar to Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p [Medicago truncatula] (GB:ABE89312.1); similar to Os09g0551300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063867.1); similar to putative proliferating cell nuclear protein P120 [Oryza sativa (japonica cultivar-group)] (GB:BAD12915.1); contains InterPro domain Nop2p; (InterPro:IPR011023); contains InterPro domain rRNA subunit methyltransferase; (InterPro:IPR006174); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; (InterPro:IPR001678) -0.98960512569152 -8.00497656495242 8.2750116231932e-06 0.0373120274089782 9.30541418682888 11.0802156201603 -0.98960512569152 0.154190563499446 NA NA AT5G39410_at 5.95065661680347 6.50580431675621 5.20087878872524 5.48620635336859 7.09914816943183 6.08106952255432 2.57986839815592 2.71487816925027 2.66119888011694 3.10285707564913 5.20114472356662 6.00044860689061 4.69872457201387 5.76298027305325 6.25739212328598 4.66900149360835 4.23408409227945 5.68099339067157 2.3499632748041 0.273007246555612 0.26644623294945 0.275054530108135 0.262226570143431 0.262226570143431 0.284793364552655 0.26722946783213 0.271742632794309 0.276473464528733 0.271251244811239 0.267503439571421 0.263343594420594 0.265048898661748 0.262226570143431 0.270158442768418 0.265425522831543 0.265919508882075 0.275945171940986 0.278964223067888 5 5 - 15785698 15786186 15785952.455 15785421 15787638 - gene protein_coding_gene TRUE TRUE AT5G39410.1 Identical to Probable mitochondrial saccharopine dehydrogenase At5g39410 (EC 1.5.1.9) (SDH) [Arabidopsis Thaliana] (GB:Q8LGI2;GB:Q9ZR98); similar to MGC84136 protein [Xenopus laevis] (GB:AAH74314.1); similar to MGC82870 protein [Xenopus laevis] (GB:AAH73574.1); similar to Os07g0597100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060175.1); contains InterPro domain Saccharopine dehydrogenase; (InterPro:IPR005097) 1.20316643590983 7.9950609678245 8.36987646404138e-06 0.0377314030998985 9.29737880049563 9.21119841001969 1.20316643590983 0.207976325841295 NA NA AT5G52320_at 6.394657313389 6.66111250367718 5.98469926147884 6.11741659973111 6.07883583071358 5.67473314372787 7.65620715820265 7.76753711517125 5.94244911527732 6.47249843138737 8.1696999979054 8.57113501924403 7.3622447436747 7.7723314962365 7.97702992242836 7.27260452106538 6.89380041278488 7.90082231989515 5.69794759015168 0.216048531285045 0.207771140058061 0.208793181556089 0.205121099256298 0.214628792465185 0.218464146130758 0.21408102232078 0.209867792073076 0.220972716594629 0.206710431766767 0.217073406971828 0.222408536448978 0.206653725878493 0.213820150977829 0.215497853338006 0.206078001982909 0.209505110934500 0.212224929902117 0.210168518904236 5 5 - 21262363 21262825 21262654.364 21262204 21263908 - gene protein_coding_gene TRUE TRUE AT5G52320.1 CYP96A4 (cytochrome P450, family 96, subfamily A, polypeptide 4); oxygen binding member of CYP96A similar to CYP96A3 (cytochrome P450, family 96, subfamily A, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G65340.1); similar to cytochrome P450, putative [Arabidopsis thaliana] (TAIR:AT1G57750.1); similar to Os03g0140100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048917.1); similar to Os01g0183600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042228.1); similar to Cytochrome P450 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93891.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.770239304520464 -7.99244739316075 8.39507638850725e-06 0.0378366092830022 9.29525863749153 13.4306949989746 -0.770239304520464 0.0889685456823227 NA NA AT5G26860_at 4.03718267286567 4.02565265399707 4.85089208902829 5.2321946592246 3.94343834124791 3.88357782651969 4.063853535333 4.04714773270902 3.98297539734243 4.46023783093858 3.79723640480672 3.7210450258113 4.22668597273691 3.70402710845035 4.23511956470930 3.9708813909491 3.68250776948704 4.33162987572616 4.31492938711804 0.216486936176056 0.217049562882072 0.23134786258512 0.240426832720651 0.217072491083366 0.222721216390333 0.214188612865270 0.222367370590022 0.216793740742958 0.217810325563190 0.216213926754789 0.214188612865270 0.224009313117572 0.216427769821996 0.220688629039215 0.217089557824817 0.233946275590131 0.224461900189784 0.214188612865270 5 5|0 +|/ 9455963 9456588 9456238.2 9451051 9457003 + gene protein_coding_gene TRUE TRUE AT5G26860.1 LON_ARA_ARA (Lon protease homolog gene); ATP binding / ATP-dependent peptidase/ serine-type peptidase LON protease homolog (LON_ARA) mRNA, nuclear gene encoding Identical to Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) [Arabidopsis Thaliana] (GB:P93655;GB:O04954;GB:Q8RWX1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05790.1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05780.1); similar to Lon protease homolog 2, mitochondrial precursor (GB:P93648); similar to putative ATP-dependent proteinase LON2 [Oryza sativa (japonica cultivar-group)] (GB:BAD30304.1); similar to putative LON3 protease [Oryza sativa (indica cultivar-group)] (GB:AAY21162.1); contains InterPro domain Peptidase S16, active site; (InterPro:IPR008268); contains InterPro domain Peptidase S16, lon C-terminal; (InterPro:IPR008269); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon N-terminal; (InterPro:IPR003111); contains InterPro domain Peptidase S16, ATP-dependent protease La; (InterPro:IPR004815); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.71339491268675 -7.98283955707129 8.48842157365102e-06 0.0382488276108715 9.2874568252847 8.36617036097447 -0.71339491268675 0.0668866812041093 NA NA AT5G02860_at 6.36176945908604 6.01312488709798 6.88776164097083 6.76406188759677 7.91228930670569 7.47793087731504 5.44507671621059 4.80284915421894 4.01398551124553 4.29599528063846 6.18119276573735 6.79690883952631 6.98630885355746 7.0093455519729 6.17768769934737 6.2617344089384 6.54562303160313 6.07871646321149 4.09859377609209 0.231558800968533 0.232125077412119 0.240941827585183 0.238599256704668 0.237533638001780 0.245265439529016 0.237485895204528 0.235654189137939 0.245202561532246 0.241064863271301 0.238163557534765 0.234736703255675 0.231558800968533 0.237494622647694 0.235963731849126 0.231558800968533 0.235007643494122 0.237022778927575 0.239273905995170 5 5 + 656077 656512 656324.727 654100 656559 + gene protein_coding_gene TRUE TRUE AT5G02860.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G18940.1); similar to Os07g0590600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060154.1); similar to Os05g0275000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055073.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22929.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.966201990730042 7.98267226819875 8.49005677386736e-06 0.0382488276108715 9.2873208733905 11.7785486033480 0.966201990730042 0.148663742155368 NA NA AT5G06980_at 9.1298138517714 9.39702043316655 9.41846303001548 9.71100438938002 10.0691051506914 9.95627344854614 10.3929645236195 10.3961794481371 9.95309440837975 10.3292960695172 10.4266013260762 10.3427767501416 10.5404324416470 9.99292330684482 9.90490534010228 10.394699656405 10.0529704740652 9.95584303152799 10.5487794288871 0.108521163464152 0.102799303879083 0.106043455457835 0.10405145288385 0.100159019724268 0.102146836784468 0.102070099695586 0.101096001247483 0.114921019756788 0.098788513370129 0.104680336518676 0.100224283885999 0.101188611227682 0.103116007429356 0.108709012434333 0.098788513370129 0.101096405143749 0.0994806925170701 0.098788513370129 5 5|0 +|/ 2168043 2169072 2168561.9 2167537 2169392 + gene protein_coding_gene TRUE TRUE AT5G06980.1|AT5G06980.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12320.1) -0.721566370172194 -7.96035934106675 8.71123981474119e-06 0.0392354241255943 9.26915417140356 20.0480783726389 -0.721566370172194 0.0712937188153143 NA NA AT5G10790_at 5.46518646029115 6.35687866929282 7.40079705246798 7.41918540409771 7.45523607810267 7.34987196166308 4.93108421117457 4.83600631280354 3.93558823284106 4.04530590452488 5.71936815309076 6.07350008379306 5.62807171355329 5.74796685823451 5.64319954693046 5.7992235714787 5.58440973877039 5.4704227074038 3.28267939752457 0.269284014762417 0.264915733951966 0.284431737466233 0.268959460871684 0.267847315757585 0.268453932216836 0.266695759116591 0.265607520355218 0.274519543266908 0.277492401363799 0.262142773064460 0.264640182735847 0.272887295442894 0.268691568141196 0.267284891118829 0.262142773064460 0.268305614798265 0.283007408387717 0.276930970895959 5 5 + 3411969 3412535 3412202.182 3410540 3412634 + gene protein_coding_gene TRUE TRUE AT5G10790.1 UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G57990.1); similar to Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Zinc finger, UBP-type [Medicago truncatula] (GB:ABE86624.1); contains InterPro domain Zinc finger, UBP-type; (InterPro:IPR001607); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.991325089664195 7.95512951887432 8.76397751898327e-06 0.0394641907679817 9.26488653192359 11.1331781728802 0.991325089664195 0.156286138361772 NA NA AT5G63010_at 2.22390472871433 2.53520280779415 3.66851111601703 3.85245872828698 4.35029423330121 3.9571380307191 2.22698475230705 2.20505583817978 1.87085491094885 2.01133746572579 2.57543030337984 3.02399883079437 2.94068928345572 2.56074456401897 2.62444996744644 2.68479830039326 2.68919434156147 2.62888531950989 2.44574456064512 0.196683733458372 0.201675906568182 0.192845962390639 0.203889113161700 0.201176359204587 0.215049742992640 0.205256765559843 0.194076471028160 0.195716343796164 0.201068259063298 0.192845962390639 0.195753833714813 0.197577341734783 0.192845962390639 0.200211710027664 0.198165879521903 0.201842641936448 0.198470508888310 0.195060259016416 5 5 + 25299648 25300157 25299926.455 25298940 25300402 + gene protein_coding_gene TRUE TRUE AT5G63010.1 WD-40 repeat family protein similar to COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) [Arabidopsis thaliana] (TAIR:AT2G32950.1); similar to Os04g0507900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053266.1); similar to PREDICTED: similar to CG3184-PA [Danio rerio] (GB:XP_692484.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.776030148680206 7.9490874116624 8.82533618139278e-06 0.0397316634886303 9.25995148939874 5.54011186754491 0.776030148680206 0.0925148185276349 NA NA AT5G67570_at 3.97487148034864 3.82585855138679 4.51148728443782 4.63844297665454 5.43866449412893 5.13302374820498 3.22696238191302 3.36610526867348 2.25022613012623 2.61511199202334 3.41172030286319 3.63765889820077 4.01637081721326 3.59971987193922 3.85416475167398 3.53772548986725 3.89162479339823 3.29879225639938 2.01718020000188 0.228217671417797 0.220710440087204 0.219711930868706 0.215851468868204 0.219656522570317 0.22469743431152 0.215488220344490 0.215488220344490 0.224951669720779 0.239786615885295 0.215488220344490 0.216949669342041 0.220449443175044 0.217149825623734 0.217335722272102 0.21934001769145 0.226038900500360 0.222867095267284 0.224374104948978 5 5 + 26971404 26971974 26971713.727 26969551 26972073 + gene protein_coding_gene TRUE TRUE AT5G67570.1 EMB1408 (EMBRYO DEFECTIVE 1408); binding similar to EMB2279 (EMBRYO DEFECTIVE 2279), binding [Arabidopsis thaliana] (TAIR:AT1G30610.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE85862.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.710495684354551 7.94076356766273 8.91062762875482e-06 0.0401067349570254 9.25314476236757 7.23949948409097 0.710495684354551 0.0672690010878169 NA NA AT5G48880_at 9.24361953087498 9.19035860090976 9.08501300943952 8.99791059254982 9.20617870620607 8.88209474066574 9.71260729285324 9.57402353993596 8.50684135343872 9.0278384895727 9.25883654922573 9.44961063013648 9.09580695750613 9.22943549258539 8.93256731367385 8.95813400436639 8.96758529282906 9.20198212883736 8.31963046428256 0.127948796270196 0.126843727750795 0.126338045571258 0.131424203409773 0.121285774502091 0.133655228885637 0.128756846947261 0.131249287248689 0.124623466171831 0.129043924978253 0.125299294556399 0.126045810149435 0.123263817450994 0.121233093623819 0.120197715362710 0.124776825959277 0.138581595348846 0.132073615555655 0.126820483972571 5 0|5 /|- 19831816 19832529 19832155.333 19831628 19835123 - gene protein_coding_gene TRUE TRUE AT5G48880.1|AT5G48880.2|AT5G48880.3 KAT5/PKT1/PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 1, PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. Identical to 3-ketoacyl-CoA thiolase 5, peroxisomal precursor (EC 2.3.1.16) (Beta- ketothiolase 5) (Acetyl-CoA acyltransferase 5) (Peroxisomal 3-oxoacyl- CoA thiolase 5) (KAT5) [Arabidopsis Thaliana] (GB:Q570C8;GB:O65339;GB:Q9S774); similar to PED1 (PEROXISOME DEFECTIVE 1), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT2G33150.1); similar to 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis sativus] (GB:CAA47926.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to 3-ketoacyl-CoA thiolase 5, peroxisomal precursor (EC 2.3.1.16) (Beta- ketothiolase 5) (Acetyl-CoA acyltransferase 5) (Peroxisomal 3-oxoacyl- CoA thiolase 5) (KAT5) [Arabidopsis Thaliana] (GB:Q570C8;GB:O65339;GB:Q9S774); similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative [Arabidopsis thaliana] (TAIR:AT1G04710.1); similar to PED1 (PEROXISOME DEFECTIVE 1), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT2G33150.1); similar to 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis sativus] (GB:CAA47926.1); similar to acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit (GB:S72532); similar to Thiolase [Medicago truncatula] (GB:ABE94567.1); contains InterPro domain Thiolase; (InterPro:IPR002155) -0.701333101556787 -7.93109844611272 9.01078157548485e-06 0.0405485170896818 9.24522954693446 18.1138998676342 -0.701333101556787 0.0635040897692658 NA NA AT5G15880_at 5.58365825178163 5.83067844787209 6.1688595561429 5.98948842066786 6.63521697366917 6.33474441640933 5.94757627943026 5.66384984118141 6.23872569451483 6.56464904184944 6.71091949681764 6.6998331798962 5.8801604629731 6.6706695438584 6.66992575497034 6.25037195974492 5.99629049373899 6.67472443623294 6.42286400039507 0.226765566332796 0.203946810014305 0.212927143434524 0.225478688050059 0.207923642049342 0.224482986942996 0.203946810014305 0.215933517014137 0.233105828844198 0.210484172636992 0.204492959004514 0.210703641011441 0.208863677656015 0.212942148142493 0.20425443752489 0.20780844488361 0.2139505708083 0.213104371084355 0.209701669635992 5 5|0 +|/ 5186473 5187425 5187024.6 5185781 5187709 + gene protein_coding_gene TRUE TRUE AT5G15880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32240.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96950.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) -0.76170869421348 -7.9055103132567 9.28185580393399e-06 0.041759069261899 9.22421352861244 12.4456881042021 -0.76170869421348 0.088913295427883 NA NA AT5G57050_at 5.27993036193545 5.45874181719661 7.4694757729878 7.44558601953824 7.45167154916817 7.25245286079387 6.34489205000762 6.14690586211052 4.96827079337837 5.35058532827641 6.90489546445738 6.96723450785817 7.57332200612658 6.52627738858599 6.50687524408985 7.20031506546136 8.03394400608034 7.22617892651787 5.43837887905102 0.194030989406823 0.187416963007399 0.186335424098276 0.188828157495982 0.194820339669527 0.189846127757483 0.190582087981563 0.187570341701865 0.207759163090281 0.192314641423352 0.187307371300030 0.1840166412154 0.192198948688214 0.187648765861516 0.185784413729516 0.187662863487944 0.194870510176995 0.1840166412154 0.196803569689613 5 5 + 23105703 23106409 23106032.091 23104461 23106853 + gene protein_coding_gene TRUE TRUE AT5G57050.1 ABI2 (ABA INSENSITIVE 2); protein phosphatase type 2C Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. Identical to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2) (ABI2) [Arabidopsis Thaliana] (GB:O04719); similar to ABI1 (ABA INSENSITIVE 1), calcium ion binding / protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT4G26080.1); similar to Os05g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056498.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:AAT39223.1); similar to Os01g0583100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043415.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.685166403944098 7.88195001943168 9.53924913698425e-06 0.0429075426181552 9.20478483176543 12.7911030332418 0.685166403944098 0.0577678327975694 NA NA AT5G02260_at 6.16890001075749 6.15491020564905 7.20388104351828 7.34705373586599 6.48601155217513 6.47282271122033 5.14813052449836 5.72238451969507 2.53097092907981 3.12747904403614 4.90355161925986 5.56511549269344 4.90416980019771 4.99605549671409 4.72611715071484 6.05595196615277 5.45504883540382 4.46308793122543 2.52221378990382 0.279187851306946 0.267796394487413 0.291744115647347 0.284051311848994 0.273405096106243 0.287406889870067 0.285474041071654 0.2699123688951 0.29345164438786 0.269104675092842 0.272872498968917 0.274947877154491 0.281022580499747 0.292993416735057 0.28464500530803 0.275332863763992 0.291492775680702 0.287671104330577 0.286378348422289 5 5 + 463525 464773 464112.182 463156 465244 + gene protein_coding_gene TRUE TRUE AT5G02260.1 ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A9 precursor (AtEXPA9) (Alpha-expansin-9) (At-EXP9) (AtEx9) (Ath-ExpAlpha-1.10) (EXPA9) [Arabidopsis Thaliana] (GB:Q9LZ99); similar to ATEXPA3 (ARABIDOPSIS THALIANA EXPANSIN A3) [Arabidopsis thaliana] (TAIR:AT2G37640.1); similar to expansin [Pyrus communis] (GB:CAH18933.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) 0.798251667683655 7.87890493684644 9.57307499687558e-06 0.0430501182609495 9.20226825783764 10.2682743916984 0.798251667683655 0.102473458283249 NA NA AT5G55280_at 8.32072718478203 8.04949886757858 8.10195820583701 7.99048637672176 8.07370427402246 7.92543322046254 8.71842472058885 8.32222907578078 7.90601350607062 8.3722584629563 8.78929441065341 8.9887640283279 8.52773245181941 8.7920797223003 9.16681244644386 8.8904038668481 8.65541874216225 8.37485893829237 8.43099975558447 0.119804575037379 0.119661986624381 0.114648724754896 0.11730948838542 0.116342697734246 0.128108168971947 0.114574654870186 0.115511636781468 0.127154127023554 0.126438973163270 0.117117381880325 0.113126459819551 0.120431690566368 0.119492261968594 0.120618851610121 0.113126459819551 0.121671230119968 0.119627284989222 0.120572501070734 5 5 - 22437987 22438736 22438240.727 22437881 22439875 - gene protein_coding_gene TRUE TRUE AT5G55280.1 FTSZ1-1 (FtsZ1-1); structural molecule Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. Identical to Cell division protein ftsZ homolog, chloroplast precursor (FTSZ) [Arabidopsis Thaliana] (GB:Q42545;GB:Q9FLN6); similar to FTSZ2-2 (FtsZ2-2), structural molecule [Arabidopsis thaliana] (TAIR:AT3G52750.1); similar to cpFtsZ (GB:AAA82068.1); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Cell division protein FtsZ; (InterPro:IPR000158); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280) -0.758906577588013 -7.87178016778363 9.65272675309867e-06 0.0433986594819316 9.19637515858927 16.6926049827516 -0.758906577588013 0.0890762741515545 NA NA AT5G23550_at 6.0609017415132 5.94118677740865 7.42382457080121 7.06549172498853 7.72764777391789 7.47062231921314 6.38160306532988 6.10359298799818 3.89237821184538 4.14563000591027 6.89747472666048 6.36886112565307 6.65567097394118 6.30264429046539 6.57507566868519 6.39325610972432 6.32227476855853 6.23416289519082 4.46110859379555 0.259157601234925 0.259157601234925 0.259157601234925 0.271154686581566 0.259157601234925 0.276626217016691 0.262180286337789 0.267491158403797 0.279129431202793 0.271484237086008 0.266591893561603 0.261577850459151 0.260794748224130 0.271904423263786 0.260104380575853 0.259157601234925 0.269430432338779 0.27812780036074 0.273750360689155 5 5|0 -|/ 7939960 7941373 7940475.778 7939614 7941631 - gene protein_coding_gene TRUE TRUE AT5G23550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24170.1); similar to PREDICTED: similar to SFT2 domain containing 2 [Bos taurus] (GB:XP_583469.1); similar to Os02g0564500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047161.1); similar to SFT2 domain containing 2 [Mus musculus] (GB:NP_663487.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 0.768567704342852 7.87129237906079 9.65820613665676e-06 0.0434136365842721 9.19597144263984 12.0893837903348 0.768567704342852 0.0925617272581081 NA NA AT5G40990_at 1.11365124024655 0.911206899796394 3.45539799422331 3.56321318428084 1.93516796461623 1.22476479512605 0.404360132839292 0.425808263721389 0.554754925982815 0.822883064605896 0.780581777613618 0.505493490700353 0.659584834413736 0.729485640715085 0.87581102717595 0.536231238258232 0.96765060007592 0.75783273417742 0.542614530813936 0.240930389445159 0.233077731041498 0.265424222186883 0.264163814224596 0.237165018713063 0.2365252815001 0.232198709008108 0.233721307510698 0.234498048575247 0.232198709008108 0.233249108650702 0.238231061045975 0.235869581249245 0.232815560997402 0.233833795318044 0.240577296952391 0.235970095673683 0.242485387237651 0.243676899908455 5 5 + 16436879 16437590 16437267.364 16436148 16437628 + gene protein_coding_gene TRUE TRUE AT5G40990.1 GLIP1 (GDSL LIPASE1); carboxylic ester hydrolase Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. similar to GLIP2 (GDSL-motif lipase 2), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT1G53940.1); similar to lipase SIL1 [Brassica rapa subsp. pekinensis] (GB:AAM47031.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087); contains InterPro domain Lipolytic enzyme, G-D-S-L, active site; (InterPro:IPR008265) 0.883094044584155 7.86426718090417 9.73749468938925e-06 0.0437603011341153 9.19015348686849 2.31253035520234 0.883094044584155 0.129240730293658 NA NA AT5G22860_at 6.47688334249583 6.44833659789638 8.3979451784383 7.65011290040087 5.61522176820525 5.12569957054091 7.10365591289465 6.63386925270504 5.02058298297573 5.3812900998674 4.32961911986182 5.66089215406721 5.96613749203788 5.19860226737041 5.14437386862137 5.09060440142701 6.38434192675478 4.85543741996475 5.79295719401984 0.221399270760454 0.235235102962552 0.229302876838115 0.230588165606009 0.224724974048272 0.219222096968159 0.226487699657258 0.217653531013317 0.222315774074142 0.218554670125824 0.228293810657125 0.216195976484484 0.216195976484484 0.225875042018248 0.223879541972055 0.219805438282636 0.223178789239741 0.220663760850585 0.219957511642247 5 5 - 7639914 7641487 7641081.727 7639321 7642987 - gene protein_coding_gene TRUE TRUE AT5G22860.1|AT5G22860.2 serine carboxypeptidase S28 family protein similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT5G65760.1); similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT2G24280.1); similar to hypothetical protein LOC780095 [Xenopus tropicalis] (GB:NP_001072639.1); similar to Os01g0767100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044360.1); similar to Os06g0647400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058206.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S28; (InterPro:IPR008758) -1.05004832883354 -7.85996428248714 9.78640552247778e-06 0.0439703200124927 9.18658670549675 12.0449794855559 -1.05004832883354 0.174810868699942 NA NA AT5G09730_at 2.64240564651720 2.59817196878703 4.14598781498182 4.49784452596897 5.44423861790386 5.31962233145205 3.88629406766238 4.6432359078541 4.08815365270344 4.0311769915523 6.43963243038081 6.30372182198862 5.72397770425723 4.79318405296396 6.33355912749764 6.8914836442698 5.96391551758386 6.16187700613429 3.54396362354236 0.287265260946642 0.267495729892095 0.275292517787626 0.262214666243446 0.258546633737834 0.264591462670281 0.258282790833958 0.262407215652017 0.263575238060329 0.259814159044870 0.267213311180699 0.260349363516615 0.259593619790996 0.269879334028024 0.270316167056014 0.258308336767255 0.260009743152055 0.261380048680906 0.267834759146346 5 0|5 /|- 3015363 3015866 3015620.3 3015248 3018263 - gene protein_coding_gene TRUE TRUE AT5G09730.1 BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing O-glycosyl compounds encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] (GB:CAJ65922.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to LEXYL1 [Solanum lycopersicum] (GB:BAC98298.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.940730965180993 7.84448851811868 9.96452317873327e-06 0.0447606381188698 9.17373761980517 9.12931694467454 0.940730965180993 0.146254221923856 NA NA AT5G23310_at 6.49783840203116 6.15215226214228 5.71606407967287 5.67517842703723 6.33011833598553 6.08571386969113 5.70349366862383 5.62699025538809 4.37785481890841 4.49168892825599 4.59298480323702 5.54764146911168 4.70489983981964 4.62570658028451 6.12351466747776 5.05861838769586 5.40486536002907 4.68921253398996 4.75525980447247 0.228329427607175 0.224342329319406 0.227158134054320 0.223785435397480 0.224996740944482 0.234436806833146 0.224485988857537 0.222205270819804 0.22570005400329 0.229407055921980 0.223614746901605 0.221845482349375 0.223886828802863 0.225915526357606 0.230321113312572 0.226599359992214 0.229747079332984 0.223735306157836 0.226571190918184 5 0|5 /|+ 7851472 7852211 7851857.375 7850526 7852535 + gene protein_coding_gene TRUE TRUE AT5G23310.1 FSD3 (FE SUPEROXIDE DISMUTASE 3); iron superoxide dismutase Fe superoxide dismutase similar to FSD2 (FE SUPEROXIDE DISMUTASE 2), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT5G51100.1); similar to FeSOD [Gossypium hirsutum] (GB:ABA00456.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) -0.719084082139755 -7.84147473587098 9.99961580648988e-06 0.044908274586946 9.17123156511049 10.7909594821138 -0.719084082139755 0.0747862210488547 NA NA AT5G01460_at 4.74411250139338 5.23991208957146 6.07490146702322 6.21409520931414 6.77921034215374 6.33524602033111 5.30994415884631 5.5057283683656 5.61133328858949 4.24504161031978 7.15178859051445 7.61625457842544 7.2450192054156 7.86525162155254 7.95079311930737 7.07992338720137 6.42064658990644 7.15657017616387 4.28844975744116 0.282613636863679 0.287497725791337 0.294565961780744 0.294079294010125 0.279448138089786 0.294921752251654 0.284949740546025 0.282791290794330 0.281361675422268 0.298686013260763 0.278320244022755 0.281489279061267 0.294839938617987 0.288550068196454 0.285342009392321 0.278320244022755 0.317637101602212 0.281322071245579 0.289153215196850 5 5|0 +|/ 188837 189818 189310.7 186693 190456 + gene protein_coding_gene TRUE TRUE AT5G01460.1 LMBR1 integral membrane family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08930.1); similar to LMBR1 integral membrane family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD44783.1); similar to Os06g0128200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056670.1); contains InterPro domain LMBR1-like conserved region; (InterPro:IPR006876) 0.852520037374225 7.79447132347333 1.05645534006969e-05 0.0474348447691289 9.13198598154447 11.7882549999637 0.852520037374225 0.122444937781455 NA NA AT5G34940_at 2.96764224287656 2.90544412828524 5.54146757309343 6.13285563332483 2.95842739914096 2.6945847970154 2.15863231339608 2.11044717132429 2.55844265034346 2.60409617757468 2.77109271650181 4.08291428429144 2.82873506699231 3.69913153476873 3.39243118590603 3.11754396543207 3.46201639651393 2.54822688705868 2.15220590721335 0.198941471430666 0.210033332184207 0.241282605737225 0.233957867344264 0.201452788486526 0.201678943643548 0.203372839731988 0.207092966634610 0.207546287927303 0.201499185593931 0.202039207229678 0.201730335002992 0.201190989962949 0.197025823873177 0.207185171718462 0.201389638503009 0.197101898672019 0.203091765887416 0.196801699214307 5 0|5 /|- 13253145 13253894 13253473.444 13253059 13256069 - gene protein_coding_gene TRUE TRUE AT5G34940.1|AT5G34940.2|AT5G34940.3 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07830.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 0.821479750927196 7.79264620043643 1.05871737010167e-05 0.0475258227438639 9.13045598072094 6.27169253217057 0.821479750927196 0.112889908268684 NA NA AT5G52070_at 5.63392136787249 6.054822635934 6.17059831126305 6.19027707006564 6.2645248131824 5.49688112957832 4.70940059235541 4.43188990507154 4.57168520394027 4.52674391995473 3.31765321008676 3.84777974691375 3.90922009369898 3.95516683529046 2.95511875197980 3.82000948743178 4.07605704990088 3.66456337448669 4.85105145184625 0.255863080613789 0.250848843010778 0.260764123753111 0.243618304467471 0.250332310862324 0.253449938941051 0.259113384931797 0.243165801991983 0.244662082568769 0.243165801991983 0.245448346549184 0.245964104240119 0.247874410470857 0.251474673624785 0.249325838368379 0.243165801991983 0.243165801991983 0.243216886906576 0.243165801991983 5 5|0 +|/ 21181008 21181908 21181334.222 21178537 21182251 + gene protein_coding_gene TRUE TRUE AT5G52070.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G42670.1); similar to Os05g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054599.1); contains InterPro domain Agenet; (InterPro:IPR008395) -0.979618851783879 -7.78149308089898 1.07265451474175e-05 0.04814073462161 9.12109636205615 9.79055094181738 -0.979618851783879 0.158968784456165 NA NA AT5G06610_at 4.59538281424585 5.16306307800925 5.5698069942376 5.98448241928787 6.10882935035029 5.50670335895183 2.64877195307604 2.20669899469033 2.69734213694816 2.28766190323608 3.77674939970776 3.99283164427616 3.37909227115045 4.14859315842098 4.24881992869349 3.71154647488429 3.95830587571745 3.8901044356097 2.4294881901309 0.238023958094617 0.232391334624112 0.236477928591575 0.242042686716025 0.234169599235930 0.232391334624112 0.238842731088234 0.251479505410155 0.247135050303074 0.241371630424515 0.232391334624112 0.234149487139954 0.237219949741472 0.237407859218001 0.234538259468388 0.232391334624112 0.23621100856369 0.242211579197117 0.242708940612442 5 5|0 +|/ 2031737 2033571 2033093.2 2029898 2033724 + gene protein_coding_gene TRUE TRUE AT5G06610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27690.1); similar to Lipase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99131.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) 1.04729520160826 7.76146067878893 1.09818740421944e-05 0.0492756688273262 9.10424226163034 7.90284377468742 1.04729520160826 0.177514004734314 NA NA